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GSE53960: rat RNA-Seq transcriptomic Bodymap

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ISMARA results GSE53960: rat RNA-Seq transcriptomic Bodymap

ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.

All motifs sorted by activity significance

Motif name Z-value Associated genes Profile Logo
Mef2d_Mef2a 6.11 small profile SeqLogo of Mef2d_Mef2a
Hnf1b 6.05 small profile SeqLogo of Hnf1b
Rfx3_Rfx1_Rfx4 5.86 small profile SeqLogo of Rfx3_Rfx1_Rfx4
Mef2c 5.08 small profile SeqLogo of Mef2c
Hnf1a 5.04 small profile SeqLogo of Hnf1a
Hnf4a 4.87 small profile SeqLogo of Hnf4a
Ybx1_Nfya_Nfyb_Nfyc_Cebpz 4.86 small profile SeqLogo of Ybx1_Nfya_Nfyb_Nfyc_Cebpz
Pou5f1 4.67 small profile SeqLogo of Pou5f1
Wrnip1_Mta3_Rcor1 4.47 small profile SeqLogo of Wrnip1_Mta3_Rcor1
Snai1_Zeb1_Snai2 4.28 small profile SeqLogo of Snai1_Zeb1_Snai2
Elf1_Elf2_Etv2_Elf4 4.14 small profile SeqLogo of Elf1_Elf2_Etv2_Elf4
Pou2f2_Pou3f1 4.08 small profile SeqLogo of Pou2f2_Pou3f1
Irf2_Irf1_Irf8_Irf9_Irf7 4.08 small profile SeqLogo of Irf2_Irf1_Irf8_Irf9_Irf7
Rest 3.87 small profile SeqLogo of Rest
Hoxb7 3.83 small profile SeqLogo of Hoxb7
Rfx2_Rfx7 3.61 small profile SeqLogo of Rfx2_Rfx7
E2f1 3.45 small profile SeqLogo of E2f1
Foxj3_Tbl1xr1 3.21 small profile SeqLogo of Foxj3_Tbl1xr1
Spi1 3.16 small profile SeqLogo of Spi1
Esrrb_Esrra 3.14 small profile SeqLogo of Esrrb_Esrra
Tead3_Tead4 3.09 small profile SeqLogo of Tead3_Tead4
Nfia 3.04 small profile SeqLogo of Nfia
Pparg_Rxrg 3.01 small profile SeqLogo of Pparg_Rxrg
E2f2_E2f5 2.98 small profile SeqLogo of E2f2_E2f5
Tbp 2.98 small profile SeqLogo of Tbp
Nrf1 2.78 small profile SeqLogo of Nrf1
Hnf4g 2.70 small profile SeqLogo of Hnf4g
Rela_Rel_Nfkb1 2.66 small profile SeqLogo of Rela_Rel_Nfkb1
Etv3_Erf_Fev_Elk4_Elk1_Elk3 2.64 small profile SeqLogo of Etv3_Erf_Fev_Elk4_Elk1_Elk3
Runx2_Bcl11a 2.63 small profile SeqLogo of Runx2_Bcl11a
Ets1 2.58 small profile SeqLogo of Ets1
Smad1 2.58 small profile SeqLogo of Smad1
Mecp2 2.56 small profile SeqLogo of Mecp2
Junb_Jund 2.55 small profile SeqLogo of Junb_Jund
Spic 2.54 small profile SeqLogo of Spic
Klf16_Sp8 2.51 small profile SeqLogo of Klf16_Sp8
Spib 2.50 small profile SeqLogo of Spib
Tfdp1_Wt1_Egr2 2.50 small profile SeqLogo of Tfdp1_Wt1_Egr2
Yy1_Yy2 2.49 small profile SeqLogo of Yy1_Yy2
Cebpb 2.48 small profile SeqLogo of Cebpb
Taf1 2.46 small profile SeqLogo of Taf1
Hcfc1_Six5_Smarcc2_Zfp143 2.43 small profile SeqLogo of Hcfc1_Six5_Smarcc2_Zfp143
Klf4_Sp3 2.39 small profile SeqLogo of Klf4_Sp3
Srf 2.37 small profile SeqLogo of Srf
Zfx_Zfp711 2.35 small profile SeqLogo of Zfx_Zfp711
Id4 2.23 small profile SeqLogo of Id4
Chd1_Pml 2.23 small profile SeqLogo of Chd1_Pml
Smarcc1_Fosl1 2.22 small profile SeqLogo of Smarcc1_Fosl1
Ebf1 2.22 small profile SeqLogo of Ebf1
Etv1_Etv5_Gabpa 2.21 small profile SeqLogo of Etv1_Etv5_Gabpa
Hic1 2.20 small profile SeqLogo of Hic1
Myog_Tcf12 2.20 small profile SeqLogo of Myog_Tcf12
Erg 2.20 small profile SeqLogo of Erg
Gata3 2.17 small profile SeqLogo of Gata3
Tcf4_Mesp1 2.15 small profile SeqLogo of Tcf4_Mesp1
Maz_Zfp281 2.14 small profile SeqLogo of Maz_Zfp281
Pou1f1 2.14 small profile SeqLogo of Pou1f1
Runx1 2.07 small profile SeqLogo of Runx1
Nfic_Nfib 2.06 small profile SeqLogo of Nfic_Nfib
Stat2 2.04 small profile SeqLogo of Stat2
Foxa2_Foxa1 2.04 small profile SeqLogo of Foxa2_Foxa1
Nfatc2 2.04 small profile SeqLogo of Nfatc2
Sp1 2.01 small profile SeqLogo of Sp1
Gcm2 1.98 small profile SeqLogo of Gcm2
Epas1_Bcl3 1.98 small profile SeqLogo of Epas1_Bcl3
Mef2b 1.96 small profile SeqLogo of Mef2b
Nfil3_Tef 1.93 small profile SeqLogo of Nfil3_Tef
Gata2_Gata1 1.91 small profile SeqLogo of Gata2_Gata1
Mybl1 1.89 small profile SeqLogo of Mybl1
Esr1 1.89 small profile SeqLogo of Esr1
Ahr 1.88 small profile SeqLogo of Ahr
Zbtb33_Chd2 1.84 small profile SeqLogo of Zbtb33_Chd2
Rad21_Smc3 1.83 small profile SeqLogo of Rad21_Smc3
Ppara 1.80 small profile SeqLogo of Ppara
Ezh2_Atf2_Ikzf1 1.77 small profile SeqLogo of Ezh2_Atf2_Ikzf1
Cux1 1.76 small profile SeqLogo of Cux1
Nr2f2 1.76 small profile SeqLogo of Nr2f2
Cebpe 1.75 small profile SeqLogo of Cebpe
Tgif1_Meis3 1.74 small profile SeqLogo of Tgif1_Meis3
Klf1 1.74 small profile SeqLogo of Klf1
Max_Mycn 1.74 small profile SeqLogo of Max_Mycn
Myb 1.65 small profile SeqLogo of Myb
Klf6_Patz1 1.62 small profile SeqLogo of Klf6_Patz1
Onecut1_Cux2 1.61 small profile SeqLogo of Onecut1_Cux2
Hic2 1.60 small profile SeqLogo of Hic2
Dmc1 1.60 small profile SeqLogo of Dmc1
Gtf2i_Gtf2f1 1.59 small profile SeqLogo of Gtf2i_Gtf2f1
Nr1i3 1.58 small profile SeqLogo of Nr1i3
Sox2 1.57 small profile SeqLogo of Sox2
Esr2 1.57 small profile SeqLogo of Esr2
Nr1h4 1.56 small profile SeqLogo of Nr1h4
E2f4 1.55 small profile SeqLogo of E2f4
Nr1i2 1.54 small profile SeqLogo of Nr1i2
Cebpa_Cebpg 1.54 small profile SeqLogo of Cebpa_Cebpg
Myod1 1.53 small profile SeqLogo of Myod1
Pbx1_Pbx3 1.52 small profile SeqLogo of Pbx1_Pbx3
Hoxa4 1.50 small profile SeqLogo of Hoxa4
Tal1 1.49 small profile SeqLogo of Tal1
Dlx1 1.48 small profile SeqLogo of Dlx1
Nr5a2 1.47 small profile SeqLogo of Nr5a2
Zbtb18 1.47
small profile SeqLogo of Zbtb18
E2f7 1.46 small profile SeqLogo of E2f7
Hoxa2 1.45
small profile SeqLogo of Hoxa2
Irf3 1.44 small profile SeqLogo of Irf3
Fosl2_Bach2 1.42 small profile SeqLogo of Fosl2_Bach2
Egr1 1.41 small profile SeqLogo of Egr1
Mybl2 1.40 small profile SeqLogo of Mybl2
Nkx3-2 1.38 small profile SeqLogo of Nkx3-2
Meox2 1.38 small profile SeqLogo of Meox2
Zfp110 1.38 small profile SeqLogo of Zfp110
Tbx21 1.37 small profile SeqLogo of Tbx21
Nr2f1_Nr4a1 1.37 small profile SeqLogo of Nr2f1_Nr4a1
Hoxa1 1.37 small profile SeqLogo of Hoxa1
Elf3 1.36 small profile SeqLogo of Elf3
Tlx2 1.36 small profile SeqLogo of Tlx2
Klf12_Klf14_Sp4 1.36 small profile SeqLogo of Klf12_Klf14_Sp4
Pax5 1.36 small profile SeqLogo of Pax5
Stat5a 1.36 small profile SeqLogo of Stat5a
Scrt1 1.35 small profile SeqLogo of Scrt1
Zfp691 1.33 small profile SeqLogo of Zfp691
Ebf3 1.33 small profile SeqLogo of Ebf3
Elf5 1.32 small profile SeqLogo of Elf5
Creb1 1.32 small profile SeqLogo of Creb1
En1 1.31 small profile SeqLogo of En1
Sox21 1.31 small profile SeqLogo of Sox21
Foxp1_Foxj2 1.30 small profile SeqLogo of Foxp1_Foxj2
Zfp384 1.30 small profile SeqLogo of Zfp384
Trp53 1.30
small profile SeqLogo of Trp53
Neurod1 1.29 small profile SeqLogo of Neurod1
Nhlh1 1.29 small profile SeqLogo of Nhlh1
Atf6 1.29 small profile SeqLogo of Atf6
Plag1 1.28 small profile SeqLogo of Plag1
Tead1 1.28 small profile SeqLogo of Tead1
Bptf 1.28 small profile SeqLogo of Bptf
Gfi1_Gfi1b 1.26 small profile SeqLogo of Gfi1_Gfi1b
Zbtb14 1.26
small profile SeqLogo of Zbtb14
Prop1 1.25 small profile SeqLogo of Prop1
Gli3_Zic1 1.24 small profile SeqLogo of Gli3_Zic1
Stat4_Stat3_Stat5b 1.24 small profile SeqLogo of Stat4_Stat3_Stat5b
Nfe2_Bach1_Mafk 1.23 small profile SeqLogo of Nfe2_Bach1_Mafk
E2f6 1.23 small profile SeqLogo of E2f6
Nfat5 1.22 small profile SeqLogo of Nfat5
Pitx2_Otx2 1.22 small profile SeqLogo of Pitx2_Otx2
Fos 1.22 small profile SeqLogo of Fos
Rarg 1.22 small profile SeqLogo of Rarg
E2f8 1.21 small profile SeqLogo of E2f8
T 1.20 small profile SeqLogo of T
Foxc2 1.19 small profile SeqLogo of Foxc2
Pou2f3 1.19 small profile SeqLogo of Pou2f3
Zfp524 1.19 small profile SeqLogo of Zfp524
Tcf3 1.19 small profile SeqLogo of Tcf3
Sox3_Sox10 1.18 small profile SeqLogo of Sox3_Sox10
Meis1 1.18 small profile SeqLogo of Meis1
Ascl2 1.17 small profile SeqLogo of Ascl2
Xbp1_Creb3l1 1.16 small profile SeqLogo of Xbp1_Creb3l1
Rfx5 1.15 small profile SeqLogo of Rfx5
Ctcfl_Ctcf 1.15 small profile SeqLogo of Ctcfl_Ctcf
Zfp148 1.15 small profile SeqLogo of Zfp148
Tfeb_Usf1_Srebf1_Usf2_Bhlhe41_Srebf2 1.15 small profile SeqLogo of Tfeb_Usf1_Srebf1_Usf2_Bhlhe41_Srebf2
Grhl1 1.15 small profile SeqLogo of Grhl1
Tfap2c 1.13 small profile SeqLogo of Tfap2c
Cpeb1 1.13 small profile SeqLogo of Cpeb1
Maf_Nrl 1.12 small profile SeqLogo of Maf_Nrl
Meis2 1.12 small profile SeqLogo of Meis2
Atf3 1.11 small profile SeqLogo of Atf3
Nkx2-3 1.10 small profile SeqLogo of Nkx2-3
Zbtb16 1.10 small profile SeqLogo of Zbtb16
Crem_Jdp2 1.10 small profile SeqLogo of Crem_Jdp2
Smad3 1.10 small profile SeqLogo of Smad3
Foxa3 1.09 small profile SeqLogo of Foxa3
Pou6f2_Pou4f2 1.09 small profile SeqLogo of Pou6f2_Pou4f2
Hoxc9 1.09 small profile SeqLogo of Hoxc9
Nfatc1 1.09 small profile SeqLogo of Nfatc1
Myf6 1.09 small profile SeqLogo of Myf6
Arntl_Tfe3_Mlx_Mitf_Mlxipl_Tfec 1.09 small profile SeqLogo of Arntl_Tfe3_Mlx_Mitf_Mlxipl_Tfec
Hivep1 1.08 small profile SeqLogo of Hivep1
Hoxb5 1.07 small profile SeqLogo of Hoxb5
Gata4 1.07 small profile SeqLogo of Gata4
Pitx3 1.07 small profile SeqLogo of Pitx3
Zbtb3 1.07 small profile SeqLogo of Zbtb3
Nkx2-9 1.06
small profile SeqLogo of Nkx2-9
Dbp 1.06 small profile SeqLogo of Dbp
Hoxb8_Pdx1 1.06 small profile SeqLogo of Hoxb8_Pdx1
Nr2e3 1.05 small profile SeqLogo of Nr2e3
Scrt2 1.05 small profile SeqLogo of Scrt2
Zfhx3 1.04 small profile SeqLogo of Zfhx3
Nkx6-1_Evx1_Hesx1 1.04 small profile SeqLogo of Nkx6-1_Evx1_Hesx1
Hsf2 1.04 small profile SeqLogo of Hsf2
Tcf21_Msc 1.04 small profile SeqLogo of Tcf21_Msc
Sox6_Sox9 1.03 small profile SeqLogo of Sox6_Sox9
Jun 1.02 small profile SeqLogo of Jun
Tfap4 1.02 small profile SeqLogo of Tfap4
Zic4 1.01 small profile SeqLogo of Zic4
Foxf1 1.01 small profile SeqLogo of Foxf1
Zfp784 1.01
small profile SeqLogo of Zfp784
Bcl6 1.01 small profile SeqLogo of Bcl6
Hmga1 1.01 small profile SeqLogo of Hmga1
Hey1_Myc_Mxi1 1.01 small profile SeqLogo of Hey1_Myc_Mxi1
Mafb 1.01 small profile SeqLogo of Mafb
Smad4 1.00 small profile SeqLogo of Smad4
Sox18_Sox12 1.00 small profile SeqLogo of Sox18_Sox12
Pou2f1 1.00 small profile SeqLogo of Pou2f1
Tbr1 1.00 small profile SeqLogo of Tbr1
Hoxb13 1.00 small profile SeqLogo of Hoxb13
Nfe2l2 0.99 small profile SeqLogo of Nfe2l2
Rxra 0.99 small profile SeqLogo of Rxra
Obox1 0.99
small profile SeqLogo of Obox1
Vsx2_Dlx3 0.98 small profile SeqLogo of Vsx2_Dlx3
Tfap2a 0.98 small profile SeqLogo of Tfap2a
Zbtb6 0.98 small profile SeqLogo of Zbtb6
Rorc_Nr1d1 0.98 small profile SeqLogo of Rorc_Nr1d1
Foxd1 0.97 small profile SeqLogo of Foxd1
Tbx5 0.97 small profile SeqLogo of Tbx5
Hoxa13 0.96 small profile SeqLogo of Hoxa13
Aire 0.96 small profile SeqLogo of Aire
Alx4 0.96 small profile SeqLogo of Alx4
Obox6_Obox5 0.96
small profile SeqLogo of Obox6_Obox5
Sox14 0.96 small profile SeqLogo of Sox14
Hmga2 0.95 small profile SeqLogo of Hmga2
Foxd2 0.95 small profile SeqLogo of Foxd2
Rreb1 0.95 small profile SeqLogo of Rreb1
Zic2 0.95 small profile SeqLogo of Zic2
Creb3 0.95 small profile SeqLogo of Creb3
Atf7_E4f1 0.95 small profile SeqLogo of Atf7_E4f1
Tgif2_Tgif2lx1_Tgif2lx2 0.94 small profile SeqLogo of Tgif2_Tgif2lx1_Tgif2lx2
Zfp652 0.94 small profile SeqLogo of Zfp652
Tbx19 0.94 small profile SeqLogo of Tbx19
Pou4f1_Pou6f1 0.94 small profile SeqLogo of Pou4f1_Pou6f1
Hsf4 0.94 small profile SeqLogo of Hsf4
Arid3a 0.93 small profile SeqLogo of Arid3a
Zfp263 0.93 small profile SeqLogo of Zfp263
Gsx1_Alx1_Mixl1_Lbx2 0.93 small profile SeqLogo of Gsx1_Alx1_Mixl1_Lbx2
Foxi1_Foxo1 0.92 small profile SeqLogo of Foxi1_Foxo1
Gata5 0.92 small profile SeqLogo of Gata5
Sox17 0.91 small profile SeqLogo of Sox17
Ar 0.91 small profile SeqLogo of Ar
Glis2 0.90 small profile SeqLogo of Glis2
Nkx2-2 0.90 small profile SeqLogo of Nkx2-2
Irx5 0.90 small profile SeqLogo of Irx5
Zkscan3 0.90 small profile SeqLogo of Zkscan3
Sox1 0.90
small profile SeqLogo of Sox1
Pitx1 0.90 small profile SeqLogo of Pitx1
Nr1h2 0.89 small profile SeqLogo of Nr1h2
Figla 0.89 small profile SeqLogo of Figla
Nanog 0.89 small profile SeqLogo of Nanog
Nfe2l1_Mafg 0.89 small profile SeqLogo of Nfe2l1_Mafg
Ikzf2 0.89 small profile SeqLogo of Ikzf2
Hbp1 0.89 small profile SeqLogo of Hbp1
Ptf1a 0.89 small profile SeqLogo of Ptf1a
Hlf 0.88 small profile SeqLogo of Hlf
Ubp1 0.88 small profile SeqLogo of Ubp1
Nfkb2 0.88 small profile SeqLogo of Nfkb2
Atf4 0.87 small profile SeqLogo of Atf4
Hoxa10 0.87 small profile SeqLogo of Hoxa10
Fli1 0.87 small profile SeqLogo of Fli1
Six6 0.87 small profile SeqLogo of Six6
Atf1_Creb5 0.87 small profile SeqLogo of Atf1_Creb5
Foxp2_Foxp3 0.86 small profile SeqLogo of Foxp2_Foxp3
Foxf2 0.86
small profile SeqLogo of Foxf2
Foxc1 0.86 small profile SeqLogo of Foxc1
Tcf7_Tcf7l2 0.86 small profile SeqLogo of Tcf7_Tcf7l2
Ddit3 0.86 small profile SeqLogo of Ddit3
Lhx5_Lmx1b_Lhx1 0.85 small profile SeqLogo of Lhx5_Lmx1b_Lhx1
Rxrb 0.85 small profile SeqLogo of Rxrb
Hdx 0.85 small profile SeqLogo of Hdx
Pbx2 0.85 small profile SeqLogo of Pbx2
Vdr 0.84 small profile SeqLogo of Vdr
Zbtb4 0.84 small profile SeqLogo of Zbtb4
Stat1 0.84 small profile SeqLogo of Stat1
Prdm1 0.84 small profile SeqLogo of Prdm1
Stat6 0.84 small profile SeqLogo of Stat6
Crx_Gsc 0.83 small profile SeqLogo of Crx_Gsc
Rhox11 0.83 small profile SeqLogo of Rhox11
Homez 0.82 small profile SeqLogo of Homez
Gcm1 0.82 small profile SeqLogo of Gcm1
Sin3a 0.82 small profile SeqLogo of Sin3a
Etv6 0.82 small profile SeqLogo of Etv6
Onecut2_Onecut3 0.82 small profile SeqLogo of Onecut2_Onecut3
Tlx1 0.82 small profile SeqLogo of Tlx1
E2f3 0.82 small profile SeqLogo of E2f3
Hoxa9_Hoxb9 0.81 small profile SeqLogo of Hoxa9_Hoxb9
Prrx1_Isx_Prrxl1 0.81 small profile SeqLogo of Prrx1_Isx_Prrxl1
Tfcp2 0.81 small profile SeqLogo of Tfcp2
Sp2 0.81 small profile SeqLogo of Sp2
Zbtb7a 0.81 small profile SeqLogo of Zbtb7a
Nr2c1 0.81 small profile SeqLogo of Nr2c1
Tbx15 0.80 small profile SeqLogo of Tbx15
Nfix 0.80
small profile SeqLogo of Nfix
Lhx2_Hoxc5 0.80 small profile SeqLogo of Lhx2_Hoxc5
Creb3l2 0.79 small profile SeqLogo of Creb3l2
Hsf1 0.79