GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Tbx21 Links NCBI RGD Ensembl	ENSRNOG00000009427	T-box 21

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Tbx21	rn6_v1_chr10_-_85049331_85049331	0.37	1.0e-11	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr5_-_138239306 Show fit	39.24	ENSRNOT00000039305	Ermap Links NCBI RGD Ensembl Show fit	erythroblast membrane-associated protein
chr13_+_82369493 Show fit	38.13	ENSRNOT00000003733	Sell Links NCBI RGD Ensembl Show fit	selectin L
chr6_-_138550576 Show fit	37.49	ENSRNOT00000075284	AABR07065645.1 Links NCBI RGD Ensembl Show fit
chr6_-_138744480 Show fit	35.49	ENSRNOT00000089387	AABR07065651.5 Links NCBI RGD Ensembl Show fit
chr14_+_38030189 Show fit	33.09	ENSRNOT00000035623	Txk Links NCBI RGD Ensembl Show fit	TXK tyrosine kinase
chr6_-_138909105 Show fit	26.90	ENSRNOT00000087855	AABR07065656.9 Links NCBI RGD Ensembl Show fit
chr7_+_140758615 Show fit	26.84	ENSRNOT00000089448	Troap Links NCBI RGD Ensembl Show fit	trophinin associated protein
chr1_+_199495298 Show fit	26.72	ENSRNOT00000086003 ENSRNOT00000026748	Itgad Links NCBI RGD Ensembl Show fit	integrin subunit alpha D
chr8_-_36760742 Show fit	24.76	ENSRNOT00000017307	Ddx25 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 25
chr6_-_28967902 Show fit	24.64	ENSRNOT00000032664	Mfsd2b Links NCBI RGD Ensembl Show fit	major facilitator superfamily domain containing 2B
chr6_-_138772894 Show fit	24.20	ENSRNOT00000080779	AABR07065651.1 Links NCBI RGD Ensembl Show fit
chr3_+_17180411 Show fit	24.20	ENSRNOT00000058260	AABR07051565.1 Links NCBI RGD Ensembl Show fit
chr1_-_198476476 Show fit	24.07	ENSRNOT00000027525	Kif22 Links NCBI RGD Ensembl Show fit	kinesin family member 22
chr6_-_138772736 Show fit	23.96	ENSRNOT00000071492	AABR07065651.1 Links NCBI RGD Ensembl Show fit
chr17_-_44841382 Show fit	23.71	ENSRNOT00000080119	Hist1h2ak Links NCBI RGD Ensembl Show fit	histone cluster 1, H2ak
chr5_+_152680407 Show fit	23.60	ENSRNOT00000076864	Stmn1 Links NCBI RGD Ensembl Show fit	stathmin 1
chr2_+_87418517 Show fit	22.39	ENSRNOT00000048046	LOC100909879 Links NCBI RGD Ensembl Show fit	tyrosine-protein phosphatase non-receptor type substrate 1-like
chr19_+_52217984 Show fit	21.76	ENSRNOT00000079580	Dnaaf1 Links NCBI RGD Ensembl Show fit	dynein, axonemal, assembly factor 1
chr10_+_72486152 Show fit	21.40	ENSRNOT00000004193	RGD1310166 Links NCBI RGD Ensembl Show fit	similar to Chromodomain-helicase-DNA-binding protein 1 (CHD-1)
chrX_+_138046494 Show fit	21.32	ENSRNOT00000010596	Stk26 Links NCBI RGD Ensembl Show fit	serine/threonine kinase 26
chr1_-_20417637 Show fit	21.24	ENSRNOT00000036049	RGD1559962 Links NCBI RGD Ensembl Show fit	similar to High mobility group protein 2 (HMG-2)
chr18_+_86307646 Show fit	21.02	ENSRNOT00000091778	Cd226 Links NCBI RGD Ensembl Show fit	CD226 molecule
chr20_-_3401273 Show fit	21.01	ENSRNOT00000089257 ENSRNOT00000078451 ENSRNOT00000001085	Nrm Links NCBI RGD Ensembl Show fit	nurim (nuclear envelope membrane protein)
chr15_+_28074953 Show fit	20.47	ENSRNOT00000086427	LOC103690354 Links NCBI RGD Ensembl Show fit	ribonuclease pancreatic beta-type
chr20_-_11815647 Show fit	19.99	ENSRNOT00000001639	Itgb2 Links NCBI RGD Ensembl Show fit	integrin subunit beta 2
chr10_+_105498728 Show fit	19.57	ENSRNOT00000032163	Sphk1 Links NCBI RGD Ensembl Show fit	sphingosine kinase 1
chr6_+_132551394 Show fit	19.35	ENSRNOT00000019583	Evl Links NCBI RGD Ensembl Show fit	Enah/Vasp-like
chr8_-_62410338 Show fit	19.11	ENSRNOT00000026358	Csk Links NCBI RGD Ensembl Show fit	c-src tyrosine kinase
chr6_+_139405966 Show fit	19.04	ENSRNOT00000088974	AABR07065693.3 Links NCBI RGD Ensembl Show fit
chr10_-_110232843 Show fit	18.84	ENSRNOT00000054934	Cd7 Links NCBI RGD Ensembl Show fit	Cd7 molecule
chr5_+_122508388 Show fit	18.53	ENSRNOT00000038410	Tctex1d1 Links NCBI RGD Ensembl Show fit	Tctex1 domain containing 1
chr6_+_139523337 Show fit	18.26	ENSRNOT00000090711	AABR07065699.4 Links NCBI RGD Ensembl Show fit
chr6_+_139523495 Show fit	17.85	ENSRNOT00000075467	AABR07065699.4 Links NCBI RGD Ensembl Show fit
chr6_-_138852571 Show fit	17.74	ENSRNOT00000081803	AABR07065656.8 Links NCBI RGD Ensembl Show fit
chr1_-_100234040 Show fit	17.71	ENSRNOT00000079199	Acpt Links NCBI RGD Ensembl Show fit	acid phosphatase, testicular
chr10_+_91254058 Show fit	17.41	ENSRNOT00000087218 ENSRNOT00000065373	Fmnl1 Links NCBI RGD Ensembl Show fit	formin-like 1
chr10_-_104054805 Show fit	17.33	ENSRNOT00000004853	Nt5c Links NCBI RGD Ensembl Show fit	5', 3'-nucleotidase, cytosolic
chr12_+_14021727 Show fit	16.69	ENSRNOT00000060608	Mmd2 Links NCBI RGD Ensembl Show fit	monocyte to macrophage differentiation-associated 2
chr7_+_119820537 Show fit	16.53	ENSRNOT00000077256 ENSRNOT00000056221	Cyth4 Links NCBI RGD Ensembl Show fit	cytohesin 4
chr6_-_138685656 Show fit	16.28	ENSRNOT00000041706	AABR07065651.7 Links NCBI RGD Ensembl Show fit
chr17_+_44520537 Show fit	15.71	ENSRNOT00000077985	hist1h2ail2 Links NCBI RGD Ensembl Show fit	histone cluster 1, H2ai-like2
chr1_+_63734135 Show fit	15.57	ENSRNOT00000084439	Nilr1 Links NCBI RGD Ensembl Show fit	neutrophil immunoglobulin-like receptor-1
chr5_-_122642202 Show fit	15.33	ENSRNOT00000046691	Wdr78 Links NCBI RGD Ensembl Show fit	WD repeat domain 78
chr15_+_30270740 Show fit	15.22	ENSRNOT00000070991	AABR07017707.1 Links NCBI RGD Ensembl Show fit
chr1_+_201672528 Show fit	15.17	ENSRNOT00000093490	Dmbt1 Links NCBI RGD Ensembl Show fit	deleted in malignant brain tumors 1
chr4_-_164406146 Show fit	14.90	ENSRNOT00000090110	Klra22 Links NCBI RGD Ensembl Show fit	killer cell lectin-like receptor subfamily A, member 22
chr6_-_138507294 Show fit	14.81	ENSRNOT00000078516	AABR07065640.1 Links NCBI RGD Ensembl Show fit
chr2_+_209661244 Show fit	14.72	ENSRNOT00000091973	AABR07012826.1 Links NCBI RGD Ensembl Show fit
chr2_-_200513564 Show fit	14.45	ENSRNOT00000056173	Phgdh Links NCBI RGD Ensembl Show fit	phosphoglycerate dehydrogenase
chr3_-_26056818 Show fit	14.35	ENSRNOT00000044209	Lrp1b Links NCBI RGD Ensembl Show fit	LDL receptor related protein 1B
chr11_-_69355854 Show fit	14.09	ENSRNOT00000002975	Ropn1 Links NCBI RGD Ensembl Show fit	rhophilin associated tail protein 1
chr18_+_62850588 Show fit	14.05	ENSRNOT00000025172	Gnal Links NCBI RGD Ensembl Show fit	G protein subunit alpha L
chrX_+_156274800 Show fit	13.99	ENSRNOT00000080887	G6pd Links NCBI RGD Ensembl Show fit	glucose-6-phosphate dehydrogenase
chr12_+_16913312 Show fit	13.66	ENSRNOT00000001718	Tmem184a Links NCBI RGD Ensembl Show fit	transmembrane protein 184A
chr5_-_151459037 Show fit	13.45	ENSRNOT00000064472 ENSRNOT00000087836	Sytl1 Links NCBI RGD Ensembl Show fit	synaptotagmin-like 1
chr5_+_69833225 Show fit	13.34	ENSRNOT00000013759	Nipsnap3b Links NCBI RGD Ensembl Show fit	nipsnap homolog 3B
chr10_+_57239993 Show fit	13.24	ENSRNOT00000067919	LOC687707 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC687707
chr18_-_77322690 Show fit	13.04	ENSRNOT00000058382	Nfatc1 Links NCBI RGD Ensembl Show fit	nuclear factor of activated T-cells 1
chr8_+_28454962 Show fit	12.96	ENSRNOT00000051573	Spata19 Links NCBI RGD Ensembl Show fit	spermatogenesis associated 19
chr2_+_30664217 Show fit	12.17	ENSRNOT00000076786	Ak6 Links NCBI RGD Ensembl Show fit	adenylate kinase 6
chr16_-_31301880 Show fit	12.12	ENSRNOT00000084847 ENSRNOT00000083943	AABR07025272.1 Links NCBI RGD Ensembl Show fit
chr14_-_83219071 Show fit	12.09	ENSRNOT00000085788	Depdc5 Links NCBI RGD Ensembl Show fit	DEP domain containing 5
chr6_-_139660666 Show fit	12.09	ENSRNOT00000086098	AABR07065705.1 Links NCBI RGD Ensembl Show fit
chr9_+_14951047 Show fit	11.99	ENSRNOT00000074267	LOC100911489 Links NCBI RGD Ensembl Show fit	uncharacterized LOC100911489
chr5_+_152681101 Show fit	11.98	ENSRNOT00000076052 ENSRNOT00000022574	Stmn1 Links NCBI RGD Ensembl Show fit	stathmin 1
chr1_+_212714179 Show fit	11.96	ENSRNOT00000054880 ENSRNOT00000025680	Olr292 Links NCBI RGD Ensembl Show fit	olfactory receptor 292
chr17_-_44520240 Show fit	11.90	ENSRNOT00000086538	Hist1h2bh Links NCBI RGD Ensembl Show fit	histone cluster 1 H2B family member h
chr1_-_189182306 Show fit	11.73	ENSRNOT00000021249	Gp2 Links NCBI RGD Ensembl Show fit	glycoprotein 2
chr3_-_113405829 Show fit	11.69	ENSRNOT00000036823	Ell3 Links NCBI RGD Ensembl Show fit	elongation factor for RNA polymerase II 3
chr18_-_70924708 Show fit	11.55	ENSRNOT00000025257	Lipg Links NCBI RGD Ensembl Show fit	lipase G, endothelial type
chr2_-_200762206 Show fit	11.38	ENSRNOT00000068511 ENSRNOT00000086835	Hsd3b2 Links NCBI RGD Ensembl Show fit	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
chr1_+_222250995 Show fit	11.35	ENSRNOT00000031458	Trpt1 Links NCBI RGD Ensembl Show fit	tRNA phosphotransferase 1
chr10_-_87564327 Show fit	11.28	ENSRNOT00000064760 ENSRNOT00000068237	LOC680160 Links NCBI RGD Ensembl Show fit	similar to keratin associated protein 4-7
chr6_-_92643847 Show fit	11.28	ENSRNOT00000009183	Pygl Links NCBI RGD Ensembl Show fit	glycogen phosphorylase L
chr6_-_138550417 Show fit	11.19	ENSRNOT00000071945	AABR07065645.1 Links NCBI RGD Ensembl Show fit
chrX_-_123092217 Show fit	11.11	ENSRNOT00000039710	Gm14569 Links NCBI RGD Ensembl Show fit	predicted gene 14569
chr20_-_34929965 Show fit	11.01	ENSRNOT00000004499	Mcm9 Links NCBI RGD Ensembl Show fit	minichromosome maintenance 9 homologous recombination repair factor
chr1_-_101651668 Show fit	10.62	ENSRNOT00000028519	Fut2 Links NCBI RGD Ensembl Show fit	fucosyltransferase 2
chr19_-_56731372 Show fit	10.52	ENSRNOT00000024182	Nup133 Links NCBI RGD Ensembl Show fit	nucleoporin 133
chr2_-_30664163 Show fit	10.45	ENSRNOT00000024801	Rad17 Links NCBI RGD Ensembl Show fit	RAD17 checkpoint clamp loader component
chr8_-_62893087 Show fit	10.38	ENSRNOT00000058490	Ccdc33 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 33
chr4_-_162025090 Show fit	10.00	ENSRNOT00000085887 ENSRNOT00000009904	Klrb1a Links NCBI RGD Ensembl Show fit	killer cell lectin-like receptor subfamily B, member 1A
chr14_-_5859581 Show fit	9.98	ENSRNOT00000052308	AABR07014241.1 Links NCBI RGD Ensembl Show fit
chr15_-_42751330 Show fit	9.78	ENSRNOT00000066478	Adam2 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 2
chr3_-_2841331 Show fit	9.46	ENSRNOT00000061874	Ccdc183 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 183
chr4_-_164536556 Show fit	9.44	ENSRNOT00000087796	Ly49i2 Links NCBI RGD Ensembl Show fit	Ly49 inhibitory receptor 2
chr10_-_14630151 Show fit	9.43	ENSRNOT00000024406	Ube2i Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2I
chr14_-_82055290 Show fit	9.41	ENSRNOT00000058062	RGD1560394 Links NCBI RGD Ensembl Show fit	RGD1560394
chr6_+_86852323 Show fit	9.28	ENSRNOT00000059244	Fancm Links NCBI RGD Ensembl Show fit	Fanconi anemia, complementation group M
chr4_-_122337389 Show fit	9.13	ENSRNOT00000024222	Cfap100 Links NCBI RGD Ensembl Show fit	cilia and flagella associated protein 100
chr3_-_7278758 Show fit	9.08	ENSRNOT00000017004	Spaca9 Links NCBI RGD Ensembl Show fit	sperm acrosome associated 9
chr2_-_189254628 Show fit	9.03	ENSRNOT00000028234	Il6r Links NCBI RGD Ensembl Show fit	interleukin 6 receptor
chr1_-_67284864 Show fit	8.94	ENSRNOT00000082908	LOC691661 Links NCBI RGD Ensembl Show fit	similar to zinc finger and SCAN domain containing 4
chr9_+_73418607 Show fit	8.62	ENSRNOT00000092547	Map2 Links NCBI RGD Ensembl Show fit	microtubule-associated protein 2
chrX_-_106576314 Show fit	8.54	ENSRNOT00000037823	Nxf3 Links NCBI RGD Ensembl Show fit	nuclear RNA export factor 3
chr17_-_10364503 Show fit	8.52	ENSRNOT00000086380 ENSRNOT00000041709	Tspan17 Links NCBI RGD Ensembl Show fit	tetraspanin 17
chr4_+_123801174 Show fit	8.46	ENSRNOT00000029055	RGD1560289 Links NCBI RGD Ensembl Show fit	similar to chromosome 3 open reading frame 20
chr1_-_24982606 Show fit	8.40	ENSRNOT00000074143	RGD1562660 Links NCBI RGD Ensembl Show fit	RGD1562660
chr20_-_6251634 Show fit	8.39	ENSRNOT00000059194	Stk38 Links NCBI RGD Ensembl Show fit	serine/threonine kinase 38
chr7_+_2458264 Show fit	8.26	ENSRNOT00000003550	Naca Links NCBI RGD Ensembl Show fit	nascent polypeptide-associated complex alpha subunit
chr9_+_16825845 Show fit	8.25	ENSRNOT00000074821	LOC100910410 Links NCBI RGD Ensembl Show fit	ly6/PLAUR domain-containing protein 4-like
chr19_-_28666993 Show fit	8.07	ENSRNOT00000083821	AABR07043453.1 Links NCBI RGD Ensembl Show fit
chr3_+_70327193 Show fit	8.04	ENSRNOT00000089165	Fsip2 Links NCBI RGD Ensembl Show fit	fibrous sheath-interacting protein 2
chr3_-_46601409 Show fit	7.91	ENSRNOT00000079261	Pla2r1 Links NCBI RGD Ensembl Show fit	phospholipase A2 receptor 1
chr2_-_198439454 Show fit	7.78	ENSRNOT00000028780	Fcgr1a Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor Ia
chr1_-_84353725 Show fit	7.60	ENSRNOT00000057177	Pld3 Links NCBI RGD Ensembl Show fit	phospholipase D family, member 3
chr9_-_104700609 Show fit	7.39	ENSRNOT00000081815 ENSRNOT00000018503	Slco6c1 Links NCBI RGD Ensembl Show fit	solute carrier organic anion transporter family, member 6c1
chr19_-_28751584 Show fit	7.31	ENSRNOT00000079270	AABR07043456.1 Links NCBI RGD Ensembl Show fit
chr9_+_16139101 Show fit	7.30	ENSRNOT00000070803	LOC100910668 Links NCBI RGD Ensembl Show fit	uncharacterized LOC100910668
chr6_+_75429729 Show fit	7.27	ENSRNOT00000043250	Rps10l1 Links NCBI RGD Ensembl Show fit	ribosomal protein S10-like 1
chr19_+_37600148 Show fit	7.21	ENSRNOT00000023853	Ctcf Links NCBI RGD Ensembl Show fit	CCCTC-binding factor
chr3_-_13865843 Show fit	7.09	ENSRNOT00000025194	Rabepk Links NCBI RGD Ensembl Show fit	Rab9 effector protein with kelch motifs
chr2_+_209358760 Show fit	7.08	ENSRNOT00000082631	Lrif1 Links NCBI RGD Ensembl Show fit	ligand dependent nuclear receptor interacting factor 1
chr19_-_42180981 Show fit	7.00	ENSRNOT00000019577	Pmfbp1 Links NCBI RGD Ensembl Show fit	polyamine modulated factor 1 binding protein 1
chr12_-_9727489 Show fit	7.00	ENSRNOT00000001261	Polr1d Links NCBI RGD Ensembl Show fit	RNA polymerase I subunit D
chr11_+_82373870 Show fit	6.85	ENSRNOT00000002429	Tra2b Links NCBI RGD Ensembl Show fit	transformer 2 beta homolog (Drosophila)
chr1_+_20022793 Show fit	6.72	ENSRNOT00000061404	L3mbtl3 Links NCBI RGD Ensembl Show fit	l(3)mbt-like 3 (Drosophila)
chr13_-_74005486 Show fit	6.39	ENSRNOT00000090173	AABR07021465.1 Links NCBI RGD Ensembl Show fit
chr4_+_6282278 Show fit	6.35	ENSRNOT00000010349	Kmt2c Links NCBI RGD Ensembl Show fit	lysine methyltransferase 2C
chr19_-_28044531 Show fit	6.35	ENSRNOT00000086160	AABR07043395.1 Links NCBI RGD Ensembl Show fit
chr20_+_48552289 Show fit	6.35	ENSRNOT00000077926	Cdc40 Links NCBI RGD Ensembl Show fit	cell division cycle 40
chr6_+_43363792 Show fit	6.31	ENSRNOT00000091061	Cpsf3 Links NCBI RGD Ensembl Show fit	cleavage and polyadenylation specific factor 3
chr8_+_50563047 Show fit	6.30	ENSRNOT00000025149	Zfp259 Links NCBI RGD Ensembl Show fit	zinc finger protein 259
chr17_+_56109549 Show fit	6.25	ENSRNOT00000022190	Map3k8 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase 8
chr11_+_67451549 Show fit	6.24	ENSRNOT00000042777	Stfa2l2 Links NCBI RGD Ensembl Show fit	stefin A2-like 2
chr4_+_118243132 Show fit	6.23	ENSRNOT00000023654	RGD1306746 Links NCBI RGD Ensembl Show fit	similar to Hypothetical protein MGC25529
chr1_-_24891461 Show fit	6.15	ENSRNOT00000049208	LOC501467 Links NCBI RGD Ensembl Show fit	similar to spermatogenesis associated glutamate (E)-rich protein 4d
chr15_-_40545824 Show fit	6.14	ENSRNOT00000017204	Nup58 Links NCBI RGD Ensembl Show fit	nucleoporin 58
chr10_-_57837602 Show fit	6.11	ENSRNOT00000075185	Nlrp1b Links NCBI RGD Ensembl Show fit	NLR family, pyrin domain containing 1B
chr5_+_164972480 Show fit	6.01	ENSRNOT00000012670	Fbxo2 Links NCBI RGD Ensembl Show fit	F-box protein 2
chr7_-_11406771 Show fit	6.00	ENSRNOT00000047450	Eef2 Links NCBI RGD Ensembl Show fit	eukaryotic translation elongation factor 2
chr1_-_141533908 Show fit	5.98	ENSRNOT00000020117	Mesp1 Links NCBI RGD Ensembl Show fit	mesoderm posterior bHLH transcription factor 1
chr15_+_45422010 Show fit	5.72	ENSRNOT00000012231	Rnaseh2b Links NCBI RGD Ensembl Show fit	ribonuclease H2, subunit B
chr4_-_179700130 Show fit	5.55	ENSRNOT00000021306	Lmntd1 Links NCBI RGD Ensembl Show fit	lamin tail domain containing 1
chr12_-_22478752 Show fit	5.54	ENSRNOT00000089392 ENSRNOT00000086915	Ache Links NCBI RGD Ensembl Show fit	acetylcholinesterase
chr7_+_130542202 Show fit	5.49	ENSRNOT00000079501 ENSRNOT00000045647	Acr Links NCBI RGD Ensembl Show fit	acrosin
chr19_+_52258947 Show fit	5.43	ENSRNOT00000021072	Adad2 Links NCBI RGD Ensembl Show fit	adenosine deaminase domain containing 2
chr4_-_155867708 Show fit	5.37	ENSRNOT00000051525	Clec4a2 Links NCBI RGD Ensembl Show fit	C-type lectin domain family 4, member A2
chr10_-_83655182 Show fit	5.29	ENSRNOT00000007897	Abi3 Links NCBI RGD Ensembl Show fit	ABI family, member 3
chr8_+_117660964 Show fit	5.25	ENSRNOT00000049240	Tmem89 Links NCBI RGD Ensembl Show fit	transmembrane protein 89
chr1_+_196095214 Show fit	5.22	ENSRNOT00000080741	LOC691716 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S15a
chr10_+_109786222 Show fit	5.20	ENSRNOT00000054953	Npb Links NCBI RGD Ensembl Show fit	neuropeptide B
chr16_+_69048730 Show fit	5.16	ENSRNOT00000086082 ENSRNOT00000078128	Rab11fip1 Links NCBI RGD Ensembl Show fit	RAB11 family interacting protein 1
chr2_-_206274079 Show fit	5.03	ENSRNOT00000056079	Hipk1 Links NCBI RGD Ensembl Show fit	homeodomain interacting protein kinase 1
chr7_+_123531682 Show fit	4.96	ENSRNOT00000010606	Wbp2nl Links NCBI RGD Ensembl Show fit	WBP2 N-terminal like
chrX_-_124870329 Show fit	4.91	ENSRNOT00000065023	Cul4b Links NCBI RGD Ensembl Show fit	cullin 4B
chrX_+_74497262 Show fit	4.89	ENSRNOT00000003899	Zcchc13 Links NCBI RGD Ensembl Show fit	zinc finger CCHC-type containing 13
chr4_+_171250818 Show fit	4.83	ENSRNOT00000040576	Ptpro Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, O
chr10_-_92602082 Show fit	4.75	ENSRNOT00000007963	Cdc27 Links NCBI RGD Ensembl Show fit	cell division cycle 27
chr4_-_164691405 Show fit	4.75	ENSRNOT00000090979 ENSRNOT00000091932 ENSRNOT00000078219	Ly49s4 Links NCBI RGD Ensembl Show fit Ly49i2 Links NCBI RGD Ensembl Show fit	Ly49 stimulatory receptor 4 Ly49 inhibitory receptor 2
chr13_+_84588351 Show fit	4.75	ENSRNOT00000005090	Tada1 Links NCBI RGD Ensembl Show fit	transcriptional adaptor 1
chr3_+_2547986 Show fit	4.42	ENSRNOT00000016846	Man1b1 Links NCBI RGD Ensembl Show fit	mannosidase, alpha, class 1B, member 1
chr2_-_57196568 Show fit	4.41	ENSRNOT00000060146	Wdr70 Links NCBI RGD Ensembl Show fit	WD repeat domain 70
chr7_+_11054333 Show fit	4.37	ENSRNOT00000007202	Gna15 Links NCBI RGD Ensembl Show fit	guanine nucleotide binding protein, alpha 15
chr17_+_79749747 Show fit	4.33	ENSRNOT00000081743	AABR07028665.1 Links NCBI RGD Ensembl Show fit
chr9_-_61033553 Show fit	4.29	ENSRNOT00000002864 ENSRNOT00000082681	Gtf3c3 Links NCBI RGD Ensembl Show fit	general transcription factor IIIC subunit 3
chr3_+_152752091 Show fit	4.29	ENSRNOT00000037177	Dlgap4 Links NCBI RGD Ensembl Show fit	DLG associated protein 4
chr10_-_103826448 Show fit	4.28	ENSRNOT00000085636	Fdxr Links NCBI RGD Ensembl Show fit	ferredoxin reductase
chr9_+_38297322 Show fit	4.05	ENSRNOT00000078157 ENSRNOT00000088824	Bend6 Links NCBI RGD Ensembl Show fit	BEN domain containing 6
chr19_+_248622 Show fit	3.95	ENSRNOT00000078228	AABR07042607.1 Links NCBI RGD Ensembl Show fit
chr6_-_103187275 Show fit	3.93	ENSRNOT00000083272	LOC100359616 Links NCBI RGD Ensembl Show fit	ribosomal protein L36-like
chr7_+_73270455 Show fit	3.87	ENSRNOT00000007190	Pop1 Links NCBI RGD Ensembl Show fit	POP1 homolog, ribonuclease P/MRP subunit
chr9_-_81565416 Show fit	3.85	ENSRNOT00000083582	Aamp Links NCBI RGD Ensembl Show fit	angio-associated, migratory cell protein
chr3_+_71020534 Show fit	3.84	ENSRNOT00000007276	Zc3h15 Links NCBI RGD Ensembl Show fit	zinc finger CCCH-type containing 15
chr10_+_70689863 Show fit	3.80	ENSRNOT00000091122 ENSRNOT00000086987 ENSRNOT00000082030	Taf15 Links NCBI RGD Ensembl Show fit	TATA-box binding protein associated factor 15
chr11_+_86852711 Show fit	3.78	ENSRNOT00000002581	Dgcr8 Links NCBI RGD Ensembl Show fit	DGCR8 microprocessor complex subunit
chr5_-_150704117 Show fit	3.75	ENSRNOT00000067455	Sesn2 Links NCBI RGD Ensembl Show fit	sestrin 2
chr7_-_27213651 Show fit	3.70	ENSRNOT00000077041 ENSRNOT00000076468	Tdg Links NCBI RGD Ensembl Show fit	thymine-DNA glycosylase
chr4_-_113764532 Show fit	3.66	ENSRNOT00000009269	Sema4f Links NCBI RGD Ensembl Show fit	ssemaphorin 4F
chr4_+_87026530 Show fit	3.65	ENSRNOT00000018425	Avl9 Links NCBI RGD Ensembl Show fit	AVL9 cell migration associated
chr7_-_130288509 Show fit	3.61	ENSRNOT00000072955	Sbf1 Links NCBI RGD Ensembl Show fit	SET binding factor 1
chr16_+_80729959 Show fit	3.33	ENSRNOT00000082049	Tdrp Links NCBI RGD Ensembl Show fit	testis development related protein
chr15_+_32324830 Show fit	3.30	ENSRNOT00000071598	AABR07017895.1 Links NCBI RGD Ensembl Show fit
chr16_-_86582984 Show fit	3.13	ENSRNOT00000057349	RGD1564807 Links NCBI RGD Ensembl Show fit	similar to zinc finger protein, subfamily 1A, 5
chr1_-_263959318 Show fit	3.11	ENSRNOT00000068007	Pkd2l1 Links NCBI RGD Ensembl Show fit	polycystin 2 like 1, transient receptor potential cation channel
chr1_+_78069193 Show fit	3.05	ENSRNOT00000068406	Meis3 Links NCBI RGD Ensembl Show fit	Meis homeobox 3
chr8_-_79119720 Show fit	3.01	ENSRNOT00000086562	Tex9 Links NCBI RGD Ensembl Show fit	testis expressed 9
chr15_+_34926686 Show fit	2.95	ENSRNOT00000045948	Mcpt1l3 Links NCBI RGD Ensembl Show fit	mast cell protease 1-like 3
chr1_+_89162639 Show fit	2.92	ENSRNOT00000028508	Atp4a Links NCBI RGD Ensembl Show fit	ATPase H+/K+ transporting alpha subunit
chr10_+_71332803 Show fit	2.88	ENSRNOT00000087428	Synrg Links NCBI RGD Ensembl Show fit	synergin, gamma
chr7_-_129919946 Show fit	2.61	ENSRNOT00000079976	AABR07058658.1 Links NCBI RGD Ensembl Show fit
chr3_-_161819029 Show fit	2.60	ENSRNOT00000091834	LOC102555457 Links NCBI RGD Ensembl Show fit	engulfment and cell motility protein 2-like
chr5_-_143120165 Show fit	2.56	ENSRNOT00000012314	Zc3h12a Links NCBI RGD Ensembl Show fit	zinc finger CCCH type containing 12A
chr6_-_91250138 Show fit	2.53	ENSRNOT00000052408	LOC100911256 Links NCBI RGD Ensembl Show fit	ninein-like
chr17_+_57040023 Show fit	2.52	ENSRNOT00000020204	Crem Links NCBI RGD Ensembl Show fit	cAMP responsive element modulator
chr20_+_47596575 Show fit	2.50	ENSRNOT00000087230 ENSRNOT00000064905	Scml4 Links NCBI RGD Ensembl Show fit	sex comb on midleg-like 4 (Drosophila)
chr10_-_55997299 Show fit	2.44	ENSRNOT00000074505	Cyb5d1 Links NCBI RGD Ensembl Show fit	cytochrome b5 domain containing 1
chr10_+_71008709 Show fit	2.36	ENSRNOT00000055923	Wfdc18 Links NCBI RGD Ensembl Show fit	WAP four-disulfide core domain 18
chr3_-_46051096 Show fit	2.36	ENSRNOT00000081302	Baz2b Links NCBI RGD Ensembl Show fit	bromodomain adjacent to zinc finger domain, 2B
chr2_+_187990242 Show fit	2.34	ENSRNOT00000092819	Arhgef2 Links NCBI RGD Ensembl Show fit	Rho/Rac guanine nucleotide exchange factor 2
chr7_+_117643206 Show fit	2.33	ENSRNOT00000077588	Adck5 Links NCBI RGD Ensembl Show fit	aarF domain containing kinase 5
chr5_-_58288125 Show fit	2.28	ENSRNOT00000068752	Fam205a Links NCBI RGD Ensembl Show fit	family with sequence similarity 205, member A
chr5_-_69752314 Show fit	2.26	ENSRNOT00000024724	Olr852 Links NCBI RGD Ensembl Show fit	olfactory receptor 852
chr20_+_2044200 Show fit	2.24	ENSRNOT00000092626	RT1-M4 Links NCBI RGD Ensembl Show fit	RT1 class Ib, locus M4
chr10_-_109840047 Show fit	2.16	ENSRNOT00000054947	Notum Links NCBI RGD Ensembl Show fit	NOTUM, palmitoleoyl-protein carboxylesterase
chr9_+_98621506 Show fit	2.15	ENSRNOT00000056612 ENSRNOT00000081992	Traf3ip1 Links NCBI RGD Ensembl Show fit	TRAF3 interacting protein 1
chr3_-_125533600 Show fit	2.07	ENSRNOT00000040802	Lrrn4 Links NCBI RGD Ensembl Show fit	leucine rich repeat neuronal 4
chr7_+_144503534 Show fit	2.07	ENSRNOT00000021543	Tbca Links NCBI RGD Ensembl Show fit	tubulin folding cofactor A
chr20_+_48504264 Show fit	2.06	ENSRNOT00000087740	Cdc40 Links NCBI RGD Ensembl Show fit	cell division cycle 40
chr5_-_151029233 Show fit	1.96	ENSRNOT00000089155	Ppp1r8 Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 8

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
8.9	35.6	GO:0070495	regulation of thrombin receptor signaling pathway(GO:0070494) negative regulation of thrombin receptor signaling pathway(GO:0070495)
8.3	33.1	GO:0060335	positive regulation of response to interferon-gamma(GO:0060332) positive regulation of interferon-gamma-mediated signaling pathway(GO:0060335)
7.0	21.0	GO:0060369	positive regulation of Fc receptor mediated stimulatory signaling pathway(GO:0060369)
4.7	14.0	GO:1904879	angiotensin mediated vasoconstriction involved in regulation of systemic arterial blood pressure(GO:0001998) positive regulation of calcium ion transmembrane transport via high voltage-gated calcium channel(GO:1904879)
4.3	17.3	GO:0009223	pyrimidine deoxyribonucleotide catabolic process(GO:0009223)
4.2	38.1	GO:0070543	response to linoleic acid(GO:0070543)
3.9	19.6	GO:0019371	cyclooxygenase pathway(GO:0019371)
3.8	11.5	GO:0010986	regulation of high-density lipoprotein particle clearance(GO:0010982) positive regulation of lipoprotein particle clearance(GO:0010986)
3.8	19.1	GO:0010989	negative regulation of low-density lipoprotein particle clearance(GO:0010989)
3.4	13.7	GO:0018992	germ-line sex determination(GO:0018992)
3.3	13.0	GO:0002337	B-1a B cell differentiation(GO:0002337)
3.1	21.8	GO:0035469	determination of pancreatic left/right asymmetry(GO:0035469)
3.0	6.0	GO:0090081	regulation of heart induction by regulation of canonical Wnt signaling pathway(GO:0090081)
3.0	26.7	GO:0010668	ectodermal cell differentiation(GO:0010668)
2.9	11.7	GO:0002386	immune response in mucosal-associated lymphoid tissue(GO:0002386)
2.9	14.5	GO:0006564	L-serine biosynthetic process(GO:0006564) threonine metabolic process(GO:0006566)
2.8	11.3	GO:0006015	5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
2.8	8.3	GO:1901227	negative regulation of transcription from RNA polymerase II promoter involved in heart development(GO:1901227)
2.6	7.8	GO:0001788	antibody-dependent cellular cytotoxicity(GO:0001788)
1.9	11.4	GO:0034757	negative regulation of iron ion transport(GO:0034757)
1.8	9.0	GO:0010533	regulation of activation of Janus kinase activity(GO:0010533) ciliary neurotrophic factor-mediated signaling pathway(GO:0070120)
1.8	21.2	GO:0006265	DNA topological change(GO:0006265)
1.8	14.1	GO:0009405	pathogenesis(GO:0009405)
1.6	19.4	GO:1900028	negative regulation of ruffle assembly(GO:1900028)
1.6	6.3	GO:0030576	trophectodermal cell proliferation(GO:0001834) Cajal body organization(GO:0030576)
1.5	10.5	GO:0000972	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972)
1.5	4.4	GO:1904380	endoplasmic reticulum mannose trimming(GO:1904380)
1.5	11.7	GO:0042795	snRNA transcription from RNA polymerase II promoter(GO:0042795)
1.2	3.7	GO:1902544	regulation of DNA N-glycosylase activity(GO:1902544)
1.2	6.0	GO:2000767	positive regulation of cytoplasmic translation(GO:2000767)
1.2	17.4	GO:0051014	actin filament severing(GO:0051014)
1.1	7.9	GO:0090238	positive regulation of arachidonic acid secretion(GO:0090238) oxidative stress-induced premature senescence(GO:0090403)
1.1	20.0	GO:0002523	leukocyte migration involved in inflammatory response(GO:0002523) cellular response to low-density lipoprotein particle stimulus(GO:0071404)
1.1	6.3	GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
1.0	11.3	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
1.0	3.9	GO:0001682	tRNA 5'-leader removal(GO:0001682)
0.9	3.8	GO:0031053	primary miRNA processing(GO:0031053)
0.9	3.8	GO:0090526	regulation of gluconeogenesis involved in cellular glucose homeostasis(GO:0090526)
0.9	8.3	GO:0033314	mitotic DNA replication checkpoint(GO:0033314)
0.9	7.2	GO:0010216	maintenance of DNA methylation(GO:0010216) nucleosome positioning(GO:0016584)
0.9	2.6	GO:1990869	nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay(GO:0000294) response to chemokine(GO:1990868) cellular response to chemokine(GO:1990869)
0.8	4.8	GO:0003105	negative regulation of glomerular filtration(GO:0003105)
0.8	15.2	GO:0001833	inner cell mass cell proliferation(GO:0001833)
0.8	5.5	GO:0007341	penetration of zona pellucida(GO:0007341)
0.8	4.6	GO:0070164	negative regulation of adiponectin secretion(GO:0070164)
0.8	0.8	GO:0000720	pyrimidine dimer repair by nucleotide-excision repair(GO:0000720)
0.8	10.6	GO:0036065	fucosylation(GO:0036065)
0.7	10.2	GO:1904262	negative regulation of TORC1 signaling(GO:1904262)
0.7	12.2	GO:0015937	coenzyme A biosynthetic process(GO:0015937)
0.7	22.2	GO:0030033	microvillus assembly(GO:0030033)
0.7	12.0	GO:0042492	gamma-delta T cell differentiation(GO:0042492)
0.7	8.5	GO:0016973	poly(A)+ mRNA export from nucleus(GO:0016973)
0.7	24.1	GO:0007080	mitotic metaphase plate congression(GO:0007080)
0.6	5.0	GO:0060235	lens induction in camera-type eye(GO:0060235)
0.6	5.5	GO:1900619	acetylcholine metabolic process(GO:0008291) acetate ester metabolic process(GO:1900619)
0.6	6.7	GO:0043249	erythrocyte maturation(GO:0043249)
0.6	9.5	GO:0036158	outer dynein arm assembly(GO:0036158)
0.6	14.1	GO:0048240	sperm capacitation(GO:0048240)
0.6	2.3	GO:0071802	negative regulation of podosome assembly(GO:0071802)
0.6	9.3	GO:0000712	resolution of meiotic recombination intermediates(GO:0000712)
0.6	24.8	GO:0071427	mRNA export from nucleus(GO:0006406) mRNA-containing ribonucleoprotein complex export from nucleus(GO:0071427)
0.6	9.4	GO:0033235	positive regulation of protein sumoylation(GO:0033235)
0.5	4.9	GO:0070914	UV-damage excision repair(GO:0070914)
0.5	16.7	GO:0019835	cytolysis(GO:0019835)
0.5	6.9	GO:0021796	cerebral cortex regionalization(GO:0021796)
0.5	6.3	GO:0061029	eyelid development in camera-type eye(GO:0061029)
0.4	3.1	GO:0050915	sensory perception of sour taste(GO:0050915)
0.4	5.7	GO:2000001	regulation of DNA damage checkpoint(GO:2000001)
0.4	6.0	GO:0006516	glycoprotein catabolic process(GO:0006516)
0.4	2.1	GO:1901621	negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning(GO:1901621)
0.4	4.3	GO:0070995	NADPH oxidation(GO:0070995)
0.4	4.2	GO:0007343	egg activation(GO:0007343)
0.4	18.8	GO:0048873	homeostasis of number of cells within a tissue(GO:0048873)
0.4	34.1	GO:0006342	chromatin silencing(GO:0006342)
0.4	6.8	GO:0070208	protein heterotrimerization(GO:0070208)
0.4	4.4	GO:0060158	phospholipase C-activating dopamine receptor signaling pathway(GO:0060158)
0.4	9.2	GO:0032012	regulation of ARF protein signal transduction(GO:0032012)
0.4	1.1	GO:0090648	regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation(GO:0060734) response to methyl methanesulfonate(GO:0072702) cellular response to methyl methanesulfonate(GO:0072703) response to environmental enrichment(GO:0090648) positive regulation of peptidyl-serine dephosphorylation(GO:1902310)
0.4	1.1	GO:0018076	N-terminal peptidyl-lysine acetylation(GO:0018076)
0.3	1.2	GO:2000293	regulation of defecation(GO:2000292) negative regulation of defecation(GO:2000293)
0.3	2.5	GO:0034454	microtubule anchoring at centrosome(GO:0034454)
0.3	4.3	GO:0006359	regulation of transcription from RNA polymerase III promoter(GO:0006359)
0.3	6.1	GO:0050716	positive regulation of interleukin-1 secretion(GO:0050716) positive regulation of interleukin-1 beta secretion(GO:0050718)
0.3	2.1	GO:0007021	tubulin complex assembly(GO:0007021)
0.2	2.2	GO:0042159	lipoprotein catabolic process(GO:0042159)
0.2	8.6	GO:0007026	negative regulation of microtubule depolymerization(GO:0007026)
0.2	13.5	GO:0048791	calcium ion-regulated exocytosis of neurotransmitter(GO:0048791)
0.2	0.4	GO:0048850	hypophysis morphogenesis(GO:0048850)
0.2	1.7	GO:0090315	negative regulation of protein targeting to membrane(GO:0090315)
0.2	10.9	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.2	1.6	GO:0010764	negative regulation of fibroblast migration(GO:0010764)
0.2	2.9	GO:0010248	establishment or maintenance of transmembrane electrochemical gradient(GO:0010248)
0.2	4.8	GO:0070979	protein K11-linked ubiquitination(GO:0070979)
0.2	11.2	GO:0008542	visual learning(GO:0008542)
0.2	1.8	GO:0038094	Fc-gamma receptor signaling pathway(GO:0038094)
0.1	1.0	GO:2000381	negative regulation of mesoderm development(GO:2000381)
0.1	4.1	GO:0045746	negative regulation of Notch signaling pathway(GO:0045746)
0.1	11.0	GO:0006334	nucleosome assembly(GO:0006334)
0.1	3.7	GO:0031290	retinal ganglion cell axon guidance(GO:0031290)
0.1	11.0	GO:0000724	double-strand break repair via homologous recombination(GO:0000724)
0.1	16.2	GO:0042476	odontogenesis(GO:0042476)
0.1	1.5	GO:0071880	adenylate cyclase-activating adrenergic receptor signaling pathway(GO:0071880)
0.1	0.4	GO:0031119	tRNA pseudouridine synthesis(GO:0031119)
0.1	2.5	GO:0048384	retinoic acid receptor signaling pathway(GO:0048384)
0.1	1.3	GO:0060314	regulation of ryanodine-sensitive calcium-release channel activity(GO:0060314)
0.1	9.0	GO:0002244	hematopoietic progenitor cell differentiation(GO:0002244)
0.1	4.2	GO:0042273	ribosomal large subunit biogenesis(GO:0042273)
0.1	0.3	GO:0009181	purine nucleoside diphosphate catabolic process(GO:0009137) purine ribonucleoside diphosphate catabolic process(GO:0009181)
0.0	1.8	GO:0006458	'de novo' protein folding(GO:0006458)
0.0	4.5	GO:0007218	neuropeptide signaling pathway(GO:0007218)
0.0	1.4	GO:0034314	Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0	1.5	GO:0000413	protein peptidyl-prolyl isomerization(GO:0000413)
0.0	1.3	GO:0046839	phospholipid dephosphorylation(GO:0046839)
0.0	8.4	GO:0018105	peptidyl-serine phosphorylation(GO:0018105)
0.0	1.1	GO:0070527	platelet aggregation(GO:0070527)
0.0	2.0	GO:0035308	negative regulation of protein dephosphorylation(GO:0035308)
0.0	1.8	GO:0032680	regulation of tumor necrosis factor production(GO:0032680)
0.0	9.6	GO:0048232	spermatogenesis(GO:0007283) male gamete generation(GO:0048232)
0.0	5.3	GO:0018108	peptidyl-tyrosine phosphorylation(GO:0018108)
0.0	3.1	GO:2001234	negative regulation of apoptotic signaling pathway(GO:2001234)
0.0	0.6	GO:0000381	regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0	0.5	GO:0043488	regulation of mRNA stability(GO:0043488)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
3.0	9.0	GO:0070110	interleukin-6 receptor complex(GO:0005896) ciliary neurotrophic factor receptor complex(GO:0070110)
2.4	12.1	GO:1990130	Iml1 complex(GO:1990130)
2.3	14.1	GO:0097598	sperm cytoplasmic droplet(GO:0097598)
1.4	5.7	GO:0032299	ribonuclease H2 complex(GO:0032299)
1.3	3.9	GO:0000172	ribonuclease MRP complex(GO:0000172)
1.3	45.2	GO:0008305	integrin complex(GO:0008305)
1.1	5.5	GO:0043159	acrosomal matrix(GO:0043159)
1.0	9.3	GO:0071821	FANCM-MHF complex(GO:0071821)
1.0	11.0	GO:0042555	MCM complex(GO:0042555)
1.0	4.9	GO:0031465	Cul4B-RING E3 ubiquitin ligase complex(GO:0031465)
1.0	8.6	GO:0097442	CA3 pyramidal cell dendrite(GO:0097442)
1.0	10.5	GO:0031080	nuclear pore outer ring(GO:0031080)
0.9	18.7	GO:0033391	chromatoid body(GO:0033391)
0.9	6.3	GO:0097504	Gemini of coiled bodies(GO:0097504)
0.9	6.1	GO:0072559	NLRP3 inflammasome complex(GO:0072559)
0.8	15.2	GO:0042589	zymogen granule membrane(GO:0042589)
0.6	4.3	GO:0000127	transcription factor TFIIIC complex(GO:0000127)
0.6	6.0	GO:0042788	polysomal ribosome(GO:0042788)
0.6	7.0	GO:0005736	DNA-directed RNA polymerase I complex(GO:0005736)
0.6	4.4	GO:0044322	endoplasmic reticulum quality control compartment(GO:0044322)
0.5	6.3	GO:0044666	MLL3/4 complex(GO:0044666)
0.5	70.6	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane(GO:0031234)
0.5	27.9	GO:0005637	nuclear inner membrane(GO:0005637)
0.5	3.8	GO:1990316	ATG1/ULK1 kinase complex(GO:1990316)
0.5	45.0	GO:0000786	nucleosome(GO:0000786)
0.4	2.6	GO:0042406	extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.4	6.3	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.4	7.0	GO:0001520	outer dense fiber(GO:0001520)
0.4	24.1	GO:0005871	kinesin complex(GO:0005871)
0.4	5.5	GO:0043083	synaptic cleft(GO:0043083)
0.3	22.0	GO:0045335	phagocytic vesicle(GO:0045335)
0.3	33.4	GO:0097014	axoneme(GO:0005930) ciliary plasm(GO:0097014)
0.3	24.2	GO:0005798	Golgi-associated vesicle(GO:0005798)
0.3	3.3	GO:0030914	STAGA complex(GO:0030914)
0.2	1.4	GO:0005885	Arp2/3 protein complex(GO:0005885)
0.2	4.8	GO:0005680	anaphase-promoting complex(GO:0005680)
0.2	12.2	GO:0015030	Cajal body(GO:0015030)
0.2	11.7	GO:0008023	transcription elongation factor complex(GO:0008023)
0.2	13.5	GO:0019897	extrinsic component of plasma membrane(GO:0019897)
0.2	13.7	GO:0030667	secretory granule membrane(GO:0030667)
0.2	3.8	GO:1902555	endoribonuclease complex(GO:1902555)
0.2	62.2	GO:0009897	external side of plasma membrane(GO:0009897)
0.2	14.0	GO:0009898	cytoplasmic side of plasma membrane(GO:0009898)
0.2	18.9	GO:0001669	acrosomal vesicle(GO:0001669)
0.2	18.2	GO:0016605	PML body(GO:0016605)
0.2	17.5	GO:0000781	chromosome, telomeric region(GO:0000781)
0.2	1.8	GO:0005832	chaperonin-containing T-complex(GO:0005832)
0.1	0.8	GO:1990357	terminal web(GO:1990357)
0.1	3.9	GO:0030687	preribosome, large subunit precursor(GO:0030687)
0.1	24.6	GO:0030027	lamellipodium(GO:0030027)
0.1	7.4	GO:0032580	Golgi cisterna membrane(GO:0032580)
0.1	19.6	GO:0008021	synaptic vesicle(GO:0008021)
0.1	30.0	GO:0005874	microtubule(GO:0005874)
0.1	7.2	GO:0031225	anchored component of membrane(GO:0031225)
0.1	34.5	GO:0000790	nuclear chromatin(GO:0000790)
0.1	1.2	GO:0070852	varicosity(GO:0043196) cell body fiber(GO:0070852)
0.1	4.8	GO:0016328	lateral plasma membrane(GO:0016328)
0.1	14.1	GO:0005741	mitochondrial outer membrane(GO:0005741)
0.1	9.9	GO:0071013	catalytic step 2 spliceosome(GO:0071013)
0.1	14.5	GO:0043209	myelin sheath(GO:0043209)
0.1	0.3	GO:0031428	box C/D snoRNP complex(GO:0031428)
0.1	1.8	GO:0097546	ciliary base(GO:0097546)
0.1	0.7	GO:0044613	nuclear pore central transport channel(GO:0044613)
0.1	7.2	GO:0000775	chromosome, centromeric region(GO:0000775)
0.1	3.6	GO:0055037	recycling endosome(GO:0055037)
0.1	0.5	GO:0060293	P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1	12.6	GO:0031965	nuclear membrane(GO:0031965)
0.1	3.1	GO:0034704	calcium channel complex(GO:0034704)
0.1	7.1	GO:0010008	endosome membrane(GO:0010008)
0.1	1.6	GO:0035869	ciliary transition zone(GO:0035869)
0.0	9.8	GO:0005769	early endosome(GO:0005769)
0.0	0.2	GO:0030122	AP-2 adaptor complex(GO:0030122)
0.0	1.3	GO:0016529	sarcoplasmic reticulum(GO:0016529)
0.0	2.5	GO:0019005	SCF ubiquitin ligase complex(GO:0019005)
0.0	8.1	GO:0043235	receptor complex(GO:0043235)
0.0	1.4	GO:0016592	mediator complex(GO:0016592)
0.0	1.5	GO:0005770	late endosome(GO:0005770)
0.0	0.3	GO:0032045	guanyl-nucleotide exchange factor complex(GO:0032045)
0.0	1.4	GO:0030496	midbody(GO:0030496)
0.0	5.2	GO:0005840	ribosome(GO:0005840)
0.0	5.9	GO:0031966	mitochondrial membrane(GO:0031966)
0.0	5.4	GO:0031410	cytoplasmic vesicle(GO:0031410)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
6.8	20.5	GO:0004522	ribonuclease A activity(GO:0004522)
6.5	19.6	GO:0008481	sphinganine kinase activity(GO:0008481)
5.3	21.2	GO:0044378	non-sequence-specific DNA binding, bending(GO:0044378)
3.8	11.4	GO:0004769	steroid delta-isomerase activity(GO:0004769)
3.8	11.3	GO:0002060	purine nucleobase binding(GO:0002060) glycogen phosphorylase activity(GO:0008184)
3.5	10.6	GO:0031127	galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
3.3	13.0	GO:0001225	RNA polymerase II transcription coactivator binding(GO:0001225)
3.1	9.4	GO:0043398	HLH domain binding(GO:0043398)
2.4	12.2	GO:0004140	dephospho-CoA kinase activity(GO:0004140)
2.3	9.0	GO:0004897	ciliary neurotrophic factor receptor activity(GO:0004897)
2.2	15.2	GO:0035375	zymogen binding(GO:0035375)
2.0	36.8	GO:0005522	profilin binding(GO:0005522)
1.9	11.5	GO:0008970	phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
1.9	9.6	GO:0019770	IgG receptor activity(GO:0019770)
1.8	5.5	GO:0003990	acetylcholinesterase activity(GO:0003990)
1.8	5.5	GO:0004040	amidase activity(GO:0004040)
1.7	38.1	GO:0051861	glycolipid binding(GO:0051861)
1.6	17.3	GO:0019103	pyrimidine nucleotide binding(GO:0019103)
1.3	3.9	GO:0000171	ribonuclease MRP activity(GO:0000171)
1.3	7.6	GO:0070290	N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
1.2	3.7	GO:0008263	pyrimidine-specific mismatch base pair DNA N-glycosylase activity(GO:0008263)
1.1	5.7	GO:0004523	RNA-DNA hybrid ribonuclease activity(GO:0004523)
1.1	4.3	GO:0000995	transcription factor activity, core RNA polymerase III binding(GO:0000995)
1.0	10.4	GO:0033170	DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
1.0	13.5	GO:0042043	neurexin family protein binding(GO:0042043)
0.9	3.8	GO:0032296	ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.9	17.7	GO:0003993	acid phosphatase activity(GO:0003993)
0.9	14.0	GO:0005536	glucose binding(GO:0005536)
0.9	52.2	GO:0004715	non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.8	21.8	GO:0070840	dynein complex binding(GO:0070840)
0.7	2.9	GO:0008900	hydrogen:potassium-exchanging ATPase activity(GO:0008900)
0.7	17.4	GO:0005487	nucleocytoplasmic transporter activity(GO:0005487)
0.6	18.4	GO:0031683	G-protein beta/gamma-subunit complex binding(GO:0031683)
0.6	3.8	GO:0070728	leucine binding(GO:0070728)
0.5	6.0	GO:0008097	5S rRNA binding(GO:0008097)
0.5	4.4	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571)
0.5	6.1	GO:0008656	cysteine-type endopeptidase activator activity involved in apoptotic process(GO:0008656)
0.5	5.4	GO:0004000	adenosine deaminase activity(GO:0004000)
0.4	61.3	GO:0001948	glycoprotein binding(GO:0001948)
0.4	6.3	GO:0008409	5'-3' exonuclease activity(GO:0008409)
0.4	7.9	GO:0043274	phospholipase binding(GO:0043274)
0.4	9.2	GO:0005086	ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.3	6.9	GO:0070717	poly-purine tract binding(GO:0070717)
0.3	21.2	GO:0003724	RNA helicase activity(GO:0003724) ATP-dependent RNA helicase activity(GO:0004004)
0.3	1.2	GO:0015056	corticotrophin-releasing factor receptor activity(GO:0015056) corticotropin-releasing hormone receptor activity(GO:0043404)
0.3	8.4	GO:0031435	mitogen-activated protein kinase kinase kinase binding(GO:0031435)
0.3	24.1	GO:0003777	microtubule motor activity(GO:0003777)
0.3	13.4	GO:0005044	scavenger receptor activity(GO:0005044)
0.3	6.3	GO:0042800	histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.2	1.7	GO:0031433	telethonin binding(GO:0031433)
0.2	8.3	GO:0017025	TBP-class protein binding(GO:0017025)
0.2	4.3	GO:0070402	NADPH binding(GO:0070402)
0.2	1.1	GO:0001093	TFIIB-class transcription factor binding(GO:0001093) MRF binding(GO:0043426)
0.2	21.0	GO:0005178	integrin binding(GO:0005178)
0.2	2.6	GO:0035925	miRNA binding(GO:0035198) mRNA 3'-UTR AU-rich region binding(GO:0035925)
0.2	14.5	GO:0051287	NAD binding(GO:0051287)
0.2	0.7	GO:0004185	serine-type carboxypeptidase activity(GO:0004185)
0.2	7.1	GO:0042974	retinoic acid receptor binding(GO:0042974)
0.2	4.8	GO:0017147	Wnt-protein binding(GO:0017147)
0.2	5.0	GO:0050699	WW domain binding(GO:0050699)
0.2	44.4	GO:0030246	carbohydrate binding(GO:0030246)
0.2	17.7	GO:0035326	enhancer binding(GO:0035326)
0.1	9.1	GO:0048306	calcium-dependent protein binding(GO:0048306)
0.1	11.7	GO:0003823	antigen binding(GO:0003823)
0.1	4.1	GO:0001106	RNA polymerase II transcription corepressor activity(GO:0001106)
0.1	1.3	GO:0042577	lipid phosphatase activity(GO:0042577)
0.1	4.2	GO:0031369	translation initiation factor binding(GO:0031369)
0.1	31.6	GO:0015631	tubulin binding(GO:0015631)
0.1	0.3	GO:0034512	box C/D snoRNA binding(GO:0034512)
0.1	4.9	GO:0003684	damaged DNA binding(GO:0003684)
0.1	1.5	GO:0004935	adrenergic receptor activity(GO:0004935)
0.1	3.3	GO:0004402	histone acetyltransferase activity(GO:0004402)
0.1	3.9	GO:0017112	Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.1	9.8	GO:0004222	metalloendopeptidase activity(GO:0004222)
0.1	3.1	GO:0005272	sodium channel activity(GO:0005272)
0.1	1.8	GO:0044183	protein binding involved in protein folding(GO:0044183)
0.1	37.2	GO:0046982	protein heterodimerization activity(GO:0046982)
0.1	0.4	GO:0016174	NAD(P)H oxidase activity(GO:0016174)
0.1	0.3	GO:0047631	adenosine-diphosphatase activity(GO:0043262) ADP-ribose diphosphatase activity(GO:0047631)
0.0	1.1	GO:0008157	protein phosphatase 1 binding(GO:0008157)
0.0	4.8	GO:0019903	protein phosphatase binding(GO:0019903)
0.0	2.5	GO:0001046	core promoter sequence-specific DNA binding(GO:0001046)
0.0	1.5	GO:0003755	peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0	6.4	GO:0044822	mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0	1.4	GO:0001104	RNA polymerase II transcription cofactor activity(GO:0001104)
0.0	11.9	GO:0003682	chromatin binding(GO:0003682)
0.0	0.4	GO:0009982	pseudouridine synthase activity(GO:0009982)
0.0	5.2	GO:0003735	structural constituent of ribosome(GO:0003735)
0.0	0.9	GO:0051082	unfolded protein binding(GO:0051082)
0.0	1.4	GO:0005200	structural constituent of cytoskeleton(GO:0005200)
0.0	3.1	GO:0045296	cadherin binding(GO:0045296)
0.0	0.5	GO:0005245	voltage-gated calcium channel activity(GO:0005245)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.7	35.6	PID P38 GAMMA DELTA PATHWAY	Signaling mediated by p38-gamma and p38-delta
2.6	47.2	SA MMP CYTOKINE CONNECTION	Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.
1.6	45.2	PID INTEGRIN CS PATHWAY	Integrin family cell surface interactions
1.0	23.9	PID S1P META PATHWAY	Sphingosine 1-phosphate (S1P) pathway
0.7	9.4	PID RANBP2 PATHWAY	Sumoylation by RanBP2 regulates transcriptional repression
0.7	14.1	PID LPA4 PATHWAY	LPA4-mediated signaling events
0.6	32.2	SIG BCR SIGNALING PATHWAY	Members of the BCR signaling pathway
0.5	6.2	PID TCR JNK PATHWAY	JNK signaling in the CD4+ TCR pathway
0.4	19.7	PID FANCONI PATHWAY	Fanconi anemia pathway
0.3	9.8	PID INTEGRIN A9B1 PATHWAY	Alpha9 beta1 integrin signaling events
0.3	7.6	ST GAQ PATHWAY	G alpha q Pathway
0.3	18.8	ST FAS SIGNALING PATHWAY	Fas Signaling Pathway
0.1	5.5	PID ATF2 PATHWAY	ATF-2 transcription factor network
0.1	2.5	PID TCR CALCIUM PATHWAY	Calcium signaling in the CD4+ TCR pathway
0.1	6.0	PID MTOR 4PATHWAY	mTOR signaling pathway
0.1	2.3	PID REELIN PATHWAY	Reelin signaling pathway
0.1	4.3	PID TAP63 PATHWAY	Validated transcriptional targets of TAp63 isoforms
0.1	1.1	PID NFAT 3PATHWAY	Role of Calcineurin-dependent NFAT signaling in lymphocytes
0.0	3.8	PID P53 DOWNSTREAM PATHWAY	Direct p53 effectors
0.0	1.1	PID LKB1 PATHWAY	LKB1 signaling events
0.0	1.4	PID RAC1 PATHWAY	RAC1 signaling pathway
0.0	1.1	PID BMP PATHWAY	BMP receptor signaling
0.0	3.6	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.3	14.1	REACTOME OLFACTORY SIGNALING PATHWAY	Genes involved in Olfactory Signaling Pathway
1.7	19.1	REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS	Genes involved in Phosphorylation of CD3 and TCR zeta chains
1.7	78.2	REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL	Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
1.7	17.3	REACTOME PURINE CATABOLISM	Genes involved in Purine catabolism
1.0	19.4	REACTOME GENERATION OF SECOND MESSENGER MOLECULES	Genes involved in Generation of second messenger molecules
0.9	11.4	REACTOME ANDROGEN BIOSYNTHESIS	Genes involved in Androgen biosynthesis
0.8	14.5	REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION	Genes involved in Amino acid synthesis and interconversion (transamination)
0.8	24.1	REACTOME KINESINS	Genes involved in Kinesins
0.7	9.0	REACTOME IL 6 SIGNALING	Genes involved in Interleukin-6 signaling
0.6	19.6	REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS	Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.6	11.3	REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS	Genes involved in Glycogen breakdown (glycogenolysis)
0.5	17.5	REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT	Genes involved in Transport of Mature mRNA Derived from an Intronless Transcript
0.5	11.9	REACTOME RNA POL I PROMOTER OPENING	Genes involved in RNA Polymerase I Promoter Opening
0.4	4.4	REACTOME N GLYCAN TRIMMING IN THE ER AND CALNEXIN CALRETICULIN CYCLE	Genes involved in N-glycan trimming in the ER and Calnexin/Calreticulin cycle
0.4	4.4	REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE	Genes involved in Regulation of Insulin Secretion by Acetylcholine
0.4	11.3	REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 2 PROMOTER	Genes involved in RNA Polymerase III Transcription Initiation From Type 2 Promoter
0.4	8.4	REACTOME TRANSPORT OF MATURE TRANSCRIPT TO CYTOPLASM	Genes involved in Transport of Mature Transcript to Cytoplasm
0.3	9.4	REACTOME MEIOTIC SYNAPSIS	Genes involved in Meiotic Synapsis
0.3	9.3	REACTOME FANCONI ANEMIA PATHWAY	Genes involved in Fanconi Anemia pathway
0.3	4.8	REACTOME CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE	Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase
0.3	3.8	REACTOME MICRORNA MIRNA BIOGENESIS	Genes involved in MicroRNA (miRNA) Biogenesis
0.3	3.7	REACTOME BASE FREE SUGAR PHOSPHATE REMOVAL VIA THE SINGLE NUCLEOTIDE REPLACEMENT PATHWAY	Genes involved in Base-free sugar-phosphate removal via the single-nucleotide replacement pathway
0.3	10.4	REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS	Genes involved in Activation of ATR in response to replication stress
0.2	6.2	REACTOME CD28 DEPENDENT PI3K AKT SIGNALING	Genes involved in CD28 dependent PI3K/Akt signaling
0.2	5.5	REACTOME SYNTHESIS OF PC	Genes involved in Synthesis of PC
0.2	7.8	REACTOME INTERFERON GAMMA SIGNALING	Genes involved in Interferon gamma signaling
0.1	2.1	REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY	Genes involved in Post-chaperonin tubulin folding pathway
0.1	7.6	REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS	Genes involved in Glycerophospholipid biosynthesis
0.1	1.1	REACTOME TRAF3 DEPENDENT IRF ACTIVATION PATHWAY	Genes involved in TRAF3-dependent IRF activation pathway
0.1	2.9	REACTOME ION TRANSPORT BY P TYPE ATPASES	Genes involved in Ion transport by P-type ATPases
0.1	14.0	REACTOME METABOLISM OF CARBOHYDRATES	Genes involved in Metabolism of carbohydrates
0.1	6.0	REACTOME PEPTIDE CHAIN ELONGATION	Genes involved in Peptide chain elongation
0.0	1.0	REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF RAS	Genes involved in CREB phosphorylation through the activation of Ras
0.0	1.1	REACTOME DOWNREGULATION OF TGF BETA RECEPTOR SIGNALING	Genes involved in Downregulation of TGF-beta receptor signaling
0.0	2.3	REACTOME NRAGE SIGNALS DEATH THROUGH JNK	Genes involved in NRAGE signals death through JNK
0.0	1.4	REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION	Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.0	0.2	REACTOME RETROGRADE NEUROTROPHIN SIGNALLING	Genes involved in Retrograde neurotrophin signalling
0.0	1.2	REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS	Genes involved in Class B/2 (Secretin family receptors)