GSE53960: rat RNA-Seq transcriptomic Bodymap
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Cebpe | rn6_v1_chr15_-_33358138_33358138 | -0.04 | 4.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_148119857 Show fit | 101.56 |
ENSRNOT00000040325
|
Cytochrome P450, family 2, subfamily c, polypeptide 7-like |
|
chr14_+_22251499 Show fit | 94.85 |
ENSRNOT00000087991
ENSRNOT00000002705 |
UDP glucuronosyltransferase 2 family, polypeptide A1 |
|
chr1_-_258875572 Show fit | 89.58 |
ENSRNOT00000093005
|
cytochrome P450, family 2, subfamily c, polypeptide 13 |
|
chr15_+_57290849 Show fit | 87.59 |
ENSRNOT00000014909
|
carboxypeptidase B2 |
|
chr19_+_42097995 Show fit | 87.38 |
ENSRNOT00000020197
|
haptoglobin |
|
chr14_+_22517774 Show fit | 86.11 |
ENSRNOT00000047655
|
UDP-glucuronosyltransferase 2 family, member 37 |
|
chr1_+_147713892 Show fit | 75.21 |
ENSRNOT00000092985
ENSRNOT00000054742 ENSRNOT00000074103 |
cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1 |
|
chr4_-_161850875 Show fit | 73.06 |
ENSRNOT00000009467
|
pregnancy-zone protein |
|
chr11_-_81639872 Show fit | 68.33 |
ENSRNOT00000047595
ENSRNOT00000090031 ENSRNOT00000081864 |
histidine-rich glycoprotein |
|
chr3_-_127500709 Show fit | 64.68 |
ENSRNOT00000006330
|
hydroxyacid oxidase 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 1049.9 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
22.5 | 607.2 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
15.9 | 206.2 | GO:0052695 | cellular glucuronidation(GO:0052695) |
32.0 | 128.2 | GO:2000259 | positive regulation of complement activation(GO:0045917) positive regulation of protein activation cascade(GO:2000259) |
39.4 | 118.3 | GO:0003331 | regulation of extracellular matrix constituent secretion(GO:0003330) positive regulation of extracellular matrix constituent secretion(GO:0003331) |
28.1 | 112.5 | GO:0042977 | regulation of activation of JAK2 kinase activity(GO:0010534) activation of JAK2 kinase activity(GO:0042977) negative regulation of activation of JAK2 kinase activity(GO:1902569) |
4.7 | 108.6 | GO:0045780 | positive regulation of bone resorption(GO:0045780) positive regulation of bone remodeling(GO:0046852) |
7.9 | 102.2 | GO:0016127 | cholesterol catabolic process(GO:0006707) sterol catabolic process(GO:0016127) |
29.1 | 87.4 | GO:2000295 | regulation of hydrogen peroxide catabolic process(GO:2000295) |
9.7 | 87.4 | GO:0046618 | drug export(GO:0046618) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 970.9 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.5 | 691.4 | GO:0005615 | extracellular space(GO:0005615) |
4.3 | 468.8 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 227.8 | GO:0016021 | integral component of membrane(GO:0016021) |
0.2 | 210.0 | GO:0005739 | mitochondrion(GO:0005739) |
1.0 | 138.5 | GO:0042579 | peroxisome(GO:0005777) microbody(GO:0042579) |
1.5 | 107.2 | GO:0005581 | collagen trimer(GO:0005581) |
7.9 | 103.1 | GO:0046581 | intercellular canaliculus(GO:0046581) |
1.4 | 92.5 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
21.8 | 87.4 | GO:0031838 | haptoglobin-hemoglobin complex(GO:0031838) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
21.2 | 572.5 | GO:0008392 | arachidonic acid epoxygenase activity(GO:0008392) |
0.6 | 557.6 | GO:0004984 | olfactory receptor activity(GO:0004984) |
14.8 | 459.7 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
1.1 | 453.2 | GO:0005549 | odorant binding(GO:0005549) |
2.5 | 279.2 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
1.2 | 245.8 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
5.7 | 141.5 | GO:0070330 | aromatase activity(GO:0070330) |
9.8 | 118.1 | GO:0016290 | palmitoyl-CoA hydrolase activity(GO:0016290) |
7.1 | 114.0 | GO:0015125 | bile acid transmembrane transporter activity(GO:0015125) |
25.7 | 102.9 | GO:0030294 | receptor signaling protein tyrosine kinase inhibitor activity(GO:0030294) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 407.5 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
3.6 | 195.6 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
4.4 | 136.8 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.6 | 85.3 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
1.6 | 83.8 | PID BMP PATHWAY | BMP receptor signaling |
1.2 | 52.5 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
1.6 | 41.8 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
1.1 | 41.3 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.5 | 37.7 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
2.7 | 34.8 | ST STAT3 PATHWAY | STAT3 Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
14.9 | 283.5 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
1.3 | 193.6 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
7.2 | 150.5 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
5.4 | 144.7 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
10.4 | 125.2 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
10.5 | 115.8 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |
10.3 | 113.5 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
1.3 | 109.1 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
7.4 | 103.9 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
7.4 | 96.4 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |