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GSE53960: rat RNA-Seq transcriptomic Bodymap

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Results for Zfp282

Z-value: 0.51

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Transcription factors associated with Zfp282

Gene Symbol Gene ID Gene Info
ENSRNOG00000026981 zinc finger protein 282

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Zfp282rn6_v1_chr4_+_77554269_775542690.053.9e-01Click!

Activity profile of Zfp282 motif

Sorted Z-values of Zfp282 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr10_+_65566171 16.95 ENSRNOT00000015651
sperm associated antigen 5
chr16_-_48921242 15.97 ENSRNOT00000041596
centromere protein U
chr7_+_140758615 14.20 ENSRNOT00000089448
trophinin associated protein
chr2_-_165641573 13.28 ENSRNOT00000013987
tripartite motif-containing 59
chr20_-_3397039 12.45 ENSRNOT00000001084
ENSRNOT00000085259
protein phosphatase 1, regulatory subunit 18
chr1_-_157700064 12.42 ENSRNOT00000031974
DNA damage-induced apoptosis suppressor
chr4_+_78320190 11.79 ENSRNOT00000032742
ENSRNOT00000091359
GTPase, IMAP family member 4
chr7_-_61798729 10.46 ENSRNOT00000010283
dual specificity tyrosine phosphorylation regulated kinase 2
chr2_+_190073815 10.27 ENSRNOT00000015473
S100 calcium binding protein A8
chr18_+_87415531 9.27 ENSRNOT00000072475

chrX_-_157848842 9.15 ENSRNOT00000035398
family with sequence similarity 122C
chr2_+_187447501 8.95 ENSRNOT00000038589
IQ motif containing GTPase activating protein 3
chr5_+_154522119 7.56 ENSRNOT00000072618
E2F transcription factor 2
chr4_+_30313102 7.27 ENSRNOT00000012657
ankyrin repeat and SOCS box-containing 4
chr10_+_16542882 7.21 ENSRNOT00000028146
stanniocalcin 2
chr1_-_220867815 7.14 ENSRNOT00000028015
MUS81 structure-specific endonuclease subunit
chr10_-_90312386 7.07 ENSRNOT00000028445
solute carrier family 4 member 1
chr14_-_44375804 6.28 ENSRNOT00000042825
ribosomal protein P2-like
chr15_-_34693034 6.06 ENSRNOT00000083314
mast cell protease 8
chr9_+_10760113 5.43 ENSRNOT00000073054
arrestin domain containing 5
chr3_-_132282879 5.31 ENSRNOT00000042040
high-mobility group nucleosomal binding domain 2-like
chr5_+_162127810 5.04 ENSRNOT00000038858
PRAME family member 27
chr15_+_12570062 4.97 ENSRNOT00000010675
THO complex 7
chr14_+_113968563 4.95 ENSRNOT00000006085
clathrin heavy chain linker domain containing 1
chrX_+_78042859 4.73 ENSRNOT00000003286
lysophosphatidic acid receptor 4
chr20_-_46871946 4.61 ENSRNOT00000031047
armadillo repeat containing 2
chr7_-_60743328 4.56 ENSRNOT00000066767
MDM2 proto-oncogene
chr17_-_66667853 4.34 ENSRNOT00000058749
ANKRD26-like family C, member 2
chr8_-_48564722 4.26 ENSRNOT00000067902
Cbl proto-oncogene
chr1_+_97712177 4.22 ENSRNOT00000027745
similar to RIKEN cDNA 4930433I11 gene
chr1_+_72380711 4.16 ENSRNOT00000022236
FLT3-interacting zinc finger 1
chr8_-_90664554 4.06 ENSRNOT00000039917
ENSRNOT00000074896
ENSRNOT00000072225
high mobility group nucleosomal binding domain 3
chr7_-_11777503 3.87 ENSRNOT00000026220
anti-Mullerian hormone
chr2_-_189307108 3.62 ENSRNOT00000028246
ATPase phospholipid transporting 8B2
chr2_+_240527130 3.42 ENSRNOT00000031348
solute carrier family 9 member B1
chr18_-_786674 3.41 ENSRNOT00000021955
centrin 1
chr2_+_27365148 3.11 ENSRNOT00000021549
collagen type IV alpha 3 binding protein
chr3_-_14643897 3.01 ENSRNOT00000082008
ENSRNOT00000025983
glycoprotein, alpha-galactosyltransferase 1
chr9_-_110936631 2.82 ENSRNOT00000064431
F-box and leucine-rich repeat protein 17
chrX_+_96667863 2.68 ENSRNOT00000042552
similar to hypothetical protein 4932411N23
chr1_+_266953139 2.59 ENSRNOT00000054696
neuralized E3 ubiquitin protein ligase 1
chr3_-_151224123 2.52 ENSRNOT00000026091
transient receptor potential cation channel, subfamily C, member 4 associated protein
chr4_+_118167294 2.45 ENSRNOT00000022367
similar to small nuclear ribonucleoprotein polypeptide G
chr1_-_169001761 2.32 ENSRNOT00000048484
hemoglobin, epsilon 2
chr8_+_117694605 2.23 ENSRNOT00000027994
collagen type VII alpha 1 chain
chr1_+_167179452 2.22 ENSRNOT00000045726
short transient receptor potential channel 2-like
chr14_+_44524416 2.21 ENSRNOT00000038927
ribosomal protein L9
chr1_+_85213652 2.16 ENSRNOT00000092044
non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
chr14_+_44524753 2.15 ENSRNOT00000076245
ribosomal protein L9
chrX_-_57058526 2.04 ENSRNOT00000091191

chr8_+_50563047 1.98 ENSRNOT00000025149
zinc finger protein 259
chr1_-_79259492 1.97 ENSRNOT00000043333
pregnancy-specific glycoprotein 29
chr2_+_248276709 1.90 ENSRNOT00000068683
guanylate binding protein 2
chr4_+_66091641 1.88 ENSRNOT00000043147

chr3_+_103753238 1.68 ENSRNOT00000007144
solute carrier family 12, member 6
chr10_+_14828597 1.59 ENSRNOT00000025434
tektin 4
chrX_+_115563038 1.58 ENSRNOT00000087859
ALG13, UDP-N-acetylglucosaminyltransferase subunit
chr1_-_154111725 1.52 ENSRNOT00000055488
coiled-coil domain containing 81
chr9_-_4447715 1.52 ENSRNOT00000061882
lysine acetyltransferase 2B
chr8_-_42365819 1.35 ENSRNOT00000071125
olfactory receptor 8B3-like
chr1_+_172099992 1.27 ENSRNOT00000049763
olfactory receptor 240
chr18_+_40962146 1.25 ENSRNOT00000035656
ADP ribosylation factor like GTPase 14 effector protein like
chr1_-_75354820 1.21 ENSRNOT00000018989
similar to RIKEN cDNA 6330408A02 gene
chr17_-_78499881 1.13 ENSRNOT00000079260
family with sequence similarity 107, member B
chr1_-_86948845 1.09 ENSRNOT00000027212
NFKB inhibitor beta
chr3_-_104504204 1.02 ENSRNOT00000049582
ryanodine receptor 3
chr1_+_187149453 0.97 ENSRNOT00000082738
xylosyltransferase 1
chr4_-_1686845 0.91 ENSRNOT00000073139
olfactory receptor 8B3-like
chr5_-_150653172 0.87 ENSRNOT00000072028
mediator complex subunit 18
chr8_-_68312909 0.86 ENSRNOT00000066106
similar to ENSANGP00000021391
chr14_-_84662143 0.70 ENSRNOT00000057529
ENSRNOT00000080078
HORMA domain containing 2
chr6_-_21880003 0.66 ENSRNOT00000006505
tetratricopeptide repeat domain 27
chr17_-_5463158 0.60 ENSRNOT00000090032
N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr8_-_54994871 0.60 ENSRNOT00000013014
testis expressed 12
chr7_-_5106708 0.52 ENSRNOT00000046001
olfactory receptor 892
chrX_-_1786978 0.52 ENSRNOT00000011317
RNA binding motif protein 10
chr19_+_38601786 0.47 ENSRNOT00000087655
zinc finger protein 90
chr1_+_172129514 0.45 ENSRNOT00000041658
olfactory receptor 241
chr10_-_44243402 0.43 ENSRNOT00000058517
similar to Robo-1
chr12_-_43503456 0.39 ENSRNOT00000078445
mediator complex subunit 13-like
chr8_-_37093082 0.32 ENSRNOT00000072767
prostate and testis expressed protein F
chr20_+_29558689 0.28 ENSRNOT00000085229
activating signal cointegrator 1 complex subunit 1
chr1_-_197982601 0.25 ENSRNOT00000025782
eukaryotic translation initiation factor 3, subunit C
chr8_-_118926613 0.15 ENSRNOT00000056130
neurobeachin-like 2
chr1_-_7443863 0.13 ENSRNOT00000088558
phosphatase and actin regulator 2
chr9_+_99720856 0.09 ENSRNOT00000047487
olfactory receptor 1346

Network of associatons between targets according to the STRING database.

First level regulatory network of Zfp282

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 7.1 GO:0072429 response to intra-S DNA damage checkpoint signaling(GO:0072429)
1.5 4.6 GO:0007089 traversing start control point of mitotic cell cycle(GO:0007089) response to formaldehyde(GO:1904404)
1.4 7.1 GO:0010037 response to carbon dioxide(GO:0010037)
1.3 3.9 GO:0048162 preantral ovarian follicle growth(GO:0001546) multi-layer follicle stage(GO:0048162)
1.3 7.6 GO:1990086 lens fiber cell apoptotic process(GO:1990086)
1.2 12.4 GO:2000270 negative regulation of fibroblast apoptotic process(GO:2000270)
1.2 10.5 GO:0051534 negative regulation of NFAT protein import into nucleus(GO:0051534)
1.0 16.4 GO:0051988 regulation of attachment of spindle microtubules to kinetochore(GO:0051988)
1.0 3.0 GO:0033575 protein glycosylation at cell surface(GO:0033575) protein galactosylation at cell surface(GO:0033580) protein galactosylation(GO:0042125)
0.7 9.0 GO:0033601 positive regulation of mammary gland epithelial cell proliferation(GO:0033601)
0.6 3.1 GO:0035627 ceramide transport(GO:0035627)
0.6 10.3 GO:0017014 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119)
0.6 13.3 GO:0046597 negative regulation of viral entry into host cell(GO:0046597)
0.6 1.7 GO:0042539 hypotonic salinity response(GO:0042539) cellular hypotonic salinity response(GO:0071477)
0.5 7.3 GO:2001214 positive regulation of vasculogenesis(GO:2001214)
0.5 1.5 GO:0018076 N-terminal peptidyl-lysine acetylation(GO:0018076)
0.5 2.0 GO:0001834 trophectodermal cell proliferation(GO:0001834) Cajal body organization(GO:0030576)
0.5 7.2 GO:2001256 regulation of store-operated calcium entry(GO:2001256)
0.4 5.0 GO:0046784 viral mRNA export from host cell nucleus(GO:0046784)
0.4 4.3 GO:0090649 response to oxygen-glucose deprivation(GO:0090649) cellular response to oxygen-glucose deprivation(GO:0090650)
0.3 1.6 GO:0080154 regulation of fertilization(GO:0080154)
0.2 2.2 GO:0000012 single strand break repair(GO:0000012)
0.2 2.6 GO:0007288 sperm axoneme assembly(GO:0007288)
0.2 10.6 GO:0002181 cytoplasmic translation(GO:0002181)
0.2 1.6 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.2 2.3 GO:0015671 oxygen transport(GO:0015671)
0.1 4.7 GO:0035025 positive regulation of Rho protein signal transduction(GO:0035025)
0.1 1.9 GO:0044406 adhesion of symbiont to host(GO:0044406)
0.1 3.6 GO:0045332 phospholipid translocation(GO:0045332)
0.1 2.5 GO:0048820 hair follicle maturation(GO:0048820)
0.1 1.1 GO:0007253 cytoplasmic sequestering of NF-kappaB(GO:0007253)
0.1 0.6 GO:0000711 meiotic DNA repair synthesis(GO:0000711)
0.1 1.0 GO:0030206 chondroitin sulfate biosynthetic process(GO:0030206)
0.1 0.7 GO:0045144 meiotic sister chromatid segregation(GO:0045144) meiotic sister chromatid cohesion(GO:0051177)
0.1 0.2 GO:0070889 platelet alpha granule organization(GO:0070889)
0.1 2.4 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.1 0.2 GO:1902416 positive regulation of mRNA binding(GO:1902416)
0.1 4.1 GO:0061178 regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061178)
0.1 3.4 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.5 GO:0034393 positive regulation of smooth muscle cell apoptotic process(GO:0034393)
0.0 2.2 GO:0035987 endodermal cell differentiation(GO:0035987)
0.0 3.4 GO:0030317 sperm motility(GO:0030317)
0.0 0.6 GO:0006474 N-terminal protein amino acid acetylation(GO:0006474)
0.0 1.0 GO:0051481 negative regulation of cytosolic calcium ion concentration(GO:0051481)
0.0 0.5 GO:0043392 negative regulation of DNA binding(GO:0043392)
0.0 9.6 GO:0043009 chordate embryonic development(GO:0043009)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 7.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.9 7.3 GO:0031466 Cul5-RING ubiquitin ligase complex(GO:0031466)
0.5 17.0 GO:0035371 microtubule plus-end(GO:0035371)
0.5 5.0 GO:0000445 THO complex(GO:0000347) THO complex part of transcription export complex(GO:0000445)
0.5 13.3 GO:0030992 intraciliary transport particle B(GO:0030992)
0.5 1.9 GO:0020005 symbiont-containing vacuole membrane(GO:0020005)
0.4 1.6 GO:0043541 UDP-N-acetylglucosamine transferase complex(GO:0043541)
0.4 4.3 GO:0016600 flotillin complex(GO:0016600)
0.3 2.0 GO:0097504 Gemini of coiled bodies(GO:0097504)
0.3 2.5 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.2 16.0 GO:0000777 condensed chromosome kinetochore(GO:0000777)
0.2 2.3 GO:0005833 hemoglobin complex(GO:0005833)
0.2 2.4 GO:0005687 U4 snRNP(GO:0005687)
0.2 5.0 GO:0097228 sperm principal piece(GO:0097228)
0.2 0.6 GO:0031417 NatC complex(GO:0031417)
0.1 9.0 GO:0016328 lateral plasma membrane(GO:0016328)
0.1 1.1 GO:0033256 I-kappaB/NF-kappaB complex(GO:0033256)
0.1 1.0 GO:0030314 junctional membrane complex(GO:0030314)
0.1 7.1 GO:0014704 intercalated disc(GO:0014704)
0.1 10.6 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 3.4 GO:0032391 photoreceptor connecting cilium(GO:0032391)
0.1 2.6 GO:0097440 apical dendrite(GO:0097440)
0.1 1.5 GO:0005671 Ada2/Gcn5/Ada3 transcription activator complex(GO:0005671)
0.1 10.3 GO:0045111 intermediate filament cytoskeleton(GO:0045111)
0.0 0.6 GO:0000801 central element(GO:0000801)
0.0 3.0 GO:0032580 Golgi cisterna membrane(GO:0032580)
0.0 3.1 GO:0005581 collagen trimer(GO:0005581)
0.0 0.2 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 1.3 GO:0016592 mediator complex(GO:0016592)
0.0 2.2 GO:0005604 basement membrane(GO:0005604)
0.0 6.0 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.0 7.8 GO:0005667 transcription factor complex(GO:0005667)
0.0 0.7 GO:0000795 synaptonemal complex(GO:0000795)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 10.3 GO:0035662 Toll-like receptor 4 binding(GO:0035662)
1.5 9.0 GO:0032027 myosin light chain binding(GO:0032027)
1.2 4.7 GO:0070915 lysophosphatidic acid binding(GO:0035727) lysophosphatidic acid receptor activity(GO:0070915)
0.8 7.1 GO:0048256 flap endonuclease activity(GO:0048256)
0.8 4.6 GO:0019788 NEDD8 transferase activity(GO:0019788)
0.8 3.0 GO:0047276 N-acetyllactosaminide 3-alpha-galactosyltransferase activity(GO:0047276)
0.7 3.4 GO:0032795 heterotrimeric G-protein binding(GO:0032795)
0.5 3.1 GO:0046624 sphingolipid transporter activity(GO:0046624)
0.4 1.7 GO:0035827 rubidium ion transmembrane transporter activity(GO:0035827)
0.3 7.1 GO:0015106 bicarbonate transmembrane transporter activity(GO:0015106)
0.3 1.0 GO:0030158 protein xylosyltransferase activity(GO:0030158)
0.3 1.0 GO:0005219 ryanodine-sensitive calcium-release channel activity(GO:0005219)
0.3 4.3 GO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312)
0.2 1.5 GO:0004468 lysine N-acetyltransferase activity, acting on acetyl phosphate as donor(GO:0004468)
0.2 3.4 GO:0015299 solute:proton antiporter activity(GO:0015299)
0.2 10.5 GO:0030145 manganese ion binding(GO:0030145)
0.2 3.6 GO:0004012 phospholipid-translocating ATPase activity(GO:0004012)
0.2 2.3 GO:0005344 oxygen transporter activity(GO:0005344)
0.1 2.2 GO:0015279 store-operated calcium channel activity(GO:0015279)
0.1 4.1 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 24.0 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.1 6.1 GO:0030971 receptor tyrosine kinase binding(GO:0030971)
0.1 11.1 GO:0005179 hormone activity(GO:0005179)
0.1 4.4 GO:0019843 rRNA binding(GO:0019843)
0.1 15.0 GO:0019902 phosphatase binding(GO:0019902)
0.0 0.6 GO:0004596 peptide alpha-N-acetyltransferase activity(GO:0004596)
0.0 7.6 GO:0001047 core promoter binding(GO:0001047)
0.0 1.6 GO:0008375 acetylglucosaminyltransferase activity(GO:0008375)
0.0 1.1 GO:0051059 NF-kappaB binding(GO:0051059)
0.0 13.7 GO:0005525 GTP binding(GO:0005525)
0.0 6.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 6.1 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 11.7 GO:0004672 protein kinase activity(GO:0004672)
0.0 0.4 GO:0004993 G-protein coupled serotonin receptor activity(GO:0004993) serotonin receptor activity(GO:0099589)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 12.1 SA G1 AND S PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.
0.4 10.3 PID TOLL ENDOGENOUS PATHWAY Endogenous TLR signaling
0.3 3.9 PID ALK2 PATHWAY ALK2 signaling events
0.2 4.7 PID LPA4 PATHWAY LPA4-mediated signaling events
0.2 12.0 PID P53 REGULATION PATHWAY p53 pathway
0.2 13.3 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.2 4.3 PID IL8 CXCR1 PATHWAY IL8- and CXCR1-mediated signaling events
0.2 9.0 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 2.2 PID SYNDECAN 1 PATHWAY Syndecan-1-mediated signaling events
0.0 1.1 ST GAQ PATHWAY G alpha q Pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 7.6 REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX Genes involved in CDC6 association with the ORC:origin complex
0.4 4.7 REACTOME P2Y RECEPTORS Genes involved in P2Y receptors
0.3 4.3 REACTOME IL 6 SIGNALING Genes involved in Interleukin-6 signaling
0.3 4.6 REACTOME AKT PHOSPHORYLATES TARGETS IN THE CYTOSOL Genes involved in AKT phosphorylates targets in the cytosol
0.1 1.5 REACTOME NOTCH HLH TRANSCRIPTION PATHWAY Genes involved in Notch-HLH transcription pathway
0.1 3.1 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.1 8.8 REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides
0.1 1.1 REACTOME RIP MEDIATED NFKB ACTIVATION VIA DAI Genes involved in RIP-mediated NFkB activation via DAI
0.1 1.6 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.0 4.4 REACTOME PEPTIDE CHAIN ELONGATION Genes involved in Peptide chain elongation
0.0 2.2 REACTOME COLLAGEN FORMATION Genes involved in Collagen formation
0.0 1.9 REACTOME INTERFERON GAMMA SIGNALING Genes involved in Interferon gamma signaling
0.0 7.3 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0 0.2 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.0 1.3 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.0 0.6 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis