GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Foxd1 Links NCBI RGD Ensembl	ENSRNOG00000043332	forkhead box D1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Foxd1	rn6_v1_chr2_+_28460068_28460068	-0.11	5.4e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr7_+_58814805 Show fit	39.11	ENSRNOT00000005909	Tspan8 Links NCBI RGD Ensembl Show fit	tetraspanin 8
chr5_+_152533349 Show fit	38.89	ENSRNOT00000067524	Trim63 Links NCBI RGD Ensembl Show fit	tripartite motif containing 63
chr2_+_198683159 Show fit	33.96	ENSRNOT00000028793	Txnip Links NCBI RGD Ensembl Show fit	thioredoxin interacting protein
chr1_+_225184939 Show fit	27.91	ENSRNOT00000079456	Ahnak Links NCBI RGD Ensembl Show fit	AHNAK nucleoprotein
chr17_+_81922329 Show fit	26.78	ENSRNOT00000031542	Cacnb2 Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel auxiliary subunit beta 2
chr14_+_83560541 Show fit	24.62	ENSRNOT00000057738 ENSRNOT00000085228	Pik3ip1 Links NCBI RGD Ensembl Show fit	phosphoinositide-3-kinase interacting protein 1
chr4_+_169161585 Show fit	23.15	ENSRNOT00000079785	Emp1 Links NCBI RGD Ensembl Show fit	epithelial membrane protein 1
chr16_-_61091169 Show fit	22.97	ENSRNOT00000016328	Dusp4 Links NCBI RGD Ensembl Show fit	dual specificity phosphatase 4
chr4_+_169147243 Show fit	22.96	ENSRNOT00000011580	Emp1 Links NCBI RGD Ensembl Show fit	epithelial membrane protein 1
chr20_-_4863011 Show fit	22.10	ENSRNOT00000079503	Ltb Links NCBI RGD Ensembl Show fit	lymphotoxin beta
chr20_-_4863198 Show fit	21.70	ENSRNOT00000001108	Ltb Links NCBI RGD Ensembl Show fit	lymphotoxin beta
chr1_+_68436593 Show fit	21.67	ENSRNOT00000080325	LOC108348118 Links NCBI RGD Ensembl Show fit	leucyl-cystinyl aminopeptidase
chr1_-_31055453 Show fit	21.54	ENSRNOT00000031083	Soga3 Links NCBI RGD Ensembl Show fit	SOGA family member 3
chr1_-_59347472 Show fit	21.35	ENSRNOT00000017718	Lnpep Links NCBI RGD Ensembl Show fit	leucyl and cystinyl aminopeptidase
chr20_+_5184515 Show fit	21.33	ENSRNOT00000089411	LOC103694381 Links NCBI RGD Ensembl Show fit	lymphotoxin-beta
chr1_+_68436917 Show fit	20.84	ENSRNOT00000088586	LOC108348118 Links NCBI RGD Ensembl Show fit	leucyl-cystinyl aminopeptidase
chr7_+_120580743 Show fit	20.62	ENSRNOT00000017181	Maff Links NCBI RGD Ensembl Show fit	MAF bZIP transcription factor F
chr1_-_215536980 Show fit	20.19	ENSRNOT00000027344	Ifitm10 Links NCBI RGD Ensembl Show fit	interferon induced transmembrane protein 10
chr3_-_72219246 Show fit	19.37	ENSRNOT00000009903	Smtnl1 Links NCBI RGD Ensembl Show fit	smoothelin-like 1
chr1_-_254735548 Show fit	19.30	ENSRNOT00000025258	Ankrd1 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 1
chr20_+_29655226 Show fit	18.34	ENSRNOT00000089059	Spock2 Links NCBI RGD Ensembl Show fit	SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2
chr7_-_98197087 Show fit	17.84	ENSRNOT00000010484 ENSRNOT00000079961	Klhl38 Links NCBI RGD Ensembl Show fit	kelch-like family member 38
chr13_+_97838361 Show fit	17.41	ENSRNOT00000003641	Cnst Links NCBI RGD Ensembl Show fit	consortin, connexin sorting protein
chr8_+_104040934 Show fit	17.27	ENSRNOT00000081204	Tfdp2 Links NCBI RGD Ensembl Show fit	transcription factor Dp-2
chr8_+_65733400 Show fit	16.73	ENSRNOT00000089126	Uaca Links NCBI RGD Ensembl Show fit	uveal autoantigen with coiled-coil domains and ankyrin repeats
chr7_+_121841855 Show fit	16.50	ENSRNOT00000024673	Grap2 Links NCBI RGD Ensembl Show fit	GRB2-related adaptor protein 2
chr1_-_90520012 Show fit	15.96	ENSRNOT00000028698	Kctd15 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 15
chr18_-_5314511 Show fit	15.23	ENSRNOT00000022637 ENSRNOT00000079682	Zfp521 Links NCBI RGD Ensembl Show fit	zinc finger protein 521
chr8_-_109560747 Show fit	15.16	ENSRNOT00000087334	Ppp2r3a Links NCBI RGD Ensembl Show fit	protein phosphatase 2, regulatory subunit B'', alpha
chr18_+_65155685 Show fit	14.50	ENSRNOT00000081797	Tcf4 Links NCBI RGD Ensembl Show fit	transcription factor 4
chr11_+_82194657 Show fit	14.35	ENSRNOT00000002445	Etv5 Links NCBI RGD Ensembl Show fit	ets variant 5
chr10_+_105393072 Show fit	14.00	ENSRNOT00000013359	Ubald2 Links NCBI RGD Ensembl Show fit	UBA-like domain containing 2
chr5_+_113725717 Show fit	13.96	ENSRNOT00000032248	Tek Links NCBI RGD Ensembl Show fit	TEK receptor tyrosine kinase
chr1_-_90520344 Show fit	13.55	ENSRNOT00000078598	Kctd15 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 15
chr7_-_139318455 Show fit	13.20	ENSRNOT00000092029	Hdac7 Links NCBI RGD Ensembl Show fit	histone deacetylase 7
chr1_+_198210525 Show fit	12.64	ENSRNOT00000026755	Ypel3 Links NCBI RGD Ensembl Show fit	yippee-like 3
chr4_-_30556814 Show fit	12.14	ENSRNOT00000012760	Pdk4 Links NCBI RGD Ensembl Show fit	pyruvate dehydrogenase kinase 4
chr18_+_3887419 Show fit	11.56	ENSRNOT00000093089	Lama3 Links NCBI RGD Ensembl Show fit	laminin subunit alpha 3
chr13_-_1946508 Show fit	11.53	ENSRNOT00000043890	Dsel Links NCBI RGD Ensembl Show fit	dermatan sulfate epimerase-like
chr9_-_38196273 Show fit	11.40	ENSRNOT00000044452	Dst Links NCBI RGD Ensembl Show fit	dystonin
chr8_-_104593625 Show fit	11.32	ENSRNOT00000016625	Zbtb38 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 38
chr10_+_18996523 Show fit	10.96	ENSRNOT00000046135	Lcp2 Links NCBI RGD Ensembl Show fit	lymphocyte cytosolic protein 2
chr15_-_95514259 Show fit	10.29	ENSRNOT00000038433	Slitrk6 Links NCBI RGD Ensembl Show fit	SLIT and NTRK-like family, member 6
chr2_+_41467064 Show fit	10.05	ENSRNOT00000073231	AABR07008066.2 Links NCBI RGD Ensembl Show fit
chrX_+_71155601 Show fit	10.02	ENSRNOT00000076453 ENSRNOT00000048521	Foxo4 Links NCBI RGD Ensembl Show fit	forkhead box O4
chr6_-_124735741 Show fit	9.85	ENSRNOT00000064716 ENSRNOT00000091693	Rps6ka5 Links NCBI RGD Ensembl Show fit	ribosomal protein S6 kinase A5
chr19_-_26094756 Show fit	9.63	ENSRNOT00000067780	Junb Links NCBI RGD Ensembl Show fit	JunB proto-oncogene, AP-1 transcription factor subunit
chr20_-_4390436 Show fit	9.41	ENSRNOT00000000497 ENSRNOT00000077655	Ppt2 Links NCBI RGD Ensembl Show fit	palmitoyl-protein thioesterase 2
chr17_-_22143324 Show fit	8.97	ENSRNOT00000019361	Edn1 Links NCBI RGD Ensembl Show fit	endothelin 1
chr6_-_77421286 Show fit	8.93	ENSRNOT00000011453	Nkx2-1 Links NCBI RGD Ensembl Show fit	NK2 homeobox 1
chr2_-_250232295 Show fit	8.85	ENSRNOT00000082132	Lmo4 Links NCBI RGD Ensembl Show fit	LIM domain only 4
chr1_+_137014272 Show fit	8.83	ENSRNOT00000014802	Akap13 Links NCBI RGD Ensembl Show fit	A-kinase anchoring protein 13
chr15_-_37983882 Show fit	8.79	ENSRNOT00000087978	Lats2 Links NCBI RGD Ensembl Show fit	large tumor suppressor kinase 2
chr6_+_93462852 Show fit	8.79	ENSRNOT00000089473	Arid4a Links NCBI RGD Ensembl Show fit	AT-rich interaction domain 4A
chr15_+_8730871 Show fit	8.70	ENSRNOT00000081845	Nr1d2 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 1, group D, member 2
chr4_-_157433467 Show fit	8.65	ENSRNOT00000028965	Lag3 Links NCBI RGD Ensembl Show fit	lymphocyte activating 3
chr1_+_274049533 Show fit	8.46	ENSRNOT00000076779 ENSRNOT00000042822	Mxi1 Links NCBI RGD Ensembl Show fit	MAX interactor 1, dimerization protein
chr1_-_206282575 Show fit	8.38	ENSRNOT00000024974	Adam12 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 12
chr5_-_50075454 Show fit	8.25	ENSRNOT00000011085	Orc3 Links NCBI RGD Ensembl Show fit	origin recognition complex, subunit 3
chr4_-_40136061 Show fit	8.09	ENSRNOT00000009752	Bmt2 Links NCBI RGD Ensembl Show fit	base methyltransferase of 25S rRNA 2 homolog
chr10_-_90307658 Show fit	7.75	ENSRNOT00000092102	Slc4a1 Links NCBI RGD Ensembl Show fit	solute carrier family 4 member 1
chr3_+_177351518 Show fit	7.73	ENSRNOT00000023989	Pcmtd2 Links NCBI RGD Ensembl Show fit	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr6_+_27768943 Show fit	7.56	ENSRNOT00000015820	Kif3c Links NCBI RGD Ensembl Show fit	kinesin family member 3C
chr2_-_250241590 Show fit	7.49	ENSRNOT00000077221 ENSRNOT00000067502	Lmo4 Links NCBI RGD Ensembl Show fit	LIM domain only 4
chr8_+_11931767 Show fit	7.36	ENSRNOT00000087963	Maml2 Links NCBI RGD Ensembl Show fit	mastermind-like transcriptional coactivator 2
chr2_-_250235435 Show fit	7.30	ENSRNOT00000088618	Lmo4 Links NCBI RGD Ensembl Show fit	LIM domain only 4
chr13_-_113872097 Show fit	7.20	ENSRNOT00000010799 ENSRNOT00000084320	Cr1l Links NCBI RGD Ensembl Show fit	complement C3b/C4b receptor 1 like
chr1_-_100845392 Show fit	7.00	ENSRNOT00000027436	Tbc1d17 Links NCBI RGD Ensembl Show fit	TBC1 domain family, member 17
chr1_-_134870255 Show fit	6.99	ENSRNOT00000055829	Chd2 Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 2
chr8_+_77107536 Show fit	6.82	ENSRNOT00000083255	Adam10 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 10
chrX_-_15627235 Show fit	6.76	ENSRNOT00000013369	Wdr45 Links NCBI RGD Ensembl Show fit	WD repeat domain 45
chr17_-_9721542 Show fit	6.54	ENSRNOT00000047958 ENSRNOT00000079063	Grk6 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor kinase 6
chr15_+_108956448 Show fit	6.54	ENSRNOT00000046324	AC123185.1 Links NCBI RGD Ensembl Show fit
chr13_-_113871842 Show fit	6.50	ENSRNOT00000079549	Cr1l Links NCBI RGD Ensembl Show fit	complement C3b/C4b receptor 1 like
chr10_-_72556564 Show fit	6.40	ENSRNOT00000048373	AABR07030162.1 Links NCBI RGD Ensembl Show fit
chr10_-_40296470 Show fit	6.33	ENSRNOT00000086456	Tnip1 Links NCBI RGD Ensembl Show fit	TNFAIP3 interacting protein 1
chr3_-_2453933 Show fit	6.30	ENSRNOT00000014060	Slc34a3 Links NCBI RGD Ensembl Show fit	solute carrier family 34 member 3
chr1_+_100845563 Show fit	6.17	ENSRNOT00000027478	Akt1s1 Links NCBI RGD Ensembl Show fit	AKT1 substrate 1
chr8_-_116469915 Show fit	6.10	ENSRNOT00000024193	Sema3f Links NCBI RGD Ensembl Show fit	semaphorin 3F
chr2_-_235951275 Show fit	6.05	ENSRNOT00000050291	AABR07013410.1 Links NCBI RGD Ensembl Show fit
chr1_+_240908483 Show fit	5.96	ENSRNOT00000019367	Klf9 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 9
chr3_-_46051096 Show fit	5.74	ENSRNOT00000081302	Baz2b Links NCBI RGD Ensembl Show fit	bromodomain adjacent to zinc finger domain, 2B
chr4_-_17594598 Show fit	5.72	ENSRNOT00000008936	Sema3e Links NCBI RGD Ensembl Show fit	semaphorin 3E
chr7_+_99954492 Show fit	5.72	ENSRNOT00000005885	Trib1 Links NCBI RGD Ensembl Show fit	tribbles pseudokinase 1
chr4_-_115239723 Show fit	5.68	ENSRNOT00000042699	Actg2 Links NCBI RGD Ensembl Show fit	actin, gamma 2, smooth muscle, enteric
chr8_-_36438730 Show fit	5.56	ENSRNOT00000015366	Fam118b Links NCBI RGD Ensembl Show fit	family with sequence similarity 118, member B
chr16_-_20807070 Show fit	5.51	ENSRNOT00000072536	Comp Links NCBI RGD Ensembl Show fit	cartilage oligomeric matrix protein
chr4_-_61502778 Show fit	5.15	ENSRNOT00000051232	AABR07060190.1 Links NCBI RGD Ensembl Show fit
chr3_-_58009514 Show fit	5.10	ENSRNOT00000048356	AABR07052498.1 Links NCBI RGD Ensembl Show fit
chr13_+_51240911 Show fit	5.09	ENSRNOT00000005551	Adipor1 Links NCBI RGD Ensembl Show fit	adiponectin receptor 1
chr1_+_254974789 Show fit	4.94	ENSRNOT00000025020	Pcgf5 Links NCBI RGD Ensembl Show fit	polycomb group ring finger 5
chr3_+_120726906 Show fit	4.93	ENSRNOT00000051069	Bcl2l11 Links NCBI RGD Ensembl Show fit	BCL2 like 11
chr2_+_54897424 Show fit	4.92	ENSRNOT00000017665	Ttc33 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 33
chr4_+_157594436 Show fit	4.89	ENSRNOT00000029053	Lpar5 Links NCBI RGD Ensembl Show fit	lysophosphatidic acid receptor 5
chr18_-_69671199 Show fit	4.79	ENSRNOT00000082484	Smad4 Links NCBI RGD Ensembl Show fit	SMAD family member 4
chr1_+_260798239 Show fit	4.75	ENSRNOT00000036791	Lcor Links NCBI RGD Ensembl Show fit	ligand dependent nuclear receptor corepressor
chr17_-_74679696 Show fit	4.73	ENSRNOT00000048420	AABR07028558.1 Links NCBI RGD Ensembl Show fit
chr16_-_32299542 Show fit	4.66	ENSRNOT00000072321	AABR07025299.1 Links NCBI RGD Ensembl Show fit
chr17_-_84705052 Show fit	4.54	ENSRNOT00000050803	AABR07028749.1 Links NCBI RGD Ensembl Show fit
chr2_-_208225888 Show fit	4.45	ENSRNOT00000054860	AABR07012775.1 Links NCBI RGD Ensembl Show fit
chr14_-_3351553 Show fit	4.40	ENSRNOT00000061556	Btbd8 Links NCBI RGD Ensembl Show fit	BTB (POZ) domain containing 8
chr4_+_41364441 Show fit	4.36	ENSRNOT00000087146	Foxp2 Links NCBI RGD Ensembl Show fit	forkhead box P2
chr7_+_139271698 Show fit	4.29	ENSRNOT00000079388	Slc48a1 Links NCBI RGD Ensembl Show fit	solute carrier family 48 member 1
chr8_+_111209908 Show fit	4.29	ENSRNOT00000090221	Amotl2 Links NCBI RGD Ensembl Show fit	angiomotin like 2
chr13_-_30800451 Show fit	4.28	ENSRNOT00000046791	Rpl21 Links NCBI RGD Ensembl Show fit	ribosomal protein L21
chr3_-_148932878 Show fit	4.23	ENSRNOT00000013881	Nol4l Links NCBI RGD Ensembl Show fit	nucleolar protein 4-like
chr9_+_43093138 Show fit	4.09	ENSRNOT00000021592	Cnnm3 Links NCBI RGD Ensembl Show fit	cyclin and CBS domain divalent metal cation transport mediator 3
chrX_-_20359945 Show fit	4.08	ENSRNOT00000049138	AABR07037412.1 Links NCBI RGD Ensembl Show fit
chr6_+_73553210 Show fit	4.03	ENSRNOT00000006562	Akap6 Links NCBI RGD Ensembl Show fit	A-kinase anchoring protein 6
chr18_+_27558089 Show fit	3.98	ENSRNOT00000027499	Fam53c Links NCBI RGD Ensembl Show fit	family with sequence similarity 53, member C
chr9_+_61720583 Show fit	3.96	ENSRNOT00000020536	Mob4 Links NCBI RGD Ensembl Show fit	MOB family member 4, phocein
chr4_+_83713666 Show fit	3.95	ENSRNOT00000086473	Creb5 Links NCBI RGD Ensembl Show fit	cAMP responsive element binding protein 5
chr20_+_3823596 Show fit	3.92	ENSRNOT00000087670	Rxrb Links NCBI RGD Ensembl Show fit	retinoid X receptor beta
chr10_-_90501819 Show fit	3.86	ENSRNOT00000050474	Gpatch8 Links NCBI RGD Ensembl Show fit	G patch domain containing 8
chr7_+_70753101 Show fit	3.82	ENSRNOT00000090001	R3hdm2 Links NCBI RGD Ensembl Show fit	R3H domain containing 2
chrX_-_111887906 Show fit	3.61	ENSRNOT00000085118	Tsc22d3 Links NCBI RGD Ensembl Show fit	TSC22 domain family, member 3
chr2_+_31378743 Show fit	3.56	ENSRNOT00000050384	AABR07007853.1 Links NCBI RGD Ensembl Show fit
chr1_-_13395370 Show fit	3.56	ENSRNOT00000085519	Ccdc28a Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 28A
chr6_+_8220228 Show fit	3.55	ENSRNOT00000079279 ENSRNOT00000048656	Ppm1b Links NCBI RGD Ensembl Show fit	protein phosphatase, Mg2+/Mn2+ dependent, 1B
chrX_+_128493614 Show fit	3.43	ENSRNOT00000044240	Stag2 Links NCBI RGD Ensembl Show fit	stromal antigen 2
chr20_+_5262946 Show fit	3.38	ENSRNOT00000082900	Brd2 Links NCBI RGD Ensembl Show fit	bromodomain containing 2
chr19_-_52206310 Show fit	3.34	ENSRNOT00000087886	Mbtps1 Links NCBI RGD Ensembl Show fit	membrane-bound transcription factor peptidase, site 1
chr9_-_86103158 Show fit	3.30	ENSRNOT00000021528	Cul3 Links NCBI RGD Ensembl Show fit	cullin 3
chr18_+_29972808 Show fit	3.30	ENSRNOT00000074051	Pcdha4 Links NCBI RGD Ensembl Show fit	protocadherin alpha 4
chr6_+_108167716 Show fit	3.22	ENSRNOT00000064426	Lin52 Links NCBI RGD Ensembl Show fit	lin-52 DREAM MuvB core complex component
chrX_+_159513800 Show fit	3.17	ENSRNOT00000065636	Htatsf1 Links NCBI RGD Ensembl Show fit	HIV-1 Tat specific factor 1
chr1_-_222590112 Show fit	3.13	ENSRNOT00000028763 ENSRNOT00000091990	Mark2 Links NCBI RGD Ensembl Show fit	microtubule affinity regulating kinase 2
chr5_-_157165767 Show fit	3.11	ENSRNOT00000000167	Ubxn10 Links NCBI RGD Ensembl Show fit	UBX domain protein 10
chr1_-_246110218 Show fit	3.11	ENSRNOT00000077544	Rfx3 Links NCBI RGD Ensembl Show fit	regulatory factor X3
chr7_-_12457513 Show fit	3.06	ENSRNOT00000060683	Stk11 Links NCBI RGD Ensembl Show fit	serine/threonine kinase 11
chr7_-_137856485 Show fit	3.05	ENSRNOT00000007003	LOC688906 Links NCBI RGD Ensembl Show fit	similar to splicing factor, arginine/serine-rich 2, interacting protein
chr1_-_24302298 Show fit	2.93	ENSRNOT00000083452	Sgk1 Links NCBI RGD Ensembl Show fit	serum/glucocorticoid regulated kinase 1
chr13_-_98480419 Show fit	2.89	ENSRNOT00000086306	Coq8a Links NCBI RGD Ensembl Show fit	coenzyme Q8A
chr4_-_183426439 Show fit	2.78	ENSRNOT00000083310	Fam60a Links NCBI RGD Ensembl Show fit	family with sequence similarity 60, member A
chr19_+_33130303 Show fit	2.70	ENSRNOT00000048673	LOC102550668 Links NCBI RGD Ensembl Show fit	60S ribosomal protein L21-like
chr13_-_101697684 Show fit	2.66	ENSRNOT00000078834	Brox Links NCBI RGD Ensembl Show fit	BRO1 domain and CAAX motif containing
chr18_-_410098 Show fit	2.65	ENSRNOT00000084138	LOC102546764 Links NCBI RGD Ensembl Show fit	cx9C motif-containing protein 4-like
chr8_-_117446019 Show fit	2.65	ENSRNOT00000042577	Arih2 Links NCBI RGD Ensembl Show fit	ariadne RBR E3 ubiquitin protein ligase 2
chr10_-_109267500 Show fit	2.64	ENSRNOT00000005977	Cep131 Links NCBI RGD Ensembl Show fit	centrosomal protein 131
chr13_-_68360664 Show fit	2.61	ENSRNOT00000030971	Hmcn1 Links NCBI RGD Ensembl Show fit	hemicentin 1
chr7_+_74047814 Show fit	2.55	ENSRNOT00000014879	Osr2 Links NCBI RGD Ensembl Show fit	odd-skipped related transciption factor 2
chr10_-_87136026 Show fit	2.52	ENSRNOT00000014230 ENSRNOT00000083233	Smarce1 Links NCBI RGD Ensembl Show fit	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
chr2_-_98610368 Show fit	2.48	ENSRNOT00000011641	Zfhx4 Links NCBI RGD Ensembl Show fit	zinc finger homeobox 4
chr10_+_29029590 Show fit	2.41	ENSRNOT00000005132	Slu7 Links NCBI RGD Ensembl Show fit	SLU7 homolog, splicing factor
chr3_-_147865393 Show fit	2.36	ENSRNOT00000009852	Sox12 Links NCBI RGD Ensembl Show fit	SRY box 12
chr4_-_27331508 Show fit	2.20	ENSRNOT00000090751 ENSRNOT00000010118	Akap9 Links NCBI RGD Ensembl Show fit	A-kinase anchoring protein 9
chr14_-_23002011 Show fit	2.01	ENSRNOT00000002736	Ythdc1 Links NCBI RGD Ensembl Show fit	YTH domain containing 1
chrX_+_157374305 Show fit	2.01	ENSRNOT00000081973	Trex2 Links NCBI RGD Ensembl Show fit	three prime repair exonuclease 2
chr5_-_60559533 Show fit	2.00	ENSRNOT00000092899	Zbtb5 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 5
chr19_-_25345790 Show fit	1.99	ENSRNOT00000010050	Zswim4 Links NCBI RGD Ensembl Show fit	zinc finger, SWIM-type containing 4
chr9_+_42315682 Show fit	1.93	ENSRNOT00000071995	AABR07067388.1 Links NCBI RGD Ensembl Show fit
chr4_-_67520356 Show fit	1.90	ENSRNOT00000014604	Braf Links NCBI RGD Ensembl Show fit	B-Raf proto-oncogene, serine/threonine kinase
chr5_+_48374096 Show fit	1.90	ENSRNOT00000010172	Gabrr1 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor rho 1 subunit
chrX_+_10430847 Show fit	1.89	ENSRNOT00000047936	Rpl21 Links NCBI RGD Ensembl Show fit	ribosomal protein L21
chr2_+_257633425 Show fit	1.88	ENSRNOT00000071770	Zzz3 Links NCBI RGD Ensembl Show fit	zinc finger, ZZ-type containing 3
chr16_-_69280109 Show fit	1.88	ENSRNOT00000058595	AABR07026240.1 Links NCBI RGD Ensembl Show fit
chr4_-_115516296 Show fit	1.88	ENSRNOT00000019399	Paip2b Links NCBI RGD Ensembl Show fit	poly(A) binding protein interacting protein 2B
chr1_-_264706476 Show fit	1.86	ENSRNOT00000045446	AC121209.1 Links NCBI RGD Ensembl Show fit
chr9_+_94702129 Show fit	1.85	ENSRNOT00000080930	Neu2 Links NCBI RGD Ensembl Show fit	neuraminidase 2
chr13_+_90533365 Show fit	1.78	ENSRNOT00000082469	Dcaf8 Links NCBI RGD Ensembl Show fit	DDB1 and CUL4 associated factor 8
chr15_-_61876430 Show fit	1.73	ENSRNOT00000049690	AC123280.1 Links NCBI RGD Ensembl Show fit
chr16_+_53957858 Show fit	1.64	ENSRNOT00000013078	Frg1 Links NCBI RGD Ensembl Show fit	FSHD region gene 1
chr8_+_128087345 Show fit	1.59	ENSRNOT00000019777	Acvr2b Links NCBI RGD Ensembl Show fit	activin A receptor type 2B
chr6_-_50786967 Show fit	1.48	ENSRNOT00000009566	Cbll1 Links NCBI RGD Ensembl Show fit	Cbl proto-oncogene like 1
chr10_+_89645973 Show fit	1.43	ENSRNOT00000086892	Dhx8 Links NCBI RGD Ensembl Show fit	DEAH-box helicase 8
chr6_-_26486695 Show fit	1.41	ENSRNOT00000073236	Krtcap3 Links NCBI RGD Ensembl Show fit	keratinocyte associated protein 3
chr16_-_19583386 Show fit	1.21	ENSRNOT00000090131	Zfp617 Links NCBI RGD Ensembl Show fit	zinc finger protein 617
chr7_+_24534615 Show fit	1.15	ENSRNOT00000009124	Cry1 Links NCBI RGD Ensembl Show fit	cryptochrome circadian clock 1
chr4_+_168599331 Show fit	1.11	ENSRNOT00000086719	Crebl2 Links NCBI RGD Ensembl Show fit	cAMP responsive element binding protein-like 2
chr15_+_32894938 Show fit	1.04	ENSRNOT00000012837	Abhd4 Links NCBI RGD Ensembl Show fit	abhydrolase domain containing 4
chr10_+_89646195 Show fit	1.02	ENSRNOT00000048140	Dhx8 Links NCBI RGD Ensembl Show fit	DEAH-box helicase 8
chr7_-_120780108 Show fit	0.88	ENSRNOT00000018185	Ddx17 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 17
chr9_-_37144015 Show fit	0.87	ENSRNOT00000015638	Phf3 Links NCBI RGD Ensembl Show fit	PHD finger protein 3
chr9_-_71651512 Show fit	0.82	ENSRNOT00000032782	Plekhm3 Links NCBI RGD Ensembl Show fit	pleckstrin homology domain containing M3
chr9_-_61528882 Show fit	0.69	ENSRNOT00000015432	Ankrd44 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 44
chr13_-_97838228 Show fit	0.61	ENSRNOT00000003618	Tfb2m Links NCBI RGD Ensembl Show fit	transcription factor B2, mitochondrial
chr7_-_91538673 Show fit	0.59	ENSRNOT00000006209	Rad21 Links NCBI RGD Ensembl Show fit	RAD21 cohesin complex component
chr2_+_185590986 Show fit	0.56	ENSRNOT00000088807 ENSRNOT00000088188	Lrba Links NCBI RGD Ensembl Show fit	LPS responsive beige-like anchor protein
chr2_+_51672722 Show fit	0.56	ENSRNOT00000016485	Fgf10 Links NCBI RGD Ensembl Show fit	fibroblast growth factor 10
chr11_-_78861716 Show fit	0.28	ENSRNOT00000002634	Tprg1 Links NCBI RGD Ensembl Show fit	tumor protein p63 regulated 1
chr17_+_86408151 Show fit	0.17	ENSRNOT00000022734	Otud1 Links NCBI RGD Ensembl Show fit	OTU deubiquitinase 1
chr3_-_160038078 Show fit	0.16	ENSRNOT00000013445	Serinc3 Links NCBI RGD Ensembl Show fit	serine incorporator 3

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
8.9	26.8	GO:1904879	positive regulation of calcium ion transmembrane transport via high voltage-gated calcium channel(GO:1904879)
7.8	38.9	GO:0014878	response to electrical stimulus involved in regulation of muscle adaptation(GO:0014878)
7.1	21.4	GO:0010813	neuropeptide catabolic process(GO:0010813)
5.1	15.2	GO:0090249	cell motility involved in somitogenic axis elongation(GO:0090247) regulation of cell motility involved in somitogenic axis elongation(GO:0090249)
4.7	14.0	GO:0048014	Tie signaling pathway(GO:0048014)
4.4	17.4	GO:0042998	positive regulation of Golgi to plasma membrane protein transport(GO:0042998)
4.1	24.6	GO:0043553	negative regulation of phosphatidylinositol 3-kinase activity(GO:0043553)
3.0	21.3	GO:0045084	positive regulation of interleukin-12 biosynthetic process(GO:0045084)
3.0	12.1	GO:0010510	regulation of acetyl-CoA biosynthetic process from pyruvate(GO:0010510)
3.0	9.0	GO:0031583	phospholipase D-activating G-protein coupled receptor signaling pathway(GO:0031583)
2.9	8.8	GO:0001827	inner cell mass cell fate commitment(GO:0001827) inner cell mass cellular morphogenesis(GO:0001828)
2.9	14.3	GO:0042078	germ-line stem cell division(GO:0042078) male germ-line stem cell asymmetric division(GO:0048133) germline stem cell asymmetric division(GO:0098728)
2.7	8.2	GO:0006267	pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
2.7	42.5	GO:0038166	angiotensin-activated signaling pathway(GO:0038166)
2.6	46.1	GO:0032060	bleb assembly(GO:0032060)
2.5	9.8	GO:0043988	histone H3-S10 phosphorylation(GO:0043987) histone H3-S28 phosphorylation(GO:0043988) histone H2A phosphorylation(GO:1990164)
2.3	11.5	GO:0030205	dermatan sulfate metabolic process(GO:0030205)
2.3	18.3	GO:0019800	peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800)
2.3	6.8	GO:0051088	PMA-inducible membrane protein ectodomain proteolysis(GO:0051088)
2.2	8.8	GO:0071883	activation of MAPK activity by adrenergic receptor signaling pathway(GO:0071883)
2.1	10.3	GO:0060005	vestibular reflex(GO:0060005)
2.0	18.3	GO:1901223	negative regulation of NIK/NF-kappaB signaling(GO:1901223)
2.0	6.0	GO:0071387	cellular response to cortisol stimulus(GO:0071387)
1.8	26.5	GO:0035970	peptidyl-threonine dephosphorylation(GO:0035970)
1.7	8.6	GO:0045085	negative regulation of interleukin-2 biosynthetic process(GO:0045085)
1.6	4.8	GO:0035262	left ventricular cardiac muscle tissue morphogenesis(GO:0003220) cell proliferation involved in heart valve morphogenesis(GO:0003249) regulation of cell proliferation involved in heart valve morphogenesis(GO:0003250) gonad morphogenesis(GO:0035262) nephrogenic mesenchyme morphogenesis(GO:0072134)
1.5	7.7	GO:0010037	response to carbon dioxide(GO:0010037)
1.5	8.9	GO:0021759	globus pallidus development(GO:0021759)
1.5	34.0	GO:0002347	response to tumor cell(GO:0002347)
1.4	10.0	GO:0070317	negative regulation of G0 to G1 transition(GO:0070317)
1.4	5.7	GO:0045658	regulation of neutrophil differentiation(GO:0045658)
1.4	12.6	GO:2000774	positive regulation of cellular senescence(GO:2000774)
1.4	5.6	GO:0030576	Cajal body organization(GO:0030576)
1.3	8.8	GO:0034773	histone H4-K20 trimethylation(GO:0034773)
1.2	13.7	GO:0045916	negative regulation of complement activation(GO:0045916) negative regulation of protein activation cascade(GO:2000258)
1.2	23.6	GO:0021527	spinal cord association neuron differentiation(GO:0021527)
1.2	4.9	GO:1902263	apoptotic process involved in embryonic digit morphogenesis(GO:1902263)
1.2	7.4	GO:0007221	positive regulation of transcription of Notch receptor target(GO:0007221)
1.2	23.0	GO:0031581	hemidesmosome assembly(GO:0031581)
1.2	14.5	GO:1900746	regulation of vascular endothelial growth factor signaling pathway(GO:1900746)
1.2	9.4	GO:0098734	macromolecule depalmitoylation(GO:0098734)
1.1	5.7	GO:0090131	mesenchyme migration(GO:0090131)
1.1	3.3	GO:0001831	trophectodermal cellular morphogenesis(GO:0001831)
1.1	17.6	GO:0043517	positive regulation of DNA damage response, signal transduction by p53 class mediator(GO:0043517)
1.1	6.5	GO:0010360	negative regulation of anion channel activity(GO:0010360)
1.1	9.6	GO:0060136	embryonic process involved in female pregnancy(GO:0060136)
1.0	3.1	GO:0002071	glandular epithelial cell maturation(GO:0002071) positive regulation of type B pancreatic cell development(GO:2000078)
1.0	6.1	GO:0097490	trunk segmentation(GO:0035290) trunk neural crest cell migration(GO:0036484) ventral trunk neural crest cell migration(GO:0036486) sympathetic neuron projection extension(GO:0097490) sympathetic neuron projection guidance(GO:0097491)
1.0	4.0	GO:1902261	positive regulation of delayed rectifier potassium channel activity(GO:1902261)
0.9	16.7	GO:0042347	negative regulation of NF-kappaB import into nucleus(GO:0042347)
0.9	6.3	GO:0044341	sodium-dependent phosphate transport(GO:0044341)
0.9	2.6	GO:0036023	embryonic skeletal limb joint morphogenesis(GO:0036023)
0.6	4.4	GO:0060501	positive regulation of epithelial cell proliferation involved in lung morphogenesis(GO:0060501)
0.6	2.4	GO:0000389	mRNA 3'-splice site recognition(GO:0000389)
0.6	8.7	GO:0031167	rRNA methylation(GO:0031167)
0.6	0.6	GO:0071338	submandibular salivary gland formation(GO:0060661) positive regulation of hair follicle cell proliferation(GO:0071338)
0.5	22.8	GO:1901385	regulation of voltage-gated calcium channel activity(GO:1901385)
0.5	4.3	GO:0015886	heme transport(GO:0015886)
0.5	1.9	GO:2000301	negative regulation of synaptic vesicle exocytosis(GO:2000301)
0.5	1.8	GO:0051692	cellular oligosaccharide catabolic process(GO:0051692)
0.4	6.2	GO:0045792	negative regulation of cell size(GO:0045792)
0.4	8.7	GO:2000505	regulation of energy homeostasis(GO:2000505)
0.4	19.4	GO:0045907	positive regulation of vasoconstriction(GO:0045907)
0.4	3.4	GO:0032876	negative regulation of DNA endoreduplication(GO:0032876)
0.4	2.6	GO:0035735	intraciliary transport involved in cilium morphogenesis(GO:0035735)
0.4	6.3	GO:0044068	modulation by symbiont of host cellular process(GO:0044068)
0.4	7.0	GO:0060218	hematopoietic stem cell differentiation(GO:0060218)
0.4	2.9	GO:0043402	glucocorticoid mediated signaling pathway(GO:0043402)
0.4	3.6	GO:0070236	negative regulation of activation-induced cell death of T cells(GO:0070236)
0.3	16.1	GO:0045604	regulation of epidermal cell differentiation(GO:0045604)
0.3	3.1	GO:0060770	negative regulation of epithelial cell proliferation involved in prostate gland development(GO:0060770)
0.3	2.2	GO:0051661	maintenance of centrosome location(GO:0051661)
0.2	4.6	GO:0032793	positive regulation of CREB transcription factor activity(GO:0032793)
0.2	1.1	GO:2000847	DNA damage induced protein phosphorylation(GO:0006975) negative regulation of corticosteroid hormone secretion(GO:2000847) negative regulation of glucocorticoid secretion(GO:2000850)
0.2	1.6	GO:0060836	lymphatic endothelial cell differentiation(GO:0060836)
0.2	2.5	GO:0006337	nucleosome disassembly(GO:0006337)
0.2	2.9	GO:1901663	ubiquinone biosynthetic process(GO:0006744) quinone biosynthetic process(GO:1901663)
0.2	5.7	GO:0001953	negative regulation of cell-matrix adhesion(GO:0001953)
0.2	3.4	GO:0003417	growth plate cartilage development(GO:0003417)
0.2	3.6	GO:0055012	ventricular cardiac muscle cell differentiation(GO:0055012)
0.1	11.0	GO:0045576	mast cell activation(GO:0045576)
0.1	8.5	GO:0048663	neuron fate commitment(GO:0048663)
0.1	1.9	GO:0045947	negative regulation of translational initiation(GO:0045947)
0.1	2.7	GO:0071425	hematopoietic stem cell proliferation(GO:0071425)
0.1	7.6	GO:0072384	organelle transport along microtubule(GO:0072384)
0.1	7.0	GO:0031338	regulation of vesicle fusion(GO:0031338)
0.1	21.5	GO:0010506	regulation of autophagy(GO:0010506)
0.1	2.0	GO:0006376	mRNA splice site selection(GO:0006376)
0.1	28.6	GO:0051260	protein homooligomerization(GO:0051260)
0.1	4.0	GO:0006900	membrane budding(GO:0006900)
0.1	3.3	GO:0080171	lysosome organization(GO:0007040) lytic vacuole organization(GO:0080171)
0.1	0.6	GO:0045876	positive regulation of sister chromatid cohesion(GO:0045876)
0.1	9.5	GO:0006275	regulation of DNA replication(GO:0006275)
0.1	0.7	GO:0033148	positive regulation of intracellular estrogen receptor signaling pathway(GO:0033148)
0.0	7.7	GO:0006479	protein methylation(GO:0006479) protein alkylation(GO:0008213)
0.0	0.2	GO:0009597	detection of virus(GO:0009597)
0.0	3.4	GO:0006334	nucleosome assembly(GO:0006334)
0.0	1.1	GO:0046326	positive regulation of glucose import(GO:0046326)
0.0	2.4	GO:0065004	protein-DNA complex assembly(GO:0065004)
0.0	3.1	GO:0030010	establishment of cell polarity(GO:0030010)
0.0	1.9	GO:1902476	chloride transmembrane transport(GO:1902476)
0.0	10.7	GO:0000278	mitotic cell cycle(GO:0000278)
0.0	6.9	GO:0007283	spermatogenesis(GO:0007283)
0.0	0.2	GO:0070536	protein K63-linked deubiquitination(GO:0070536)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
3.5	14.0	GO:0036398	TCR signalosome(GO:0036398)
3.3	16.7	GO:0043293	apoptosome(GO:0043293)
2.7	8.2	GO:0005656	nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
2.3	11.4	GO:0060053	neurofilament cytoskeleton(GO:0060053)
2.2	26.8	GO:1990454	L-type voltage-gated calcium channel complex(GO:1990454)
1.9	9.6	GO:0035976	AP1 complex(GO:0035976)
1.9	11.6	GO:0005608	laminin-3 complex(GO:0005608)
1.8	58.3	GO:0031430	M band(GO:0031430)
1.6	21.4	GO:0032593	insulin-responsive compartment(GO:0032593)
1.5	9.0	GO:0048237	Weibel-Palade body(GO:0033093) rough endoplasmic reticulum lumen(GO:0048237)
1.3	4.0	GO:0014701	junctional sarcoplasmic reticulum membrane(GO:0014701)
0.9	6.8	GO:0097197	tetraspanin-enriched microdomain(GO:0097197)
0.8	4.8	GO:0032444	activin responsive factor complex(GO:0032444)
0.8	3.1	GO:0097427	microtubule bundle(GO:0097427)
0.8	27.9	GO:0043034	costamere(GO:0043034)
0.8	6.2	GO:0031931	TORC1 complex(GO:0031931)
0.7	4.9	GO:0097136	Bcl-2 family protein complex(GO:0097136)
0.6	15.2	GO:0000159	protein phosphatase type 2A complex(GO:0000159)
0.5	2.2	GO:0044307	dendritic branch(GO:0044307)
0.5	5.7	GO:0032982	myosin filament(GO:0032982)
0.5	3.3	GO:0005827	polar microtubule(GO:0005827)
0.5	36.6	GO:0005758	mitochondrial intermembrane space(GO:0005758)
0.5	3.2	GO:0090571	RNA polymerase II transcription repressor complex(GO:0090571)
0.3	2.7	GO:0031466	Cul5-RING ubiquitin ligase complex(GO:0031466)
0.3	14.0	GO:0009925	basal plasma membrane(GO:0009925)
0.3	2.5	GO:0071598	neuronal ribonucleoprotein granule(GO:0071598)
0.2	2.6	GO:0002177	manchette(GO:0002177)
0.2	16.0	GO:0000118	histone deacetylase complex(GO:0000118)
0.2	27.0	GO:0031674	I band(GO:0031674)
0.2	14.9	GO:0031463	Cul3-RING ubiquitin ligase complex(GO:0031463)
0.2	2.5	GO:0071564	npBAF complex(GO:0071564)
0.2	3.2	GO:0005686	U2 snRNP(GO:0005686)
0.1	8.8	GO:0030864	cortical actin cytoskeleton(GO:0030864)
0.1	41.2	GO:0005667	transcription factor complex(GO:0005667)
0.1	5.6	GO:0015030	Cajal body(GO:0015030)
0.1	1.9	GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex(GO:0005671)
0.1	1.9	GO:1902711	GABA-A receptor complex(GO:1902711)
0.1	26.3	GO:0016607	nuclear speck(GO:0016607)
0.1	0.6	GO:0000798	nuclear cohesin complex(GO:0000798)
0.1	6.3	GO:0031526	brush border membrane(GO:0031526)
0.1	22.3	GO:0009897	external side of plasma membrane(GO:0009897)
0.1	9.8	GO:0005840	ribosome(GO:0005840)
0.1	7.7	GO:0000922	spindle pole(GO:0000922)
0.1	6.2	GO:0022625	cytosolic large ribosomal subunit(GO:0022625)
0.1	4.0	GO:0032580	Golgi cisterna membrane(GO:0032580)
0.1	9.5	GO:0005802	trans-Golgi network(GO:0005802)
0.1	29.0	GO:0009986	cell surface(GO:0009986)
0.0	2.0	GO:0031519	PcG protein complex(GO:0031519)
0.0	4.3	GO:0055037	recycling endosome(GO:0055037)
0.0	12.8	GO:0005759	mitochondrial matrix(GO:0005759)
0.0	2.4	GO:0071013	catalytic step 2 spliceosome(GO:0071013)
0.0	2.6	GO:0005604	basement membrane(GO:0005604)
0.0	59.7	GO:0005654	nucleoplasm(GO:0005654)
0.0	4.3	GO:0010008	endosome membrane(GO:0010008)
0.0	6.9	GO:0005768	endosome(GO:0005768)
0.0	3.1	GO:0000790	nuclear chromatin(GO:0000790)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
8.8	43.8	GO:0043120	tumor necrosis factor binding(GO:0043120)
7.7	23.0	GO:0008330	protein tyrosine/threonine phosphatase activity(GO:0008330)
4.8	14.5	GO:0001087	transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
4.5	26.8	GO:0086056	voltage-gated calcium channel activity involved in AV node cell action potential(GO:0086056)
4.2	58.2	GO:0031432	titin binding(GO:0031432)
3.8	11.5	GO:0047757	chondroitin-glucuronate 5-epimerase activity(GO:0047757)
3.1	21.4	GO:0001595	angiotensin receptor activity(GO:0001595)
3.0	12.1	GO:0004740	pyruvate dehydrogenase (acetyl-transferring) kinase activity(GO:0004740)
3.0	9.0	GO:0031708	endothelin B receptor binding(GO:0031708)
2.2	8.8	GO:0004691	cAMP-dependent protein kinase activity(GO:0004691)
2.2	17.4	GO:0071253	connexin binding(GO:0071253)
2.2	8.7	GO:0016433	rRNA (adenine) methyltransferase activity(GO:0016433)
2.1	27.9	GO:0097493	structural molecule activity conferring elasticity(GO:0097493)
1.9	42.5	GO:0070006	metalloaminopeptidase activity(GO:0070006)
1.9	7.7	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
1.4	8.6	GO:0042289	MHC class II protein binding(GO:0042289)
1.3	12.1	GO:0004716	receptor signaling protein tyrosine kinase activity(GO:0004716)
1.3	9.4	GO:0008474	palmitoyl-(protein) hydrolase activity(GO:0008474) palmitoyl hydrolase activity(GO:0098599)
1.3	5.1	GO:0055100	adiponectin binding(GO:0055100)
1.3	6.3	GO:0015321	sodium-dependent phosphate transmembrane transporter activity(GO:0015321)
1.1	3.3	GO:0031208	POZ domain binding(GO:0031208)
1.1	6.5	GO:0047696	beta-adrenergic receptor kinase activity(GO:0047696)
1.1	19.4	GO:0005523	tropomyosin binding(GO:0005523)
1.0	13.2	GO:0032041	histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041)
0.9	5.5	GO:0005499	vitamin D binding(GO:0005499)
0.8	2.4	GO:0000386	second spliceosomal transesterification activity(GO:0000386)
0.8	8.7	GO:0004887	thyroid hormone receptor activity(GO:0004887)
0.7	8.9	GO:0044213	intronic transcription regulatory region sequence-specific DNA binding(GO:0001161) intronic transcription regulatory region DNA binding(GO:0044213)
0.6	3.6	GO:0004886	9-cis retinoic acid receptor activity(GO:0004886)
0.6	4.8	GO:0043199	sulfate binding(GO:0043199)
0.6	8.2	GO:0003688	DNA replication origin binding(GO:0003688)
0.5	21.3	GO:0005164	tumor necrosis factor receptor binding(GO:0005164)
0.5	11.4	GO:0051010	microtubule plus-end binding(GO:0051010)
0.5	3.6	GO:0043426	MRF binding(GO:0043426)
0.5	11.3	GO:0008327	methyl-CpG binding(GO:0008327)
0.5	2.9	GO:0043423	3-phosphoinositide-dependent protein kinase binding(GO:0043423)
0.5	4.3	GO:0015232	heme transporter activity(GO:0015232)
0.5	6.1	GO:0045499	chemorepellent activity(GO:0045499)
0.5	1.8	GO:0052796	exo-alpha-(2->3)-sialidase activity(GO:0052794) exo-alpha-(2->6)-sialidase activity(GO:0052795) exo-alpha-(2->8)-sialidase activity(GO:0052796)
0.4	4.0	GO:0043495	protein anchor(GO:0043495)
0.4	5.7	GO:0030215	semaphorin receptor binding(GO:0030215)
0.4	20.6	GO:0043548	phosphatidylinositol 3-kinase binding(GO:0043548)
0.4	7.6	GO:0031434	mitogen-activated protein kinase kinase binding(GO:0031434)
0.4	18.3	GO:0050840	extracellular matrix binding(GO:0050840)
0.4	7.7	GO:0015106	bicarbonate transmembrane transporter activity(GO:0015106)
0.3	39.1	GO:0005178	integrin binding(GO:0005178)
0.3	3.1	GO:0050321	tau-protein kinase activity(GO:0050321)
0.3	8.3	GO:1990841	promoter-specific chromatin binding(GO:1990841)
0.3	2.0	GO:1990247	N6-methyladenosine-containing RNA binding(GO:1990247)
0.2	1.6	GO:0034711	inhibin binding(GO:0034711)
0.2	2.0	GO:0008296	3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.2	6.3	GO:0051019	mitogen-activated protein kinase binding(GO:0051019)
0.1	4.4	GO:0050681	androgen receptor binding(GO:0050681)
0.1	3.4	GO:0070577	lysine-acetylated histone binding(GO:0070577)
0.1	2.5	GO:0016922	ligand-dependent nuclear receptor binding(GO:0016922)
0.1	7.6	GO:0019894	kinesin binding(GO:0019894)
0.1	3.1	GO:0030275	LRR domain binding(GO:0030275)
0.1	1.1	GO:0009881	photoreceptor activity(GO:0009881)
0.1	15.2	GO:0030674	protein binding, bridging(GO:0030674)
0.1	1.9	GO:0000900	translation repressor activity, nucleic acid binding(GO:0000900)
0.1	15.2	GO:0017124	SH3 domain binding(GO:0017124)
0.1	0.6	GO:0005111	type 2 fibroblast growth factor receptor binding(GO:0005111)
0.1	2.2	GO:0034237	protein kinase A regulatory subunit binding(GO:0034237)
0.1	10.0	GO:0001158	enhancer sequence-specific DNA binding(GO:0001158)
0.1	31.9	GO:0003712	transcription cofactor activity(GO:0003712)
0.1	8.8	GO:0000975	regulatory region DNA binding(GO:0000975) transcription regulatory region DNA binding(GO:0044212)
0.1	2.7	GO:0031624	ubiquitin conjugating enzyme binding(GO:0031624)
0.1	1.9	GO:0004890	GABA-A receptor activity(GO:0004890)
0.1	22.8	GO:0031625	ubiquitin protein ligase binding(GO:0031625)
0.1	2.9	GO:0043531	ADP binding(GO:0043531)
0.1	3.6	GO:0030145	manganese ion binding(GO:0030145)
0.1	7.5	GO:0004386	helicase activity(GO:0004386)
0.1	9.8	GO:0000287	magnesium ion binding(GO:0000287)
0.0	7.0	GO:0017137	Rab GTPase binding(GO:0017137)
0.0	12.1	GO:0004842	ubiquitin-protein transferase activity(GO:0004842)
0.0	28.2	GO:0001071	nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0	6.2	GO:0003735	structural constituent of ribosome(GO:0003735)
0.0	7.9	GO:0004674	protein serine/threonine kinase activity(GO:0004674)
0.0	10.4	GO:0003677	DNA binding(GO:0003677)
0.0	1.6	GO:0051015	actin filament binding(GO:0051015)
0.0	0.2	GO:0022889	L-serine transmembrane transporter activity(GO:0015194) serine transmembrane transporter activity(GO:0022889)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.0	27.5	PID TCR JNK PATHWAY	JNK signaling in the CD4+ TCR pathway
0.7	11.6	PID INTEGRIN4 PATHWAY	Alpha6 beta4 integrin-ligand interactions
0.6	19.5	PID INSULIN GLUCOSE PATHWAY	Insulin-mediated glucose transport
0.6	24.3	ST ERK1 ERK2 MAPK PATHWAY	ERK1/ERK2 MAPK Pathway
0.6	33.3	PID IL6 7 PATHWAY	IL6-mediated signaling events
0.5	9.8	PID LPA4 PATHWAY	LPA4-mediated signaling events
0.5	14.3	PID IL12 STAT4 PATHWAY	IL12 signaling mediated by STAT4
0.4	10.0	PID PI3KCI AKT PATHWAY	Class I PI3K signaling events mediated by Akt
0.4	18.3	NABA PROTEOGLYCANS	Genes encoding proteoglycans
0.4	8.8	PID THROMBIN PAR1 PATHWAY	PAR1-mediated thrombin signaling events
0.4	4.9	SA PROGRAMMED CELL DEATH	Programmed cell death, or apoptosis, eliminates damaged or unneeded cells.
0.4	23.3	PID AR PATHWAY	Coregulation of Androgen receptor activity
0.4	19.4	PID AR TF PATHWAY	Regulation of Androgen receptor activity
0.4	25.7	PID NOTCH PATHWAY	Notch signaling pathway
0.3	4.8	PID ALK2 PATHWAY	ALK2 signaling events
0.3	16.6	PID E2F PATHWAY	E2F transcription factor network
0.2	10.0	PID ANGIOPOIETIN RECEPTOR PATHWAY	Angiopoietin receptor Tie2-mediated signaling
0.2	9.0	PID ENDOTHELIN PATHWAY	Endothelins
0.2	9.0	PID LKB1 PATHWAY	LKB1 signaling events
0.2	58.4	NABA SECRETED FACTORS	Genes encoding secreted soluble factors
0.2	5.7	SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES	Genes related to regulation of the actin cytoskeleton
0.1	6.5	PID CXCR4 PATHWAY	CXCR4-mediated signaling events
0.1	1.6	PID ALK1 PATHWAY	ALK1 signaling events
0.1	2.9	PID FOXO PATHWAY	FoxO family signaling
0.1	5.4	PID ERA GENOMIC PATHWAY	Validated nuclear estrogen receptor alpha network
0.1	3.3	PID AURORA B PATHWAY	Aurora B signaling
0.1	2.6	NABA BASEMENT MEMBRANES	Genes encoding structural components of basement membranes
0.1	3.0	PID PLK1 PATHWAY	PLK1 signaling events
0.0	1.5	PID AJDISS 2PATHWAY	Posttranslational regulation of adherens junction stability and dissassembly
0.0	5.5	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
7.1	21.4	REACTOME ENDOSOMAL VACUOLAR PATHWAY	Genes involved in Endosomal/Vacuolar pathway
2.8	34.0	REACTOME THE NLRP3 INFLAMMASOME	Genes involved in The NLRP3 inflammasome
1.6	23.0	REACTOME ERKS ARE INACTIVATED	Genes involved in ERKs are inactivated
1.0	27.5	REACTOME GENERATION OF SECOND MESSENGER MOLECULES	Genes involved in Generation of second messenger molecules
0.9	9.8	REACTOME ERK MAPK TARGETS	Genes involved in ERK/MAPK targets
0.9	26.8	REACTOME INHIBITION OF INSULIN SECRETION BY ADRENALINE NORADRENALINE	Genes involved in Inhibition of Insulin Secretion by Adrenaline/Noradrenaline
0.8	12.1	REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX	Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex
0.8	6.8	REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR	Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor
0.7	8.2	REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION	Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.6	7.4	REACTOME NOTCH HLH TRANSCRIPTION PATHWAY	Genes involved in Notch-HLH transcription pathway
0.6	13.1	REACTOME SIGNALING BY HIPPO	Genes involved in Signaling by Hippo
0.6	14.4	REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION	Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
0.5	11.2	REACTOME TIE2 SIGNALING	Genes involved in Tie2 Signaling
0.5	14.5	REACTOME MYOGENESIS	Genes involved in Myogenesis
0.4	6.2	REACTOME AKT PHOSPHORYLATES TARGETS IN THE CYTOSOL	Genes involved in AKT phosphorylates targets in the cytosol
0.4	1.9	REACTOME SPRY REGULATION OF FGF SIGNALING	Genes involved in Spry regulation of FGF signaling
0.3	13.2	REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION	Genes involved in NOTCH1 Intracellular Domain Regulates Transcription
0.3	5.7	REACTOME OTHER SEMAPHORIN INTERACTIONS	Genes involved in Other semaphorin interactions
0.3	5.7	REACTOME PIP3 ACTIVATES AKT SIGNALING	Genes involved in PIP3 activates AKT signaling
0.3	4.9	REACTOME ACTIVATION OF BH3 ONLY PROTEINS	Genes involved in Activation of BH3-only proteins
0.2	28.2	REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION	Genes involved in Factors involved in megakaryocyte development and platelet production
0.2	3.3	REACTOME ACTIVATION OF CHAPERONES BY ATF6 ALPHA	Genes involved in Activation of Chaperones by ATF6-alpha
0.2	5.7	REACTOME SMOOTH MUSCLE CONTRACTION	Genes involved in Smooth Muscle Contraction
0.2	3.2	REACTOME G0 AND EARLY G1	Genes involved in G0 and Early G1
0.2	3.1	REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1	Genes involved in Regulation of AMPK activity via LKB1
0.2	41.0	REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION	Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.2	12.3	REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY	Genes involved in Nuclear Receptor transcription pathway
0.2	2.2	REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF CAMKII	Genes involved in CREB phosphorylation through the activation of CaMKII
0.2	8.4	REACTOME SIGNALING BY EGFR IN CANCER	Genes involved in Signaling by EGFR in Cancer
0.2	8.4	REACTOME NRAGE SIGNALS DEATH THROUGH JNK	Genes involved in NRAGE signals death through JNK
0.1	11.6	REACTOME CELL JUNCTION ORGANIZATION	Genes involved in Cell junction organization
0.1	1.6	REACTOME SIGNALING BY NODAL	Genes involved in Signaling by NODAL
0.1	4.0	REACTOME MEIOTIC SYNAPSIS	Genes involved in Meiotic Synapsis
0.1	1.9	REACTOME LIGAND GATED ION CHANNEL TRANSPORT	Genes involved in Ligand-gated ion channel transport
0.1	6.2	REACTOME PEPTIDE CHAIN ELONGATION	Genes involved in Peptide chain elongation
0.1	9.0	REACTOME G ALPHA Q SIGNALLING EVENTS	Genes involved in G alpha (q) signalling events
0.1	3.6	REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES	Genes involved in Antiviral mechanism by IFN-stimulated genes
0.0	1.8	REACTOME GLYCOSPHINGOLIPID METABOLISM	Genes involved in Glycosphingolipid metabolism
0.0	0.6	REACTOME FGFR1 LIGAND BINDING AND ACTIVATION	Genes involved in FGFR1 ligand binding and activation