GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Prdm1 Links NCBI RGD Ensembl	ENSRNOG00000000323	PR/SET domain 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Prdm1	rn6_v1_chr20_-_49486550_49486552	0.55	1.1e-26	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_-_215660492 Show fit	37.04	ENSRNOT00000079442	AC132720.1 Links NCBI RGD Ensembl Show fit
chr5_-_58198782 Show fit	34.86	ENSRNOT00000023951	Ccl21 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 21
chr10_-_5251809 Show fit	33.83	ENSRNOT00000085479	Ciita Links NCBI RGD Ensembl Show fit	class II, major histocompatibility complex, transactivator
chr1_-_237910012 Show fit	26.81	ENSRNOT00000023664	Anxa1 Links NCBI RGD Ensembl Show fit	annexin A1
chr4_+_98337367 Show fit	21.89	ENSRNOT00000042165	AABR07060872.1 Links NCBI RGD Ensembl Show fit
chr8_+_49713190 Show fit	21.29	ENSRNOT00000022074	Fxyd2 Links NCBI RGD Ensembl Show fit	FXYD domain-containing ion transport regulator 2
chr20_-_1878126 Show fit	21.16	ENSRNOT00000000995	Ubd Links NCBI RGD Ensembl Show fit	ubiquitin D
chr13_-_109849632 Show fit	20.76	ENSRNOT00000005085	Atf3 Links NCBI RGD Ensembl Show fit	activating transcription factor 3
chr13_+_48575091 Show fit	20.69	ENSRNOT00000009838	Pm20d1 Links NCBI RGD Ensembl Show fit	peptidase M20 domain containing 1
chr2_+_209097927 Show fit	17.23	ENSRNOT00000023807	Dennd2d Links NCBI RGD Ensembl Show fit	DENN domain containing 2D
chr7_+_124460358 Show fit	16.75	ENSRNOT00000014089	Tspo Links NCBI RGD Ensembl Show fit	translocator protein
chr4_+_90990088 Show fit	16.66	ENSRNOT00000030320	Mmrn1 Links NCBI RGD Ensembl Show fit	multimerin 1
chr6_-_24676524 Show fit	15.38	ENSRNOT00000047853	Capn13 Links NCBI RGD Ensembl Show fit	calpain 13
chr3_+_6430201 Show fit	15.08	ENSRNOT00000086352	Col5a1 Links NCBI RGD Ensembl Show fit	collagen type V alpha 1 chain
chr2_-_238468435 Show fit	14.92	ENSRNOT00000055537	LOC102556447 Links NCBI RGD Ensembl Show fit	rho guanine nucleotide exchange factor 38-like
chr3_-_160738927 Show fit	14.71	ENSRNOT00000043470	Slpil2 Links NCBI RGD Ensembl Show fit	antileukoproteinase-like 2
chr13_+_74410010 Show fit	13.93	ENSRNOT00000079152	Angptl1 Links NCBI RGD Ensembl Show fit	angiopoietin-like 1
chr3_+_16413080 Show fit	13.64	ENSRNOT00000040386	LOC100912707 Links NCBI RGD Ensembl Show fit	Ig kappa chain V19-17-like
chr10_-_87067456 Show fit	13.60	ENSRNOT00000014163	Ccr7 Links NCBI RGD Ensembl Show fit	C-C motif chemokine receptor 7
chr15_-_51855325 Show fit	13.38	ENSRNOT00000011663	Pdlim2 Links NCBI RGD Ensembl Show fit	PDZ and LIM domain 2
chr17_-_8429338 Show fit	13.19	ENSRNOT00000016390	Tgfbi Links NCBI RGD Ensembl Show fit	transforming growth factor, beta induced
chr11_-_37914983 Show fit	12.62	ENSRNOT00000039876	Mx1 Links NCBI RGD Ensembl Show fit	myxovirus (influenza virus) resistance 1
chr5_-_58183017 Show fit	12.48	ENSRNOT00000020982	Ccl19 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 19
chr3_+_158997834 Show fit	12.33	ENSRNOT00000000211	LOC108348048 Links NCBI RGD Ensembl Show fit	von Willebrand factor A domain-containing protein 5A
chr4_-_103024841 Show fit	12.17	ENSRNOT00000090283	AABR07061036.1 Links NCBI RGD Ensembl Show fit
chrX_+_104684676 Show fit	12.08	ENSRNOT00000083229	Tnmd Links NCBI RGD Ensembl Show fit	tenomodulin
chr3_-_7498555 Show fit	12.00	ENSRNOT00000017725	Barhl1 Links NCBI RGD Ensembl Show fit	BarH-like homeobox 1
chr7_-_117300662 Show fit	11.97	ENSRNOT00000006376	Parp10 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 10
chr1_-_166677026 Show fit	11.88	ENSRNOT00000026644 ENSRNOT00000076714	Art2b Links NCBI RGD Ensembl Show fit	ADP-ribosyltransferase 2b
chr3_-_17081510 Show fit	11.83	ENSRNOT00000063862	AABR07051562.1 Links NCBI RGD Ensembl Show fit
chr6_-_143195143 Show fit	11.73	ENSRNOT00000081337	AABR07065837.1 Links NCBI RGD Ensembl Show fit
chr16_-_85306366 Show fit	11.70	ENSRNOT00000089650	Tnfsf13b Links NCBI RGD Ensembl Show fit	tumor necrosis factor superfamily member 13b
chr10_-_57064600 Show fit	11.70	ENSRNOT00000032926	Cxcl16 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 16
chr2_-_149564113 Show fit	11.55	ENSRNOT00000018628	Igsf10 Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily, member 10
chr14_+_6058544 Show fit	11.25	ENSRNOT00000061267	Abcg3l3 Links NCBI RGD Ensembl Show fit	ATP-binding cassette, subfamily G (WHITE), member 3-like 3
chr7_+_118685022 Show fit	11.13	ENSRNOT00000089135	Apol3 Links NCBI RGD Ensembl Show fit	apolipoprotein L, 3
chr1_-_101236065 Show fit	11.06	ENSRNOT00000066834	Cd37 Links NCBI RGD Ensembl Show fit	CD37 molecule
chr1_-_88193346 Show fit	10.91	ENSRNOT00000078600	LOC103690068 Links NCBI RGD Ensembl Show fit	immortalization up-regulated protein-like
chr1_+_226634009 Show fit	10.90	ENSRNOT00000028094	Cyb561a3 Links NCBI RGD Ensembl Show fit	cytochrome b561 family, member A3
chr19_-_55367353 Show fit	10.86	ENSRNOT00000091139	Piezo1 Links NCBI RGD Ensembl Show fit	piezo-type mechanosensitive ion channel component 1
chr3_-_171286413 Show fit	10.70	ENSRNOT00000008365 ENSRNOT00000081036	Zbp1 Links NCBI RGD Ensembl Show fit	Z-DNA binding protein 1
chr5_+_173288447 Show fit	10.69	ENSRNOT00000091205 ENSRNOT00000067252	Mxra8 Links NCBI RGD Ensembl Show fit	matrix remodeling associated 8
chr4_+_149261044 Show fit	10.63	ENSRNOT00000066670	Cxcl12 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 12
chr2_+_248398917 Show fit	10.60	ENSRNOT00000045855	Gbp1 Links NCBI RGD Ensembl Show fit	guanylate binding protein 1
chr8_+_42443442 Show fit	10.56	ENSRNOT00000015986	Vwa5a Links NCBI RGD Ensembl Show fit	von Willebrand factor A domain containing 5A
chr7_+_107695227 Show fit	10.31	ENSRNOT00000009673	Wisp1 Links NCBI RGD Ensembl Show fit	WNT1 inducible signaling pathway protein 1
chr20_+_3995544 Show fit	10.23	ENSRNOT00000000527	Tap2 Links NCBI RGD Ensembl Show fit	transporter 2, ATP binding cassette subfamily B member
chr1_-_198577226 Show fit	10.20	ENSRNOT00000055013	Spn Links NCBI RGD Ensembl Show fit	sialophorin
chr19_+_54060622 Show fit	10.10	ENSRNOT00000023607	Gse1 Links NCBI RGD Ensembl Show fit	Gse1 coiled-coil protein
chr8_-_128026841 Show fit	9.93	ENSRNOT00000018341	Myd88 Links NCBI RGD Ensembl Show fit	myeloid differentiation primary response 88
chr5_-_58950373 Show fit	9.76	ENSRNOT00000060442	Cd72 Links NCBI RGD Ensembl Show fit	Cd72 molecule
chr13_-_89606326 Show fit	9.76	ENSRNOT00000029179	Fcer1g Links NCBI RGD Ensembl Show fit	Fc fragment of IgE receptor Ig
chrX_-_62690806 Show fit	9.74	ENSRNOT00000018147	Pola1 Links NCBI RGD Ensembl Show fit	DNA polymerase alpha 1, catalytic subunit
chr9_-_76768770 Show fit	9.64	ENSRNOT00000087779 ENSRNOT00000057849	Ikzf2 Links NCBI RGD Ensembl Show fit	IKAROS family zinc finger 2
chr9_+_68414339 Show fit	9.61	ENSRNOT00000040778	Pard3b Links NCBI RGD Ensembl Show fit	par-3 family cell polarity regulator beta
chr1_-_217844957 Show fit	9.59	ENSRNOT00000090653	Ano1 Links NCBI RGD Ensembl Show fit	anoctamin 1
chr20_+_3990820 Show fit	9.30	ENSRNOT00000000528	Psmb8 Links NCBI RGD Ensembl Show fit	proteasome subunit beta 8
chr16_-_48692476 Show fit	9.28	ENSRNOT00000013118	Irf2 Links NCBI RGD Ensembl Show fit	interferon regulatory factor 2
chr2_+_243656579 Show fit	9.25	ENSRNOT00000036993	Adh1 Links NCBI RGD Ensembl Show fit	alcohol dehydrogenase 1 (class I)
chr14_-_6541171 Show fit	9.09	ENSRNOT00000042532 ENSRNOT00000087758	Abcg3l1 Links NCBI RGD Ensembl Show fit	ATP-binding cassette, subfamily G (WHITE), member 3-like 1
chr8_+_14060394 Show fit	9.03	ENSRNOT00000014827	Smco4 Links NCBI RGD Ensembl Show fit	single-pass membrane protein with coiled-coil domains 4
chr8_+_99880073 Show fit	9.02	ENSRNOT00000010765	Plscr4 Links NCBI RGD Ensembl Show fit	phospholipid scramblase 4
chr17_-_32661865 Show fit	8.97	ENSRNOT00000022194	Serpinb9 Links NCBI RGD Ensembl Show fit	serpin family B member 9
chr9_+_98924134 Show fit	8.97	ENSRNOT00000027597	Twist2 Links NCBI RGD Ensembl Show fit	twist family bHLH transcription factor 2
chr4_-_81968832 Show fit	8.90	ENSRNOT00000016608	Skap2 Links NCBI RGD Ensembl Show fit	src kinase associated phosphoprotein 2
chr15_+_42489377 Show fit	8.82	ENSRNOT00000064306	Pbk Links NCBI RGD Ensembl Show fit	PDZ binding kinase
chrX_-_34794589 Show fit	8.45	ENSRNOT00000008703	Rai2 Links NCBI RGD Ensembl Show fit	retinoic acid induced 2
chr4_-_103569159 Show fit	8.28	ENSRNOT00000084036	AABR07061072.1 Links NCBI RGD Ensembl Show fit
chr15_+_34256071 Show fit	8.25	ENSRNOT00000025887	Psme1 Links NCBI RGD Ensembl Show fit	proteasome activator subunit 1
chr17_-_44840131 Show fit	8.23	ENSRNOT00000083417	Hist1h3b Links NCBI RGD Ensembl Show fit	histone cluster 1, H3b
chr3_+_22964230 Show fit	8.07	ENSRNOT00000041813	LOC100362149 Links NCBI RGD Ensembl Show fit	ribosomal protein S20-like
chr1_+_41323194 Show fit	7.99	ENSRNOT00000026350	Esr1 Links NCBI RGD Ensembl Show fit	estrogen receptor 1
chr2_-_235052464 Show fit	7.97	ENSRNOT00000093512	LOC103691699 Links NCBI RGD Ensembl Show fit	uncharacterized LOC103691699
chr12_+_2180150 Show fit	7.96	ENSRNOT00000001322	Stxbp2 Links NCBI RGD Ensembl Show fit	syntaxin binding protein 2
chr8_-_116469915 Show fit	7.95	ENSRNOT00000024193	Sema3f Links NCBI RGD Ensembl Show fit	semaphorin 3F
chr20_+_12225202 Show fit	7.84	ENSRNOT00000045315	Col18a1 Links NCBI RGD Ensembl Show fit	collagen type XVIII alpha 1 chain
chrX_+_120624518 Show fit	7.81	ENSRNOT00000007967	Slc6a14 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 14
chr9_-_1012450 Show fit	7.81	ENSRNOT00000051449	LOC100359951 Links NCBI RGD Ensembl Show fit	ribosomal protein S20-like
chr13_+_51795867 Show fit	7.66	ENSRNOT00000006747	Ube2t Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2T
chr5_+_161889342 Show fit	7.66	ENSRNOT00000040481	LOC100362684 Links NCBI RGD Ensembl Show fit	ribosomal protein S20-like
chr16_-_40555576 Show fit	7.47	ENSRNOT00000015529	Vegfc Links NCBI RGD Ensembl Show fit	vascular endothelial growth factor C
chr18_+_79773608 Show fit	7.45	ENSRNOT00000088484	Zfp516 Links NCBI RGD Ensembl Show fit	zinc finger protein 516
chr5_-_59113773 Show fit	7.43	ENSRNOT00000083129	AC121204.3 Links NCBI RGD Ensembl Show fit
chr1_-_101131012 Show fit	7.36	ENSRNOT00000082283 ENSRNOT00000093498 ENSRNOT00000093559	Flt3lg Links NCBI RGD Ensembl Show fit Rpl13a Links NCBI RGD Ensembl Show fit	fms-related tyrosine kinase 3 ligand ribosomal protein L13A
chr20_+_248410 Show fit	7.35	ENSRNOT00000049573	Tmlhe Links NCBI RGD Ensembl Show fit	trimethyllysine hydroxylase, epsilon
chr20_-_3978845 Show fit	7.33	ENSRNOT00000000532	Psmb9 Links NCBI RGD Ensembl Show fit	proteasome subunit beta 9
chr5_+_157423213 Show fit	7.33	ENSRNOT00000023431	Tmco4 Links NCBI RGD Ensembl Show fit	transmembrane and coiled-coil domains 4
chr8_+_62341613 Show fit	7.27	ENSRNOT00000066923	Scamp2 Links NCBI RGD Ensembl Show fit	secretory carrier membrane protein 2
chr20_+_8484311 Show fit	7.23	ENSRNOT00000050041	LOC100364116 Links NCBI RGD Ensembl Show fit	ribosomal protein S20-like
chr7_+_59349745 Show fit	7.15	ENSRNOT00000085334	Ptprb Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, B
chr8_-_107952530 Show fit	7.14	ENSRNOT00000052043	Cldn18 Links NCBI RGD Ensembl Show fit	claudin 18
chr2_-_52282548 Show fit	6.96	ENSRNOT00000033627	Nnt Links NCBI RGD Ensembl Show fit	nicotinamide nucleotide transhydrogenase
chr17_+_69468427 Show fit	6.93	ENSRNOT00000058413	RGD1564865 Links NCBI RGD Ensembl Show fit	similar to 20-alpha-hydroxysteroid dehydrogenase
chr4_+_67165883 Show fit	6.80	ENSRNOT00000012280	Rab19 Links NCBI RGD Ensembl Show fit	RAB19, member RAS oncogene family
chr11_+_60336061 Show fit	6.78	ENSRNOT00000084022	LOC685767 Links NCBI RGD Ensembl Show fit	similar to OX-2 membrane glycoprotein precursor (MRC OX-2 antigen) (CD200 antigen)
chr17_+_32516679 Show fit	6.64	ENSRNOT00000032707	Serpinb9d Links NCBI RGD Ensembl Show fit	serine (or cysteine) peptidase inhibitor, clade B, member 9d
chr4_-_161587222 Show fit	6.56	ENSRNOT00000050834	Tead4 Links NCBI RGD Ensembl Show fit	TEA domain transcription factor 4
chr12_-_40686249 Show fit	6.36	ENSRNOT00000042264	LOC100909911 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S20-like
chr8_+_93439648 Show fit	6.30	ENSRNOT00000043008	LOC100359563 Links NCBI RGD Ensembl Show fit	ribosomal protein S20-like
chr6_+_135866739 Show fit	6.30	ENSRNOT00000013460	Exoc3l4 Links NCBI RGD Ensembl Show fit	exocyst complex component 3-like 4
chr3_-_80842916 Show fit	6.28	ENSRNOT00000033978	Mdk Links NCBI RGD Ensembl Show fit	midkine
chr6_-_143702033 Show fit	6.27	ENSRNOT00000051410	AABR07065886.1 Links NCBI RGD Ensembl Show fit
chr4_+_179398621 Show fit	6.20	ENSRNOT00000049474 ENSRNOT00000067506	Lrmp Links NCBI RGD Ensembl Show fit	lymphoid-restricted membrane protein
chr13_+_99220510 Show fit	6.17	ENSRNOT00000004519	Tmem63a Links NCBI RGD Ensembl Show fit	transmembrane protein 63a
chr4_-_163214678 Show fit	6.09	ENSRNOT00000091602	Clec1a Links NCBI RGD Ensembl Show fit	C-type lectin domain family 1, member A
chr19_-_25914689 Show fit	6.05	ENSRNOT00000091994 ENSRNOT00000039354	Nf1x Links NCBI RGD Ensembl Show fit	nuclear factor 1 X
chr8_-_62616828 Show fit	6.02	ENSRNOT00000068340	Arid3b Links NCBI RGD Ensembl Show fit	AT-rich interaction domain 3B
chr5_+_135687538 Show fit	5.97	ENSRNOT00000091664	AC126292.2 Links NCBI RGD Ensembl Show fit
chr5_-_136053210 Show fit	5.94	ENSRNOT00000025903	Kif2c Links NCBI RGD Ensembl Show fit	kinesin family member 2C
chr11_+_68105369 Show fit	5.89	ENSRNOT00000046888	Parp14 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 14
chr3_+_28416954 Show fit	5.75	ENSRNOT00000043533	Kynu Links NCBI RGD Ensembl Show fit	kynureninase
chr18_-_30781292 Show fit	5.74	ENSRNOT00000027125	Taf7 Links NCBI RGD Ensembl Show fit	TATA-box binding protein associated factor 7
chr8_+_48805684 Show fit	5.63	ENSRNOT00000064041	Bcl9l Links NCBI RGD Ensembl Show fit	B-cell CLL/lymphoma 9-like
chr1_+_128637049 Show fit	5.61	ENSRNOT00000018639	Ttc23 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 23
chr6_-_1534488 Show fit	5.52	ENSRNOT00000006824	Cebpz Links NCBI RGD Ensembl Show fit	CCAAT/enhancer binding protein zeta
chr13_-_102643223 Show fit	5.51	ENSRNOT00000003155	Hlx Links NCBI RGD Ensembl Show fit	H2.0-like homeobox
chr2_-_185444897 Show fit	5.45	ENSRNOT00000016329	Rps3a Links NCBI RGD Ensembl Show fit	ribosomal protein S3a
chr3_-_114235933 Show fit	5.44	ENSRNOT00000023939	Duox2 Links NCBI RGD Ensembl Show fit	dual oxidase 2
chr1_-_98521551 Show fit	5.39	ENSRNOT00000081922	Siglec10 Links NCBI RGD Ensembl Show fit	sialic acid binding Ig-like lectin 10
chr10_-_94652658 Show fit	5.39	ENSRNOT00000017371	Ern1 Links NCBI RGD Ensembl Show fit	endoplasmic reticulum to nucleus signaling 1
chr20_+_8486265 Show fit	5.38	ENSRNOT00000072213	LOC100909911 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S20-like
chr3_-_37480984 Show fit	5.30	ENSRNOT00000030373	Nmi Links NCBI RGD Ensembl Show fit	N-myc (and STAT) interactor
chr8_-_115179191 Show fit	5.29	ENSRNOT00000017224	Parp3 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 3
chr2_-_88763733 Show fit	5.21	ENSRNOT00000059424	LOC688389 Links NCBI RGD Ensembl Show fit	similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 12
chr10_+_57040267 Show fit	5.11	ENSRNOT00000026207	Arrb2 Links NCBI RGD Ensembl Show fit	arrestin, beta 2
chr16_+_75744786 Show fit	5.07	ENSRNOT00000032368	Xkr5 Links NCBI RGD Ensembl Show fit	XK related 5
chr4_-_21920651 Show fit	5.06	ENSRNOT00000066211	Tmem243 Links NCBI RGD Ensembl Show fit	transmembrane protein 243
chr7_+_144064931 Show fit	5.04	ENSRNOT00000048504	Prr13 Links NCBI RGD Ensembl Show fit	proline rich 13
chr6_-_77421286 Show fit	5.04	ENSRNOT00000011453	Nkx2-1 Links NCBI RGD Ensembl Show fit	NK2 homeobox 1
chr1_+_201117630 Show fit	5.04	ENSRNOT00000077908	Tacc2 Links NCBI RGD Ensembl Show fit	transforming, acidic coiled-coil containing protein 2
chr1_-_87191588 Show fit	5.04	ENSRNOT00000027998	LOC100361913 Links NCBI RGD Ensembl Show fit	rCG54286-like
chr1_-_217902473 Show fit	5.02	ENSRNOT00000028329	Ano1 Links NCBI RGD Ensembl Show fit	anoctamin 1
chr1_-_91855983 Show fit	4.98	ENSRNOT00000017172	Rgs9bp Links NCBI RGD Ensembl Show fit	regulator of G protein signaling 9 binding protein
chr2_-_198412350 Show fit	4.93	ENSRNOT00000040210	LOC100912489 Links NCBI RGD Ensembl Show fit	histone H4-like
chr16_-_85305782 Show fit	4.87	ENSRNOT00000067511 ENSRNOT00000076737	Tnfsf13b Links NCBI RGD Ensembl Show fit	tumor necrosis factor superfamily member 13b
chr2_-_257376756 Show fit	4.87	ENSRNOT00000065811	Gipc2 Links NCBI RGD Ensembl Show fit	GIPC PDZ domain containing family, member 2
chr3_+_177397892 Show fit	4.85	ENSRNOT00000078261	AABR07054983.1 Links NCBI RGD Ensembl Show fit
chr17_+_76079720 Show fit	4.84	ENSRNOT00000073933	Proser2 Links NCBI RGD Ensembl Show fit	proline and serine rich 2
chr11_-_71695000 Show fit	4.82	ENSRNOT00000073550	Ubxn7 Links NCBI RGD Ensembl Show fit	UBX domain protein 7
chr13_+_91334004 Show fit	4.69	ENSRNOT00000041384	LOC108352650 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S29
chr2_-_235852708 Show fit	4.69	ENSRNOT00000009046 ENSRNOT00000005772	Rpl34 Links NCBI RGD Ensembl Show fit	ribosomal protein L34
chrX_+_159158194 Show fit	4.68	ENSRNOT00000043820 ENSRNOT00000001169 ENSRNOT00000083502	Fhl1 Links NCBI RGD Ensembl Show fit	four and a half LIM domains 1
chr1_+_101517714 Show fit	4.67	ENSRNOT00000028423	Plekha4 Links NCBI RGD Ensembl Show fit	pleckstrin homology domain containing A4
chr10_+_57064482 Show fit	4.63	ENSRNOT00000046807	Zmynd15 Links NCBI RGD Ensembl Show fit	zinc finger, MYND-type containing 15
chr4_+_56549739 Show fit	4.62	ENSRNOT00000084597	Hilpda Links NCBI RGD Ensembl Show fit	hypoxia inducible lipid droplet-associated
chr8_+_116754178 Show fit	4.49	ENSRNOT00000068295 ENSRNOT00000084429	Uba7 Links NCBI RGD Ensembl Show fit	ubiquitin-like modifier activating enzyme 7
chrX_-_19386541 Show fit	4.43	ENSRNOT00000072722	AABR07037356.1 Links NCBI RGD Ensembl Show fit
chr5_+_104394119 Show fit	4.43	ENSRNOT00000093557 ENSRNOT00000093462	Adamtsl1 Links NCBI RGD Ensembl Show fit	ADAMTS-like 1
chr8_-_49573742 Show fit	4.38	ENSRNOT00000021926	Il10ra Links NCBI RGD Ensembl Show fit	interleukin 10 receptor subunit alpha
chr6_-_125590049 Show fit	4.36	ENSRNOT00000006371	Tc2n Links NCBI RGD Ensembl Show fit	tandem C2 domains, nuclear
chr11_+_64882288 Show fit	4.29	ENSRNOT00000077727	Pla1a Links NCBI RGD Ensembl Show fit	phospholipase A1 member A
chr10_-_66482150 Show fit	4.23	ENSRNOT00000048407	Ksr1 Links NCBI RGD Ensembl Show fit	kinase suppressor of ras 1
chr17_+_4212890 Show fit	4.23	ENSRNOT00000024467	Testin Links NCBI RGD Ensembl Show fit	testin gene
chr3_-_171957996 Show fit	4.12	ENSRNOT00000036546	Apcdd1l Links NCBI RGD Ensembl Show fit	APC down-regulated 1 like
chr1_-_167708685 Show fit	4.12	ENSRNOT00000092857 ENSRNOT00000024992	Trim21 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 21
chr3_+_91191837 Show fit	4.11	ENSRNOT00000006097	Rag2 Links NCBI RGD Ensembl Show fit	recombination activating 2
chr10_-_19652898 Show fit	4.11	ENSRNOT00000009648	Spdl1 Links NCBI RGD Ensembl Show fit	spindle apparatus coiled-coil protein 1
chr17_-_81002838 Show fit	4.09	ENSRNOT00000089807	St8sia6 Links NCBI RGD Ensembl Show fit	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
chr3_-_95418679 Show fit	4.08	ENSRNOT00000018074	Rcn1 Links NCBI RGD Ensembl Show fit	reticulocalbin 1
chr4_-_113957774 Show fit	4.01	ENSRNOT00000011921	Ino80b Links NCBI RGD Ensembl Show fit	INO80 complex subunit B
chr12_-_2786628 Show fit	4.00	ENSRNOT00000001348	RGD1564571 Links NCBI RGD Ensembl Show fit	similar to DC-SIGN
chr4_-_114823500 Show fit	3.99	ENSRNOT00000089870	NEWGENE_1562258 Links NCBI RGD Ensembl Show fit	INO80 complex subunit B
chr4_+_28989115 Show fit	3.97	ENSRNOT00000075326	Gng11 Links NCBI RGD Ensembl Show fit	G protein subunit gamma 11
chr2_-_149563905 Show fit	3.97	ENSRNOT00000086186	Igsf10 Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily, member 10
chr1_-_234704792 Show fit	3.96	ENSRNOT00000017405	Carnmt1 Links NCBI RGD Ensembl Show fit	carnosine N-methyltransferase 1
chr2_+_208738132 Show fit	3.95	ENSRNOT00000023972	AABR07012795.1 Links NCBI RGD Ensembl Show fit
chrX_-_123600890 Show fit	3.95	ENSRNOT00000067942	Sept6 Links NCBI RGD Ensembl Show fit	septin 6
chr11_+_38035611 Show fit	3.92	ENSRNOT00000087603 ENSRNOT00000002695	Mx2 Links NCBI RGD Ensembl Show fit	MX dynamin like GTPase 2
chr1_+_15062432 Show fit	3.92	ENSRNOT00000016286	Ifngr1 Links NCBI RGD Ensembl Show fit	interferon gamma receptor 1
chr1_+_86972244 Show fit	3.92	ENSRNOT00000036907	Rinl Links NCBI RGD Ensembl Show fit	Ras and Rab interactor-like
chr13_+_52588917 Show fit	3.92	ENSRNOT00000011999	Phlda3 Links NCBI RGD Ensembl Show fit	pleckstrin homology-like domain, family A, member 3
chr2_+_60920257 Show fit	3.92	ENSRNOT00000025170	C1qtnf3 Links NCBI RGD Ensembl Show fit	C1q and tumor necrosis factor related protein 3
chr16_+_41079444 Show fit	3.90	ENSRNOT00000015623	Neil3 Links NCBI RGD Ensembl Show fit	nei-like DNA glycosylase 3
chr19_+_60017746 Show fit	3.88	ENSRNOT00000042623	Pard3 Links NCBI RGD Ensembl Show fit	par-3 family cell polarity regulator
chr7_+_144065650 Show fit	3.87	ENSRNOT00000090695	Prr13 Links NCBI RGD Ensembl Show fit	proline rich 13
chr8_-_66863476 Show fit	3.81	ENSRNOT00000018820	Rplp1 Links NCBI RGD Ensembl Show fit	ribosomal protein lateral stalk subunit P1
chr1_-_167347490 Show fit	3.79	ENSRNOT00000076499	Rhog Links NCBI RGD Ensembl Show fit	ras homolog family member G
chr3_-_2123820 Show fit	3.76	ENSRNOT00000086843	Ehmt1 Links NCBI RGD Ensembl Show fit	euchromatic histone lysine methyltransferase 1
chr15_-_12513931 Show fit	3.72	ENSRNOT00000010103	Atxn7 Links NCBI RGD Ensembl Show fit	ataxin 7
chr17_-_66295014 Show fit	3.71	ENSRNOT00000023974	Mtr Links NCBI RGD Ensembl Show fit	5-methyltetrahydrofolate-homocysteine methyltransferase
chr16_+_50016857 Show fit	3.71	ENSRNOT00000035781	Tlr3 Links NCBI RGD Ensembl Show fit	toll-like receptor 3
chr7_-_23953002 Show fit	3.69	ENSRNOT00000047587	RGD1563124 Links NCBI RGD Ensembl Show fit	similar to 40S ribosomal protein S20
chr7_+_31784438 Show fit	3.65	ENSRNOT00000010914 ENSRNOT00000010929	Ikbip Links NCBI RGD Ensembl Show fit	IKBKB interacting protein
chr20_-_5476193 Show fit	3.64	ENSRNOT00000044975	Tapbp Links NCBI RGD Ensembl Show fit	TAP binding protein
chrX_-_159891326 Show fit	3.63	ENSRNOT00000001154	Rbmx Links NCBI RGD Ensembl Show fit	RNA binding motif protein, X-linked
chr1_-_214159157 Show fit	3.59	ENSRNOT00000091292 ENSRNOT00000022241	Rnh1 Links NCBI RGD Ensembl Show fit	ribonuclease/angiogenin inhibitor 1
chr3_+_114236718 Show fit	3.58	ENSRNOT00000024201	Duoxa2 Links NCBI RGD Ensembl Show fit	dual oxidase maturation factor 2
chr5_-_150653172 Show fit	3.56	ENSRNOT00000072028	Med18 Links NCBI RGD Ensembl Show fit	mediator complex subunit 18
chr5_+_135351816 Show fit	3.55	ENSRNOT00000082602	Ipp Links NCBI RGD Ensembl Show fit	intracisternal A particle-promoted polypeptide
chr17_-_66288202 Show fit	3.51	ENSRNOT00000083172	Mtr Links NCBI RGD Ensembl Show fit	5-methyltetrahydrofolate-homocysteine methyltransferase
chr10_-_5344121 Show fit	3.45	ENSRNOT00000003479	Nubp1 Links NCBI RGD Ensembl Show fit	nucleotide binding protein 1
chr8_-_126495347 Show fit	3.42	ENSRNOT00000013467	Cmc1 Links NCBI RGD Ensembl Show fit	C-x(9)-C motif containing 1
chr2_+_231941794 Show fit	3.40	ENSRNOT00000091475	AABR07013288.4 Links NCBI RGD Ensembl Show fit
chr18_+_68408890 Show fit	3.32	ENSRNOT00000039702	Ccdc68 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 68
chr4_+_87943152 Show fit	3.32	ENSRNOT00000080536	Vom1r78 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 78
chr4_-_97784842 Show fit	3.31	ENSRNOT00000007698	Gadd45a Links NCBI RGD Ensembl Show fit	growth arrest and DNA-damage-inducible, alpha
chr9_-_54351339 Show fit	3.30	ENSRNOT00000080522	Stat1 Links NCBI RGD Ensembl Show fit	signal transducer and activator of transcription 1
chr3_+_72191533 Show fit	3.30	ENSRNOT00000044319	Ube2l6 Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2L 6
chr9_-_65329066 Show fit	3.28	ENSRNOT00000018284	Ppil3 Links NCBI RGD Ensembl Show fit	peptidylprolyl isomerase like 3
chr16_-_60427474 Show fit	3.26	ENSRNOT00000051720	Ppp1r3b Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 3B

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
12.2	60.9	GO:0002408	myeloid dendritic cell chemotaxis(GO:0002408)
8.1	32.3	GO:0045627	positive regulation of T-helper 1 cell differentiation(GO:0045627)
6.9	20.7	GO:0043605	cellular amide catabolic process(GO:0043605)
5.2	20.8	GO:1903984	positive regulation of TRAIL-activated apoptotic signaling pathway(GO:1903984)
4.8	33.8	GO:0045343	MHC class I biosynthetic process(GO:0045341) regulation of MHC class I biosynthetic process(GO:0045343) positive regulation of MHC class I biosynthetic process(GO:0045345)
4.0	12.0	GO:0010847	regulation of chromatin assembly(GO:0010847) protein poly-ADP-ribosylation(GO:0070212)
4.0	11.9	GO:0019677	NAD catabolic process(GO:0019677)
3.8	15.1	GO:1903225	negative regulation of endodermal cell differentiation(GO:1903225)
3.4	10.2	GO:0002481	antigen processing and presentation of exogenous peptide antigen via MHC class Ib(GO:0002477) antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent(GO:0002481) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway(GO:0002488) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent(GO:0002489) positive regulation of antigen processing and presentation of peptide antigen(GO:0002585) cytosol to ER transport(GO:0046967) peptide antigen transport(GO:0046968)
3.4	10.2	GO:0001807	regulation of type IV hypersensitivity(GO:0001807)
3.3	16.6	GO:0002636	positive regulation of germinal center formation(GO:0002636) B cell costimulation(GO:0031296)
3.3	9.9	GO:0072566	chemokine (C-X-C motif) ligand 1 production(GO:0072566) regulation of chemokine (C-X-C motif) ligand 1 production(GO:2000338)
3.3	9.8	GO:0002554	serotonin secretion by platelet(GO:0002554)
3.1	9.3	GO:0006117	acetaldehyde metabolic process(GO:0006117)
2.8	16.7	GO:0010266	response to vitamin B1(GO:0010266) maintenance of protein location in mitochondrion(GO:0072656)
2.8	11.1	GO:0030886	negative regulation of myeloid dendritic cell activation(GO:0030886)
2.7	10.7	GO:0060857	establishment of glial blood-brain barrier(GO:0060857)
2.7	10.6	GO:1903237	negative regulation of leukocyte tethering or rolling(GO:1903237)
2.6	21.2	GO:0070842	aggresome assembly(GO:0070842)
2.5	7.5	GO:1901492	positive regulation of lymphangiogenesis(GO:1901492)
2.4	9.7	GO:0006272	leading strand elongation(GO:0006272)
2.4	7.1	GO:2001205	negative regulation of osteoclast development(GO:2001205)
2.0	12.1	GO:0035990	tendon cell differentiation(GO:0035990) tendon formation(GO:0035992)
2.0	8.0	GO:1990375	baculum development(GO:1990375)
2.0	17.6	GO:0003374	dynamin polymerization involved in membrane fission(GO:0003373) dynamin polymerization involved in mitochondrial fission(GO:0003374)
1.9	7.7	GO:0035519	protein K29-linked ubiquitination(GO:0035519)
1.8	7.4	GO:0090290	positive regulation of osteoclast proliferation(GO:0090290)
1.8	7.3	GO:1901423	response to benzene(GO:1901423)
1.8	5.4	GO:0042335	cuticle development(GO:0042335) hypophysis morphogenesis(GO:0048850)
1.8	9.0	GO:0042270	protection from natural killer cell mediated cytotoxicity(GO:0042270)
1.8	10.6	GO:1900041	negative regulation of interleukin-2 secretion(GO:1900041)
1.8	5.3	GO:0032687	negative regulation of interferon-alpha production(GO:0032687)
1.8	5.3	GO:1990166	protein localization to site of double-strand break(GO:1990166)
1.6	14.6	GO:0015705	iodide transport(GO:0015705)
1.6	7.8	GO:0032020	ISG15-protein conjugation(GO:0032020)
1.6	10.9	GO:0033634	positive regulation of integrin activation(GO:0033625) positive regulation of cell-cell adhesion mediated by integrin(GO:0033634)
1.5	4.6	GO:0035425	autocrine signaling(GO:0035425)
1.4	7.2	GO:1904640	response to methionine(GO:1904640)
1.4	5.8	GO:0019805	quinolinate biosynthetic process(GO:0019805)
1.3	8.0	GO:0097490	trunk segmentation(GO:0035290) trunk neural crest cell migration(GO:0036484) ventral trunk neural crest cell migration(GO:0036486) sympathetic neuron projection extension(GO:0097490) sympathetic neuron projection guidance(GO:0097491)
1.3	5.1	GO:0002032	desensitization of G-protein coupled receptor protein signaling pathway by arrestin(GO:0002032)
1.3	6.3	GO:0030421	defecation(GO:0030421)
1.3	21.3	GO:0010248	establishment or maintenance of transmembrane electrochemical gradient(GO:0010248)
1.2	7.4	GO:0045329	carnitine biosynthetic process(GO:0045329)
1.2	3.6	GO:0002397	MHC class I protein complex assembly(GO:0002397)
1.2	3.5	GO:0072697	protein localization to cell cortex(GO:0072697)
1.1	6.5	GO:0045080	positive regulation of chemokine biosynthetic process(GO:0045080)
1.1	3.2	GO:1903972	regulation of macrophage colony-stimulating factor signaling pathway(GO:1902226) regulation of response to macrophage colony-stimulating factor(GO:1903969) regulation of cellular response to macrophage colony-stimulating factor stimulus(GO:1903972) microglial cell migration(GO:1904124) regulation of microglial cell migration(GO:1904139)
1.1	10.7	GO:0060340	positive regulation of type I interferon-mediated signaling pathway(GO:0060340)
1.0	4.1	GO:0002331	pre-B cell allelic exclusion(GO:0002331)
1.0	9.0	GO:0061303	cornea development in camera-type eye(GO:0061303)
1.0	5.9	GO:0030951	establishment or maintenance of microtubule cytoskeleton polarity(GO:0030951)
0.9	5.4	GO:0036289	peptidyl-serine autophosphorylation(GO:0036289)
0.8	5.0	GO:0021759	globus pallidus development(GO:0021759)
0.8	3.3	GO:0034240	negative regulation of macrophage fusion(GO:0034240)
0.8	4.1	GO:0001574	ganglioside biosynthetic process(GO:0001574)
0.8	3.2	GO:1902623	leukocyte chemotaxis involved in inflammatory response(GO:0002232) negative regulation of neutrophil migration(GO:1902623)
0.8	11.7	GO:0010818	T cell chemotaxis(GO:0010818)
0.8	4.7	GO:0046292	formaldehyde metabolic process(GO:0046292)
0.8	3.8	GO:1904401	cellular response to Thyroid stimulating hormone(GO:1904401)
0.8	2.3	GO:1901740	negative regulation of myoblast fusion(GO:1901740)
0.8	20.3	GO:0006855	drug transmembrane transport(GO:0006855)
0.7	2.2	GO:0045716	positive regulation of low-density lipoprotein particle receptor biosynthetic process(GO:0045716)
0.7	7.8	GO:0001886	endothelial cell morphogenesis(GO:0001886)
0.7	3.9	GO:0071638	negative regulation of monocyte chemotactic protein-1 production(GO:0071638)
0.6	3.9	GO:0003383	apical constriction(GO:0003383)
0.6	1.9	GO:0015722	canalicular bile acid transport(GO:0015722)
0.6	10.3	GO:0061051	positive regulation of cell growth involved in cardiac muscle cell development(GO:0061051)
0.6	2.5	GO:0060474	positive regulation of sperm motility involved in capacitation(GO:0060474)
0.5	1.6	GO:1990091	sodium-dependent self proteolysis(GO:1990091)
0.5	8.0	GO:0043312	neutrophil degranulation(GO:0043312)
0.5	4.1	GO:0090086	negative regulation of protein deubiquitination(GO:0090086)
0.5	3.6	GO:2000609	regulation of thyroid hormone generation(GO:2000609)
0.5	9.0	GO:0017121	phospholipid scrambling(GO:0017121)
0.5	1.5	GO:1905006	positive regulation of activation-induced cell death of T cells(GO:0070237) negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation(GO:1905006)
0.4	6.3	GO:0051601	exocyst localization(GO:0051601)
0.4	6.6	GO:1902459	positive regulation of stem cell population maintenance(GO:1902459)
0.4	6.1	GO:0021684	cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
0.4	2.6	GO:0060723	regulation of spongiotrophoblast cell proliferation(GO:0060721) regulation of cell proliferation involved in embryonic placenta development(GO:0060723)
0.4	2.1	GO:1900425	negative regulation of defense response to bacterium(GO:1900425)
0.4	5.0	GO:0022027	interkinetic nuclear migration(GO:0022027)
0.4	2.3	GO:0036438	maintenance of lens transparency(GO:0036438)
0.4	3.8	GO:0018026	peptidyl-lysine monomethylation(GO:0018026)
0.4	1.9	GO:0016557	peroxisome membrane biogenesis(GO:0016557)
0.4	1.1	GO:0018199	peptidyl-glutamine modification(GO:0018199)
0.3	5.5	GO:0000185	activation of MAPKKK activity(GO:0000185)
0.3	2.3	GO:0006268	DNA unwinding involved in DNA replication(GO:0006268)
0.3	8.3	GO:0019884	antigen processing and presentation of exogenous antigen(GO:0019884)
0.3	1.6	GO:0008295	spermidine biosynthetic process(GO:0008295)
0.3	1.8	GO:0006449	regulation of translational termination(GO:0006449)
0.3	4.9	GO:0045653	negative regulation of megakaryocyte differentiation(GO:0045653)
0.3	4.1	GO:0034501	protein localization to kinetochore(GO:0034501)
0.3	1.1	GO:1902994	negative regulation of amyloid precursor protein biosynthetic process(GO:0042985) regulation of phospholipid efflux(GO:1902994) positive regulation of phospholipid efflux(GO:1902995)
0.3	1.4	GO:0036123	histone H3-K9 dimethylation(GO:0036123)
0.3	3.3	GO:0005981	regulation of glycogen catabolic process(GO:0005981)
0.3	2.6	GO:0015760	hexose phosphate transport(GO:0015712) glucose-6-phosphate transport(GO:0015760)
0.3	1.3	GO:0010032	meiotic chromosome condensation(GO:0010032)
0.2	5.0	GO:0050908	detection of light stimulus involved in visual perception(GO:0050908) detection of light stimulus involved in sensory perception(GO:0050962)
0.2	0.7	GO:0002462	tolerance induction to nonself antigen(GO:0002462)
0.2	5.7	GO:0035067	negative regulation of histone acetylation(GO:0035067)
0.2	1.6	GO:0030397	membrane disassembly(GO:0030397) nuclear envelope disassembly(GO:0051081)
0.2	6.5	GO:1900027	regulation of ruffle assembly(GO:1900027)
0.2	0.6	GO:0006552	leucine catabolic process(GO:0006552)
0.2	2.1	GO:0032287	peripheral nervous system myelin maintenance(GO:0032287)
0.2	3.0	GO:1902358	oxalate transport(GO:0019532) sulfate transmembrane transport(GO:1902358)
0.2	15.5	GO:0042246	tissue regeneration(GO:0042246)
0.2	0.5	GO:2000567	memory T cell activation(GO:0035709) regulation of memory T cell activation(GO:2000567) positive regulation of memory T cell activation(GO:2000568)
0.2	0.5	GO:1905243	response to 3,3',5-triiodo-L-thyronine(GO:1905242) cellular response to 3,3',5-triiodo-L-thyronine(GO:1905243)
0.2	3.7	GO:0016578	histone deubiquitination(GO:0016578)
0.2	2.2	GO:0034285	response to sucrose(GO:0009744) response to disaccharide(GO:0034285)
0.2	5.5	GO:0010718	positive regulation of epithelial to mesenchymal transition(GO:0010718)
0.1	7.4	GO:0060612	adipose tissue development(GO:0060612)
0.1	5.2	GO:0006509	membrane protein ectodomain proteolysis(GO:0006509)
0.1	0.7	GO:0010694	positive regulation of alkaline phosphatase activity(GO:0010694)
0.1	1.2	GO:0048280	vesicle fusion with Golgi apparatus(GO:0048280)
0.1	5.2	GO:1902475	L-alpha-amino acid transmembrane transport(GO:1902475)
0.1	6.1	GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032435)
0.1	4.7	GO:0010972	negative regulation of G2/M transition of mitotic cell cycle(GO:0010972)
0.1	12.5	GO:0030901	midbrain development(GO:0030901)
0.1	0.8	GO:0034201	response to oleic acid(GO:0034201)
0.1	0.9	GO:0048739	cardiac muscle fiber development(GO:0048739)
0.1	14.0	GO:0042157	lipoprotein metabolic process(GO:0042157)
0.1	14.9	GO:0035023	regulation of Rho protein signal transduction(GO:0035023)
0.1	1.7	GO:0043552	positive regulation of phosphatidylinositol 3-kinase activity(GO:0043552)
0.1	7.6	GO:0019882	antigen processing and presentation(GO:0019882)
0.1	3.9	GO:0051898	negative regulation of protein kinase B signaling(GO:0051898)
0.1	1.1	GO:0002031	G-protein coupled receptor internalization(GO:0002031)
0.1	1.6	GO:0010758	regulation of macrophage chemotaxis(GO:0010758)
0.1	1.7	GO:0030449	regulation of complement activation(GO:0030449)
0.1	14.3	GO:0007596	blood coagulation(GO:0007596)
0.1	3.9	GO:0006284	base-excision repair(GO:0006284)
0.1	1.6	GO:0097286	iron ion import(GO:0097286)
0.1	3.3	GO:0000413	protein peptidyl-prolyl isomerization(GO:0000413)
0.1	0.5	GO:1904491	protein localization to ciliary transition zone(GO:1904491)
0.1	16.3	GO:0010951	negative regulation of endopeptidase activity(GO:0010951)
0.1	0.7	GO:0051292	nuclear pore complex assembly(GO:0051292)
0.1	2.4	GO:0006182	cGMP biosynthetic process(GO:0006182)
0.0	1.7	GO:0000387	spliceosomal snRNP assembly(GO:0000387)
0.0	0.4	GO:0006390	transcription from mitochondrial promoter(GO:0006390)
0.0	30.8	GO:0006412	translation(GO:0006412)
0.0	8.0	GO:0030198	extracellular matrix organization(GO:0030198) extracellular structure organization(GO:0043062)
0.0	2.3	GO:0008542	visual learning(GO:0008542)
0.0	0.6	GO:0051457	maintenance of protein location in nucleus(GO:0051457)
0.0	4.0	GO:0006338	chromatin remodeling(GO:0006338)
0.0	0.2	GO:0071000	response to magnetism(GO:0071000)
0.0	4.0	GO:0006518	peptide metabolic process(GO:0006518)
0.0	3.5	GO:0035335	peptidyl-tyrosine dephosphorylation(GO:0035335)
0.0	0.9	GO:0031648	protein destabilization(GO:0031648)
0.0	0.1	GO:1903608	protein localization to cytoplasmic stress granule(GO:1903608)
0.0	1.0	GO:0019098	reproductive behavior(GO:0019098)
0.0	0.9	GO:0060976	coronary vasculature development(GO:0060976)
0.0	3.6	GO:0007286	spermatid development(GO:0007286)
0.0	1.2	GO:0030500	regulation of bone mineralization(GO:0030500)
0.0	1.8	GO:0051209	release of sequestered calcium ion into cytosol(GO:0051209) negative regulation of sequestering of calcium ion(GO:0051283)
0.0	3.2	GO:0015992	proton transport(GO:0015992)
0.0	0.2	GO:0030643	cellular phosphate ion homeostasis(GO:0030643) cellular divalent inorganic anion homeostasis(GO:0072501) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.0	0.0	GO:0032741	positive regulation of interleukin-18 production(GO:0032741)
0.0	4.0	GO:0008380	RNA splicing(GO:0008380)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
6.9	20.8	GO:1990622	CHOP-ATF3 complex(GO:1990622)
3.8	15.1	GO:0005588	collagen type V trimer(GO:0005588)
3.0	26.8	GO:0031313	extrinsic component of endosome membrane(GO:0031313)
2.8	8.3	GO:0008537	proteasome activator complex(GO:0008537)
2.7	10.6	GO:0020005	symbiont-containing vacuole membrane(GO:0020005)
2.6	15.8	GO:1990111	spermatoproteasome complex(GO:1990111)
2.0	13.9	GO:0042825	TAP complex(GO:0042825)
1.8	21.3	GO:0005890	sodium:potassium-exchanging ATPase complex(GO:0005890)
1.3	5.4	GO:1990630	IRE1-RACK1-PP2A complex(GO:1990630)
1.2	9.7	GO:0005658	alpha DNA polymerase:primase complex(GO:0005658)
1.1	3.2	GO:1990682	CSF1-CSF1R complex(GO:1990682)
1.0	8.0	GO:0044194	cytolytic granule(GO:0044194) tertiary granule(GO:0070820)
0.9	7.4	GO:0097452	GAIT complex(GO:0097452)
0.9	7.8	GO:0098651	basement membrane collagen trimer(GO:0098651)
0.8	8.0	GO:0097550	transcriptional preinitiation complex(GO:0097550)
0.8	3.0	GO:0070876	SOSS complex(GO:0070876)
0.7	3.6	GO:0044530	supraspliceosomal complex(GO:0044530)
0.7	4.3	GO:0034715	pICln-Sm protein complex(GO:0034715)
0.7	10.2	GO:0031254	uropod(GO:0001931) cell trailing edge(GO:0031254)
0.6	1.9	GO:0046691	intracellular canaliculus(GO:0046691)
0.6	5.7	GO:0008024	cyclin/CDK positive transcription elongation factor complex(GO:0008024)
0.6	1.8	GO:0044614	nuclear pore cytoplasmic filaments(GO:0044614)
0.6	10.9	GO:0031258	lamellipodium membrane(GO:0031258)
0.6	10.3	GO:0031362	anchored component of external side of plasma membrane(GO:0031362)
0.5	4.8	GO:0034098	VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.4	6.2	GO:0000940	condensed chromosome outer kinetochore(GO:0000940)
0.4	21.2	GO:0016235	aggresome(GO:0016235)
0.4	2.1	GO:0097209	epidermal lamellar body(GO:0097209)
0.3	11.1	GO:0001772	immunological synapse(GO:0001772)
0.3	3.3	GO:0042587	glycogen granule(GO:0042587)
0.3	3.9	GO:0043219	lateral loop(GO:0043219)
0.3	32.7	GO:0016605	PML body(GO:0016605)
0.3	7.3	GO:0032588	trans-Golgi network membrane(GO:0032588)
0.3	6.3	GO:0000145	exocyst(GO:0000145)
0.2	4.0	GO:0031011	Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.2	2.3	GO:0042555	MCM complex(GO:0042555)
0.2	15.8	GO:0022627	cytosolic small ribosomal subunit(GO:0022627)
0.2	5.3	GO:0035861	site of double-strand break(GO:0035861)
0.2	13.4	GO:0030864	cortical actin cytoskeleton(GO:0030864)
0.2	5.9	GO:0035371	microtubule plus-end(GO:0035371)
0.2	4.9	GO:0000788	nuclear nucleosome(GO:0000788)
0.2	4.3	GO:0002080	acrosomal membrane(GO:0002080)
0.2	6.5	GO:0005834	heterotrimeric G-protein complex(GO:0005834)
0.2	52.8	GO:0009897	external side of plasma membrane(GO:0009897)
0.2	17.2	GO:0005604	basement membrane(GO:0005604)
0.2	1.3	GO:0000796	condensin complex(GO:0000796)
0.2	2.5	GO:0005686	U2 snRNP(GO:0005686)
0.2	3.2	GO:0019013	viral nucleocapsid(GO:0019013)
0.2	0.8	GO:0030689	Noc complex(GO:0030689)
0.1	36.1	GO:0005578	proteinaceous extracellular matrix(GO:0005578)
0.1	3.9	GO:0005581	collagen trimer(GO:0005581)
0.1	1.9	GO:0031231	integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.1	17.6	GO:0005741	mitochondrial outer membrane(GO:0005741)
0.1	16.7	GO:0031012	extracellular matrix(GO:0031012)
0.1	2.4	GO:0008074	guanylate cyclase complex, soluble(GO:0008074)
0.1	8.5	GO:0022625	cytosolic large ribosomal subunit(GO:0022625)
0.1	1.6	GO:0031907	peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1	4.1	GO:0030173	integral component of Golgi membrane(GO:0030173)
0.1	8.8	GO:0030176	integral component of endoplasmic reticulum membrane(GO:0030176)
0.1	5.3	GO:0031902	late endosome membrane(GO:0031902)
0.1	4.6	GO:0005811	lipid particle(GO:0005811)
0.1	0.7	GO:0031080	nuclear pore outer ring(GO:0031080)
0.1	1.1	GO:0001891	phagocytic cup(GO:0001891)
0.1	2.1	GO:0055038	recycling endosome membrane(GO:0055038)
0.1	18.0	GO:0005925	focal adhesion(GO:0005925)
0.1	8.4	GO:0032993	protein-DNA complex(GO:0032993)
0.1	1.2	GO:0012507	ER to Golgi transport vesicle membrane(GO:0012507)
0.1	14.4	GO:0016324	apical plasma membrane(GO:0016324)
0.0	3.5	GO:0031463	Cul3-RING ubiquitin ligase complex(GO:0031463)
0.0	3.3	GO:0071013	catalytic step 2 spliceosome(GO:0071013)
0.0	2.9	GO:0019005	SCF ubiquitin ligase complex(GO:0019005)
0.0	0.5	GO:0005859	muscle myosin complex(GO:0005859)
0.0	0.5	GO:0036038	MKS complex(GO:0036038)
0.0	1.4	GO:0005720	nuclear heterochromatin(GO:0005720)
0.0	3.9	GO:0001726	ruffle(GO:0001726)
0.0	1.8	GO:0005905	clathrin-coated pit(GO:0005905)
0.0	33.6	GO:0005730	nucleolus(GO:0005730)
0.0	8.2	GO:0005759	mitochondrial matrix(GO:0005759)
0.0	5.6	GO:0098852	lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0	15.6	GO:0031966	mitochondrial membrane(GO:0031966)
0.0	3.5	GO:0005814	centriole(GO:0005814)
0.0	1.2	GO:0016592	mediator complex(GO:0016592)
0.0	1.5	GO:0000118	histone deacetylase complex(GO:0000118)
0.0	1.5	GO:0005788	endoplasmic reticulum lumen(GO:0005788)
0.0	6.3	GO:0000785	chromatin(GO:0000785)
0.0	3.3	GO:0005635	nuclear envelope(GO:0005635)
0.0	10.0	GO:0005615	extracellular space(GO:0005615)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
5.4	26.8	GO:0019834	phospholipase A2 inhibitor activity(GO:0019834)
4.2	12.5	GO:0031735	CCR10 chemokine receptor binding(GO:0031735)
3.7	14.6	GO:0015111	iodide transmembrane transporter activity(GO:0015111)
3.4	10.2	GO:0015433	peptide antigen-transporting ATPase activity(GO:0015433) tapasin binding(GO:0046980)
3.3	9.9	GO:0070976	TIR domain binding(GO:0070976)
2.7	10.7	GO:0003726	double-stranded RNA adenosine deaminase activity(GO:0003726)
2.7	10.6	GO:0019002	GMP binding(GO:0019002)
1.9	5.8	GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds(GO:0016822) hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances(GO:0016823)
1.9	5.7	GO:0061628	H3K27me3 modified histone binding(GO:0061628)
1.7	5.1	GO:0031762	follicle-stimulating hormone receptor binding(GO:0031762) type 2A serotonin receptor binding(GO:0031826)
1.7	8.3	GO:0061133	endopeptidase activator activity(GO:0061133)
1.6	57.2	GO:0008009	chemokine activity(GO:0008009)
1.6	9.8	GO:0019767	IgE receptor activity(GO:0019767)
1.6	8.0	GO:0031798	type 1 metabotropic glutamate receptor binding(GO:0031798)
1.6	8.0	GO:0030348	syntaxin-3 binding(GO:0030348)
1.5	9.3	GO:0004024	alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
1.5	21.3	GO:0005391	sodium:potassium-exchanging ATPase activity(GO:0005391)
1.5	11.9	GO:0003956	NAD(P)+-protein-arginine ADP-ribosyltransferase activity(GO:0003956)
1.4	9.7	GO:0003896	DNA primase activity(GO:0003896)
1.4	13.6	GO:0019957	C-C chemokine binding(GO:0019957)
1.4	25.8	GO:0070628	proteasome binding(GO:0070628)
1.2	13.4	GO:0032036	myosin heavy chain binding(GO:0032036)
1.2	3.6	GO:0046979	TAP binding(GO:0046977) TAP1 binding(GO:0046978) TAP2 binding(GO:0046979)
1.2	10.9	GO:0022833	mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
1.1	23.1	GO:0003950	NAD+ ADP-ribosyltransferase activity(GO:0003950)
1.1	3.3	GO:0042296	ISG15 transferase activity(GO:0042296)
1.1	15.1	GO:0048407	platelet-derived growth factor binding(GO:0048407)
1.1	3.2	GO:0005157	macrophage colony-stimulating factor receptor binding(GO:0005157)
0.9	7.2	GO:0031419	S-methyltransferase activity(GO:0008172) cobalamin binding(GO:0031419)
0.9	20.3	GO:0017127	cholesterol transporter activity(GO:0017127)
0.9	4.4	GO:0004920	interleukin-10 receptor activity(GO:0004920)
0.7	4.3	GO:0008970	phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.7	17.0	GO:0004198	calcium-dependent cysteine-type endopeptidase activity(GO:0004198)
0.7	2.0	GO:0071208	histone pre-mRNA DCP binding(GO:0071208) U7 snRNA binding(GO:0071209)
0.6	9.0	GO:0042609	CD4 receptor binding(GO:0042609)
0.6	7.5	GO:0005172	vascular endothelial growth factor receptor binding(GO:0005172)
0.6	8.0	GO:0045499	chemorepellent activity(GO:0045499)
0.6	4.2	GO:0005078	MAP-kinase scaffold activity(GO:0005078)
0.6	5.4	GO:0016174	NAD(P)H oxidase activity(GO:0016174)
0.6	3.6	GO:0008428	ribonuclease inhibitor activity(GO:0008428)
0.6	2.3	GO:0008109	N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity(GO:0008109)
0.6	5.1	GO:0046974	histone methyltransferase activity (H3-K9 specific)(GO:0046974)
0.6	3.9	GO:0000405	bubble DNA binding(GO:0000405)
0.5	1.6	GO:0046592	polyamine oxidase activity(GO:0046592)
0.5	2.0	GO:0000822	inositol hexakisphosphate binding(GO:0000822)
0.5	41.3	GO:0033613	activating transcription factor binding(GO:0033613)
0.4	5.0	GO:0001161	intronic transcription regulatory region sequence-specific DNA binding(GO:0001161)
0.4	4.5	GO:0008641	small protein activating enzyme activity(GO:0008641)
0.4	16.8	GO:0017112	Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.4	10.3	GO:0005520	insulin-like growth factor binding(GO:0005520)
0.4	2.6	GO:0015119	hexose phosphate transmembrane transporter activity(GO:0015119) organophosphate:inorganic phosphate antiporter activity(GO:0015315) hexose-phosphate:inorganic phosphate antiporter activity(GO:0015526) glucose 6-phosphate:inorganic phosphate antiporter activity(GO:0061513)
0.4	3.3	GO:0031730	CCR5 chemokine receptor binding(GO:0031730)
0.4	3.3	GO:0043515	kinetochore binding(GO:0043515)
0.4	5.4	GO:0005161	platelet-derived growth factor receptor binding(GO:0005161)
0.4	1.8	GO:0072345	NAADP-sensitive calcium-release channel activity(GO:0072345)
0.3	8.9	GO:0005070	SH3/SH2 adaptor activity(GO:0005070)
0.3	8.0	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.3	7.4	GO:0031418	L-ascorbic acid binding(GO:0031418)
0.3	2.3	GO:1990446	U1 snRNP binding(GO:1990446)
0.3	5.9	GO:0051010	microtubule plus-end binding(GO:0051010)
0.3	9.0	GO:0043027	cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027)
0.3	1.5	GO:0034714	type III transforming growth factor beta receptor binding(GO:0034714)
0.3	20.7	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811)
0.3	1.7	GO:0008526	phosphatidylinositol transporter activity(GO:0008526)
0.3	9.7	GO:0005164	tumor necrosis factor receptor binding(GO:0005164)
0.2	7.7	GO:0061631	ubiquitin conjugating enzyme activity(GO:0061631)
0.2	4.7	GO:0032454	histone demethylase activity (H3-K9 specific)(GO:0032454)
0.2	0.7	GO:0050682	AF-2 domain binding(GO:0050682)
0.2	13.2	GO:0050840	extracellular matrix binding(GO:0050840)
0.2	60.0	GO:0003735	structural constituent of ribosome(GO:0003735)
0.2	1.1	GO:0090554	phosphatidylcholine-translocating ATPase activity(GO:0090554)
0.2	3.0	GO:0019531	oxalate transmembrane transporter activity(GO:0019531)
0.2	1.7	GO:0001846	opsonin binding(GO:0001846)
0.2	7.9	GO:0030544	Hsp70 protein binding(GO:0030544)
0.2	0.8	GO:0003987	acetate-CoA ligase activity(GO:0003987)
0.2	2.4	GO:0015379	potassium:chloride symporter activity(GO:0015379) potassium ion symporter activity(GO:0022820)
0.2	3.9	GO:0032266	phosphatidylinositol-3-phosphate binding(GO:0032266)
0.2	16.7	GO:0005496	steroid binding(GO:0005496)
0.2	0.5	GO:0023029	MHC class Ib protein binding(GO:0023029)
0.2	4.1	GO:0008373	sialyltransferase activity(GO:0008373)
0.2	14.9	GO:0005089	Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.2	20.8	GO:0001078	transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078)
0.1	1.9	GO:0015250	water channel activity(GO:0015250)
0.1	1.1	GO:0004703	G-protein coupled receptor kinase activity(GO:0004703)
0.1	14.5	GO:0003697	single-stranded DNA binding(GO:0003697)
0.1	0.5	GO:0030899	calcium-dependent ATPase activity(GO:0030899)
0.1	4.3	GO:0001205	transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205)
0.1	3.4	GO:0070003	threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.1	2.3	GO:0005149	interleukin-1 receptor binding(GO:0005149)
0.1	7.0	GO:0050661	NADP binding(GO:0050661)
0.1	3.5	GO:0051539	4 iron, 4 sulfur cluster binding(GO:0051539)
0.1	40.5	GO:0001228	transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.1	30.9	GO:0003924	GTPase activity(GO:0003924)
0.1	18.4	GO:0061135	endopeptidase inhibitor activity(GO:0004866) endopeptidase regulator activity(GO:0061135)
0.1	2.4	GO:0004383	guanylate cyclase activity(GO:0004383)
0.1	0.7	GO:0001848	complement binding(GO:0001848)
0.1	1.6	GO:0005521	lamin binding(GO:0005521)
0.1	3.3	GO:0003755	peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.1	5.2	GO:0015297	antiporter activity(GO:0015297)
0.1	4.4	GO:0030276	clathrin binding(GO:0030276)
0.1	2.1	GO:0043015	gamma-tubulin binding(GO:0043015)
0.1	2.9	GO:0016409	palmitoyltransferase activity(GO:0016409)
0.1	2.2	GO:0019200	carbohydrate kinase activity(GO:0019200)
0.1	3.7	GO:0003725	double-stranded RNA binding(GO:0003725)
0.1	0.9	GO:0051371	muscle alpha-actinin binding(GO:0051371)
0.1	0.9	GO:0050750	low-density lipoprotein particle receptor binding(GO:0050750)
0.1	4.2	GO:0004197	cysteine-type endopeptidase activity(GO:0004197)
0.1	4.8	GO:0043130	ubiquitin binding(GO:0043130)
0.1	6.0	GO:0001076	transcription factor activity, RNA polymerase II transcription factor binding(GO:0001076)
0.0	3.6	GO:0003727	single-stranded RNA binding(GO:0003727)
0.0	2.6	GO:0048029	monosaccharide binding(GO:0048029)
0.0	1.1	GO:0016755	transferase activity, transferring amino-acyl groups(GO:0016755)
0.0	0.6	GO:0003995	acyl-CoA dehydrogenase activity(GO:0003995)
0.0	3.7	GO:0019955	cytokine binding(GO:0019955)
0.0	6.7	GO:0004721	phosphoprotein phosphatase activity(GO:0004721)
0.0	0.2	GO:0071253	connexin binding(GO:0071253)
0.0	1.6	GO:0038024	cargo receptor activity(GO:0038024)
0.0	11.7	GO:0005198	structural molecule activity(GO:0005198)
0.0	0.9	GO:0042605	peptide antigen binding(GO:0042605)
0.0	5.2	GO:0030246	carbohydrate binding(GO:0030246)
0.0	2.5	GO:0004540	ribonuclease activity(GO:0004540)
0.0	0.5	GO:0008137	NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0	9.3	GO:0004842	ubiquitin-protein transferase activity(GO:0004842)
0.0	1.3	GO:0008201	heparin binding(GO:0008201)
0.0	0.8	GO:0005178	integrin binding(GO:0005178)
0.0	0.1	GO:0032794	GTPase activating protein binding(GO:0032794)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.8	14.9	SA MMP CYTOKINE CONNECTION	Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.
0.7	10.0	ST INTERFERON GAMMA PATHWAY	Interferon gamma pathway.
0.7	7.5	PID VEGF VEGFR PATHWAY	VEGF and VEGFR signaling network
0.6	13.6	PID TOLL ENDOGENOUS PATHWAY	Endogenous TLR signaling
0.5	22.9	NABA COLLAGENS	Genes encoding collagen proteins
0.4	16.9	PID SYNDECAN 4 PATHWAY	Syndecan-4-mediated signaling events
0.4	11.4	PID INTEGRIN2 PATHWAY	Beta2 integrin cell surface interactions
0.4	8.0	PID HEDGEHOG 2PATHWAY	Signaling events mediated by the Hedgehog family
0.4	24.5	PID ATF2 PATHWAY	ATF-2 transcription factor network
0.3	44.8	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.2	48.1	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins
0.2	5.0	PID RHODOPSIN PATHWAY	Visual signal transduction: Rods
0.2	52.7	NABA SECRETED FACTORS	Genes encoding secreted soluble factors
0.2	7.2	PID AURORA B PATHWAY	Aurora B signaling
0.2	9.8	PID BCR 5PATHWAY	BCR signaling pathway
0.2	7.7	PID FANCONI PATHWAY	Fanconi anemia pathway
0.1	5.5	PID IL12 2PATHWAY	IL12-mediated signaling events
0.1	7.3	PID ARF6 TRAFFICKING PATHWAY	Arf6 trafficking events
0.1	5.9	PID IL4 2PATHWAY	IL4-mediated signaling events
0.1	9.7	PID E2F PATHWAY	E2F transcription factor network
0.1	4.2	PID CERAMIDE PATHWAY	Ceramide signaling pathway
0.1	5.0	PID HNF3B PATHWAY	FOXA2 and FOXA3 transcription factor networks
0.1	6.5	PID TRKR PATHWAY	Neurotrophic factor-mediated Trk receptor signaling
0.1	1.6	PID INTEGRIN A9B1 PATHWAY	Alpha9 beta1 integrin signaling events
0.1	2.6	PID TNF PATHWAY	TNF receptor signaling pathway
0.1	7.6	PID P53 DOWNSTREAM PATHWAY	Direct p53 effectors
0.1	1.2	PID ARF 3PATHWAY	Arf1 pathway
0.1	1.7	PID ERBB1 INTERNALIZATION PATHWAY	Internalization of ErbB1
0.0	1.2	NABA PROTEOGLYCANS	Genes encoding proteoglycans
0.0	4.9	NABA MATRISOME ASSOCIATED	Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.0	0.8	PID CMYB PATHWAY	C-MYB transcription factor network
0.0	0.2	PID NEPHRIN NEPH1 PATHWAY	Nephrin/Neph1 signaling in the kidney podocyte

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.7	83.3	REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES	Genes involved in Chemokine receptors bind chemokines
1.1	10.0	REACTOME TRAF6 MEDIATED IRF7 ACTIVATION IN TLR7 8 OR 9 SIGNALING	Genes involved in TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling
1.1	63.7	REACTOME INTERFERON GAMMA SIGNALING	Genes involved in Interferon gamma signaling
0.8	14.4	REACTOME RIP MEDIATED NFKB ACTIVATION VIA DAI	Genes involved in RIP-mediated NFkB activation via DAI
0.8	26.8	REACTOME INTERFERON ALPHA BETA SIGNALING	Genes involved in Interferon alpha/beta signaling
0.7	20.8	REACTOME ACTIVATION OF GENES BY ATF4	Genes involved in Activation of Genes by ATF4
0.7	11.8	REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC	Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
0.7	8.9	REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS	Genes involved in Signal regulatory protein (SIRP) family interactions
0.7	9.8	REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN	Genes involved in Platelet Adhesion to exposed collagen
0.6	5.8	REACTOME TRYPTOPHAN CATABOLISM	Genes involved in Tryptophan catabolism
0.6	7.5	REACTOME VEGF LIGAND RECEPTOR INTERACTIONS	Genes involved in VEGF ligand-receptor interactions
0.6	9.7	REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1	Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1
0.5	20.1	REACTOME AMYLOIDS	Genes involved in Amyloids
0.4	16.2	REACTOME SEMA4D IN SEMAPHORIN SIGNALING	Genes involved in Sema4D in semaphorin signaling
0.4	7.0	REACTOME CITRIC ACID CYCLE TCA CYCLE	Genes involved in Citric acid cycle (TCA cycle)
0.4	10.2	REACTOME BASIGIN INTERACTIONS	Genes involved in Basigin interactions
0.3	11.0	REACTOME TIGHT JUNCTION INTERACTIONS	Genes involved in Tight junction interactions
0.3	12.9	REACTOME NCAM1 INTERACTIONS	Genes involved in NCAM1 interactions
0.3	7.7	REACTOME FANCONI ANEMIA PATHWAY	Genes involved in Fanconi Anemia pathway
0.3	9.1	REACTOME THROMBIN SIGNALLING THROUGH PROTEINASE ACTIVATED RECEPTORS PARS	Genes involved in Thrombin signalling through proteinase activated receptors (PARs)
0.3	7.8	REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE	Genes involved in Amino acid transport across the plasma membrane
0.3	7.8	REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING	Genes involved in Negative regulators of RIG-I/MDA5 signaling
0.2	24.4	REACTOME PEPTIDE CHAIN ELONGATION	Genes involved in Peptide chain elongation
0.2	6.6	REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION	Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.2	4.1	REACTOME N GLYCAN ANTENNAE ELONGATION	Genes involved in N-Glycan antennae elongation
0.2	2.3	REACTOME UNWINDING OF DNA	Genes involved in Unwinding of DNA
0.2	5.9	REACTOME KINESINS	Genes involved in Kinesins
0.2	2.0	REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS	Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
0.2	26.8	REACTOME G ALPHA Q SIGNALLING EVENTS	Genes involved in G alpha (q) signalling events
0.2	8.0	REACTOME NUCLEAR SIGNALING BY ERBB4	Genes involved in Nuclear signaling by ERBB4
0.2	1.9	REACTOME PASSIVE TRANSPORT BY AQUAPORINS	Genes involved in Passive Transport by Aquaporins
0.1	1.7	REACTOME REGULATION OF COMPLEMENT CASCADE	Genes involved in Regulation of Complement cascade
0.1	1.2	REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS	Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins
0.1	5.6	REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G	Genes involved in Vif-mediated degradation of APOBEC3G
0.1	5.4	REACTOME UNFOLDED PROTEIN RESPONSE	Genes involved in Unfolded Protein Response
0.1	1.6	REACTOME METABOLISM OF POLYAMINES	Genes involved in Metabolism of polyamines
0.1	1.2	REACTOME KERATAN SULFATE DEGRADATION	Genes involved in Keratan sulfate degradation
0.1	0.8	REACTOME ALPHA LINOLENIC ACID ALA METABOLISM	Genes involved in alpha-linolenic acid (ALA) metabolism
0.1	6.9	REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2	Genes involved in Response to elevated platelet cytosolic Ca2+
0.1	1.7	REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS	Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers
0.1	2.3	REACTOME MRNA SPLICING MINOR PATHWAY	Genes involved in mRNA Splicing - Minor Pathway
0.1	1.1	REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS	Genes involved in ABCA transporters in lipid homeostasis
0.0	3.0	REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES	Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides
0.0	0.6	REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM	Genes involved in Branched-chain amino acid catabolism
0.0	0.1	REACTOME DESTABILIZATION OF MRNA BY BRF1	Genes involved in Destabilization of mRNA by Butyrate Response Factor 1 (BRF1)
0.0	0.2	REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS	Genes involved in Apoptotic cleavage of cell adhesion proteins
0.0	1.4	REACTOME MITOTIC PROMETAPHASE	Genes involved in Mitotic Prometaphase
0.0	1.2	REACTOME PPARA ACTIVATES GENE EXPRESSION	Genes involved in PPARA Activates Gene Expression
0.0	0.5	REACTOME STRIATED MUSCLE CONTRACTION	Genes involved in Striated Muscle Contraction