ISMARA results: Zfp784

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GSE53960: rat RNA-Seq transcriptomic Bodymap

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Results for Zfp784

Z-value: 1.01

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Transcription factors associated with Zfp784

Gene Symbol	Gene ID	Gene Info

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Zfp865	rn6_v1_chr1_+_72356880_72356880	0.52	1.4e-23	Click!

Activity profile of Zfp784 motif

Sorted Z-values of Zfp784 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr3_-_64554953 Show fit	25.99	ENSRNOT00000067452	LOC102553814 NCBI RGD Ensembl Show fit	serine/arginine repetitive matrix protein 1-like
chr5_+_49311030 Show fit	23.28	ENSRNOT00000010850	Cnr1 NCBI RGD Ensembl Show fit	cannabinoid receptor 1
chr20_-_31956649 Show fit	21.67	ENSRNOT00000072429	Hk1 NCBI RGD Ensembl Show fit	hexokinase 1
chr15_+_15275541 Show fit	20.50	ENSRNOT00000012153	Cadps NCBI RGD Ensembl Show fit	calcium dependent secretion activator
chr3_-_153893847 Show fit	18.23	ENSRNOT00000085938	LOC100911769 NCBI RGD Ensembl Show fit	band 4.1-like protein 1-like
chr7_+_142912316 Show fit	17.94	ENSRNOT00000010171	Nr4a1 NCBI RGD Ensembl Show fit	nuclear receptor subfamily 4, group A, member 1
chr7_-_113937941 Show fit	17.68	ENSRNOT00000012408	Kcnk9 NCBI RGD Ensembl Show fit	potassium two pore domain channel subfamily K member 9
chr16_-_20097287 Show fit	17.05	ENSRNOT00000025162	Unc13a NCBI RGD Ensembl Show fit	unc-13 homolog A
chr13_-_1946508 Show fit	16.93	ENSRNOT00000043890	Dsel NCBI RGD Ensembl Show fit	dermatan sulfate epimerase-like
chr2_-_200625434 Show fit	16.73	ENSRNOT00000079754	Hsd3b5 NCBI RGD Ensembl Show fit	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5

Showing 1 to 10 of 200 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of Zfp784

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
1.4	53.3	GO:0030866	cortical actin cytoskeleton organization(GO:0030866)
5.4	37.6	GO:0099525	presynaptic dense core granule exocytosis(GO:0099525)
2.0	31.7	GO:0042448	progesterone metabolic process(GO:0042448)
2.1	29.3	GO:0015671	oxygen transport(GO:0015671)
3.3	26.7	GO:0016199	axon midline choice point recognition(GO:0016199)
1.8	25.7	GO:0071294	cellular response to zinc ion(GO:0071294)
7.8	23.3	GO:0099553	trans-synaptic signaling by lipid, modulating synaptic transmission(GO:0099552) trans-synaptic signaling by endocannabinoid, modulating synaptic transmission(GO:0099553)
3.6	21.7	GO:0072656	maintenance of protein location in mitochondrion(GO:0072656)
3.0	17.9	GO:0043435	response to corticotropin-releasing hormone(GO:0043435) cellular response to corticotropin-releasing hormone stimulus(GO:0071376)
3.4	16.9	GO:0030205	dermatan sulfate metabolic process(GO:0030205)

Showing 1 to 10 of 129 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
4.0	44.5	GO:0005833	hemoglobin complex(GO:0005833)
0.1	38.6	GO:0019898	extrinsic component of membrane(GO:0019898)
0.4	37.3	GO:0042734	presynaptic membrane(GO:0042734)
0.1	36.9	GO:0031966	mitochondrial membrane(GO:0031966)
4.2	25.3	GO:0044326	dendritic spine neck(GO:0044326)
0.5	22.5	GO:0005834	heterotrimeric G-protein complex(GO:0005834)
1.3	20.5	GO:0031045	dense core granule(GO:0031045)
0.1	20.4	GO:0008021	synaptic vesicle(GO:0008021)
0.3	19.1	GO:0005881	cytoplasmic microtubule(GO:0005881)
2.1	17.1	GO:0044305	calyx of Held(GO:0044305) presynaptic active zone cytoplasmic component(GO:0098831)

Showing 1 to 10 of 75 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
5.3	31.7	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity(GO:0003854)
0.7	31.6	GO:0030507	spectrin binding(GO:0030507)
2.9	29.3	GO:0005344	oxygen transporter activity(GO:0005344)
1.0	23.8	GO:0030247	pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.3	23.7	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
5.8	23.3	GO:0004949	cannabinoid receptor activity(GO:0004949)
0.2	23.3	GO:0005200	structural constituent of cytoskeleton(GO:0005200)
3.6	21.7	GO:0019158	glucokinase activity(GO:0004340) hexokinase activity(GO:0004396) fructokinase activity(GO:0008865) mannokinase activity(GO:0019158)
1.1	18.4	GO:0070742	C2H2 zinc finger domain binding(GO:0070742)
0.7	17.9	GO:0035259	glucocorticoid receptor binding(GO:0035259)

Showing 1 to 10 of 109 entries

Gene overrepresentation in curated gene sets: canonical pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.3	53.6	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.8	38.5	PID NCADHERIN PATHWAY	N-cadherin signaling events
0.4	26.5	PID CASPASE PATHWAY	Caspase cascade in apoptosis
0.3	24.8	PID HIF1 TFPATHWAY	HIF-1-alpha transcription factor network
2.1	22.7	SA FAS SIGNALING	The TNF-type receptor Fas induces apoptosis on ligand binding.
0.4	17.9	PID NFAT 3PATHWAY	Role of Calcineurin-dependent NFAT signaling in lymphocytes
0.5	17.0	PID CD8 TCR DOWNSTREAM PATHWAY	Downstream signaling in naïve CD8+ T cells
0.3	15.6	PID PI3K PLC TRK PATHWAY	Trk receptor signaling mediated by PI3K and PLC-gamma
0.2	14.1	PID ERA GENOMIC PATHWAY	Validated nuclear estrogen receptor alpha network
0.1	11.1	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins

Showing 1 to 10 of 34 entries

Gene overrepresentation in curated gene sets: REACTOME pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
2.7	35.6	REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS	Genes involved in Tandem pore domain potassium channels
1.1	25.1	REACTOME SEMA3A PAK DEPENDENT AXON REPULSION	Genes involved in Sema3A PAK dependent Axon repulsion
0.9	22.5	REACTOME PROSTACYCLIN SIGNALLING THROUGH PROSTACYCLIN RECEPTOR	Genes involved in Prostacyclin signalling through prostacyclin receptor
0.4	21.7	REACTOME GLUCOSE TRANSPORT	Genes involved in Glucose transport
0.4	19.5	REACTOME SIGNALING BY ROBO RECEPTOR	Genes involved in Signaling by Robo receptor
0.2	18.9	REACTOME G ALPHA I SIGNALLING EVENTS	Genes involved in G alpha (i) signalling events
0.5	17.9	REACTOME PIP3 ACTIVATES AKT SIGNALING	Genes involved in PIP3 activates AKT signaling
0.2	17.9	REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION	Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.5	16.6	REACTOME SYNTHESIS OF PA	Genes involved in Synthesis of PA
0.5	15.6	REACTOME TRAFFICKING OF AMPA RECEPTORS	Genes involved in Trafficking of AMPA receptors

Showing 1 to 10 of 54 entries

Results for Zfp784

Z-value: 1.01

Motif logo

Transcription factors associated with Zfp784

Activity-expression correlation:

Activity profile of Zfp784 motif

Sorted Z-values of Zfp784 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of Zfp784

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: