Project
GSE53960: rat RNA-Seq transcriptomic Bodymap
Navigation
Downloads
Results for Zfp110
Z-value: 1.38
Motif logo
Transcription factors associated with Zfp110
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Zfp110 | rn6_v1_chr1_-_65756528_65756528 | 0.26 | 1.8e-06 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr7_-_15821927 Show fit | 105.13 |
ENSRNOT00000050658
|
similar to zinc finger protein 101 |
|
| chr1_-_62316450 Show fit | 83.97 |
ENSRNOT00000079171
|
|
|
| chr1_-_62558033 Show fit | 77.71 |
ENSRNOT00000015520
|
zinc finger protein 40 |
|
| chr1_-_87777359 Show fit | 62.09 |
ENSRNOT00000074090
|
|
|
| chr12_-_37185548 Show fit | 53.86 |
ENSRNOT00000001338
|
uncharacterized LOC102556092 |
|
| chr1_-_88558696 Show fit | 52.58 |
ENSRNOT00000038642
|
|
|
| chr7_-_15852930 Show fit | 52.10 |
ENSRNOT00000009270
|
similar to zinc finger protein 101 |
|
| chr14_+_6298872 Show fit | 46.76 |
ENSRNOT00000065071
|
zinc finger protein 442 |
|
| chr1_+_88542035 Show fit | 42.07 |
ENSRNOT00000032973
|
zinc finger protein 420 |
|
| chr4_+_170347410 Show fit | 35.84 |
ENSRNOT00000040508
|
LRRGT00139 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Zfp110
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 123.6 | GO:0006355 | regulation of transcription, DNA-templated(GO:0006355) |
| 1.2 | 35.8 | GO:0015985 | energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986) |
| 0.4 | 17.0 | GO:0051123 | RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123) |
| 1.1 | 13.8 | GO:0097113 | AMPA glutamate receptor clustering(GO:0097113) |
| 0.0 | 13.3 | GO:0050907 | detection of chemical stimulus involved in sensory perception(GO:0050907) detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
| 4.0 | 12.1 | GO:0035022 | positive regulation of Rac protein signal transduction(GO:0035022) |
| 0.7 | 9.8 | GO:0006654 | phosphatidic acid biosynthetic process(GO:0006654) |
| 0.0 | 9.6 | GO:0008380 | RNA splicing(GO:0008380) |
| 0.4 | 9.0 | GO:0015012 | heparan sulfate proteoglycan biosynthetic process(GO:0015012) |
| 0.2 | 8.9 | GO:0050873 | brown fat cell differentiation(GO:0050873) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 2.8 | 35.8 | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276) |
| 0.7 | 24.5 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
| 1.3 | 17.0 | GO:0000124 | SAGA complex(GO:0000124) |
| 0.4 | 13.8 | GO:0032281 | AMPA glutamate receptor complex(GO:0032281) |
| 0.0 | 9.2 | GO:0016607 | nuclear speck(GO:0016607) |
| 0.2 | 7.3 | GO:0043034 | costamere(GO:0043034) |
| 1.9 | 5.6 | GO:1990836 | lysosomal matrix(GO:1990836) |
| 0.6 | 4.6 | GO:0005658 | alpha DNA polymerase:primase complex(GO:0005658) |
| 0.5 | 2.3 | GO:0072558 | NLRP1 inflammasome complex(GO:0072558) |
| 0.0 | 0.9 | GO:0043220 | Schmidt-Lanterman incisure(GO:0043220) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 118.2 | GO:0001071 | nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700) |
| 1.8 | 35.8 | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism(GO:0046933) |
| 2.1 | 17.0 | GO:0001075 | transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly(GO:0001075) |
| 0.6 | 13.8 | GO:0043395 | heparan sulfate proteoglycan binding(GO:0043395) |
| 0.0 | 13.3 | GO:0004984 | olfactory receptor activity(GO:0004984) |
| 1.3 | 12.1 | GO:0019871 | sodium channel inhibitor activity(GO:0019871) |
| 0.8 | 9.8 | GO:0003841 | 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) |
| 0.1 | 8.9 | GO:0033613 | activating transcription factor binding(GO:0033613) |
| 1.5 | 7.3 | GO:0031802 | type 5 metabotropic glutamate receptor binding(GO:0031802) |
| 0.1 | 6.7 | GO:0004843 | thiol-dependent ubiquitin-specific protease activity(GO:0004843) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.5 | 12.1 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
| 0.1 | 5.6 | PID CMYB PATHWAY | C-MYB transcription factor network |
| 0.0 | 4.6 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
| 0.0 | 3.0 | PID E2F PATHWAY | E2F transcription factor network |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 48.3 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
| 0.7 | 12.1 | REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF CAMKII | Genes involved in CREB phosphorylation through the activation of CaMKII |
| 0.3 | 9.8 | REACTOME SYNTHESIS OF PA | Genes involved in Synthesis of PA |
| 0.2 | 9.6 | REACTOME MRNA 3 END PROCESSING | Genes involved in mRNA 3'-end processing |
| 0.2 | 9.0 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
| 0.3 | 6.0 | REACTOME PRE NOTCH PROCESSING IN GOLGI | Genes involved in Pre-NOTCH Processing in Golgi |
| 0.2 | 5.6 | REACTOME LYSOSOME VESICLE BIOGENESIS | Genes involved in Lysosome Vesicle Biogenesis |
| 0.3 | 4.6 | REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1 | Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1 |
| 0.0 | 4.6 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |