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GSE53960: rat RNA-Seq transcriptomic Bodymap

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Results for Zfp110

Z-value: 1.38

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Transcription factors associated with Zfp110

Gene Symbol Gene ID Gene Info
ENSRNOG00000031328 zinc finger protein 110

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Zfp110rn6_v1_chr1_-_65756528_657565280.261.8e-06Click!

Activity profile of Zfp110 motif

Sorted Z-values of Zfp110 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr7_-_15821927 105.13 ENSRNOT00000050658
similar to zinc finger protein 101
chr1_-_62316450 83.97 ENSRNOT00000079171

chr1_-_62558033 77.71 ENSRNOT00000015520
zinc finger protein 40
chr1_-_87777359 62.09 ENSRNOT00000074090

chr12_-_37185548 53.86 ENSRNOT00000001338
uncharacterized LOC102556092
chr1_-_88558696 52.58 ENSRNOT00000038642

chr7_-_15852930 52.10 ENSRNOT00000009270
similar to zinc finger protein 101
chr14_+_6298872 46.76 ENSRNOT00000065071
zinc finger protein 442
chr1_+_88542035 42.07 ENSRNOT00000032973
zinc finger protein 420
chr4_+_170347410 35.84 ENSRNOT00000040508
LRRGT00139
chr1_-_87777668 35.78 ENSRNOT00000037288

chr1_+_84758233 31.02 ENSRNOT00000072734

chr5_-_164648328 30.10 ENSRNOT00000090811
zinc finger protein 933
chr1_-_62191818 27.02 ENSRNOT00000033187

chr7_-_9976367 24.97 ENSRNOT00000044241
zinc finger protein 347
chr7_+_15279611 23.69 ENSRNOT00000043826
zinc finger protein 952
chr1_-_62114672 23.27 ENSRNOT00000072607

chr1_-_88558387 22.30 ENSRNOT00000074174

chr7_-_10588202 22.01 ENSRNOT00000086920

chr1_+_84652632 21.88 ENSRNOT00000041861

chrX_-_77295426 16.97 ENSRNOT00000090833
TATA-box binding protein associated factor 9b
chr1_+_61374379 15.76 ENSRNOT00000015343
zinc finger protein 53
chr8_+_131965134 15.00 ENSRNOT00000078308
zinc finger protein 660
chr4_+_110699557 13.76 ENSRNOT00000030588
ENSRNOT00000092261
leucine rich repeat transmembrane neuronal 4
chr20_+_1749716 12.65 ENSRNOT00000048856
olfactory receptor 1735
chr20_+_1764794 12.11 ENSRNOT00000075084
olfactory receptor 1736
chr2_+_230901126 12.07 ENSRNOT00000016026
ENSRNOT00000015564
ENSRNOT00000068198
calcium/calmodulin-dependent protein kinase II delta
chr1_-_282492912 11.97 ENSRNOT00000047883

chr1_+_88451958 11.74 ENSRNOT00000074301
zinc finger protein 260-like
chr1_+_80973739 10.76 ENSRNOT00000026088
ENSRNOT00000081983

chr20_+_4369178 9.78 ENSRNOT00000088079
1-acylglycerol-3-phosphate O-acyltransferase 1
chr2_-_264864265 9.60 ENSRNOT00000044236
serine and arginine rich splicing factor 11
chr15_-_48445588 8.99 ENSRNOT00000077197
ENSRNOT00000018583
exostosin-like glycosyltransferase 3
chr18_+_79813759 8.86 ENSRNOT00000021768
zinc finger protein 516
chrX_+_43535737 8.52 ENSRNOT00000087073
E3 ubiquitin-protein ligase RNF168-like
chr16_-_21473808 8.34 ENSRNOT00000066776
zinc finger protein 964
chr9_+_50892605 8.23 ENSRNOT00000033133
basic, immunoglobulin-like variable motif containing
chr2_+_264864351 7.77 ENSRNOT00000015434
leucine rich repeat containing 40
chr2_+_22950018 7.30 ENSRNOT00000071804
homer scaffolding protein 1
chr5_-_113939127 6.66 ENSRNOT00000039554
myb-like, SWIRM and MPN domains 1
chr5_+_153197459 6.47 ENSRNOT00000023187
Rh blood group, D antigen
chr6_+_29977797 6.46 ENSRNOT00000071784
FK506 binding protein 1B
chr20_+_1781320 6.37 ENSRNOT00000040388
olfactory receptor 1737
chr10_+_59533480 5.99 ENSRNOT00000087723
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
chr4_-_173640684 5.73 ENSRNOT00000010728
RERG like
chr1_+_67340809 5.70 ENSRNOT00000045266
mCG114696-like
chr5_-_99033107 5.55 ENSRNOT00000041306
heat shock protein family A (Hsp70) member 8
chr1_+_69841998 5.23 ENSRNOT00000072231
zinc finger protein 773, pseudogene 1
chr1_-_61872975 4.77 ENSRNOT00000078809

chrX_-_62698830 4.64 ENSRNOT00000076359
DNA polymerase alpha 1, catalytic subunit
chr4_+_49369296 4.58 ENSRNOT00000007822
wingless-type MMTV integration site family, member 16
chr14_+_41388563 4.18 ENSRNOT00000048329
similar to Ac1591
chr8_+_64531594 4.14 ENSRNOT00000036798
GRAM domain containing 2
chr19_-_36157924 3.63 ENSRNOT00000072022

chr18_-_76653056 3.53 ENSRNOT00000078496
ADNP homeobox 2
chr17_+_36690249 3.26 ENSRNOT00000089476
ENSRNOT00000082140
similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a)
chr1_+_150130084 3.21 ENSRNOT00000041243
olfactory receptor 25
chr12_-_2661565 2.80 ENSRNOT00000064859
CD209f antigen
chr10_-_57739109 2.34 ENSRNOT00000082171
NLR family, pyrin domain containing 1A
chr13_+_99004942 2.13 ENSRNOT00000085390
acyl-CoA binding domain containing 3
chr10_+_29606748 1.78 ENSRNOT00000080720

chr16_-_83278119 1.62 ENSRNOT00000019454
inhibitor of growth family, member 1
chr12_-_11157583 1.58 ENSRNOT00000082535
zinc finger with KRAB and SCAN domains 5
chr4_+_166986350 1.46 ENSRNOT00000040828
taste receptor, type 2, member 117
chr1_+_60248695 1.36 ENSRNOT00000079558
vomeronasal 1 receptor 9
chr1_-_199061107 1.27 ENSRNOT00000085954
zinc finger protein 689
chr16_-_19583386 1.25 ENSRNOT00000090131
zinc finger protein 617
chr7_-_18180705 1.05 ENSRNOT00000065954
zinc finger protein 494
chr5_-_99566317 0.93 ENSRNOT00000051028
ENSRNOT00000089235
multiple PDZ domain crumbs cell polarity complex component
chr3_-_105663457 0.42 ENSRNOT00000067646
zinc finger protein 770
chr7_-_120518653 0.41 ENSRNOT00000016362
BAI1-associated protein 2-like 2
chr17_-_18634258 0.30 ENSRNOT00000082307
zinc finger protein 709-like

Network of associatons between targets according to the STRING database.

First level regulatory network of Zfp110

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
4.0 12.1 GO:0035022 positive regulation of Rac protein signal transduction(GO:0035022)
1.9 5.6 GO:0097214 protein targeting to lysosome involved in chaperone-mediated autophagy(GO:0061740) regulation of lysosomal membrane permeability(GO:0097213) positive regulation of lysosomal membrane permeability(GO:0097214)
1.7 6.7 GO:0035521 monoubiquitinated histone deubiquitination(GO:0035521) monoubiquitinated histone H2A deubiquitination(GO:0035522)
1.2 35.8 GO:0015985 energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
1.2 4.6 GO:0006272 leading strand elongation(GO:0006272)
1.1 13.8 GO:0097113 AMPA glutamate receptor clustering(GO:0097113)
0.9 6.5 GO:0060315 negative regulation of ryanodine-sensitive calcium-release channel activity(GO:0060315)
0.7 9.8 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.7 4.6 GO:0090403 oxidative stress-induced premature senescence(GO:0090403)
0.5 7.3 GO:2001256 regulation of store-operated calcium entry(GO:2001256)
0.4 6.5 GO:0060586 multicellular organismal iron ion homeostasis(GO:0060586)
0.4 17.0 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.4 9.0 GO:0015012 heparan sulfate proteoglycan biosynthetic process(GO:0015012)
0.2 8.9 GO:0050873 brown fat cell differentiation(GO:0050873)
0.1 2.3 GO:0032495 response to muramyl dipeptide(GO:0032495)
0.1 3.3 GO:0032392 DNA geometric change(GO:0032392)
0.0 3.5 GO:0071300 cellular response to retinoic acid(GO:0071300)
0.0 0.4 GO:2000251 positive regulation of actin cytoskeleton reorganization(GO:2000251)
0.0 123.6 GO:0006355 regulation of transcription, DNA-templated(GO:0006355)
0.0 9.6 GO:0008380 RNA splicing(GO:0008380)
0.0 2.1 GO:0006694 steroid biosynthetic process(GO:0006694)
0.0 1.5 GO:0050909 sensory perception of taste(GO:0050909)
0.0 4.4 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 13.3 GO:0050907 detection of chemical stimulus involved in sensory perception(GO:0050907) detection of chemical stimulus involved in sensory perception of smell(GO:0050911)
0.0 1.4 GO:0007606 sensory perception of chemical stimulus(GO:0007606)
0.0 0.9 GO:0042552 myelination(GO:0042552)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
2.8 35.8 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
1.9 5.6 GO:1990836 lysosomal matrix(GO:1990836)
1.3 17.0 GO:0000124 SAGA complex(GO:0000124)
0.7 24.5 GO:0033017 sarcoplasmic reticulum membrane(GO:0033017)
0.6 4.6 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.5 2.3 GO:0072558 NLRP1 inflammasome complex(GO:0072558)
0.4 13.8 GO:0032281 AMPA glutamate receptor complex(GO:0032281)
0.2 7.3 GO:0043034 costamere(GO:0043034)
0.0 0.9 GO:0043220 Schmidt-Lanterman incisure(GO:0043220)
0.0 0.4 GO:0071439 clathrin complex(GO:0071439)
0.0 9.2 GO:0016607 nuclear speck(GO:0016607)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.1 17.0 GO:0001075 transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly(GO:0001075)
1.8 35.8 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
1.5 7.3 GO:0031802 type 5 metabotropic glutamate receptor binding(GO:0031802)
1.4 5.6 GO:0031686 A1 adenosine receptor binding(GO:0031686)
1.3 12.1 GO:0019871 sodium channel inhibitor activity(GO:0019871)
0.8 9.8 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841)
0.7 4.6 GO:0003896 DNA primase activity(GO:0003896)
0.6 6.5 GO:0019855 calcium channel inhibitor activity(GO:0019855)
0.6 13.8 GO:0043395 heparan sulfate proteoglycan binding(GO:0043395)
0.3 6.0 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.2 6.5 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.2 3.3 GO:0000400 four-way junction DNA binding(GO:0000400)
0.1 4.6 GO:0005109 frizzled binding(GO:0005109)
0.1 8.9 GO:0033613 activating transcription factor binding(GO:0033613)
0.1 118.2 GO:0001071 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.1 2.1 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237)
0.1 6.7 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843)
0.0 2.3 GO:0097110 scaffold protein binding(GO:0097110)
0.0 1.6 GO:0035064 methylated histone binding(GO:0035064)
0.0 5.7 GO:0003924 GTPase activity(GO:0003924)
0.0 1.4 GO:0016503 pheromone receptor activity(GO:0016503)
0.0 13.3 GO:0004984 olfactory receptor activity(GO:0004984)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 12.1 ST WNT CA2 CYCLIC GMP PATHWAY Wnt/Ca2+/cyclic GMP signaling.
0.1 5.6 PID CMYB PATHWAY C-MYB transcription factor network
0.0 4.6 WNT SIGNALING Genes related to Wnt-mediated signal transduction
0.0 3.0 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 12.1 REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF CAMKII Genes involved in CREB phosphorylation through the activation of CaMKII
0.3 6.0 REACTOME PRE NOTCH PROCESSING IN GOLGI Genes involved in Pre-NOTCH Processing in Golgi
0.3 9.8 REACTOME SYNTHESIS OF PA Genes involved in Synthesis of PA
0.3 4.6 REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1 Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1
0.3 48.3 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.2 5.6 REACTOME LYSOSOME VESICLE BIOGENESIS Genes involved in Lysosome Vesicle Biogenesis
0.2 9.6 REACTOME MRNA 3 END PROCESSING Genes involved in mRNA 3'-end processing
0.2 9.0 REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S Genes involved in Activation of Chaperone Genes by XBP1(S)
0.0 4.6 REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS Genes involved in Class B/2 (Secretin family receptors)