GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Myod1 Links NCBI RGD Ensembl	ENSRNOG00000011306	myogenic differentiation 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Myod1	rn6_v1_chr1_+_102396538_102396538	0.65	2.5e-39	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_+_80321585 Show fit	128.20	ENSRNOT00000022895	Ckm Links NCBI RGD Ensembl Show fit	creatine kinase, M-type
chr3_-_72219246 Show fit	121.12	ENSRNOT00000009903	Smtnl1 Links NCBI RGD Ensembl Show fit	smoothelin-like 1
chr1_+_198655742 Show fit	108.42	ENSRNOT00000023944	Mylpf Links NCBI RGD Ensembl Show fit	myosin light chain, phosphorylatable, fast skeletal muscle
chr1_+_215609036 Show fit	100.95	ENSRNOT00000076187	Tnni2 Links NCBI RGD Ensembl Show fit	troponin I2, fast skeletal type
chr5_-_59025631 Show fit	97.23	ENSRNOT00000049000 ENSRNOT00000022801	Tpm2 Links NCBI RGD Ensembl Show fit	tropomyosin 2, beta
chr3_+_148386189 Show fit	96.11	ENSRNOT00000011255	Mylk2 Links NCBI RGD Ensembl Show fit	myosin light chain kinase 2
chr10_+_70262361 Show fit	95.64	ENSRNOT00000064625 ENSRNOT00000076973	Unc45b Links NCBI RGD Ensembl Show fit	unc-45 myosin chaperone B
chr1_-_80331626 Show fit	89.65	ENSRNOT00000022577	AABR07002677.1 Links NCBI RGD Ensembl Show fit
chr15_+_34251606 Show fit	86.39	ENSRNOT00000025725	Fitm1 Links NCBI RGD Ensembl Show fit	fat storage-inducing transmembrane protein 1
chr8_+_130416355 Show fit	81.92	ENSRNOT00000026234	Klhl40 Links NCBI RGD Ensembl Show fit	kelch-like family member 40
chr9_+_14529218 Show fit	81.38	ENSRNOT00000016893	Apobec2 Links NCBI RGD Ensembl Show fit	apolipoprotein B mRNA editing enzyme catalytic subunit 2
chr9_+_82556573 Show fit	77.64	ENSRNOT00000026860	Des Links NCBI RGD Ensembl Show fit	desmin
chr10_-_94557764 Show fit	72.34	ENSRNOT00000016841	Scn4a Links NCBI RGD Ensembl Show fit	sodium voltage-gated channel alpha subunit 4
chr1_+_215609645 Show fit	71.90	ENSRNOT00000076140 ENSRNOT00000027487	Tnni2 Links NCBI RGD Ensembl Show fit	troponin I2, fast skeletal type
chr4_-_129619142 Show fit	71.12	ENSRNOT00000047453	Lmod3 Links NCBI RGD Ensembl Show fit	leiomodin 3
chrX_-_111942749 Show fit	70.55	ENSRNOT00000087583	AABR07040840.1 Links NCBI RGD Ensembl Show fit
chr10_-_95934345 Show fit	69.34	ENSRNOT00000004349	Cacng1 Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel auxiliary subunit gamma 1
chr13_+_52889737 Show fit	60.80	ENSRNOT00000074366	Cacna1s Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 S
chr16_-_40025401 Show fit	58.58	ENSRNOT00000066639	Asb5 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box-containing 5
chr1_-_213650247 Show fit	56.58	ENSRNOT00000019679	Cox8b Links NCBI RGD Ensembl Show fit	cytochrome c oxidase, subunit VIIIb
chr15_+_2526368 Show fit	52.60	ENSRNOT00000048713 ENSRNOT00000074803	Dusp13 Links NCBI RGD Ensembl Show fit Dusp13 Links NCBI RGD Ensembl Show fit	dual specificity phosphatase 13 dual specificity phosphatase 13
chr10_-_109729019 Show fit	51.00	ENSRNOT00000054959	Ppp1r27 Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 27
chr9_-_115850634 Show fit	48.87	ENSRNOT00000049720	Lrrc30 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 30
chr2_-_219842986 Show fit	47.79	ENSRNOT00000055735	Agl Links NCBI RGD Ensembl Show fit	amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
chr9_+_94286550 Show fit	45.43	ENSRNOT00000026504	Chrnd Links NCBI RGD Ensembl Show fit	cholinergic receptor nicotinic delta subunit
chr7_+_11383116 Show fit	40.41	ENSRNOT00000066348	Nmrk2 Links NCBI RGD Ensembl Show fit	nicotinamide riboside kinase 2
chr1_+_266952561 Show fit	39.99	ENSRNOT00000076452	Neurl1 Links NCBI RGD Ensembl Show fit	neuralized E3 ubiquitin protein ligase 1
chr20_-_5754773 Show fit	37.41	ENSRNOT00000035977	Ip6k3 Links NCBI RGD Ensembl Show fit	inositol hexakisphosphate kinase 3
chr2_+_11658568 Show fit	35.41	ENSRNOT00000076408 ENSRNOT00000076416 ENSRNOT00000076992 ENSRNOT00000075931 ENSRNOT00000076136 ENSRNOT00000076481 ENSRNOT00000076084 ENSRNOT00000076230 ENSRNOT00000076710 ENSRNOT00000076239	Mef2c Links NCBI RGD Ensembl Show fit	myocyte enhancer factor 2C
chr1_-_264975132 Show fit	34.98	ENSRNOT00000021748	Lbx1 Links NCBI RGD Ensembl Show fit	ladybird homeobox 1
chr6_-_99783047 Show fit	34.30	ENSRNOT00000009028	Sptb Links NCBI RGD Ensembl Show fit	spectrin, beta, erythrocytic
chr10_+_92628356 Show fit	32.82	ENSRNOT00000072480	Myl4 Links NCBI RGD Ensembl Show fit	myosin, light chain 4
chr8_-_33017854 Show fit	31.46	ENSRNOT00000011386	Barx2 Links NCBI RGD Ensembl Show fit	BARX homeobox 2
chr15_+_4240203 Show fit	29.89	ENSRNOT00000010178	Mss51 Links NCBI RGD Ensembl Show fit	MSS51 mitochondrial translational activator
chr3_+_79860179 Show fit	29.80	ENSRNOT00000081160 ENSRNOT00000068444	Rapsn Links NCBI RGD Ensembl Show fit	receptor-associated protein of the synapse
chr2_+_189423559 Show fit	29.37	ENSRNOT00000029076	Tpm3 Links NCBI RGD Ensembl Show fit	tropomyosin 3
chr10_-_8654892 Show fit	27.93	ENSRNOT00000066534	Rbfox1 Links NCBI RGD Ensembl Show fit	RNA binding protein, fox-1 homolog 1
chr4_-_99125111 Show fit	26.38	ENSRNOT00000009184	Smyd1 Links NCBI RGD Ensembl Show fit	SET and MYND domain containing 1
chr10_+_34185898 Show fit	25.69	ENSRNOT00000003339	Trim7 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 7
chr10_-_89338739 Show fit	25.60	ENSRNOT00000073923	Ptges3l Links NCBI RGD Ensembl Show fit	prostaglandin E synthase 3 like
chr5_+_61657507 Show fit	24.79	ENSRNOT00000013228	Tmod1 Links NCBI RGD Ensembl Show fit	tropomodulin 1
chr10_-_62699723 Show fit	24.70	ENSRNOT00000086706	Coro6 Links NCBI RGD Ensembl Show fit	coronin 6
chr8_+_65733400 Show fit	24.26	ENSRNOT00000089126	Uaca Links NCBI RGD Ensembl Show fit	uveal autoantigen with coiled-coil domains and ankyrin repeats
chr3_-_117766120 Show fit	23.19	ENSRNOT00000056022	Fbn1 Links NCBI RGD Ensembl Show fit	fibrillin 1
chr16_+_6962722 Show fit	23.14	ENSRNOT00000023330	Mustn1 Links NCBI RGD Ensembl Show fit	musculoskeletal, embryonic nuclear protein 1
chr1_-_215846911 Show fit	22.48	ENSRNOT00000089171	Igf2 Links NCBI RGD Ensembl Show fit	insulin-like growth factor 2
chr7_-_98098268 Show fit	21.55	ENSRNOT00000010361	Fbxo32 Links NCBI RGD Ensembl Show fit	F-box protein 32
chr10_-_57243435 Show fit	21.40	ENSRNOT00000005050	Chrne Links NCBI RGD Ensembl Show fit	cholinergic receptor nicotinic epsilon subunit
chr10_+_106812739 Show fit	21.24	ENSRNOT00000074225	Syngr2 Links NCBI RGD Ensembl Show fit	synaptogyrin 2
chr19_-_37427989 Show fit	21.07	ENSRNOT00000022863	Tppp3 Links NCBI RGD Ensembl Show fit	tubulin polymerization-promoting protein family member 3
chr4_+_57952982 Show fit	19.95	ENSRNOT00000014465	Cpa1 Links NCBI RGD Ensembl Show fit	carboxypeptidase A1
chr11_+_27208564 Show fit	19.78	ENSRNOT00000002158	Map3k7cl Links NCBI RGD Ensembl Show fit	MAP3K7 C-terminal like
chr1_-_31055453 Show fit	19.41	ENSRNOT00000031083	Soga3 Links NCBI RGD Ensembl Show fit	SOGA family member 3
chr1_-_128695995 Show fit	19.12	ENSRNOT00000077020	Synm Links NCBI RGD Ensembl Show fit	synemin
chr3_-_110556808 Show fit	19.11	ENSRNOT00000092158 ENSRNOT00000045362	RGD1565536 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein
chr8_+_32018560 Show fit	18.56	ENSRNOT00000007358	Adamts8 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase with thrombospondin type 1 motif, 8
chr19_+_52032886 Show fit	16.37	ENSRNOT00000019923	Mlycd Links NCBI RGD Ensembl Show fit	malonyl-CoA decarboxylase
chr8_-_87419564 Show fit	15.77	ENSRNOT00000015365	Filip1 Links NCBI RGD Ensembl Show fit	filamin A interacting protein 1
chr5_+_28850950 Show fit	15.39	ENSRNOT00000009759	Tmem64 Links NCBI RGD Ensembl Show fit	transmembrane protein 64
chr5_+_75392790 Show fit	15.12	ENSRNOT00000048457	Musk Links NCBI RGD Ensembl Show fit	muscle associated receptor tyrosine kinase
chr7_+_120153184 Show fit	15.03	ENSRNOT00000013538	Lgals1 Links NCBI RGD Ensembl Show fit	galectin 1
chr13_+_83681322 Show fit	15.00	ENSRNOT00000004206	Mpc2 Links NCBI RGD Ensembl Show fit	mitochondrial pyruvate carrier 2
chr1_+_101884276 Show fit	14.88	ENSRNOT00000082917	Tmem143 Links NCBI RGD Ensembl Show fit	transmembrane protein 143
chr3_-_5617225 Show fit	14.25	ENSRNOT00000008327	Tmem8c Links NCBI RGD Ensembl Show fit	transmembrane protein 8C
chr9_-_82419288 Show fit	14.09	ENSRNOT00000004797	Tuba4a Links NCBI RGD Ensembl Show fit	tubulin, alpha 4A
chr3_-_94418711 Show fit	13.82	ENSRNOT00000089554	Hipk3 Links NCBI RGD Ensembl Show fit	homeodomain interacting protein kinase 3
chr5_+_147476221 Show fit	13.68	ENSRNOT00000010730	Sync Links NCBI RGD Ensembl Show fit	syncoilin, intermediate filament protein
chr4_-_60358562 Show fit	13.49	ENSRNOT00000018001	Chchd3 Links NCBI RGD Ensembl Show fit	coiled-coil-helix-coiled-coil-helix domain containing 3
chr3_-_123723524 Show fit	12.99	ENSRNOT00000080351	Cenpb Links NCBI RGD Ensembl Show fit	centromere protein B
chr2_-_210782746 Show fit	12.62	ENSRNOT00000025939 ENSRNOT00000081501	Gstm7 Links NCBI RGD Ensembl Show fit	glutathione S-transferase, mu 7
chr10_+_59173268 Show fit	12.55	ENSRNOT00000013486	Ube2g1 Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2G 1
chr10_-_87517199 Show fit	11.49	ENSRNOT00000080171	LOC100365588 Links NCBI RGD Ensembl Show fit	keratin associated protein 1-3-like
chr10_+_83231409 Show fit	11.44	ENSRNOT00000006230	Spop Links NCBI RGD Ensembl Show fit	speckle type BTB/POZ protein
chr20_-_45259928 Show fit	11.33	ENSRNOT00000087226	Slc16a10 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 10
chr10_+_83231238 Show fit	11.03	ENSRNOT00000077625	Spop Links NCBI RGD Ensembl Show fit	speckle type BTB/POZ protein
chr1_+_72420352 Show fit	10.92	ENSRNOT00000066307	Sbk3 Links NCBI RGD Ensembl Show fit	SH3 domain binding kinase family, member 3
chr1_+_100891866 Show fit	10.55	ENSRNOT00000086890 ENSRNOT00000083336	Fuz Links NCBI RGD Ensembl Show fit	fuzzy planar cell polarity protein
chr10_+_36098051 Show fit	10.33	ENSRNOT00000083971	Adamts2 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase with thrombospondin type 1 motif, 2
chr5_+_3955227 Show fit	10.16	ENSRNOT00000009908	Msc Links NCBI RGD Ensembl Show fit	musculin
chr1_-_80716143 Show fit	10.14	ENSRNOT00000092048 ENSRNOT00000025829	Cblc Links NCBI RGD Ensembl Show fit	Cbl proto-oncogene C
chr1_+_220446425 Show fit	10.07	ENSRNOT00000027339	LOC100911932 Links NCBI RGD Ensembl Show fit	endosialin-like
chr6_-_122721496 Show fit	9.87	ENSRNOT00000079697	Ptpn21 Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, non-receptor type 21
chrX_-_111191932 Show fit	9.84	ENSRNOT00000088050 ENSRNOT00000083613	Morc4 Links NCBI RGD Ensembl Show fit	MORC family CW-type zinc finger 4
chr5_-_144274981 Show fit	9.26	ENSRNOT00000065871	Map7d1 Links NCBI RGD Ensembl Show fit	MAP7 domain containing 1
chr1_-_265298797 Show fit	9.02	ENSRNOT00000023137	Poll Links NCBI RGD Ensembl Show fit	DNA polymerase lambda
chr10_+_87788458 Show fit	8.94	ENSRNOT00000042020	LOC100910814 Links NCBI RGD Ensembl Show fit	keratin-associated protein 9-1-like
chr1_+_220353356 Show fit	8.87	ENSRNOT00000080189	Cd248 Links NCBI RGD Ensembl Show fit	CD248 molecule
chr1_+_167374182 Show fit	8.79	ENSRNOT00000092882	Stim1 Links NCBI RGD Ensembl Show fit	stromal interaction molecule 1
chrX_+_136466779 Show fit	8.69	ENSRNOT00000093268 ENSRNOT00000068717	Arhgap36 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 36
chr10_-_87510629 Show fit	8.68	ENSRNOT00000084197	Krtap1-3 Links NCBI RGD Ensembl Show fit	keratin associated protein 1-3
chr1_+_85213652 Show fit	8.48	ENSRNOT00000092044	Nccrp1 Links NCBI RGD Ensembl Show fit	non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
chr10_-_87578854 Show fit	8.35	ENSRNOT00000065619	LOC680160 Links NCBI RGD Ensembl Show fit	similar to keratin associated protein 4-7
chr7_+_2504695 Show fit	7.91	ENSRNOT00000003965	Atp5b Links NCBI RGD Ensembl Show fit	ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
chr6_-_72462657 Show fit	7.90	ENSRNOT00000088720 ENSRNOT00000077578	Strn3 Links NCBI RGD Ensembl Show fit	striatin 3
chr10_-_87564327 Show fit	7.83	ENSRNOT00000064760 ENSRNOT00000068237	LOC680160 Links NCBI RGD Ensembl Show fit	similar to keratin associated protein 4-7
chr9_-_82382272 Show fit	7.82	ENSRNOT00000025627	Abcb6 Links NCBI RGD Ensembl Show fit	ATP-binding cassette, subfamily B (MDR/TAP), member 6
chr11_-_80826505 Show fit	7.72	ENSRNOT00000032383	Rtp1 Links NCBI RGD Ensembl Show fit	receptor (chemosensory) transporter protein 1
chr2_+_54466280 Show fit	7.71	ENSRNOT00000033112	C6 Links NCBI RGD Ensembl Show fit	complement C6
chr5_-_151536518 Show fit	7.39	ENSRNOT00000011311	Wdtc1 Links NCBI RGD Ensembl Show fit	WD and tetratricopeptide repeats 1
chr5_+_48313599 Show fit	7.36	ENSRNOT00000081825	Gabrr2 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor rho 2 subunit
chr3_-_2456041 Show fit	7.17	ENSRNOT00000062001	Rnf224 Links NCBI RGD Ensembl Show fit	ring finger protein 224
chr11_-_83926524 Show fit	7.10	ENSRNOT00000041777 ENSRNOT00000040029	Eif4g1 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4 gamma, 1
chr4_-_147893992 Show fit	6.93	ENSRNOT00000032158	Plxnd1 Links NCBI RGD Ensembl Show fit	plexin D1
chr7_-_139223116 Show fit	6.89	ENSRNOT00000086559	Endou Links NCBI RGD Ensembl Show fit	endonuclease, poly(U)-specific
chr1_+_199287895 Show fit	6.76	ENSRNOT00000026224	Stx4 Links NCBI RGD Ensembl Show fit	syntaxin 4
chr7_-_71226150 Show fit	6.76	ENSRNOT00000005875	RGD1561812 Links NCBI RGD Ensembl Show fit	similar to Retinol dehydrogenase type II (RODH II) (29 k-protein)
chr8_-_108109801 Show fit	6.73	ENSRNOT00000034277	Sox14 Links NCBI RGD Ensembl Show fit	SRY box 14
chr6_+_127207732 Show fit	6.73	ENSRNOT00000071976	RGD1309028 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA A830059I20
chr8_-_120446455 Show fit	6.58	ENSRNOT00000085161 ENSRNOT00000042854 ENSRNOT00000037199	Arpp21 Links NCBI RGD Ensembl Show fit	cAMP regulated phosphoprotein 21
chr1_+_218487824 Show fit	6.39	ENSRNOT00000017958	Mrgprd Links NCBI RGD Ensembl Show fit	MAS related GPR family member D
chr15_-_8931983 Show fit	6.28	ENSRNOT00000085322	Thrb Links NCBI RGD Ensembl Show fit	thyroid hormone receptor beta
chr10_-_87753668 Show fit	6.15	ENSRNOT00000066758 ENSRNOT00000047104	Krtap4-3 Links NCBI RGD Ensembl Show fit	keratin associated protein 4-3
chr4_-_132111079 Show fit	6.01	ENSRNOT00000013719	Eif4e3 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4E family member 3
chr20_+_22728208 Show fit	5.93	ENSRNOT00000000794	LOC100363472 Links NCBI RGD Ensembl Show fit	nuclear receptor-binding factor 2-like
chr1_-_88690534 Show fit	5.90	ENSRNOT00000072570	Ovol3 Links NCBI RGD Ensembl Show fit	ovo-like zinc finger 3
chr5_-_113578928 Show fit	5.88	ENSRNOT00000010621	Plaa Links NCBI RGD Ensembl Show fit	phospholipase A2, activating protein
chr7_-_97977135 Show fit	5.86	ENSRNOT00000008785	Wdyhv1 Links NCBI RGD Ensembl Show fit	WDYHV motif containing 1
chr18_-_59819113 Show fit	5.62	ENSRNOT00000065939	RGD1562699 Links NCBI RGD Ensembl Show fit	RGD1562699
chr1_+_219345918 Show fit	5.49	ENSRNOT00000025018	Cdk2ap2 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase 2 associated protein 2
chr19_+_22699808 Show fit	5.40	ENSRNOT00000023169	RGD1308706 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 4921524J17
chr3_-_72171078 Show fit	5.27	ENSRNOT00000009817	Serping1 Links NCBI RGD Ensembl Show fit	serpin family G member 1
chr13_-_73704678 Show fit	5.15	ENSRNOT00000005280	Tor1aip1 Links NCBI RGD Ensembl Show fit	torsin 1A interacting protein 1
chr5_-_159371313 Show fit	5.09	ENSRNOT00000009921	Padi1 Links NCBI RGD Ensembl Show fit	peptidyl arginine deiminase 1
chr3_-_60460724 Show fit	5.04	ENSRNOT00000024706	Chrna1 Links NCBI RGD Ensembl Show fit	cholinergic receptor nicotinic alpha 1 subunit
chr1_+_199287710 Show fit	5.04	ENSRNOT00000082121	Stx4 Links NCBI RGD Ensembl Show fit	syntaxin 4
chr13_-_73704480 Show fit	4.86	ENSRNOT00000005296	Tor1aip1 Links NCBI RGD Ensembl Show fit	torsin 1A interacting protein 1
chr2_+_148608056 Show fit	4.84	ENSRNOT00000015119	Tsc22d2 Links NCBI RGD Ensembl Show fit	TSC22 domain family, member 2
chr10_+_87832743 Show fit	4.78	ENSRNOT00000055286	Krtap31-1 Links NCBI RGD Ensembl Show fit	keratin associated protein 31-1
chr17_-_13393243 Show fit	4.32	ENSRNOT00000018252	Gadd45g Links NCBI RGD Ensembl Show fit	growth arrest and DNA-damage-inducible, gamma
chr10_+_11393103 Show fit	4.10	ENSRNOT00000076022	Adcy9 Links NCBI RGD Ensembl Show fit	adenylate cyclase 9
chr2_+_148722231 Show fit	4.07	ENSRNOT00000018022	Eif2a Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2A
chr10_-_87510360 Show fit	3.88	ENSRNOT00000077126	Krtap1-3 Links NCBI RGD Ensembl Show fit	keratin associated protein 1-3
chr5_+_116963609 Show fit	3.82	ENSRNOT00000072724 ENSRNOT00000073487	AABR07049320.1 Links NCBI RGD Ensembl Show fit
chr19_-_55510460 Show fit	3.72	ENSRNOT00000019820	Cbfa2t3 Links NCBI RGD Ensembl Show fit	CBFA2/RUNX1 translocation partner 3
chr9_+_76440186 Show fit	3.72	ENSRNOT00000049479	RGD1562431 Links NCBI RGD Ensembl Show fit	similar to chromosome 20 open reading frame 81
chr10_+_90731865 Show fit	3.69	ENSRNOT00000064429	Adam11 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 11
chr13_+_89718066 Show fit	3.52	ENSRNOT00000005147	Dedd Links NCBI RGD Ensembl Show fit	death effector domain-containing
chr8_-_122987191 Show fit	3.41	ENSRNOT00000033976	Gpd1l Links NCBI RGD Ensembl Show fit	glycerol-3-phosphate dehydrogenase 1-like
chr20_-_11546046 Show fit	3.38	ENSRNOT00000068374	LOC690386 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC690386
chr1_+_171188133 Show fit	3.35	ENSRNOT00000026511	Olr231 Links NCBI RGD Ensembl Show fit	olfactory receptor 231
chr2_+_118746333 Show fit	3.27	ENSRNOT00000079431	AABR07009965.1 Links NCBI RGD Ensembl Show fit
chr19_-_55300403 Show fit	3.17	ENSRNOT00000018591	Rnf166 Links NCBI RGD Ensembl Show fit	ring finger protein 166
chr8_-_116469915 Show fit	3.14	ENSRNOT00000024193	Sema3f Links NCBI RGD Ensembl Show fit	semaphorin 3F
chr16_+_20873642 Show fit	3.06	ENSRNOT00000004891	Ddx49 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 49
chr3_+_110508403 Show fit	3.03	ENSRNOT00000079959	AABR07053500.2 Links NCBI RGD Ensembl Show fit
chr10_+_17327275 Show fit	2.96	ENSRNOT00000005486	Ubtd2 Links NCBI RGD Ensembl Show fit	ubiquitin domain containing 2
chrX_+_111396995 Show fit	2.79	ENSRNOT00000087634	Pih1d3 Links NCBI RGD Ensembl Show fit	PIH1 domain containing 3
chr16_-_20873344 Show fit	2.78	ENSRNOT00000027381	Cope Links NCBI RGD Ensembl Show fit	coatomer protein complex, subunit epsilon
chr1_-_22480522 Show fit	2.77	ENSRNOT00000046379	Taar7e Links NCBI RGD Ensembl Show fit	trace-amine-associated receptor 7e
chr10_+_87846947 Show fit	2.76	ENSRNOT00000077436	Krtap9-5 Links NCBI RGD Ensembl Show fit	keratin associated protein 9-5
chr10_+_87819150 Show fit	2.63	ENSRNOT00000073764 ENSRNOT00000064626	LOC680442 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC680442
chr9_+_69790831 Show fit	2.61	ENSRNOT00000045156	LOC100360781 Links NCBI RGD Ensembl Show fit	ribosomal protein L37-like
chr10_+_90731148 Show fit	2.51	ENSRNOT00000093604	Adam11 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 11
chr20_-_27083410 Show fit	2.48	ENSRNOT00000000432	Atoh7 Links NCBI RGD Ensembl Show fit	atonal bHLH transcription factor 7
chr15_-_108120279 Show fit	2.48	ENSRNOT00000090572	Dock9 Links NCBI RGD Ensembl Show fit	dedicator of cytokinesis 9
chr10_+_87782376 Show fit	2.44	ENSRNOT00000017415	LOC680396 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC680396
chr11_+_44877859 Show fit	2.40	ENSRNOT00000060838	Col8a1 Links NCBI RGD Ensembl Show fit	collagen type VIII alpha 1 chain
chr9_+_66335492 Show fit	2.39	ENSRNOT00000037555	RGD1562029 Links NCBI RGD Ensembl Show fit	similar to KIAA2012 protein
chr4_+_87440996 Show fit	2.37	ENSRNOT00000074184	Vom1r68 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 68
chr1_-_175895510 Show fit	2.34	ENSRNOT00000064535	Eif4g2 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4, gamma 2
chr1_+_41325462 Show fit	2.31	ENSRNOT00000081017 ENSRNOT00000078494 ENSRNOT00000088168	Esr1 Links NCBI RGD Ensembl Show fit	estrogen receptor 1
chr4_+_65637407 Show fit	2.21	ENSRNOT00000047954	Trim24 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 24
chr2_-_184289126 Show fit	2.20	ENSRNOT00000081678	Fbxw7 Links NCBI RGD Ensembl Show fit	F-box and WD repeat domain containing 7
chr9_+_88357556 Show fit	2.19	ENSRNOT00000020669	Col4a3 Links NCBI RGD Ensembl Show fit	collagen type IV alpha 3 chain
chr4_-_100099517 Show fit	2.18	ENSRNOT00000014277	Atoh8 Links NCBI RGD Ensembl Show fit	atonal bHLH transcription factor 8
chr18_+_57011575 Show fit	2.10	ENSRNOT00000026679	Il17b Links NCBI RGD Ensembl Show fit	interleukin 17B
chr2_+_58462949 Show fit	2.08	ENSRNOT00000080618	Nadk2 Links NCBI RGD Ensembl Show fit	NAD kinase 2, mitochondrial
chr2_-_94730978 Show fit	2.02	ENSRNOT00000087598	Zbtb10 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 10
chr11_-_45510961 Show fit	1.97	ENSRNOT00000002238	Tomm70 Links NCBI RGD Ensembl Show fit	translocase of outer mitochondrial membrane 70
chr20_+_31313018 Show fit	1.93	ENSRNOT00000036719	Tysnd1 Links NCBI RGD Ensembl Show fit	trypsin domain containing 1
chr3_-_119678092 Show fit	1.82	ENSRNOT00000085562	Ciao1 Links NCBI RGD Ensembl Show fit	cytosolic iron-sulfur assembly component 1
chr1_-_80783898 Show fit	1.79	ENSRNOT00000045306	Ceacam16 Links NCBI RGD Ensembl Show fit	carcinoembryonic antigen-related cell adhesion molecule 16
chrX_-_112328642 Show fit	1.73	ENSRNOT00000083150	Psmd10 Links NCBI RGD Ensembl Show fit	proteasome 26S subunit, non-ATPase 10
chr10_+_64336200 Show fit	1.71	ENSRNOT00000046519	Rpl37 Links NCBI RGD Ensembl Show fit	ribosomal protein L37
chr1_-_22488131 Show fit	1.60	ENSRNOT00000051416	Taar7d Links NCBI RGD Ensembl Show fit	trace-amine-associated receptor 7d
chr8_-_68525911 Show fit	1.45	ENSRNOT00000080588 ENSRNOT00000011109	Iqch Links NCBI RGD Ensembl Show fit	IQ motif containing H
chr5_+_58937615 Show fit	1.42	ENSRNOT00000080909	Tesk1 Links NCBI RGD Ensembl Show fit	testis-specific kinase 1
chr1_+_230030914 Show fit	1.35	ENSRNOT00000075730	Olr354 Links NCBI RGD Ensembl Show fit	olfactory receptor 354
chr2_-_172361779 Show fit	1.28	ENSRNOT00000085876	Schip1 Links NCBI RGD Ensembl Show fit	schwannomin interacting protein 1
chr15_+_27438853 Show fit	1.28	ENSRNOT00000011636	Olr1622 Links NCBI RGD Ensembl Show fit	olfactory receptor 1622
chr10_+_97940705 Show fit	1.20	ENSRNOT00000071153	Prkar1a Links NCBI RGD Ensembl Show fit	protein kinase cAMP-dependent type 1 regulatory subunit alpha
chr1_-_91042230 Show fit	1.19	ENSRNOT00000073107	LOC103690054 Links NCBI RGD Ensembl Show fit	DNA-directed RNA polymerase II subunit RPB9
chr3_-_122057632 Show fit	1.03	ENSRNOT00000038748	RGD1566226 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein F830045P16
chrX_-_26376467 Show fit	1.03	ENSRNOT00000051655 ENSRNOT00000036502	Arhgap6 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 6
chr8_+_85489553 Show fit	1.01	ENSRNOT00000082158	Rpl12-ps1 Links NCBI RGD Ensembl Show fit	ribosomal protein L12, pseudogene 1
chr10_+_44271587 Show fit	0.96	ENSRNOT00000047700	Trim58 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 58
chr10_+_17542374 Show fit	0.93	ENSRNOT00000064079	Fbxw11 Links NCBI RGD Ensembl Show fit	F-box and WD repeat domain containing 11
chr1_-_22508170 Show fit	0.91	ENSRNOT00000050763	Taar7c Links NCBI RGD Ensembl Show fit	trace amine-associated receptor 7C
chr18_+_14756684 Show fit	0.87	ENSRNOT00000076085 ENSRNOT00000076129	Mapre2 Links NCBI RGD Ensembl Show fit	microtubule-associated protein, RP/EB family, member 2
chr7_-_134560713 Show fit	0.77	ENSRNOT00000006621	Yaf2 Links NCBI RGD Ensembl Show fit	YY1 associated factor 2
chr13_+_101181994 Show fit	0.66	ENSRNOT00000052407	Susd4 Links NCBI RGD Ensembl Show fit	sushi domain containing 4
chr8_-_39734594 Show fit	0.66	ENSRNOT00000076872	Slc37a2 Links NCBI RGD Ensembl Show fit	solute carrier family 37 member 2
chr1_-_84856309 Show fit	0.61	ENSRNOT00000079567	AABR07002783.1 Links NCBI RGD Ensembl Show fit
chr10_+_4313100 Show fit	0.51	ENSRNOT00000074487	LOC100911685 Links NCBI RGD Ensembl Show fit	eukaryotic peptide chain release factor GTP-binding subunit ERF3B-like
chr3_+_31802999 Show fit	0.46	ENSRNOT00000041305	AABR07051996.1 Links NCBI RGD Ensembl Show fit
chrX_+_86126157 Show fit	0.34	ENSRNOT00000006992	Klhl4 Links NCBI RGD Ensembl Show fit	kelch-like family member 4
chr2_-_231521052 Show fit	0.29	ENSRNOT00000089534 ENSRNOT00000080470 ENSRNOT00000084756	Ank2 Links NCBI RGD Ensembl Show fit	ankyrin 2
chr6_-_128727374 Show fit	0.28	ENSRNOT00000082152	Syne3 Links NCBI RGD Ensembl Show fit	spectrin repeat containing, nuclear envelope family member 3
chrX_+_159505344 Show fit	0.20	ENSRNOT00000001164	Brs3 Links NCBI RGD Ensembl Show fit	bombesin receptor subtype 3
chr8_-_39734214 Show fit	0.12	ENSRNOT00000040106	Slc37a2 Links NCBI RGD Ensembl Show fit	solute carrier family 37 member 2

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
32.0	96.1	GO:0031448	regulation of fast-twitch skeletal muscle fiber contraction(GO:0031446) positive regulation of fast-twitch skeletal muscle fiber contraction(GO:0031448)
20.3	81.4	GO:0016554	cytidine to uridine editing(GO:0016554)
16.4	81.9	GO:0098528	skeletal muscle fiber differentiation(GO:0098528)
12.3	86.4	GO:0010890	positive regulation of sequestering of triglyceride(GO:0010890)
12.0	95.9	GO:0051694	pointed-end actin filament capping(GO:0051694)
11.8	35.4	GO:2001016	positive regulation of skeletal muscle cell differentiation(GO:2001016)
9.0	72.3	GO:0015871	choline transport(GO:0015871)
8.7	60.8	GO:0002074	extraocular skeletal muscle development(GO:0002074)
7.7	23.2	GO:2001205	negative regulation of osteoclast development(GO:2001205)
6.4	19.1	GO:0031443	fast-twitch skeletal muscle fiber contraction(GO:0031443)
5.8	23.1	GO:1902730	positive regulation of proteoglycan biosynthetic process(GO:1902730)
5.5	16.4	GO:0015938	coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034) fatty-acyl-CoA catabolic process(GO:0036115)
5.4	21.6	GO:0014878	response to electrical stimulus involved in regulation of muscle adaptation(GO:0014878)
5.3	244.7	GO:0003009	skeletal muscle contraction(GO:0003009)
5.0	15.1	GO:2000541	positive regulation of synaptic growth at neuromuscular junction(GO:0045887) regulation of protein geranylgeranylation(GO:2000539) positive regulation of protein geranylgeranylation(GO:2000541)
5.0	15.0	GO:0061732	mitochondrial acetyl-CoA biosynthetic process from pyruvate(GO:0061732)
4.7	14.2	GO:0014908	myotube differentiation involved in skeletal muscle regeneration(GO:0014908)
4.7	56.6	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
3.9	11.8	GO:1902568	positive regulation of eosinophil degranulation(GO:0043311) positive regulation of eosinophil activation(GO:1902568)
3.8	15.4	GO:0044339	canonical Wnt signaling pathway involved in osteoblast differentiation(GO:0044339)
3.5	10.6	GO:2000313	fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060825) regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation(GO:2000313)
3.4	10.2	GO:0014707	branchiomeric skeletal muscle development(GO:0014707)
3.2	22.5	GO:0038028	insulin receptor signaling pathway via phosphatidylinositol 3-kinase(GO:0038028)
3.0	15.0	GO:0002317	plasma cell differentiation(GO:0002317)
2.9	35.0	GO:0048664	neuron fate determination(GO:0048664)
2.9	77.6	GO:0045109	intermediate filament organization(GO:0045109)
2.7	29.8	GO:0071340	skeletal muscle acetylcholine-gated channel clustering(GO:0071340)
2.7	40.0	GO:0007288	sperm axoneme assembly(GO:0007288)
2.6	7.7	GO:0001905	activation of membrane attack complex(GO:0001905) regulation of activation of membrane attack complex(GO:0001969)
2.5	22.5	GO:2000676	positive regulation of type B pancreatic cell apoptotic process(GO:2000676)
2.4	47.8	GO:0044247	glycogen catabolic process(GO:0005980) glucan catabolic process(GO:0009251) cellular polysaccharide catabolic process(GO:0044247)
2.3	11.3	GO:0015801	aromatic amino acid transport(GO:0015801)
2.2	133.3	GO:0042398	cellular modified amino acid biosynthetic process(GO:0042398)
2.2	69.6	GO:0070296	sarcoplasmic reticulum calcium ion transport(GO:0070296)
2.1	113.8	GO:0045907	positive regulation of vasoconstriction(GO:0045907)
2.0	114.8	GO:0043462	regulation of ATPase activity(GO:0043462)
2.0	7.9	GO:0006933	negative regulation of cell adhesion involved in substrate-bound cell migration(GO:0006933)
1.6	27.9	GO:2001014	regulation of skeletal muscle cell differentiation(GO:2001014)
1.6	6.3	GO:0008050	female courtship behavior(GO:0008050)
1.5	9.0	GO:0006287	base-excision repair, gap-filling(GO:0006287)
1.4	95.6	GO:0061077	chaperone-mediated protein folding(GO:0061077)
1.4	37.4	GO:0032958	inositol phosphate biosynthetic process(GO:0032958)
1.4	42.1	GO:0006779	porphyrin-containing compound biosynthetic process(GO:0006779)
1.3	40.4	GO:0045662	negative regulation of myoblast differentiation(GO:0045662)
1.3	31.5	GO:0001502	cartilage condensation(GO:0001502)
1.2	7.1	GO:2000507	positive regulation of energy homeostasis(GO:2000507)
1.2	6.9	GO:0060666	dichotomous subdivision of terminal units involved in salivary gland branching(GO:0060666)
1.1	3.4	GO:0090038	negative regulation of protein kinase C signaling(GO:0090038)
1.1	26.9	GO:0042347	negative regulation of NF-kappaB import into nucleus(GO:0042347)
1.0	3.1	GO:0097490	trunk segmentation(GO:0035290) trunk neural crest cell migration(GO:0036484) ventral trunk neural crest cell migration(GO:0036486) sympathetic neuron projection extension(GO:0097490) sympathetic neuron projection guidance(GO:0097491)
1.0	26.4	GO:0010831	positive regulation of myotube differentiation(GO:0010831)
0.9	10.1	GO:0007175	negative regulation of epidermal growth factor-activated receptor activity(GO:0007175)
0.9	8.8	GO:1901341	activation of store-operated calcium channel activity(GO:0032237) positive regulation of store-operated calcium channel activity(GO:1901341)
0.9	3.5	GO:1901837	negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter(GO:1901837)
0.8	13.5	GO:0042407	cristae formation(GO:0042407)
0.7	8.9	GO:0060033	anatomical structure regression(GO:0060033)
0.7	5.9	GO:0010992	ubiquitin homeostasis(GO:0010992)
0.7	2.2	GO:1903378	positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway(GO:1903378)
0.7	4.1	GO:1990928	response to amino acid starvation(GO:1990928)
0.7	102.9	GO:0007519	skeletal muscle tissue development(GO:0007519)
0.6	2.3	GO:1990375	baculum development(GO:1990375)
0.5	13.7	GO:0045103	intermediate filament-based process(GO:0045103)
0.5	5.9	GO:0045916	negative regulation of complement activation(GO:0045916) negative regulation of protein activation cascade(GO:2000258)
0.5	3.7	GO:1903715	regulation of aerobic respiration(GO:1903715)
0.5	5.5	GO:2000035	regulation of stem cell division(GO:2000035)
0.5	37.9	GO:0010923	negative regulation of phosphatase activity(GO:0010923)
0.4	2.2	GO:0070562	regulation of vitamin D receptor signaling pathway(GO:0070562)
0.4	2.1	GO:0006741	NADP biosynthetic process(GO:0006741)
0.4	7.7	GO:0051205	protein insertion into membrane(GO:0051205)
0.3	9.2	GO:0009649	entrainment of circadian clock(GO:0009649)
0.3	35.8	GO:0035335	peptidyl-tyrosine dephosphorylation(GO:0035335)
0.3	12.6	GO:0070534	protein K63-linked ubiquitination(GO:0070534)
0.3	2.2	GO:0051450	myoblast proliferation(GO:0051450)
0.3	4.3	GO:0000185	activation of MAPKKK activity(GO:0000185)
0.3	10.3	GO:0030199	collagen fibril organization(GO:0030199)
0.3	6.1	GO:0009299	mRNA transcription(GO:0009299)
0.2	14.9	GO:0051703	social behavior(GO:0035176) intraspecies interaction between organisms(GO:0051703)
0.2	2.2	GO:0032836	glomerular basement membrane development(GO:0032836)
0.2	4.1	GO:0071880	adenylate cyclase-activating adrenergic receptor signaling pathway(GO:0071880)
0.2	7.4	GO:0042462	eye photoreceptor cell development(GO:0042462)
0.2	13.8	GO:0046785	microtubule polymerization(GO:0046785)
0.2	2.1	GO:1900017	positive regulation of cytokine production involved in inflammatory response(GO:1900017)
0.1	6.6	GO:0034605	cellular response to heat(GO:0034605)
0.1	1.9	GO:0031998	regulation of fatty acid beta-oxidation(GO:0031998)
0.1	1.2	GO:0046007	negative regulation of activated T cell proliferation(GO:0046007)
0.1	6.9	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.1	0.2	GO:0031989	bombesin receptor signaling pathway(GO:0031989)
0.1	0.8	GO:0015760	hexose phosphate transport(GO:0015712) glucose-6-phosphate transport(GO:0015760)
0.1	1.8	GO:0016226	iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.1	2.8	GO:0070286	axonemal dynein complex assembly(GO:0070286)
0.1	1.3	GO:0033147	negative regulation of intracellular estrogen receptor signaling pathway(GO:0033147)
0.1	1.0	GO:0051895	negative regulation of focal adhesion assembly(GO:0051895)
0.1	3.1	GO:0010501	RNA secondary structure unwinding(GO:0010501)
0.1	6.1	GO:0042633	molting cycle(GO:0042303) hair cycle(GO:0042633)
0.1	2.8	GO:0006891	intra-Golgi vesicle-mediated transport(GO:0006891)
0.1	1.3	GO:0048745	smooth muscle tissue development(GO:0048745)
0.1	2.4	GO:0035987	endodermal cell differentiation(GO:0035987)
0.1	1.1	GO:0006379	mRNA cleavage(GO:0006379)
0.0	9.7	GO:0010506	regulation of autophagy(GO:0010506)
0.0	3.2	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436)
0.0	20.0	GO:0006605	protein targeting(GO:0006605)
0.0	0.3	GO:0090286	cytoskeletal anchoring at nuclear membrane(GO:0090286)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
18.1	126.6	GO:0005862	muscle thin filament tropomyosin(GO:0005862)
15.5	77.6	GO:0045098	type III intermediate filament(GO:0045098)
12.3	147.6	GO:0005861	troponin complex(GO:0005861)
5.5	307.3	GO:0031672	A band(GO:0031672)
4.9	34.3	GO:0008091	spectrin(GO:0008091)
4.9	24.3	GO:0043293	apoptosome(GO:0043293)
4.8	19.1	GO:0060053	neurofilament cytoskeleton(GO:0060053)
3.6	72.3	GO:0001518	voltage-gated sodium channel complex(GO:0001518)
3.6	71.9	GO:0005892	acetylcholine-gated channel complex(GO:0005892)
3.5	56.6	GO:0005751	mitochondrial respiratory chain complex IV(GO:0005751)
2.9	130.1	GO:0005891	voltage-gated calcium channel complex(GO:0005891)
2.3	29.8	GO:0099634	postsynaptic specialization membrane(GO:0099634)
2.1	23.2	GO:0043205	microfibril(GO:0001527) fibril(GO:0043205)
1.9	13.5	GO:0061617	MICOS complex(GO:0061617)
1.7	99.4	GO:0016459	myosin complex(GO:0016459)
1.7	11.8	GO:0000322	storage vacuole(GO:0000322)
1.3	9.4	GO:0016281	eukaryotic translation initiation factor 4F complex(GO:0016281)
1.1	7.7	GO:0005579	membrane attack complex(GO:0005579)
1.0	56.6	GO:0016529	sarcoplasmic reticulum(GO:0016529)
0.9	13.0	GO:0031618	nuclear pericentric heterochromatin(GO:0031618)
0.8	16.4	GO:0005782	peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.7	23.5	GO:0097440	apical dendrite(GO:0097440)
0.7	91.5	GO:0030017	sarcomere(GO:0030017)
0.7	37.6	GO:0031594	neuromuscular junction(GO:0031594)
0.7	3.4	GO:0009331	glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.6	46.3	GO:0045095	keratin filament(GO:0045095)
0.6	15.0	GO:0031304	intrinsic component of mitochondrial inner membrane(GO:0031304) integral component of mitochondrial inner membrane(GO:0031305)
0.6	78.9	GO:0030176	integral component of endoplasmic reticulum membrane(GO:0030176)
0.6	4.8	GO:0045261	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275) proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.5	4.1	GO:0005850	eukaryotic translation initiation factor 2 complex(GO:0005850)
0.4	2.2	GO:1990452	Parkin-FBXW7-Cul1 ubiquitin ligase complex(GO:1990452)
0.4	2.2	GO:0005726	perichromatin fibrils(GO:0005726)
0.4	23.4	GO:0019005	SCF ubiquitin ligase complex(GO:0019005)
0.4	53.9	GO:0043195	terminal bouton(GO:0043195)
0.4	1.8	GO:0097361	CIA complex(GO:0097361)
0.4	7.4	GO:1902711	GABA-A receptor complex(GO:1902711)
0.3	7.9	GO:0000159	protein phosphatase type 2A complex(GO:0000159)
0.3	2.2	GO:0098642	collagen type IV trimer(GO:0005587) network-forming collagen trimer(GO:0098642) collagen network(GO:0098645)
0.3	7.8	GO:0031307	integral component of mitochondrial outer membrane(GO:0031307)
0.2	10.0	GO:0005637	nuclear inner membrane(GO:0005637)
0.2	2.8	GO:0030126	COPI vesicle coat(GO:0030126)
0.2	1.7	GO:0008540	proteasome regulatory particle, base subcomplex(GO:0008540)
0.1	34.9	GO:0005667	transcription factor complex(GO:0005667)
0.1	26.2	GO:0005578	proteinaceous extracellular matrix(GO:0005578)
0.1	0.3	GO:0034993	microtubule organizing center attachment site(GO:0034992) LINC complex(GO:0034993)
0.1	2.4	GO:0005581	collagen trimer(GO:0005581)
0.1	9.9	GO:0005802	trans-Golgi network(GO:0005802)
0.1	5.3	GO:0072562	blood microparticle(GO:0072562)
0.1	58.6	GO:0005615	extracellular space(GO:0005615)
0.0	0.9	GO:0035371	microtubule plus-end(GO:0035371)
0.0	0.1	GO:0043625	delta DNA polymerase complex(GO:0043625)
0.0	1.7	GO:0022625	cytosolic large ribosomal subunit(GO:0022625)
0.0	2.0	GO:0005741	mitochondrial outer membrane(GO:0005741)
0.0	1.9	GO:0005777	peroxisome(GO:0005777) microbody(GO:0042579)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
24.7	172.9	GO:0031014	troponin T binding(GO:0031014)
24.0	96.1	GO:0004687	myosin light chain kinase activity(GO:0004687)
18.3	128.2	GO:0004111	creatine kinase activity(GO:0004111)
13.6	81.4	GO:0004126	cytidine deaminase activity(GO:0004126)
12.0	191.7	GO:0005523	tropomyosin binding(GO:0005523)
8.0	47.8	GO:0090599	alpha-glucosidase activity(GO:0090599)
5.5	254.1	GO:0008307	structural constituent of muscle(GO:0008307)
4.2	71.9	GO:0022848	acetylcholine-gated cation channel activity(GO:0022848)
4.2	37.4	GO:0008440	inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440)
3.9	11.8	GO:0016230	sphingomyelin phosphodiesterase activator activity(GO:0016230)
3.5	35.4	GO:0003680	AT DNA binding(GO:0003680)
3.3	29.8	GO:0043495	protein anchor(GO:0043495)
3.2	13.0	GO:0003696	satellite DNA binding(GO:0003696)
3.2	60.8	GO:0008331	high voltage-gated calcium channel activity(GO:0008331)
3.0	15.0	GO:0050833	pyruvate transmembrane transporter activity(GO:0050833)
2.5	15.0	GO:0048030	disaccharide binding(GO:0048030)
2.4	72.3	GO:0005248	voltage-gated sodium channel activity(GO:0005248) voltage-gated ion channel activity involved in regulation of postsynaptic membrane potential(GO:1905030)
2.2	88.9	GO:0051879	Hsp90 protein binding(GO:0051879)
2.2	69.3	GO:0005245	voltage-gated calcium channel activity(GO:0005245)
1.9	11.3	GO:0015173	aromatic amino acid transmembrane transporter activity(GO:0015173)
1.9	56.6	GO:0015002	cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
1.8	9.0	GO:0051575	5'-deoxyribose-5-phosphate lyase activity(GO:0051575)
1.6	7.9	GO:0043532	angiostatin binding(GO:0043532)
1.5	7.7	GO:0031849	olfactory receptor binding(GO:0031849)
1.5	34.3	GO:0030506	ankyrin binding(GO:0030506)
1.0	22.5	GO:0005159	insulin-like growth factor receptor binding(GO:0005159)
1.0	5.1	GO:0004668	protein-arginine deiminase activity(GO:0004668)
1.0	52.6	GO:0008138	protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.9	7.8	GO:0015232	heme transporter activity(GO:0015232)
0.8	7.9	GO:0070016	armadillo repeat domain binding(GO:0070016)
0.8	7.1	GO:0008190	eukaryotic initiation factor 4E binding(GO:0008190)
0.8	6.9	GO:0016004	phospholipase activator activity(GO:0016004)
0.7	20.0	GO:0004181	metallocarboxypeptidase activity(GO:0004181)
0.7	10.2	GO:0001206	transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206)
0.7	35.1	GO:0045182	translation regulator activity(GO:0045182)
0.7	3.4	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.6	6.3	GO:0004887	thyroid hormone receptor activity(GO:0004887)
0.5	10.0	GO:0005521	lamin binding(GO:0005521)
0.5	7.4	GO:0005237	inhibitory extracellular ligand-gated ion channel activity(GO:0005237)
0.5	14.7	GO:0003785	actin monomer binding(GO:0003785)
0.5	4.5	GO:0034056	estrogen response element binding(GO:0034056)
0.5	8.8	GO:0015279	store-operated calcium channel activity(GO:0015279)
0.4	2.2	GO:0050816	phosphothreonine binding(GO:0050816)
0.4	25.4	GO:0005201	extracellular matrix structural constituent(GO:0005201)
0.4	12.6	GO:0061631	ubiquitin conjugating enzyme activity(GO:0061631)
0.4	16.4	GO:0016831	carboxy-lyase activity(GO:0016831)
0.3	12.6	GO:0004364	glutathione transferase activity(GO:0004364)
0.3	6.9	GO:0030247	pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.3	5.3	GO:0001848	complement binding(GO:0001848)
0.2	10.1	GO:0001784	phosphotyrosine binding(GO:0001784)
0.2	52.0	GO:0019902	phosphatase binding(GO:0019902)
0.2	28.6	GO:0004222	metalloendopeptidase activity(GO:0004222)
0.2	12.4	GO:0003743	translation initiation factor activity(GO:0003743)
0.2	30.9	GO:0003714	transcription corepressor activity(GO:0003714)
0.2	4.1	GO:0004383	guanylate cyclase activity(GO:0004383)
0.2	73.9	GO:0004842	ubiquitin-protein transferase activity(GO:0004842)
0.1	24.1	GO:0044822	mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.1	0.8	GO:0061513	hexose phosphate transmembrane transporter activity(GO:0015119) organophosphate:inorganic phosphate antiporter activity(GO:0015315) hexose-phosphate:inorganic phosphate antiporter activity(GO:0015526) glucose 6-phosphate:inorganic phosphate antiporter activity(GO:0061513)
0.1	2.1	GO:0003951	NAD+ kinase activity(GO:0003951)
0.1	5.9	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811)
0.1	4.3	GO:0019843	rRNA binding(GO:0019843)
0.1	0.2	GO:0004946	bombesin receptor activity(GO:0004946)
0.1	1.2	GO:0034236	protein kinase A catalytic subunit binding(GO:0034236)
0.1	6.1	GO:0001085	RNA polymerase II transcription factor binding(GO:0001085)
0.1	7.4	GO:0051015	actin filament binding(GO:0051015)
0.0	3.1	GO:0004004	RNA helicase activity(GO:0003724) ATP-dependent RNA helicase activity(GO:0004004)
0.0	34.7	GO:0008092	cytoskeletal protein binding(GO:0008092)
0.0	1.3	GO:0099589	G-protein coupled serotonin receptor activity(GO:0004993) serotonin receptor activity(GO:0099589)
0.0	1.6	GO:0005200	structural constituent of cytoskeleton(GO:0005200)
0.0	36.6	GO:0003700	nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0	3.0	GO:0043130	ubiquitin binding(GO:0043130)
0.0	1.2	GO:0003899	DNA-directed RNA polymerase activity(GO:0003899)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.0	96.1	SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES	Genes related to regulation of the actin cytoskeleton
1.7	143.5	PID RB 1PATHWAY	Regulation of retinoblastoma protein
1.4	63.7	PID AURORA B PATHWAY	Aurora B signaling
1.1	23.2	PID INTEGRIN5 PATHWAY	Beta5 beta6 beta7 and beta8 integrin cell surface interactions
1.0	26.4	PID ERBB2 ERBB3 PATHWAY	ErbB2/ErbB3 signaling events
0.8	102.8	PID ERBB1 DOWNSTREAM PATHWAY	ErbB1 downstream signaling
0.7	6.9	SA FAS SIGNALING	The TNF-type receptor Fas induces apoptosis on ligand binding.
0.6	11.8	PID INSULIN GLUCOSE PATHWAY	Insulin-mediated glucose transport
0.6	21.6	PID FOXO PATHWAY	FoxO family signaling
0.5	23.4	PID HEDGEHOG GLI PATHWAY	Hedgehog signaling events mediated by Gli proteins
0.5	9.0	PID DNA PK PATHWAY	DNA-PK pathway in nonhomologous end joining
0.4	11.5	PID FOXM1 PATHWAY	FOXM1 transcription factor network
0.3	15.0	PID AJDISS 2PATHWAY	Posttranslational regulation of adherens junction stability and dissassembly
0.2	15.0	PID MYC REPRESS PATHWAY	Validated targets of C-MYC transcriptional repression
0.2	4.1	PID LPA4 PATHWAY	LPA4-mediated signaling events
0.2	9.9	PID FAK PATHWAY	Signaling events mediated by focal adhesion kinase
0.2	4.1	PID TCPTP PATHWAY	Signaling events mediated by TCPTP
0.2	3.7	PID ERBB4 PATHWAY	ErbB4 signaling events
0.1	2.5	PID CDC42 REG PATHWAY	Regulation of CDC42 activity
0.1	4.6	PID SYNDECAN 1 PATHWAY	Syndecan-1-mediated signaling events
0.1	2.2	PID MYC PATHWAY	C-MYC pathway
0.1	26.6	NABA ECM REGULATORS	Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
0.1	7.1	PID MYC ACTIV PATHWAY	Validated targets of C-MYC transcriptional activation
0.1	1.2	PID INTEGRIN A4B1 PATHWAY	Alpha4 beta1 integrin signaling events
0.0	2.2	PID AR TF PATHWAY	Regulation of Androgen receptor activity
0.0	1.4	PID RXR VDR PATHWAY	RXR and RAR heterodimerization with other nuclear receptor

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
10.5	409.4	REACTOME STRIATED MUSCLE CONTRACTION	Genes involved in Striated Muscle Contraction
6.0	71.9	REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS	Genes involved in Presynaptic nicotinic acetylcholine receptors
3.0	106.6	REACTOME INTERACTION BETWEEN L1 AND ANKYRINS	Genes involved in Interaction between L1 and Ankyrins
2.4	47.8	REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS	Genes involved in Glycogen breakdown (glycogenolysis)
1.5	63.0	REACTOME NCAM1 INTERACTIONS	Genes involved in NCAM1 interactions
1.4	35.4	REACTOME ERK MAPK TARGETS	Genes involved in ERK/MAPK targets
0.7	8.8	REACTOME ELEVATION OF CYTOSOLIC CA2 LEVELS	Genes involved in Elevation of cytosolic Ca2+ levels
0.6	7.1	REACTOME DESTABILIZATION OF MRNA BY AUF1 HNRNP D0	Genes involved in Destabilization of mRNA by AUF1 (hnRNP D0)
0.6	118.6	REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES	Genes involved in Metabolism of amino acids and derivatives
0.5	8.7	REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS	Genes involved in Proteolytic cleavage of SNARE complex proteins
0.4	70.1	REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION	Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.3	12.7	REACTOME COLLAGEN FORMATION	Genes involved in Collagen formation
0.3	4.8	REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING	Genes involved in Formation of ATP by chemiosmotic coupling
0.3	11.3	REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE	Genes involved in Amino acid transport across the plasma membrane
0.3	4.1	REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY	Genes involved in Adenylate cyclase activating pathway
0.3	7.4	REACTOME LIGAND GATED ION CHANNEL TRANSPORT	Genes involved in Ligand-gated ion channel transport
0.3	5.3	REACTOME INTRINSIC PATHWAY	Genes involved in Intrinsic Pathway
0.2	2.8	REACTOME COPI MEDIATED TRANSPORT	Genes involved in COPI Mediated Transport
0.2	7.7	REACTOME COMPLEMENT CASCADE	Genes involved in Complement cascade
0.2	14.1	REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES	Genes involved in Loss of Nlp from mitotic centrosomes
0.2	7.8	REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT	Genes involved in ABC-family proteins mediated transport
0.2	1.2	REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB	Genes involved in PKA-mediated phosphorylation of CREB
0.1	2.7	REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS	Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs)
0.1	8.3	REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES	Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1	2.2	REACTOME SIGNALING BY FGFR1 FUSION MUTANTS	Genes involved in Signaling by FGFR1 fusion mutants
0.1	3.4	REACTOME SYNTHESIS OF PA	Genes involved in Synthesis of PA
0.1	1.4	REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS	Genes involved in Cell-extracellular matrix interactions
0.1	2.3	REACTOME NUCLEAR SIGNALING BY ERBB4	Genes involved in Nuclear signaling by ERBB4
0.0	1.7	REACTOME PEPTIDE CHAIN ELONGATION	Genes involved in Peptide chain elongation