GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Rad21 Links NCBI RGD Ensembl	ENSRNOG00000004420	RAD21 cohesin complex component
Smc3 Links NCBI RGD Ensembl	ENSRNOG00000014173	structural maintenance of chromosomes 3

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Rad21	rn6_v1_chr7_-_91538673_91538673	0.29	7.7e-08	Click!
Smc3	rn6_v1_chr1_+_274309758_274309758	0.29	1.3e-07	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr15_+_32244416 Show fit	74.36	ENSRNOT00000012019 ENSRNOT00000060254	AABR07017902.1 Links NCBI RGD Ensembl Show fit
chr6_-_138662365 Show fit	70.04	ENSRNOT00000066209 ENSRNOT00000084892	Ighm Links NCBI RGD Ensembl Show fit	immunoglobulin heavy constant mu
chr1_+_82480195 Show fit	68.99	ENSRNOT00000028051	Tgfb1 Links NCBI RGD Ensembl Show fit	transforming growth factor, beta 1
chr15_+_57241968 Show fit	65.57	ENSRNOT00000082191	Lcp1 Links NCBI RGD Ensembl Show fit	lymphocyte cytosolic protein 1
chr15_+_31948035 Show fit	62.57	ENSRNOT00000071627	AABR07017868.1 Links NCBI RGD Ensembl Show fit
chr13_+_51958834 Show fit	58.92	ENSRNOT00000007833	Ptpn7 Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, non-receptor type 7
chr6_-_139041654 Show fit	57.00	ENSRNOT00000075664	AABR07065656.1 Links NCBI RGD Ensembl Show fit
chr6_-_138900915 Show fit	56.93	ENSRNOT00000075363	AABR07065656.3 Links NCBI RGD Ensembl Show fit
chr15_+_30270740 Show fit	55.37	ENSRNOT00000070991	AABR07017707.1 Links NCBI RGD Ensembl Show fit
chr15_+_31950986 Show fit	54.10	ENSRNOT00000080233	AABR07017868.4 Links NCBI RGD Ensembl Show fit
chr20_-_5212624 Show fit	54.07	ENSRNOT00000074261	LOC103689996 Links NCBI RGD Ensembl Show fit	antigen peptide transporter 2
chr6_-_139747579 Show fit	52.71	ENSRNOT00000075502	AABR07065705.3 Links NCBI RGD Ensembl Show fit
chr20_+_3995544 Show fit	51.54	ENSRNOT00000000527	Tap2 Links NCBI RGD Ensembl Show fit	transporter 2, ATP binding cassette subfamily B member
chr6_-_140215907 Show fit	50.06	ENSRNOT00000086370	AABR07065750.1 Links NCBI RGD Ensembl Show fit
chr6_-_138536162 Show fit	48.16	ENSRNOT00000083031	AABR07065643.1 Links NCBI RGD Ensembl Show fit
chr6_+_137959171 Show fit	47.22	ENSRNOT00000006835	Crip1 Links NCBI RGD Ensembl Show fit	cysteine rich protein 1
chr15_+_31719866 Show fit	46.57	ENSRNOT00000072127	AABR07017838.2 Links NCBI RGD Ensembl Show fit
chr6_-_138772736 Show fit	46.13	ENSRNOT00000071492	AABR07065651.1 Links NCBI RGD Ensembl Show fit
chr15_-_29903755 Show fit	46.01	ENSRNOT00000066802	AABR07017669.1 Links NCBI RGD Ensembl Show fit
chr6_-_141008427 Show fit	45.58	ENSRNOT00000074472	AABR07065778.2 Links NCBI RGD Ensembl Show fit
chr12_-_22127021 Show fit	45.52	ENSRNOT00000076261	Sap25 Links NCBI RGD Ensembl Show fit	Sin3A-associated protein 25
chr6_-_138948424 Show fit	45.04	ENSRNOT00000072566	AABR07065656.2 Links NCBI RGD Ensembl Show fit
chr15_+_31579478 Show fit	44.85	ENSRNOT00000071642	AABR07017830.1 Links NCBI RGD Ensembl Show fit
chr6_-_142372031 Show fit	44.58	ENSRNOT00000063929	AABR07065814.3 Links NCBI RGD Ensembl Show fit
chr20_-_3374344 Show fit	43.52	ENSRNOT00000082999	Ppp1r18 Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 18
chr9_+_40975836 Show fit	42.59	ENSRNOT00000084470	Ptpn18 Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, non-receptor type 18
chr8_-_62424303 Show fit	42.31	ENSRNOT00000091223	Csk Links NCBI RGD Ensembl Show fit	c-src tyrosine kinase
chr6_-_138631997 Show fit	42.28	ENSRNOT00000073304	AABR07065651.3 Links NCBI RGD Ensembl Show fit
chr6_+_139523495 Show fit	42.17	ENSRNOT00000075467	AABR07065699.4 Links NCBI RGD Ensembl Show fit
chr3_+_114772603 Show fit	42.14	ENSRNOT00000073569	MGC105649 Links NCBI RGD Ensembl Show fit	hypothetical LOC302884
chr12_-_22126858 Show fit	42.12	ENSRNOT00000084480	Sap25 Links NCBI RGD Ensembl Show fit	Sin3A-associated protein 25
chr15_-_29341843 Show fit	41.90	ENSRNOT00000047082	LOC100360997 Links NCBI RGD Ensembl Show fit	rCG61261-like
chr6_-_138679506 Show fit	41.32	ENSRNOT00000075376	AABR07065651.4 Links NCBI RGD Ensembl Show fit
chr9_-_92775816 Show fit	40.51	ENSRNOT00000029635	RGD1563917 Links NCBI RGD Ensembl Show fit	similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa)
chr6_-_138507135 Show fit	40.36	ENSRNOT00000071078	AABR07065640.1 Links NCBI RGD Ensembl Show fit
chr6_-_138931262 Show fit	40.02	ENSRNOT00000078126 ENSRNOT00000042118	LOC100359993 Links NCBI RGD Ensembl Show fit	Ighg protein-like
chr15_-_29987717 Show fit	39.71	ENSRNOT00000071501	AABR07017676.2 Links NCBI RGD Ensembl Show fit
chr6_+_139486942 Show fit	39.63	ENSRNOT00000080320	AABR07065699.3 Links NCBI RGD Ensembl Show fit
chr6_-_139710905 Show fit	39.59	ENSRNOT00000077430	AABR07065705.2 Links NCBI RGD Ensembl Show fit
chr6_-_139004980 Show fit	39.45	ENSRNOT00000085427 ENSRNOT00000087351	AABR07065656.4 Links NCBI RGD Ensembl Show fit
chr15_+_29157294 Show fit	39.34	ENSRNOT00000085162	AABR07017604.1 Links NCBI RGD Ensembl Show fit
chr8_-_48564722 Show fit	38.42	ENSRNOT00000067902	Cbl Links NCBI RGD Ensembl Show fit	Cbl proto-oncogene
chr15_+_31436302 Show fit	38.14	ENSRNOT00000071012	AABR07017825.2 Links NCBI RGD Ensembl Show fit
chr6_-_138954577 Show fit	37.98	ENSRNOT00000042728	AABR07065656.7 Links NCBI RGD Ensembl Show fit
chr6_-_138764901 Show fit	37.40	ENSRNOT00000075175	AABR07065651.2 Links NCBI RGD Ensembl Show fit
chr15_-_30157685 Show fit	37.40	ENSRNOT00000085082	AABR07017693.2 Links NCBI RGD Ensembl Show fit
chr10_+_55013703 Show fit	37.08	ENSRNOT00000032785	Pik3r5 Links NCBI RGD Ensembl Show fit	phosphoinositide-3-kinase, regulatory subunit 5
chr6_+_139293294 Show fit	36.52	ENSRNOT00000050297 ENSRNOT00000081817	LOC100359993 Links NCBI RGD Ensembl Show fit	Ighg protein-like
chr6_-_140418831 Show fit	36.25	ENSRNOT00000086301	AABR07065768.2 Links NCBI RGD Ensembl Show fit
chr19_+_37652969 Show fit	36.09	ENSRNOT00000041970	Carmil2 Links NCBI RGD Ensembl Show fit	capping protein regulator and myosin 1 linker 2
chr15_+_31282047 Show fit	35.92	ENSRNOT00000081826	AABR07017812.1 Links NCBI RGD Ensembl Show fit
chr15_-_30147793 Show fit	35.46	ENSRNOT00000060399	AABR07017693.1 Links NCBI RGD Ensembl Show fit
chr15_+_31462806 Show fit	34.52	ENSRNOT00000072946	AABR07017825.3 Links NCBI RGD Ensembl Show fit
chr15_+_31167860 Show fit	34.44	ENSRNOT00000065401	LOC100360997 Links NCBI RGD Ensembl Show fit	rCG61261-like
chr15_+_31895223 Show fit	34.20	ENSRNOT00000092202	AABR07017855.1 Links NCBI RGD Ensembl Show fit
chr13_-_110257367 Show fit	34.17	ENSRNOT00000005576	Dtl Links NCBI RGD Ensembl Show fit	denticleless E3 ubiquitin protein ligase homolog
chr15_+_31178339 Show fit	33.85	ENSRNOT00000089064	AABR07017798.2 Links NCBI RGD Ensembl Show fit
chr15_-_29532988 Show fit	33.76	ENSRNOT00000074782	AABR07017639.1 Links NCBI RGD Ensembl Show fit
chr1_-_1116926 Show fit	33.58	ENSRNOT00000062027	Raet1l Links NCBI RGD Ensembl Show fit	retinoic acid early transcript 1L
chr15_+_31057655 Show fit	33.49	ENSRNOT00000073618	AABR07017783.2 Links NCBI RGD Ensembl Show fit
chr6_-_142060032 Show fit	32.76	ENSRNOT00000064717	AABR07065811.1 Links NCBI RGD Ensembl Show fit
chr14_-_45797887 Show fit	32.72	ENSRNOT00000029209	Tbc1d1 Links NCBI RGD Ensembl Show fit	TBC1 domain family member 1
chr20_+_11365697 Show fit	32.20	ENSRNOT00000001611	Aire Links NCBI RGD Ensembl Show fit	autoimmune regulator
chr2_+_248249468 Show fit	31.60	ENSRNOT00000022648	Gbp4 Links NCBI RGD Ensembl Show fit	guanylate binding protein 4
chr9_+_98505259 Show fit	31.45	ENSRNOT00000051810	Erfe Links NCBI RGD Ensembl Show fit	erythroferrone
chr5_-_150520884 Show fit	31.20	ENSRNOT00000085482	Rcc1 Links NCBI RGD Ensembl Show fit	regulator of chromosome condensation 1
chr6_-_138685656 Show fit	30.89	ENSRNOT00000041706	AABR07065651.7 Links NCBI RGD Ensembl Show fit
chr15_+_30462669 Show fit	30.88	ENSRNOT00000060357	RGD1564212 Links NCBI RGD Ensembl Show fit	similar to T cell receptor alpha chain
chr14_-_2867397 Show fit	30.76	ENSRNOT00000030428	Rpl5 Links NCBI RGD Ensembl Show fit	ribosomal protein L5
chr20_-_10680283 Show fit	30.64	ENSRNOT00000001579	Sik1 Links NCBI RGD Ensembl Show fit	salt-inducible kinase 1
chr15_-_29446332 Show fit	29.97	ENSRNOT00000082901	AABR07017634.1 Links NCBI RGD Ensembl Show fit
chr4_+_170958196 Show fit	29.76	ENSRNOT00000007905	Pde6h Links NCBI RGD Ensembl Show fit	phosphodiesterase 6H
chr15_+_32386816 Show fit	29.57	ENSRNOT00000060322	AABR07017901.1 Links NCBI RGD Ensembl Show fit
chr15_+_31395772 Show fit	29.37	ENSRNOT00000075087	AABR07017824.1 Links NCBI RGD Ensembl Show fit
chr6_-_138550417 Show fit	29.28	ENSRNOT00000071945	AABR07065645.1 Links NCBI RGD Ensembl Show fit
chr20_+_3935529 Show fit	29.21	ENSRNOT00000072458	LOC108348072 Links NCBI RGD Ensembl Show fit	class II histocompatibility antigen, M alpha chain
chr15_-_30174197 Show fit	28.09	ENSRNOT00000074419	LOC688340 Links NCBI RGD Ensembl Show fit	T-cell receptor alpha chain V region PHDS58-like
chr15_-_29369504 Show fit	28.04	ENSRNOT00000060297	AABR07017624.1 Links NCBI RGD Ensembl Show fit
chrX_-_105390580 Show fit	27.65	ENSRNOT00000077547	Btk Links NCBI RGD Ensembl Show fit	Bruton tyrosine kinase
chr17_+_77224112 Show fit	26.77	ENSRNOT00000024178	Mcm10 Links NCBI RGD Ensembl Show fit	minichromosome maintenance 10 replication initiation factor
chr6_-_139637187 Show fit	26.66	ENSRNOT00000089454	LOC100359993 Links NCBI RGD Ensembl Show fit	Ighg protein-like
chr20_-_5244386 Show fit	26.50	ENSRNOT00000070886	RT1-DMa Links NCBI RGD Ensembl Show fit	RT1 class II, locus DMa
chr15_+_30735921 Show fit	26.26	ENSRNOT00000078887	AABR07017763.2 Links NCBI RGD Ensembl Show fit
chr10_-_84920886 Show fit	26.24	ENSRNOT00000068083	Sp2 Links NCBI RGD Ensembl Show fit	Sp2 transcription factor
chr15_+_31642169 Show fit	26.15	ENSRNOT00000072362	AABR07017833.1 Links NCBI RGD Ensembl Show fit
chr15_-_29360198 Show fit	26.15	ENSRNOT00000072745	LOC688340 Links NCBI RGD Ensembl Show fit	T-cell receptor alpha chain V region PHDS58-like
chr11_-_55044581 Show fit	25.82	ENSRNOT00000046330	Morc1 Links NCBI RGD Ensembl Show fit	MORC family CW-type zinc finger 1
chr10_+_4536180 Show fit	25.18	ENSRNOT00000003309	Zc3h7a Links NCBI RGD Ensembl Show fit	zinc finger CCCH type containing 7 A
chr6_+_139531330 Show fit	25.07	ENSRNOT00000083025	AABR07065699.1 Links NCBI RGD Ensembl Show fit
chr15_+_29108981 Show fit	25.05	ENSRNOT00000073133	AABR07017597.1 Links NCBI RGD Ensembl Show fit
chr15_+_30802299 Show fit	24.78	ENSRNOT00000072418	AABR07017768.3 Links NCBI RGD Ensembl Show fit
chr1_-_4653210 Show fit	24.71	ENSRNOT00000019121	Rab32 Links NCBI RGD Ensembl Show fit	RAB32, member RAS oncogene family
chr18_+_27576129 Show fit	24.32	ENSRNOT00000070930	Kdm3b Links NCBI RGD Ensembl Show fit	lysine demethylase 3B
chr15_-_29922522 Show fit	24.24	ENSRNOT00000081778	AABR07017669.2 Links NCBI RGD Ensembl Show fit
chr1_-_82004538 Show fit	24.15	ENSRNOT00000087572	Pou2f2 Links NCBI RGD Ensembl Show fit	POU class 2 homeobox 2
chr15_-_29728771 Show fit	23.68	ENSRNOT00000073056	AABR07017657.1 Links NCBI RGD Ensembl Show fit
chr15_-_29993639 Show fit	23.58	ENSRNOT00000071822	AABR07017677.1 Links NCBI RGD Ensembl Show fit
chr1_+_221773254 Show fit	23.43	ENSRNOT00000028646	Rasgrp2 Links NCBI RGD Ensembl Show fit	RAS guanyl releasing protein 2
chr15_+_30785248 Show fit	23.40	ENSRNOT00000089085	AABR07017768.5 Links NCBI RGD Ensembl Show fit
chr10_-_70241254 Show fit	23.00	ENSRNOT00000038376	Rad51d Links NCBI RGD Ensembl Show fit	RAD51 paralog D
chr17_-_71105286 Show fit	22.94	ENSRNOT00000025901	Prkcq Links NCBI RGD Ensembl Show fit	protein kinase C, theta
chr15_-_29680444 Show fit	22.92	ENSRNOT00000075008	AABR07017658.1 Links NCBI RGD Ensembl Show fit
chr15_-_30296451 Show fit	22.63	ENSRNOT00000067263	AABR07017714.2 Links NCBI RGD Ensembl Show fit
chr1_-_198450688 Show fit	22.61	ENSRNOT00000027392	Pagr1 Links NCBI RGD Ensembl Show fit	Paxip1-associated glutamate-rich protein 1
chr5_-_159602251 Show fit	22.20	ENSRNOT00000011394	Necap2 Links NCBI RGD Ensembl Show fit	NECAP endocytosis associated 2
chrX_-_72078551 Show fit	22.20	ENSRNOT00000076978	Rps4x Links NCBI RGD Ensembl Show fit	ribosomal protein S4, X-linked
chr15_+_29096865 Show fit	21.78	ENSRNOT00000077709	AABR07017597.2 Links NCBI RGD Ensembl Show fit
chr15_+_31243097 Show fit	21.75	ENSRNOT00000042721	LOC100360891 Links NCBI RGD Ensembl Show fit	RGD1359684 protein-like
chr8_+_71822129 Show fit	21.72	ENSRNOT00000089147	Dapk2 Links NCBI RGD Ensembl Show fit	death-associated protein kinase 2
chr10_-_19715832 Show fit	21.52	ENSRNOT00000040278	RGD1564698 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S10
chr9_-_10441834 Show fit	21.46	ENSRNOT00000043704	Rpl36 Links NCBI RGD Ensembl Show fit	ribosomal protein L36
chr5_+_122508388 Show fit	21.44	ENSRNOT00000038410	Tctex1d1 Links NCBI RGD Ensembl Show fit	Tctex1 domain containing 1
chr15_+_29073755 Show fit	21.19	ENSRNOT00000075409	AABR07017595.1 Links NCBI RGD Ensembl Show fit
chr1_-_198460126 Show fit	21.19	ENSRNOT00000082940 ENSRNOT00000086019	Maz Links NCBI RGD Ensembl Show fit	MYC associated zinc finger protein
chr16_-_22411225 Show fit	21.12	ENSRNOT00000016204	RGD1559708 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S10
chr13_-_110784209 Show fit	20.85	ENSRNOT00000071698	Traf5 Links NCBI RGD Ensembl Show fit	TNF receptor-associated factor 5
chr15_+_31456265 Show fit	20.85	ENSRNOT00000075092	AABR07017825.1 Links NCBI RGD Ensembl Show fit
chr6_-_139997537 Show fit	20.59	ENSRNOT00000073207	AABR07065740.1 Links NCBI RGD Ensembl Show fit
chr20_-_32416044 Show fit	20.49	ENSRNOT00000067004	Ccar1 Links NCBI RGD Ensembl Show fit	cell division cycle and apoptosis regulator 1
chr1_-_101131413 Show fit	20.40	ENSRNOT00000093729	Flt3lg Links NCBI RGD Ensembl Show fit	fms-related tyrosine kinase 3 ligand
chr16_-_20890949 Show fit	20.36	ENSRNOT00000081977	Homer3 Links NCBI RGD Ensembl Show fit	homer scaffolding protein 3
chr5_+_169506138 Show fit	20.29	ENSRNOT00000014904	Rpl22 Links NCBI RGD Ensembl Show fit	ribosomal protein L22
chr9_-_82327534 Show fit	20.28	ENSRNOT00000024444	Nhej1 Links NCBI RGD Ensembl Show fit	nonhomologous end-joining factor 1
chr4_-_170841187 Show fit	20.13	ENSRNOT00000007485	Art4 Links NCBI RGD Ensembl Show fit	ADP-ribosyltransferase 4
chr12_-_46845079 Show fit	20.07	ENSRNOT00000047466 ENSRNOT00000064115	Pxn Links NCBI RGD Ensembl Show fit	paxillin
chr15_+_30612409 Show fit	20.05	ENSRNOT00000072977	AABR07017748.1 Links NCBI RGD Ensembl Show fit
chr1_-_198706852 Show fit	20.02	ENSRNOT00000024074	Dctpp1 Links NCBI RGD Ensembl Show fit	dCTP pyrophosphatase 1
chr15_+_32188736 Show fit	19.79	ENSRNOT00000081436	AABR07017878.1 Links NCBI RGD Ensembl Show fit
chr1_+_105113595 Show fit	19.69	ENSRNOT00000020853 ENSRNOT00000079655	Prmt3 Links NCBI RGD Ensembl Show fit	protein arginine methyltransferase 3
chr4_+_145489869 Show fit	19.60	ENSRNOT00000082618	Fancd2 Links NCBI RGD Ensembl Show fit	Fanconi anemia, complementation group D2
chr3_+_170994038 Show fit	19.21	ENSRNOT00000081823	Spo11 Links NCBI RGD Ensembl Show fit	SPO11, initiator of meiotic double stranded breaks
chr3_+_148150698 Show fit	18.70	ENSRNOT00000087075 ENSRNOT00000010251	Hm13 Links NCBI RGD Ensembl Show fit	histocompatibility minor 13
chr1_-_157700064 Show fit	18.48	ENSRNOT00000031974	Ddias Links NCBI RGD Ensembl Show fit	DNA damage-induced apoptosis suppressor
chr20_+_4020317 Show fit	18.43	ENSRNOT00000000526	RT1-DOb Links NCBI RGD Ensembl Show fit	RT1 class II, locus DOb
chr17_+_9631925 Show fit	17.77	ENSRNOT00000018114	Ddx41 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 41
chr15_+_30750093 Show fit	17.65	ENSRNOT00000071830	AABR07017763.1 Links NCBI RGD Ensembl Show fit
chr15_+_32296119 Show fit	17.60	ENSRNOT00000072496	AABR07017892.1 Links NCBI RGD Ensembl Show fit
chr6_-_139033819 Show fit	17.29	ENSRNOT00000091961	AABR07065656.6 Links NCBI RGD Ensembl Show fit
chr16_+_73584521 Show fit	17.25	ENSRNOT00000024301	Gins4 Links NCBI RGD Ensembl Show fit	GINS complex subunit 4
chr16_+_1979191 Show fit	17.15	ENSRNOT00000014382	Ppif Links NCBI RGD Ensembl Show fit	peptidylprolyl isomerase F
chr4_+_115024927 Show fit	16.59	ENSRNOT00000090987	Mob1a Links NCBI RGD Ensembl Show fit	MOB kinase activator 1A
chr12_-_46794797 Show fit	16.54	ENSRNOT00000001518	Rplp0 Links NCBI RGD Ensembl Show fit	ribosomal protein lateral stalk subunit P0
chr1_-_89258935 Show fit	16.29	ENSRNOT00000003180	LOC100361079 Links NCBI RGD Ensembl Show fit	ribosomal protein L36-like
chr19_-_15733412 Show fit	16.25	ENSRNOT00000014831	Irx6 Links NCBI RGD Ensembl Show fit	iroquois homeobox 6
chr15_+_30910039 Show fit	16.20	ENSRNOT00000072686	AABR07017772.1 Links NCBI RGD Ensembl Show fit
chr15_+_34282936 Show fit	16.14	ENSRNOT00000026364	Irf9 Links NCBI RGD Ensembl Show fit	interferon regulatory factor 9
chr13_-_60496511 Show fit	16.10	ENSRNOT00000004495	Cdc73 Links NCBI RGD Ensembl Show fit	cell division cycle 73
chr15_+_30862478 Show fit	15.96	ENSRNOT00000071566	AABR07017769.1 Links NCBI RGD Ensembl Show fit
chr8_-_21661259 Show fit	15.86	ENSRNOT00000068308	Fbxl12 Links NCBI RGD Ensembl Show fit	F-box and leucine-rich repeat protein 12
chr15_-_29623597 Show fit	15.82	ENSRNOT00000074483	AABR07017647.1 Links NCBI RGD Ensembl Show fit
chr16_+_9563218 Show fit	15.76	ENSRNOT00000035915	Arhgap22 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 22
chr15_+_31852416 Show fit	15.74	ENSRNOT00000060380	AABR07017849.1 Links NCBI RGD Ensembl Show fit
chr13_+_67611708 Show fit	15.70	ENSRNOT00000063833	Tpr Links NCBI RGD Ensembl Show fit	translocated promoter region, nuclear basket protein
chr19_-_10620671 Show fit	15.66	ENSRNOT00000021842	Ccl17 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 17
chr10_-_70259553 Show fit	15.65	ENSRNOT00000011320	Nle1 Links NCBI RGD Ensembl Show fit	notchless homolog 1
chr9_+_16702460 Show fit	15.48	ENSRNOT00000061432	Ptk7 Links NCBI RGD Ensembl Show fit	protein tyrosine kinase 7
chr1_+_219144205 Show fit	15.27	ENSRNOT00000083942	Unc93b1 Links NCBI RGD Ensembl Show fit	unc-93 homolog B1 (C. elegans)
chr12_-_42376426 Show fit	15.25	ENSRNOT00000057258	LOC103689988 Links NCBI RGD Ensembl Show fit	2'-5'-oligoadenylate synthase 1A-like
chr1_-_101426852 Show fit	15.20	ENSRNOT00000028217	Ruvbl2 Links NCBI RGD Ensembl Show fit	RuvB-like AAA ATPase 2
chr10_+_55492404 Show fit	15.06	ENSRNOT00000005588 ENSRNOT00000078038	Rpl26 Links NCBI RGD Ensembl Show fit	ribosomal protein L26
chr15_-_29841388 Show fit	15.04	ENSRNOT00000084501	AABR07017662.4 Links NCBI RGD Ensembl Show fit
chr2_-_199771896 Show fit	14.89	ENSRNOT00000043937	Chd1l Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 1-like
chr10_+_103703404 Show fit	14.88	ENSRNOT00000086469	Rab37 Links NCBI RGD Ensembl Show fit	RAB37, member RAS oncogene family
chr8_-_83693472 Show fit	14.80	ENSRNOT00000015947	Fam83b Links NCBI RGD Ensembl Show fit	family with sequence similarity 83, member B
chr12_+_13299859 Show fit	14.65	ENSRNOT00000039191	LOC683674 Links NCBI RGD Ensembl Show fit	similar to Protein C7orf26 homolog
chr6_+_52751106 Show fit	14.44	ENSRNOT00000014373	Twistnb Links NCBI RGD Ensembl Show fit	TWIST neighbor
chr18_+_36829062 Show fit	14.43	ENSRNOT00000025467 ENSRNOT00000086979	Tcerg1 Links NCBI RGD Ensembl Show fit	transcription elongation regulator 1
chr15_+_32076297 Show fit	14.30	ENSRNOT00000060310	AABR07017870.1 Links NCBI RGD Ensembl Show fit
chr7_+_34744483 Show fit	14.28	ENSRNOT00000007465	Usp44 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 44
chr11_-_67756799 Show fit	14.03	ENSRNOT00000030975	Parp9 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 9
chr3_-_80873887 Show fit	13.98	ENSRNOT00000024280	Dgkz Links NCBI RGD Ensembl Show fit	diacylglycerol kinase zeta
chr8_+_132553218 Show fit	13.76	ENSRNOT00000006554	Limd1 Links NCBI RGD Ensembl Show fit	LIM domains containing 1
chr15_+_30926938 Show fit	13.73	ENSRNOT00000075625	AABR07017773.1 Links NCBI RGD Ensembl Show fit
chr3_-_72071895 Show fit	13.67	ENSRNOT00000082857	Selenoh Links NCBI RGD Ensembl Show fit	selenoprotein H
chr20_+_7818289 Show fit	13.61	ENSRNOT00000042539	Ppard Links NCBI RGD Ensembl Show fit	peroxisome proliferator-activated receptor delta
chr1_+_85386470 Show fit	13.54	ENSRNOT00000093332 ENSRNOT00000044326	Plekhg2 Links NCBI RGD Ensembl Show fit	pleckstrin homology and RhoGEF domain containing G2
chr15_+_30827300 Show fit	13.54	ENSRNOT00000073533	AABR07017768.2 Links NCBI RGD Ensembl Show fit
chr20_-_4316715 Show fit	13.53	ENSRNOT00000031704	C4b Links NCBI RGD Ensembl Show fit	complement C4B (Chido blood group)
chr6_-_99576196 Show fit	13.36	ENSRNOT00000040565	RGD1562381 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S17
chr3_+_103866144 Show fit	13.32	ENSRNOT00000007688	NEWGENE_1582771 Links NCBI RGD Ensembl Show fit	katanin regulatory subunit B1 like 1
chr9_-_53732858 Show fit	13.11	ENSRNOT00000029204	Nemp2 Links NCBI RGD Ensembl Show fit	nuclear envelope integral membrane protein 2
chr1_-_101131012 Show fit	13.10	ENSRNOT00000082283 ENSRNOT00000093498 ENSRNOT00000093559	Flt3lg Links NCBI RGD Ensembl Show fit Rpl13a Links NCBI RGD Ensembl Show fit	fms-related tyrosine kinase 3 ligand ribosomal protein L13A
chr1_-_21586910 Show fit	12.79	ENSRNOT00000032424	Med23 Links NCBI RGD Ensembl Show fit	mediator complex subunit 23
chr1_+_44019059 Show fit	12.76	ENSRNOT00000065733 ENSRNOT00000083425	Scaf8 Links NCBI RGD Ensembl Show fit	SR-related CTD-associated factor 8
chr12_+_23151180 Show fit	12.76	ENSRNOT00000059486	Cux1 Links NCBI RGD Ensembl Show fit	cut-like homeobox 1
chr3_-_52998650 Show fit	12.53	ENSRNOT00000009988	RGD1560831 Links NCBI RGD Ensembl Show fit	similar to 40S ribosomal protein S3
chr11_+_77815181 Show fit	12.51	ENSRNOT00000002640	Cldn1 Links NCBI RGD Ensembl Show fit	claudin 1
chr12_+_660011 Show fit	12.51	ENSRNOT00000040830	Pds5b Links NCBI RGD Ensembl Show fit	PDS5 cohesin associated factor B
chr10_-_85049331 Show fit	12.46	ENSRNOT00000012538	Tbx21 Links NCBI RGD Ensembl Show fit	T-box 21
chr12_+_13716596 Show fit	12.28	ENSRNOT00000080216	Actb Links NCBI RGD Ensembl Show fit	actin, beta
chr15_+_31141142 Show fit	12.20	ENSRNOT00000060304	LOC103693854 Links NCBI RGD Ensembl Show fit	uncharacterized LOC103693854
chr16_+_19767264 Show fit	12.18	ENSRNOT00000051802 ENSRNOT00000092073	Ocel1 Links NCBI RGD Ensembl Show fit	occludin/ELL domain containing 1
chr3_+_147772165 Show fit	12.07	ENSRNOT00000008713	Tbc1d20 Links NCBI RGD Ensembl Show fit	TBC1 domain family, member 20
chr6_-_128989812 Show fit	11.99	ENSRNOT00000085943	LOC100909439 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box protein 2-like
chr1_-_220867815 Show fit	11.77	ENSRNOT00000028015	Mus81 Links NCBI RGD Ensembl Show fit	MUS81 structure-specific endonuclease subunit
chr9_+_81402124 Show fit	11.73	ENSRNOT00000046019	Rufy4 Links NCBI RGD Ensembl Show fit	RUN and FYVE domain containing 4
chr1_+_40529045 Show fit	11.70	ENSRNOT00000026564	Mthfd1l Links NCBI RGD Ensembl Show fit	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
chr15_+_19429508 Show fit	11.64	ENSRNOT00000047113	LOC100361240 Links NCBI RGD Ensembl Show fit	ribosomal protein S10-like
chr10_+_13084304 Show fit	11.59	ENSRNOT00000066310	RGD1561157 Links NCBI RGD Ensembl Show fit	RGD1561157
chr3_-_83335960 Show fit	11.52	ENSRNOT00000013914	Api5 Links NCBI RGD Ensembl Show fit	apoptosis inhibitor 5

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
23.0	69.0	GO:1900126	negative regulation of hyaluronan biosynthetic process(GO:1900126)
17.2	51.5	GO:0046967	antigen processing and presentation of exogenous peptide antigen via MHC class Ib(GO:0002477) antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent(GO:0002481) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway(GO:0002488) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent(GO:0002489) positive regulation of antigen processing and presentation of peptide antigen(GO:0002585) regulation of antigen processing and presentation of peptide antigen via MHC class I(GO:0002589) cytosol to ER transport(GO:0046967) peptide antigen transport(GO:0046968)
10.8	54.1	GO:0002483	antigen processing and presentation of endogenous peptide antigen(GO:0002483) antigen processing and presentation of endogenous peptide antigen via MHC class I(GO:0019885)
10.7	32.2	GO:0002458	peripheral T cell tolerance induction(GO:0002458) peripheral tolerance induction(GO:0002465) regulation of thymocyte migration(GO:2000410)
10.3	30.8	GO:1903630	regulation of aminoacyl-tRNA ligase activity(GO:1903630)
9.4	47.2	GO:0060741	prostate gland stromal morphogenesis(GO:0060741)
9.2	18.4	GO:0002583	regulation of antigen processing and presentation of peptide antigen(GO:0002583) negative regulation of antigen processing and presentation of peptide antigen(GO:0002584) regulation of antigen processing and presentation of peptide antigen via MHC class II(GO:0002586)
9.0	36.1	GO:2000813	negative regulation of barbed-end actin filament capping(GO:2000813)
8.4	33.5	GO:0090290	positive regulation of osteoclast proliferation(GO:0090290)
8.0	24.1	GO:0002380	immunoglobulin secretion involved in immune response(GO:0002380)
7.2	21.7	GO:2000424	regulation of eosinophil chemotaxis(GO:2000422) positive regulation of eosinophil chemotaxis(GO:2000424)
7.1	42.3	GO:0042997	negative regulation of low-density lipoprotein particle clearance(GO:0010989) negative regulation of Golgi to plasma membrane protein transport(GO:0042997)
7.0	7.0	GO:0002578	negative regulation of antigen processing and presentation(GO:0002578) regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002580) negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002581)
6.9	27.6	GO:0071226	peripheral B cell selection(GO:0002343) B cell affinity maturation(GO:0002344) cellular response to molecule of fungal origin(GO:0071226)
6.2	18.7	GO:1904211	membrane protein proteolysis involved in retrograde protein transport, ER to cytosol(GO:1904211)
6.1	30.6	GO:0032792	negative regulation of CREB transcription factor activity(GO:0032792)
5.8	29.0	GO:0000727	double-strand break repair via break-induced replication(GO:0000727)
5.8	23.0	GO:0000707	meiotic DNA recombinase assembly(GO:0000707)
5.7	22.9	GO:2000318	positive regulation of T-helper 17 type immune response(GO:2000318)
5.7	17.2	GO:1902445	regulation of mitochondrial membrane permeability involved in programmed necrotic cell death(GO:1902445)
5.5	65.6	GO:0051639	actin filament network formation(GO:0051639)
5.4	16.3	GO:0060489	orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060488) planar dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060489) lateral sprouting involved in lung morphogenesis(GO:0060490)
5.3	21.2	GO:0006369	termination of RNA polymerase II transcription(GO:0006369)
5.2	15.7	GO:0010847	MAPK import into nucleus(GO:0000189) regulation of chromatin assembly(GO:0010847) positive regulation of chromatin assembly or disassembly(GO:0045799)
5.1	15.2	GO:0071733	transcriptional activation by promoter-enhancer looping(GO:0071733) regulation of estrogen receptor binding(GO:0071898) negative regulation of estrogen receptor binding(GO:0071899) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
5.0	15.1	GO:1902167	positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator(GO:1902167)
5.0	20.0	GO:0009223	pyrimidine deoxyribonucleotide catabolic process(GO:0009223)
4.5	22.6	GO:0071557	histone H3-K27 demethylation(GO:0071557)
4.4	26.5	GO:0002399	MHC class II protein complex assembly(GO:0002399) peptide antigen assembly with MHC class II protein complex(GO:0002503)
4.3	12.8	GO:2000409	positive regulation of T cell extravasation(GO:2000409)
4.2	12.5	GO:1903348	positive regulation of bicellular tight junction assembly(GO:1903348) response to butyrate(GO:1903544)
4.0	12.1	GO:1902953	positive regulation of ER to Golgi vesicle-mediated transport(GO:1902953)
4.0	7.9	GO:0006407	rRNA export from nucleus(GO:0006407)
3.9	11.7	GO:0015942	formate metabolic process(GO:0015942)
3.8	19.2	GO:1990918	meiotic DNA double-strand break processing(GO:0000706) double-strand break repair involved in meiotic recombination(GO:1990918)
3.7	25.8	GO:2000143	regulation of transposition(GO:0010528) negative regulation of transposition(GO:0010529) negative regulation of DNA-templated transcription, initiation(GO:2000143)
3.5	10.6	GO:2000359	regulation of binding of sperm to zona pellucida(GO:2000359) negative regulation of binding of sperm to zona pellucida(GO:2000360)
3.5	38.4	GO:0090649	response to oxygen-glucose deprivation(GO:0090649) cellular response to oxygen-glucose deprivation(GO:0090650)
3.4	10.2	GO:1990167	protein K27-linked deubiquitination(GO:1990167)
3.4	10.1	GO:0032298	positive regulation of DNA-dependent DNA replication initiation(GO:0032298)
3.3	30.0	GO:2000270	negative regulation of fibroblast apoptotic process(GO:2000270)
3.3	16.5	GO:1904401	cellular response to Thyroid stimulating hormone(GO:1904401)
3.3	19.7	GO:0019919	peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919)
3.3	19.6	GO:2000348	regulation of CD40 signaling pathway(GO:2000348)
3.2	9.7	GO:1904569	regulation of selenocysteine incorporation(GO:1904569)
3.1	24.7	GO:1903232	melanosome assembly(GO:1903232)
3.0	3.0	GO:0035711	T-helper 1 cell activation(GO:0035711)
2.7	2.7	GO:0046078	dUMP metabolic process(GO:0046078)
2.6	44.5	GO:0002504	antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002504)
2.6	7.8	GO:0021898	regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment(GO:0021882) commitment of multipotent stem cells to neuronal lineage in forebrain(GO:0021898)
2.6	7.8	GO:0090164	asymmetric Golgi ribbon formation(GO:0090164)
2.6	35.8	GO:0019985	translesion synthesis(GO:0019985)
2.5	10.1	GO:1904690	regulation of cap-independent translational initiation(GO:1903677) positive regulation of cap-independent translational initiation(GO:1903679) regulation of cytoplasmic translational initiation(GO:1904688) positive regulation of cytoplasmic translational initiation(GO:1904690)
2.5	9.9	GO:0034760	regulation of iron ion transmembrane transport(GO:0034759) negative regulation of iron ion transmembrane transport(GO:0034760) regulation of cytochrome-c oxidase activity(GO:1904959)
2.4	7.3	GO:1901165	positive regulation of trophoblast cell migration(GO:1901165)
2.3	18.7	GO:2000288	positive regulation of myoblast proliferation(GO:2000288)
2.3	13.8	GO:0035331	negative regulation of hippo signaling(GO:0035331)
2.3	9.1	GO:0090625	mRNA cleavage involved in gene silencing by siRNA(GO:0090625)
2.2	15.7	GO:0061484	hematopoietic stem cell homeostasis(GO:0061484) negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:2001268)
2.2	4.5	GO:0060800	regulation of cell differentiation involved in embryonic placenta development(GO:0060800)
2.1	6.2	GO:0098749	cerebellar neuron development(GO:0098749)
1.9	9.7	GO:0016095	polyprenol catabolic process(GO:0016095)
1.9	19.4	GO:0010891	negative regulation of sequestering of triglyceride(GO:0010891) positive regulation of triglyceride catabolic process(GO:0010898)
1.8	7.2	GO:0051958	methotrexate transport(GO:0051958)
1.8	23.1	GO:0090178	regulation of establishment of planar polarity involved in neural tube closure(GO:0090178)
1.7	13.5	GO:2000427	positive regulation of apoptotic cell clearance(GO:2000427)
1.6	8.1	GO:0006030	chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032)
1.5	4.5	GO:0010909	regulation of heparan sulfate proteoglycan biosynthetic process(GO:0010908) positive regulation of heparan sulfate proteoglycan biosynthetic process(GO:0010909)
1.5	16.3	GO:0060040	retinal bipolar neuron differentiation(GO:0060040)
1.5	8.8	GO:0046602	regulation of mitotic centrosome separation(GO:0046602)
1.5	16.1	GO:0045351	type I interferon biosynthetic process(GO:0045351)
1.5	16.1	GO:0033523	histone H2B ubiquitination(GO:0033523)
1.5	4.4	GO:0006990	positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) N-terminal peptidyl-lysine acetylation(GO:0018076)
1.4	5.8	GO:0060431	primary lung bud formation(GO:0060431)
1.4	8.6	GO:2001271	negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:2001271)
1.4	14.0	GO:0060330	regulation of response to interferon-gamma(GO:0060330)
1.3	49.4	GO:0035458	cellular response to interferon-beta(GO:0035458)
1.3	31.5	GO:2000193	positive regulation of fatty acid transport(GO:2000193)
1.2	11.2	GO:0032876	negative regulation of DNA endoreduplication(GO:0032876)
1.2	9.9	GO:0009912	auditory receptor cell fate commitment(GO:0009912) inner ear receptor cell fate commitment(GO:0060120)
1.2	24.3	GO:0033169	histone H3-K9 demethylation(GO:0033169)
1.2	27.6	GO:0035329	hippo signaling(GO:0035329)
1.2	14.3	GO:0090231	regulation of spindle checkpoint(GO:0090231) regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090266) regulation of mitotic spindle checkpoint(GO:1903504)
1.2	10.7	GO:1902414	protein localization to cell junction(GO:1902414)
1.1	12.5	GO:0048304	positive regulation of isotype switching to IgG isotypes(GO:0048304)
1.1	9.1	GO:0033299	secretion of lysosomal enzymes(GO:0033299)
1.1	26.8	GO:0006270	DNA replication initiation(GO:0006270)
1.1	22.9	GO:0060396	growth hormone receptor signaling pathway(GO:0060396)
1.1	5.4	GO:0008295	spermidine biosynthetic process(GO:0008295)
1.1	5.4	GO:2000327	regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000325) positive regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000327)
1.1	29.8	GO:0045745	positive regulation of G-protein coupled receptor protein signaling pathway(GO:0045745)
1.1	9.5	GO:0048387	negative regulation of retinoic acid receptor signaling pathway(GO:0048387)
1.0	9.4	GO:0000050	urea cycle(GO:0000050)
1.0	6.2	GO:0010825	positive regulation of centrosome duplication(GO:0010825) positive regulation of centrosome cycle(GO:0046607)
1.0	6.0	GO:0032202	telomere assembly(GO:0032202)
1.0	6.7	GO:0006297	nucleotide-excision repair, DNA gap filling(GO:0006297)
1.0	3.8	GO:1904430	negative regulation of t-circle formation(GO:1904430)
0.9	3.8	GO:0032020	ISG15-protein conjugation(GO:0032020)
0.9	9.0	GO:0035372	protein localization to microtubule(GO:0035372)
0.9	9.0	GO:0010457	centriole-centriole cohesion(GO:0010457)
0.9	0.9	GO:0006649	phospholipid transfer to membrane(GO:0006649)
0.9	5.2	GO:0034454	microtubule anchoring at centrosome(GO:0034454)
0.9	2.6	GO:0071461	cellular response to redox state(GO:0071461)
0.8	27.7	GO:0006303	double-strand break repair via nonhomologous end joining(GO:0006303)
0.8	2.5	GO:0018283	metal incorporation into metallo-sulfur cluster(GO:0018282) iron incorporation into metallo-sulfur cluster(GO:0018283)
0.8	10.4	GO:1902018	negative regulation of cilium assembly(GO:1902018)
0.8	18.7	GO:0006471	protein ADP-ribosylation(GO:0006471)
0.8	45.0	GO:0002181	cytoplasmic translation(GO:0002181)
0.8	1.5	GO:0000957	mitochondrial RNA catabolic process(GO:0000957) regulation of mitochondrial RNA catabolic process(GO:0000960)
0.7	3.0	GO:0032919	spermine acetylation(GO:0032919)
0.7	19.1	GO:0045662	negative regulation of myoblast differentiation(GO:0045662)
0.7	9.4	GO:0032957	inositol trisphosphate metabolic process(GO:0032957)
0.7	7.1	GO:0071985	multivesicular body sorting pathway(GO:0071985)
0.7	37.1	GO:0043551	regulation of phosphatidylinositol 3-kinase activity(GO:0043551)
0.7	82.1	GO:0035335	peptidyl-tyrosine dephosphorylation(GO:0035335)
0.7	4.7	GO:1901838	positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter(GO:1901838)
0.6	3.1	GO:0042270	protection from natural killer cell mediated cytotoxicity(GO:0042270)
0.6	9.7	GO:0051599	response to hydrostatic pressure(GO:0051599)
0.6	3.0	GO:0071630	nucleus-associated proteasomal ubiquitin-dependent protein catabolic process(GO:0071630)
0.6	5.9	GO:0034472	snRNA 3'-end processing(GO:0034472)
0.6	5.1	GO:0006335	DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.6	12.5	GO:0007064	mitotic sister chromatid cohesion(GO:0007064)
0.6	5.6	GO:0071481	cellular response to X-ray(GO:0071481)
0.6	31.2	GO:0051290	protein heterotetramerization(GO:0051290)
0.6	6.1	GO:0071712	ER-associated misfolded protein catabolic process(GO:0071712)
0.6	12.2	GO:0000301	retrograde transport, vesicle recycling within Golgi(GO:0000301)
0.5	2.0	GO:0071955	recycling endosome to Golgi transport(GO:0071955)
0.5	13.4	GO:0000028	ribosomal small subunit assembly(GO:0000028)
0.5	16.0	GO:0000387	spliceosomal snRNP assembly(GO:0000387)
0.5	14.0	GO:0031571	mitotic G1 DNA damage checkpoint(GO:0031571) G1 DNA damage checkpoint(GO:0044783)
0.4	2.2	GO:0097039	protein linear polyubiquitination(GO:0097039)
0.4	2.2	GO:0036233	glycine import(GO:0036233)
0.4	2.2	GO:0060591	chondroblast differentiation(GO:0060591)
0.4	2.1	GO:1903899	positive regulation of PERK-mediated unfolded protein response(GO:1903899)
0.4	13.2	GO:0032508	DNA duplex unwinding(GO:0032508)
0.4	5.4	GO:0051085	chaperone mediated protein folding requiring cofactor(GO:0051085)
0.4	4.9	GO:0007289	spermatid nucleus differentiation(GO:0007289)
0.4	1.2	GO:0015015	heparan sulfate proteoglycan biosynthetic process, enzymatic modification(GO:0015015)
0.4	2.0	GO:0033625	positive regulation of integrin activation(GO:0033625)
0.4	5.1	GO:0007171	activation of transmembrane receptor protein tyrosine kinase activity(GO:0007171)
0.4	24.7	GO:1902017	regulation of cilium assembly(GO:1902017)
0.4	4.5	GO:0022615	protein to membrane docking(GO:0022615)
0.4	1.8	GO:0071104	response to interleukin-9(GO:0071104)
0.4	1.8	GO:0048386	positive regulation of retinoic acid receptor signaling pathway(GO:0048386)
0.3	2.3	GO:0036089	cleavage furrow formation(GO:0036089)
0.3	12.3	GO:0043044	ATP-dependent chromatin remodeling(GO:0043044)
0.3	2.6	GO:0015886	heme transport(GO:0015886)
0.3	14.4	GO:0006360	transcription from RNA polymerase I promoter(GO:0006360)
0.3	10.0	GO:0006958	complement activation, classical pathway(GO:0006958)
0.3	1.9	GO:0016584	nucleosome positioning(GO:0016584)
0.3	1.9	GO:0015860	purine nucleoside transmembrane transport(GO:0015860)
0.3	0.9	GO:2001137	positive regulation of endocytic recycling(GO:2001137)
0.3	4.3	GO:0019184	nonribosomal peptide biosynthetic process(GO:0019184)
0.3	1.8	GO:0045078	interferon-gamma biosynthetic process(GO:0042095) regulation of interferon-gamma biosynthetic process(GO:0045072) positive regulation of interferon-gamma biosynthetic process(GO:0045078)
0.3	14.9	GO:0006904	vesicle docking involved in exocytosis(GO:0006904)
0.3	1.7	GO:0016191	synaptic vesicle uncoating(GO:0016191)
0.3	8.4	GO:0000578	embryonic axis specification(GO:0000578)
0.3	8.6	GO:0060065	uterus development(GO:0060065)
0.3	6.2	GO:0051973	positive regulation of telomerase activity(GO:0051973)
0.3	1.9	GO:0090073	positive regulation of protein homodimerization activity(GO:0090073)
0.3	5.5	GO:0048384	retinoic acid receptor signaling pathway(GO:0048384)
0.3	4.1	GO:2001241	positive regulation of extrinsic apoptotic signaling pathway in absence of ligand(GO:2001241)
0.3	1.5	GO:0097490	trunk segmentation(GO:0035290) trunk neural crest cell migration(GO:0036484) ventral trunk neural crest cell migration(GO:0036486) sympathetic neuron projection extension(GO:0097490) sympathetic neuron projection guidance(GO:0097491)
0.3	3.3	GO:0071420	cellular response to histamine(GO:0071420)
0.2	2.0	GO:0000055	ribosomal large subunit export from nucleus(GO:0000055)
0.2	6.6	GO:0002717	positive regulation of natural killer cell mediated immunity(GO:0002717) positive regulation of natural killer cell mediated cytotoxicity(GO:0045954)
0.2	20.6	GO:0048144	fibroblast proliferation(GO:0048144)
0.2	14.1	GO:0071277	cellular response to calcium ion(GO:0071277)
0.2	1.3	GO:0072513	positive regulation of secondary heart field cardioblast proliferation(GO:0072513)
0.2	6.1	GO:0006284	base-excision repair(GO:0006284)
0.2	3.8	GO:0030825	positive regulation of cGMP metabolic process(GO:0030825) positive regulation of cGMP biosynthetic process(GO:0030828)
0.2	3.5	GO:0045475	locomotor rhythm(GO:0045475)
0.2	2.4	GO:0007250	activation of NF-kappaB-inducing kinase activity(GO:0007250)
0.2	1.8	GO:0021942	radial glia guided migration of Purkinje cell(GO:0021942)
0.2	2.5	GO:0051014	actin filament severing(GO:0051014)
0.2	5.5	GO:0070207	protein homotrimerization(GO:0070207)
0.2	5.8	GO:0033119	negative regulation of RNA splicing(GO:0033119)
0.2	3.3	GO:0019433	triglyceride catabolic process(GO:0019433)
0.2	1.8	GO:0097240	meiotic telomere tethering at nuclear periphery(GO:0044821) meiotic attachment of telomere to nuclear envelope(GO:0070197) chromosome attachment to the nuclear envelope(GO:0097240)
0.2	2.0	GO:0007210	serotonin receptor signaling pathway(GO:0007210)
0.2	14.4	GO:0045727	positive regulation of translation(GO:0045727)
0.2	3.1	GO:0043153	entrainment of circadian clock by photoperiod(GO:0043153)
0.2	10.5	GO:0006338	chromatin remodeling(GO:0006338)
0.2	6.0	GO:0032456	endocytic recycling(GO:0032456)
0.1	7.5	GO:0006611	protein export from nucleus(GO:0006611)
0.1	1.5	GO:0035855	megakaryocyte development(GO:0035855)
0.1	2.2	GO:0042659	regulation of cell fate specification(GO:0042659)
0.1	13.0	GO:0051092	positive regulation of NF-kappaB transcription factor activity(GO:0051092)
0.1	1.2	GO:0048820	hair follicle maturation(GO:0048820)
0.1	5.1	GO:0060976	coronary vasculature development(GO:0060976)
0.1	1.5	GO:0032515	negative regulation of phosphoprotein phosphatase activity(GO:0032515)
0.1	0.8	GO:0051694	pointed-end actin filament capping(GO:0051694)
0.1	0.5	GO:0033234	negative regulation of protein sumoylation(GO:0033234)
0.1	3.3	GO:0000413	protein peptidyl-prolyl isomerization(GO:0000413)
0.1	4.1	GO:0035019	somatic stem cell population maintenance(GO:0035019)
0.1	4.8	GO:0000380	alternative mRNA splicing, via spliceosome(GO:0000380)
0.1	4.6	GO:0061077	chaperone-mediated protein folding(GO:0061077)
0.1	1.6	GO:0055070	copper ion homeostasis(GO:0055070)
0.1	5.3	GO:0006334	nucleosome assembly(GO:0006334)
0.1	1.4	GO:1902230	negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902230)
0.1	7.0	GO:0030317	sperm motility(GO:0030317)
0.1	2.2	GO:2001238	positive regulation of extrinsic apoptotic signaling pathway(GO:2001238)
0.1	2.7	GO:0007622	rhythmic behavior(GO:0007622) circadian behavior(GO:0048512)
0.1	0.5	GO:0006228	UTP biosynthetic process(GO:0006228)
0.1	13.1	GO:0006417	regulation of translation(GO:0006417)
0.1	4.3	GO:0006635	fatty acid beta-oxidation(GO:0006635)
0.1	2.7	GO:0090280	positive regulation of calcium ion import(GO:0090280)
0.1	5.8	GO:0051091	positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1	8.8	GO:0051607	defense response to virus(GO:0051607)
0.1	2.8	GO:0046686	response to cadmium ion(GO:0046686)
0.1	2.1	GO:0021762	substantia nigra development(GO:0021762)
0.1	8.4	GO:0045471	response to ethanol(GO:0045471)
0.0	10.0	GO:0008380	RNA splicing(GO:0008380)
0.0	1.4	GO:0007131	reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0	1.4	GO:0034629	cellular protein complex localization(GO:0034629)
0.0	0.1	GO:0061304	retinal blood vessel morphogenesis(GO:0061304)
0.0	2.7	GO:0006487	protein N-linked glycosylation(GO:0006487)
0.0	1.4	GO:0001510	RNA methylation(GO:0001510)
0.0	0.1	GO:1900620	acetylcholine biosynthetic process(GO:0008292) acetate ester biosynthetic process(GO:1900620)
0.0	0.7	GO:0031639	plasminogen activation(GO:0031639)
0.0	0.3	GO:0009083	branched-chain amino acid catabolic process(GO:0009083)
0.0	1.1	GO:0007173	epidermal growth factor receptor signaling pathway(GO:0007173)
0.0	0.4	GO:0030517	negative regulation of axon extension(GO:0030517)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
15.1	105.6	GO:0042825	TAP complex(GO:0042825)
12.4	37.1	GO:0005944	phosphatidylinositol 3-kinase complex, class IB(GO:0005944)
7.9	31.6	GO:0020005	symbiont-containing vacuole membrane(GO:0020005)
6.8	34.2	GO:0031465	Cul4B-RING E3 ubiquitin ligase complex(GO:0031465)
6.8	20.3	GO:0032807	DNA ligase IV complex(GO:0032807)
5.8	17.3	GO:0000811	GINS complex(GO:0000811)
5.4	16.3	GO:0060187	cell pole(GO:0060187)
4.6	74.1	GO:0042613	MHC class II protein complex(GO:0042613)
4.6	23.0	GO:0033063	Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
4.1	12.4	GO:0036488	CHOP-C/EBP complex(GO:0036488)
4.1	24.7	GO:0031904	endosome lumen(GO:0031904)
3.7	11.0	GO:0071149	TEAD-2-YAP complex(GO:0071149)
3.6	36.1	GO:0044354	F-actin capping protein complex(GO:0008290) pinosome(GO:0044352) macropinosome(GO:0044354)
3.4	10.1	GO:0097124	cyclin A2-CDK2 complex(GO:0097124)
3.2	38.4	GO:0016600	flotillin complex(GO:0016600)
3.1	25.1	GO:0031298	replication fork protection complex(GO:0031298)
2.9	11.8	GO:0048476	Holliday junction resolvase complex(GO:0048476)
2.7	18.7	GO:0071556	integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553)
2.6	42.1	GO:0005751	mitochondrial respiratory chain complex IV(GO:0005751)
2.5	15.2	GO:0097255	R2TP complex(GO:0097255)
2.3	16.1	GO:0016593	Cdc73/Paf1 complex(GO:0016593)
2.1	8.6	GO:0002947	tumor necrosis factor receptor superfamily complex(GO:0002947)
1.9	54.1	GO:0001891	phagocytic cup(GO:0001891)
1.9	25.1	GO:0017101	aminoacyl-tRNA synthetase multienzyme complex(GO:0017101)
1.9	3.8	GO:0005958	DNA-dependent protein kinase-DNA ligase 4 complex(GO:0005958)
1.9	13.1	GO:0097452	GAIT complex(GO:0097452)
1.7	22.6	GO:0044666	MLL3/4 complex(GO:0044666)
1.7	20.9	GO:0035631	CD40 receptor complex(GO:0035631)
1.6	22.8	GO:0031332	RISC complex(GO:0016442) RNAi effector complex(GO:0031332)
1.6	11.0	GO:0090571	RNA polymerase II transcription repressor complex(GO:0090571)
1.6	15.7	GO:0044615	nuclear pore nuclear basket(GO:0044615)
1.5	12.3	GO:0097433	dense body(GO:0097433)
1.5	15.3	GO:0032009	early phagosome(GO:0032009)
1.4	5.6	GO:0032777	Piccolo NuA4 histone acetyltransferase complex(GO:0032777)
1.3	6.7	GO:0043625	delta DNA polymerase complex(GO:0043625)
1.2	14.4	GO:0005736	DNA-directed RNA polymerase I complex(GO:0005736)
1.0	27.6	GO:0042629	mast cell granule(GO:0042629)
1.0	20.4	GO:0031233	intrinsic component of external side of plasma membrane(GO:0031233)
0.9	4.7	GO:0034455	t-UTP complex(GO:0034455)
0.9	8.3	GO:0008541	proteasome regulatory particle, lid subcomplex(GO:0008541)
0.9	7.2	GO:0016589	NURF complex(GO:0016589)
0.9	19.6	GO:0030057	desmosome(GO:0030057)
0.9	42.8	GO:0030173	integral component of Golgi membrane(GO:0030173)
0.9	84.0	GO:0022625	cytosolic large ribosomal subunit(GO:0022625)
0.9	7.0	GO:0005577	fibrinogen complex(GO:0005577)
0.8	13.5	GO:0044217	other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.8	22.2	GO:0030125	clathrin vesicle coat(GO:0030125)
0.8	4.5	GO:0030681	nucleolar ribonuclease P complex(GO:0005655) ribonuclease P complex(GO:0030677) multimeric ribonuclease P complex(GO:0030681)
0.8	4.5	GO:0070820	tertiary granule(GO:0070820)
0.7	2.2	GO:0031680	G-protein beta/gamma-subunit complex(GO:0031680)
0.7	25.5	GO:0001772	immunological synapse(GO:0001772)
0.7	74.4	GO:0005902	microvillus(GO:0005902)
0.7	49.2	GO:0022627	cytosolic small ribosomal subunit(GO:0022627)
0.7	7.8	GO:0071564	npBAF complex(GO:0071564)
0.6	1.9	GO:0031010	ISWI-type complex(GO:0031010)
0.6	8.8	GO:0030127	COPII vesicle coat(GO:0030127)
0.6	4.3	GO:0016461	unconventional myosin complex(GO:0016461)
0.6	17.2	GO:0005753	mitochondrial proton-transporting ATP synthase complex(GO:0005753)
0.6	6.1	GO:0034663	endoplasmic reticulum chaperone complex(GO:0034663)
0.5	9.7	GO:0016010	dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665)
0.5	5.0	GO:0032797	SMN complex(GO:0032797)
0.4	8.8	GO:0000242	pericentriolar material(GO:0000242)
0.4	3.2	GO:0071541	eukaryotic 43S preinitiation complex(GO:0016282) eukaryotic 48S preinitiation complex(GO:0033290) eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.4	2.3	GO:0071817	MMXD complex(GO:0071817)
0.4	4.9	GO:0030914	STAGA complex(GO:0030914)
0.4	5.9	GO:0032039	integrator complex(GO:0032039)
0.4	3.6	GO:0070187	telosome(GO:0070187)
0.3	7.6	GO:0001673	male germ cell nucleus(GO:0001673)
0.3	11.6	GO:0060077	inhibitory synapse(GO:0060077)
0.3	1.2	GO:0034991	nuclear meiotic cohesin complex(GO:0034991)
0.3	47.1	GO:0005840	ribosome(GO:0005840)
0.3	20.2	GO:0005811	lipid particle(GO:0005811)
0.3	12.6	GO:0016592	mediator complex(GO:0016592)
0.3	1.8	GO:0031466	Cul5-RING ubiquitin ligase complex(GO:0031466)
0.2	47.3	GO:0005681	spliceosomal complex(GO:0005681)
0.2	1.9	GO:0031464	Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.2	2.7	GO:0090544	BAF-type complex(GO:0090544)
0.2	15.2	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.2	11.4	GO:0016328	lateral plasma membrane(GO:0016328)
0.2	6.9	GO:0005844	polysome(GO:0005844)
0.2	2.5	GO:0030665	clathrin-coated vesicle membrane(GO:0030665)
0.2	17.5	GO:0000781	chromosome, telomeric region(GO:0000781)
0.2	1.5	GO:0031209	SCAR complex(GO:0031209)
0.2	88.1	GO:0000785	chromatin(GO:0000785)
0.2	7.1	GO:0005637	nuclear inner membrane(GO:0005637)
0.2	1.4	GO:0061700	GATOR2 complex(GO:0061700)
0.1	15.2	GO:0005814	centriole(GO:0005814)
0.1	9.0	GO:0072686	mitotic spindle(GO:0072686)
0.1	0.5	GO:0034774	secretory granule lumen(GO:0034774)
0.1	7.8	GO:0032587	ruffle membrane(GO:0032587)
0.1	11.1	GO:0000932	cytoplasmic mRNA processing body(GO:0000932)
0.1	5.4	GO:0005788	endoplasmic reticulum lumen(GO:0005788)
0.1	2.0	GO:0030687	preribosome, large subunit precursor(GO:0030687)
0.1	2.5	GO:0015030	Cajal body(GO:0015030)
0.1	4.5	GO:0001726	ruffle(GO:0001726)
0.1	0.3	GO:0005947	mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947)
0.1	4.7	GO:0042641	actomyosin(GO:0042641)
0.1	43.0	GO:0005730	nucleolus(GO:0005730)
0.1	1.7	GO:0002102	podosome(GO:0002102)
0.1	1.4	GO:0046658	anchored component of plasma membrane(GO:0046658)
0.0	0.8	GO:0005865	striated muscle thin filament(GO:0005865)
0.0	1.8	GO:0016605	PML body(GO:0016605)
0.0	0.9	GO:0045171	intercellular bridge(GO:0045171)
0.0	1.9	GO:0005776	autophagosome(GO:0005776)
0.0	0.2	GO:0072669	tRNA-splicing ligase complex(GO:0072669)
0.0	0.1	GO:0005606	laminin-1 complex(GO:0005606)
0.0	1.2	GO:0045178	basal part of cell(GO:0045178)
0.0	2.9	GO:0005802	trans-Golgi network(GO:0005802)
0.0	0.6	GO:0035097	histone methyltransferase complex(GO:0035097)
0.0	0.2	GO:0043240	Fanconi anaemia nuclear complex(GO:0043240)
0.0	3.6	GO:0045121	membrane raft(GO:0045121) membrane microdomain(GO:0098857)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
21.1	105.6	GO:0015440	peptide-transporting ATPase activity(GO:0015440)
13.8	69.0	GO:0034714	type III transforming growth factor beta receptor binding(GO:0034714)
8.2	24.7	GO:0035651	AP-3 adaptor complex binding(GO:0035651)
7.8	31.2	GO:0005087	Ran guanyl-nucleotide exchange factor activity(GO:0005087)
7.1	42.6	GO:0004726	non-membrane spanning protein tyrosine phosphatase activity(GO:0004726)
6.2	37.1	GO:0046935	1-phosphatidylinositol-3-kinase regulator activity(GO:0046935)
4.8	19.2	GO:0061505	DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
4.7	47.2	GO:0003680	AT DNA binding(GO:0003680)
3.9	15.5	GO:0071936	coreceptor activity involved in Wnt signaling pathway(GO:0071936)
3.8	23.0	GO:0000150	recombinase activity(GO:0000150)
3.4	30.8	GO:0055104	ligase inhibitor activity(GO:0055104) ubiquitin ligase inhibitor activity(GO:1990948)
3.3	19.7	GO:0035242	protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
3.1	53.2	GO:0036312	phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312)
3.1	18.7	GO:0042500	aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
3.1	9.2	GO:0004839	ubiquitin activating enzyme activity(GO:0004839)
3.1	30.6	GO:0008140	cAMP response element binding protein binding(GO:0008140)
3.0	9.1	GO:0003976	UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity(GO:0003976)
3.0	20.9	GO:0001849	complement component C1q binding(GO:0001849)
2.5	15.2	GO:0043141	ATP-dependent 5'-3' DNA helicase activity(GO:0043141)
2.5	20.1	GO:0003956	NAD(P)+-protein-arginine ADP-ribosyltransferase activity(GO:0003956)
2.5	20.0	GO:0032552	deoxyribonucleotide binding(GO:0032552)
2.5	17.2	GO:0016018	cyclosporin A binding(GO:0016018)
2.4	9.7	GO:0047751	3-oxo-5-alpha-steroid 4-dehydrogenase activity(GO:0003865) cholestenone 5-alpha-reductase activity(GO:0047751)
2.3	11.7	GO:0004488	methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
2.3	18.5	GO:0034046	poly(G) binding(GO:0034046)
2.1	44.9	GO:0023026	MHC class II protein complex binding(GO:0023026)
2.0	9.9	GO:0032767	copper-exporting ATPase activity(GO:0004008) copper-dependent protein binding(GO:0032767) copper-transporting ATPase activity(GO:0043682)
1.9	26.8	GO:0003688	DNA replication origin binding(GO:0003688)
1.9	7.5	GO:0008138	protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
1.8	56.7	GO:0070064	proline-rich region binding(GO:0070064)
1.8	7.2	GO:0015350	methotrexate transporter activity(GO:0015350)
1.7	15.7	GO:0043495	protein anchor(GO:0043495)
1.6	9.7	GO:0035368	selenocysteine insertion sequence binding(GO:0035368)
1.6	14.4	GO:0001054	RNA polymerase I activity(GO:0001054)
1.6	9.4	GO:0001013	RNA polymerase I regulatory region DNA binding(GO:0001013)
1.6	17.3	GO:0043138	3'-5' DNA helicase activity(GO:0043138)
1.5	6.1	GO:0000405	bubble DNA binding(GO:0000405)
1.4	10.1	GO:1990247	N6-methyladenosine-containing RNA binding(GO:1990247)
1.4	7.0	GO:0070052	collagen V binding(GO:0070052)
1.4	15.3	GO:0035325	Toll-like receptor binding(GO:0035325)
1.4	12.3	GO:0030957	Tat protein binding(GO:0030957)
1.3	8.1	GO:0004568	chitinase activity(GO:0004568)
1.3	39.9	GO:0004129	cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
1.3	11.8	GO:0048256	crossover junction endodeoxyribonuclease activity(GO:0008821) flap endonuclease activity(GO:0048256)
1.3	19.6	GO:0070182	DNA polymerase binding(GO:0070182)
1.3	37.9	GO:0043175	RNA polymerase core enzyme binding(GO:0043175)
1.3	3.8	GO:0042296	ISG15 transferase activity(GO:0042296)
1.3	20.1	GO:0051400	BH domain binding(GO:0051400)
1.2	6.1	GO:0004169	dolichyl-phosphate-mannose-protein mannosyltransferase activity(GO:0004169)
1.2	24.3	GO:0032454	histone demethylase activity (H3-K9 specific)(GO:0032454)
1.2	17.0	GO:0004003	ATP-dependent DNA helicase activity(GO:0004003)
1.2	14.0	GO:0001727	lipid kinase activity(GO:0001727)
1.2	5.8	GO:0052650	NADP-retinol dehydrogenase activity(GO:0052650)
1.1	22.9	GO:0004697	protein kinase C activity(GO:0004697)
1.1	22.6	GO:0004806	triglyceride lipase activity(GO:0004806)
1.0	5.1	GO:0030297	transmembrane receptor protein tyrosine kinase activator activity(GO:0030297)
1.0	20.9	GO:0031996	thioesterase binding(GO:0031996)
1.0	3.0	GO:0019809	spermidine binding(GO:0019809)
0.9	15.1	GO:0048027	mRNA 5'-UTR binding(GO:0048027)
0.9	9.1	GO:0051766	inositol trisphosphate kinase activity(GO:0051766)
0.9	3.4	GO:0061629	RNA polymerase II sequence-specific DNA binding transcription factor binding(GO:0061629)
0.8	3.4	GO:0030144	alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity(GO:0030144)
0.8	13.8	GO:0003993	acid phosphatase activity(GO:0003993)
0.8	3.8	GO:0008502	melatonin receptor activity(GO:0008502)
0.7	3.5	GO:0004977	melanocortin receptor activity(GO:0004977)
0.7	9.0	GO:0005522	profilin binding(GO:0005522)
0.7	33.3	GO:0045182	translation regulator activity(GO:0045182)
0.7	9.5	GO:0070410	co-SMAD binding(GO:0070410)
0.6	4.4	GO:0004468	lysine N-acetyltransferase activity, acting on acetyl phosphate as donor(GO:0004468)
0.6	11.0	GO:0001134	transcription factor activity, transcription factor recruiting(GO:0001134)
0.6	22.6	GO:0030331	estrogen receptor binding(GO:0030331)
0.6	12.5	GO:0003950	NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.6	10.7	GO:0005523	tropomyosin binding(GO:0005523)
0.6	149.6	GO:0003735	structural constituent of ribosome(GO:0003735)
0.6	13.6	GO:0036041	long-chain fatty acid binding(GO:0036041)
0.6	27.8	GO:0030374	ligand-dependent nuclear receptor transcription coactivator activity(GO:0030374)
0.6	7.8	GO:0047555	3',5'-cyclic-GMP phosphodiesterase activity(GO:0047555)
0.5	4.3	GO:0004300	enoyl-CoA hydratase activity(GO:0004300)
0.5	34.5	GO:0004004	RNA helicase activity(GO:0003724) ATP-dependent RNA helicase activity(GO:0004004) RNA-dependent ATPase activity(GO:0008186)
0.5	27.6	GO:0004715	non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.5	3.4	GO:0035375	zymogen binding(GO:0035375)
0.5	2.8	GO:0061133	endopeptidase activator activity(GO:0061133)
0.5	10.7	GO:0031435	mitogen-activated protein kinase kinase kinase binding(GO:0031435)
0.5	11.5	GO:0017134	fibroblast growth factor binding(GO:0017134)
0.5	10.1	GO:0035173	histone kinase activity(GO:0035173)
0.5	4.5	GO:0004526	ribonuclease P activity(GO:0004526)
0.4	15.7	GO:0048020	CCR chemokine receptor binding(GO:0048020)
0.4	32.3	GO:0000979	RNA polymerase II core promoter sequence-specific DNA binding(GO:0000979)
0.4	3.1	GO:0048273	mitogen-activated protein kinase p38 binding(GO:0048273)
0.4	9.9	GO:0005112	Notch binding(GO:0005112)
0.4	2.5	GO:0016530	metallochaperone activity(GO:0016530)
0.4	3.3	GO:0022851	GABA-gated chloride ion channel activity(GO:0022851)
0.4	3.6	GO:0008301	DNA binding, bending(GO:0008301)
0.4	8.3	GO:0070001	aspartic-type peptidase activity(GO:0070001)
0.4	69.9	GO:0051015	actin filament binding(GO:0051015)
0.4	7.8	GO:0031492	nucleosomal DNA binding(GO:0031492)
0.4	3.1	GO:0046703	natural killer cell lectin-like receptor binding(GO:0046703)
0.4	1.2	GO:0036033	mediator complex binding(GO:0036033)
0.4	34.6	GO:0042826	histone deacetylase binding(GO:0042826)
0.4	20.4	GO:0030971	receptor tyrosine kinase binding(GO:0030971)
0.4	5.6	GO:0043274	phospholipase binding(GO:0043274)
0.3	27.7	GO:0004843	thiol-dependent ubiquitin-specific protease activity(GO:0004843)
0.3	39.5	GO:0004725	protein tyrosine phosphatase activity(GO:0004725)
0.3	22.1	GO:0043566	structure-specific DNA binding(GO:0043566)
0.3	2.6	GO:0015232	heme transporter activity(GO:0015232)
0.3	13.9	GO:0004177	aminopeptidase activity(GO:0004177)
0.3	8.8	GO:0001205	transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205)
0.3	8.3	GO:0098632	protein binding involved in cell-cell adhesion(GO:0098632)
0.3	17.4	GO:0003725	double-stranded RNA binding(GO:0003725)
0.2	2.0	GO:0022833	mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.2	3.3	GO:0008327	methyl-CpG binding(GO:0008327)
0.2	5.8	GO:0004709	MAP kinase kinase kinase activity(GO:0004709)
0.2	7.2	GO:0008094	DNA-dependent ATPase activity(GO:0008094)
0.2	1.5	GO:0030296	protein tyrosine kinase activator activity(GO:0030296)
0.2	9.6	GO:0001046	core promoter sequence-specific DNA binding(GO:0001046)
0.2	7.7	GO:0001047	core promoter binding(GO:0001047)
0.2	32.9	GO:0001227	transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.2	3.6	GO:0042162	telomeric DNA binding(GO:0042162)
0.2	1.4	GO:0019958	C-X-C chemokine binding(GO:0019958)
0.2	31.1	GO:0005179	hormone activity(GO:0005179)
0.2	11.3	GO:0002039	p53 binding(GO:0002039)
0.2	2.5	GO:0070034	telomerase RNA binding(GO:0070034)
0.2	0.9	GO:0090555	phosphatidylethanolamine-translocating ATPase activity(GO:0090555)
0.2	2.6	GO:0005092	GDP-dissociation inhibitor activity(GO:0005092)
0.2	1.9	GO:0005346	adenine nucleotide transmembrane transporter activity(GO:0000295) purine ribonucleotide transmembrane transporter activity(GO:0005346)
0.2	1.8	GO:0005000	vasopressin receptor activity(GO:0005000)
0.2	3.3	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.2	0.3	GO:0070698	type I activin receptor binding(GO:0070698)
0.1	4.1	GO:0001105	RNA polymerase II transcription coactivator activity(GO:0001105)
0.1	1.5	GO:0045499	chemorepellent activity(GO:0045499)
0.1	4.5	GO:0017075	syntaxin-1 binding(GO:0017075)
0.1	13.8	GO:0003714	transcription corepressor activity(GO:0003714)
0.1	0.5	GO:0016888	endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888)
0.1	1.2	GO:0070063	RNA polymerase binding(GO:0070063)
0.1	5.5	GO:0005044	scavenger receptor activity(GO:0005044)
0.1	4.9	GO:0004402	histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.1	2.2	GO:0043027	cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027)
0.1	1.4	GO:0008649	rRNA methyltransferase activity(GO:0008649)
0.1	2.1	GO:0002162	dystroglycan binding(GO:0002162)
0.1	2.2	GO:0001158	enhancer sequence-specific DNA binding(GO:0001158)
0.1	3.3	GO:0003755	peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.1	1.2	GO:0034483	heparan sulfate sulfotransferase activity(GO:0034483)
0.1	1.6	GO:0070530	K63-linked polyubiquitin binding(GO:0070530)
0.1	13.8	GO:0001077	transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077)
0.1	25.4	GO:0004842	ubiquitin-protein transferase activity(GO:0004842)
0.1	7.1	GO:0042393	histone binding(GO:0042393)
0.1	6.9	GO:0044822	mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.1	0.9	GO:0016881	acid-amino acid ligase activity(GO:0016881)
0.0	8.6	GO:0004866	endopeptidase inhibitor activity(GO:0004866)
0.0	2.9	GO:0001228	transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0	1.5	GO:0099589	G-protein coupled serotonin receptor activity(GO:0004993) serotonin receptor activity(GO:0099589)
0.0	1.3	GO:0043022	ribosome binding(GO:0043022)
0.0	0.5	GO:0004550	nucleoside diphosphate kinase activity(GO:0004550)
0.0	2.0	GO:0001948	glycoprotein binding(GO:0001948)
0.0	1.8	GO:0004896	cytokine receptor activity(GO:0004896)
0.0	1.2	GO:0030674	protein binding, bridging(GO:0030674)
0.0	0.1	GO:0043208	glycosphingolipid binding(GO:0043208)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
3.8	69.0	SA MMP CYTOKINE CONNECTION	Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.
3.5	56.3	PID TCR RAS PATHWAY	Ras signaling in the CD4+ TCR pathway
2.2	127.1	PID CD8 TCR PATHWAY	TCR signaling in naïve CD8+ T cells
1.6	64.7	SIG PIP3 SIGNALING IN B LYMPHOCYTES	Genes related to PIP3 signaling in B lymphocytes
1.4	29.8	ST WNT CA2 CYCLIC GMP PATHWAY	Wnt/Ca2+/cyclic GMP signaling.
1.3	24.1	PID DNA PK PATHWAY	DNA-PK pathway in nonhomologous end joining
0.9	48.7	PID ILK PATHWAY	Integrin-linked kinase signaling
0.8	2.5	PID TCR JNK PATHWAY	JNK signaling in the CD4+ TCR pathway
0.8	14.2	PID IL27 PATHWAY	IL27-mediated signaling events
0.8	26.6	PID BARD1 PATHWAY	BARD1 signaling events
0.7	23.5	PID IFNG PATHWAY	IFN-gamma pathway
0.7	19.6	SIG CD40PATHWAYMAP	Genes related to CD40 signaling
0.7	24.1	PID BCR 5PATHWAY	BCR signaling pathway
0.7	38.4	PID P53 REGULATION PATHWAY	p53 pathway
0.7	12.5	PID NECTIN PATHWAY	Nectin adhesion pathway
0.6	22.2	SIG CHEMOTAXIS	Genes related to chemotaxis
0.5	7.9	ST WNT BETA CATENIN PATHWAY	Wnt/beta-catenin Pathway
0.4	8.6	PID HDAC CLASSIII PATHWAY	Signaling events mediated by HDAC Class III
0.4	31.2	PID MYC ACTIV PATHWAY	Validated targets of C-MYC transcriptional activation
0.3	13.6	PID RXR VDR PATHWAY	RXR and RAR heterodimerization with other nuclear receptor
0.3	11.6	PID TNF PATHWAY	TNF receptor signaling pathway
0.3	4.9	ST TUMOR NECROSIS FACTOR PATHWAY	Tumor Necrosis Factor Pathway.
0.3	15.7	PID IL4 2PATHWAY	IL4-mediated signaling events
0.3	11.2	PID AR TF PATHWAY	Regulation of Androgen receptor activity
0.2	8.5	PID INTEGRIN A4B1 PATHWAY	Alpha4 beta1 integrin signaling events
0.2	5.5	PID TCR CALCIUM PATHWAY	Calcium signaling in the CD4+ TCR pathway
0.2	5.1	PID ANGIOPOIETIN RECEPTOR PATHWAY	Angiopoietin receptor Tie2-mediated signaling
0.2	14.0	PID P73PATHWAY	p73 transcription factor network
0.2	18.6	WNT SIGNALING	Genes related to Wnt-mediated signal transduction
0.2	4.1	PID CDC42 REG PATHWAY	Regulation of CDC42 activity
0.2	7.8	PID REG GR PATHWAY	Glucocorticoid receptor regulatory network
0.2	9.5	PID AR PATHWAY	Coregulation of Androgen receptor activity
0.2	2.2	SA CASPASE CASCADE	Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.2	7.2	PID PLK1 PATHWAY	PLK1 signaling events
0.1	2.2	PID IL6 7 PATHWAY	IL6-mediated signaling events
0.1	3.3	PID AJDISS 2PATHWAY	Posttranslational regulation of adherens junction stability and dissassembly
0.1	3.6	PID TELOMERASE PATHWAY	Regulation of Telomerase
0.1	3.1	PID P38 ALPHA BETA DOWNSTREAM PATHWAY	Signaling mediated by p38-alpha and p38-beta
0.1	1.7	PID FAK PATHWAY	Signaling events mediated by focal adhesion kinase
0.1	26.1	NABA SECRETED FACTORS	Genes encoding secreted soluble factors
0.1	2.8	PID DELTA NP63 PATHWAY	Validated transcriptional targets of deltaNp63 isoforms
0.1	2.2	PID HIF2PATHWAY	HIF-2-alpha transcription factor network
0.1	2.7	PID E2F PATHWAY	E2F transcription factor network
0.1	1.2	PID ATM PATHWAY	ATM pathway
0.0	0.3	PID AR NONGENOMIC PATHWAY	Nongenotropic Androgen signaling
0.0	1.4	PID P53 DOWNSTREAM PATHWAY	Direct p53 effectors

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
3.8	42.3	REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS	Genes involved in Phosphorylation of CD3 and TCR zeta chains
3.4	60.4	REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC	Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
3.0	38.4	REACTOME IL 6 SIGNALING	Genes involved in Interleukin-6 signaling
3.0	56.1	REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION	Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
2.8	19.6	REACTOME REGULATION OF THE FANCONI ANEMIA PATHWAY	Genes involved in Regulation of the Fanconi anemia pathway
1.6	158.0	REACTOME PEPTIDE CHAIN ELONGATION	Genes involved in Peptide chain elongation
1.6	17.3	REACTOME UNWINDING OF DNA	Genes involved in Unwinding of DNA
1.6	21.7	REACTOME ROLE OF DCC IN REGULATING APOPTOSIS	Genes involved in Role of DCC in regulating apoptosis
1.4	23.4	REACTOME RAP1 SIGNALLING	Genes involved in Rap1 signalling
1.4	36.9	REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX	Genes involved in Activation of the pre-replicative complex
1.2	24.4	REACTOME EXTENSION OF TELOMERES	Genes involved in Extension of Telomeres
1.2	37.1	REACTOME GPVI MEDIATED ACTIVATION CASCADE	Genes involved in GPVI-mediated activation cascade
1.2	15.3	REACTOME TRAFFICKING AND PROCESSING OF ENDOSOMAL TLR	Genes involved in Trafficking and processing of endosomal TLR
1.1	9.9	REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR	Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor
1.1	20.5	REACTOME SIGNALING BY FGFR1 FUSION MUTANTS	Genes involved in Signaling by FGFR1 fusion mutants
1.1	27.6	REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS	Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers
1.0	22.9	REACTOME DOWNSTREAM TCR SIGNALING	Genes involved in Downstream TCR signaling
0.9	47.7	REACTOME INTERFERON GAMMA SIGNALING	Genes involved in Interferon gamma signaling
0.8	9.7	REACTOME ANDROGEN BIOSYNTHESIS	Genes involved in Androgen biosynthesis
0.8	16.6	REACTOME SIGNALING BY HIPPO	Genes involved in Signaling by Hippo
0.8	3.1	REACTOME IRAK2 MEDIATED ACTIVATION OF TAK1 COMPLEX UPON TLR7 8 OR 9 STIMULATION	Genes involved in IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation
0.7	9.6	REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS	Genes involved in Bile salt and organic anion SLC transporters
0.6	34.3	REACTOME METABOLISM OF NON CODING RNA	Genes involved in Metabolism of non-coding RNA
0.6	8.6	REACTOME REGULATION OF COMPLEMENT CASCADE	Genes involved in Regulation of Complement cascade
0.5	14.5	REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC	Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.5	5.1	REACTOME TIE2 SIGNALING	Genes involved in Tie2 Signaling
0.4	12.5	REACTOME TIGHT JUNCTION INTERACTIONS	Genes involved in Tight junction interactions
0.4	3.6	REACTOME TELOMERE MAINTENANCE	Genes involved in Telomere Maintenance
0.4	11.0	REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION	Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.4	9.5	REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY	Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity
0.4	5.8	REACTOME CD28 DEPENDENT PI3K AKT SIGNALING	Genes involved in CD28 dependent PI3K/Akt signaling
0.4	4.4	REACTOME TRAF3 DEPENDENT IRF ACTIVATION PATHWAY	Genes involved in TRAF3-dependent IRF activation pathway
0.4	28.0	REACTOME LATE PHASE OF HIV LIFE CYCLE	Genes involved in Late Phase of HIV Life Cycle
0.4	3.8	REACTOME INTEGRATION OF PROVIRUS	Genes involved in Integration of provirus
0.4	17.5	REACTOME MEIOTIC RECOMBINATION	Genes involved in Meiotic Recombination
0.3	15.7	REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES	Genes involved in Chemokine receptors bind chemokines
0.3	13.5	REACTOME NRAGE SIGNALS DEATH THROUGH JNK	Genes involved in NRAGE signals death through JNK
0.2	13.7	REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION	Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.2	3.1	REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT	Genes involved in Endosomal Sorting Complex Required For Transport (ESCRT)
0.2	13.6	REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY	Genes involved in Nuclear Receptor transcription pathway
0.2	3.3	REACTOME GABA A RECEPTOR ACTIVATION	Genes involved in GABA A receptor activation
0.2	2.7	REACTOME G1 S SPECIFIC TRANSCRIPTION	Genes involved in G1/S-Specific Transcription
0.2	3.8	REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING	Genes involved in Negative regulators of RIG-I/MDA5 signaling
0.2	2.0	REACTOME LIGAND GATED ION CHANNEL TRANSPORT	Genes involved in Ligand-gated ion channel transport
0.2	2.2	REACTOME SIGNALING BY FGFR1 MUTANTS	Genes involved in Signaling by FGFR1 mutants
0.2	3.0	REACTOME METABOLISM OF POLYAMINES	Genes involved in Metabolism of polyamines
0.2	9.0	REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES	Genes involved in Loss of Nlp from mitotic centrosomes
0.1	2.2	REACTOME HYALURONAN METABOLISM	Genes involved in Hyaluronan metabolism
0.1	11.5	REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2	Genes involved in Response to elevated platelet cytosolic Ca2+
0.1	12.1	REACTOME SIGNALING BY RHO GTPASES	Genes involved in Signaling by Rho GTPases
0.1	2.1	REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE	Genes involved in Sema4D induced cell migration and growth-cone collapse
0.1	2.2	REACTOME INTRINSIC PATHWAY FOR APOPTOSIS	Genes involved in Intrinsic Pathway for Apoptosis
0.1	1.9	REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE	Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere
0.1	5.5	REACTOME MITOTIC PROMETAPHASE	Genes involved in Mitotic Prometaphase
0.1	6.3	REACTOME MRNA SPLICING	Genes involved in mRNA Splicing
0.1	1.9	REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES	Genes involved in Transport of vitamins, nucleosides, and related molecules
0.1	2.0	REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS	Genes involved in Sphingolipid de novo biosynthesis
0.0	0.9	REACTOME SULFUR AMINO ACID METABOLISM	Genes involved in Sulfur amino acid metabolism
0.0	0.3	REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE	Genes involved in Regulation of Insulin Secretion by Acetylcholine
0.0	1.5	REACTOME METABOLISM OF VITAMINS AND COFACTORS	Genes involved in Metabolism of vitamins and cofactors
0.0	0.3	REACTOME SIGNALING BY NODAL	Genes involved in Signaling by NODAL
0.0	1.9	REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS	Genes involved in Glycerophospholipid biosynthesis