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GSE53960: rat RNA-Seq transcriptomic Bodymap

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Results for Ehf

Z-value: 0.50

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Transcription factors associated with Ehf

Gene Symbol Gene ID Gene Info
ENSRNOG00000007484 ets homologous factor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Ehfrn6_v1_chr3_-_93216495_93216495-0.062.6e-01Click!

Activity profile of Ehf motif

Sorted Z-values of Ehf motif

Promoter Log-likelihood Transcript Gene Gene Info
chr4_+_21462779 32.76 ENSRNOT00000089747
glutamate metabotropic receptor 3
chr1_-_70235091 22.29 ENSRNOT00000075745
antisense paternally expressed gene 3
chr14_+_83752393 17.86 ENSRNOT00000081123
selenoprotein M
chr19_+_387374 15.99 ENSRNOT00000075433
uncharacterized LOC102547811
chr4_-_16654811 15.92 ENSRNOT00000008637
piccolo (presynaptic cytomatrix protein)
chr19_+_209926 15.18 ENSRNOT00000071393
uncharacterized LOC108348293
chr19_-_36157924 14.40 ENSRNOT00000072022

chr1_-_24858316 14.39 ENSRNOT00000077927

chr2_+_54191538 14.27 ENSRNOT00000019524
phosphatidylinositol-specific phospholipase C, X domain containing 3
chr19_-_29134876 11.63 ENSRNOT00000040545

chr19_-_37427989 11.17 ENSRNOT00000022863
tubulin polymerization-promoting protein family member 3
chr8_+_117062884 7.00 ENSRNOT00000082452
ENSRNOT00000071540
nicolin 1
chr4_-_171591882 5.34 ENSRNOT00000009328
epidermal growth factor receptor pathway substrate 8
chr17_+_21521505 5.30 ENSRNOT00000020672
male germ cell-associated kinase
chr19_+_551708 4.64 ENSRNOT00000015811
family with sequence similarity 96, member B
chr11_+_61661310 4.46 ENSRNOT00000093325
zinc finger, DHHC-type containing 23
chr9_-_50884596 3.49 ENSRNOT00000016285
KDEL motif containing 1
chr2_+_196013799 2.92 ENSRNOT00000084023
pogo transposable element with ZNF domain
chr1_-_149633029 2.83 ENSRNOT00000048861
olfactory receptor 14A2-like
chr8_-_116297850 2.51 ENSRNOT00000031739
ENSRNOT00000082320
cytochrome b561 family, member D2
chr10_+_59259955 2.12 ENSRNOT00000021816
ankyrin repeat and FYVE domain containing 1
chr18_+_37597156 1.92 ENSRNOT00000031370
serine/threonine kinase 32A
chr10_+_55997614 1.77 ENSRNOT00000013071
N(alpha)-acetyltransferase 38, NatC auxiliary subunit
chr3_+_73010786 1.59 ENSRNOT00000051010
olfactory receptor 447
chr4_+_170820594 1.07 ENSRNOT00000032568
similar to C030030A07Rik protein
chr17_+_8558827 1.06 ENSRNOT00000016187
interleukin 9
chr8_+_107106982 1.02 ENSRNOT00000072574
hypothetical protein LOC684395
chr10_+_44407475 0.92 ENSRNOT00000071556
olfactory receptor 1437
chr3_-_103224624 0.77 ENSRNOT00000049984
olfactory receptor 785
chrX_+_123023280 0.71 ENSRNOT00000087749
predicted gene 6268
chrX_-_124576133 0.70 ENSRNOT00000041904
reproductive homeobox on X chromosome 3
chr6_+_69971227 0.68 ENSRNOT00000075349
forkhead box G1
chr4_-_167089055 0.49 ENSRNOT00000050409
taste receptor, type 2, member 113
chr4_+_27509221 0.32 ENSRNOT00000067954
ankyrin repeat and IBR domain containing 1
chr4_-_167155058 0.09 ENSRNOT00000047402
taste receptor, type 2, member 123

Network of associatons between targets according to the STRING database.

First level regulatory network of Ehf

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.0 32.8 GO:0007196 adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway(GO:0007196)
2.7 15.9 GO:0099526 synaptic vesicle targeting(GO:0016080) presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526)
2.2 17.9 GO:0035934 corticosterone secretion(GO:0035934)
1.8 5.3 GO:0070358 actin polymerization-dependent cell motility(GO:0070358)
1.3 5.3 GO:1902856 negative regulation of nonmotile primary cilium assembly(GO:1902856)
0.4 2.1 GO:0048549 positive regulation of pinocytosis(GO:0048549)
0.2 2.9 GO:0051382 kinetochore assembly(GO:0051382)
0.2 4.6 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.1 4.5 GO:0018345 protein palmitoylation(GO:0018345)
0.1 11.2 GO:0046785 microtubule polymerization(GO:0046785)
0.1 0.7 GO:0016199 axon midline choice point recognition(GO:0016199)
0.1 1.1 GO:0032754 positive regulation of interleukin-5 production(GO:0032754)
0.0 3.5 GO:0006664 glycolipid metabolic process(GO:0006664)
0.0 14.3 GO:0006629 lipid metabolic process(GO:0006629)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
5.3 15.9 GO:0044317 rod spherule(GO:0044317)
1.6 32.8 GO:0097449 astrocyte projection(GO:0097449)
0.9 4.6 GO:0097361 CIA complex(GO:0097361)
0.4 1.8 GO:0031417 NatC complex(GO:0031417)
0.3 5.3 GO:0017146 NMDA selective glutamate receptor complex(GO:0017146)
0.2 3.1 GO:0097542 ciliary tip(GO:0097542)
0.2 2.1 GO:0044352 pinosome(GO:0044352) macropinosome(GO:0044354)
0.0 3.5 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 11.2 GO:0005874 microtubule(GO:0005874)
0.0 17.9 GO:0005794 Golgi apparatus(GO:0005794)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
10.9 32.8 GO:0001641 group II metabotropic glutamate receptor activity(GO:0001641)
0.9 15.9 GO:0005522 profilin binding(GO:0005522)
0.2 3.5 GO:0046527 glucosyltransferase activity(GO:0046527)
0.1 14.3 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)
0.1 4.5 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 5.3 GO:0048365 signaling adaptor activity(GO:0035591) Rac GTPase binding(GO:0048365)
0.0 11.2 GO:0015631 tubulin binding(GO:0015631)
0.0 5.3 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 2.1 GO:0017137 Rab GTPase binding(GO:0017137)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 5.3 PID RAC1 REG PATHWAY Regulation of RAC1 activity
0.1 5.3 PID AR PATHWAY Coregulation of Androgen receptor activity

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 32.8 REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors)