GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Lhx4 Links NCBI RGD Ensembl	ENSRNOG00000003595	LIM homeobox 4

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Lhx4	rn6_v1_chr13_-_73390393_73390543	-0.34	2.4e-10	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr4_+_29535852 Show fit	21.07	ENSRNOT00000087619	NEWGENE_621351 Links NCBI RGD Ensembl Show fit	collagen, type I, alpha 2
chr10_+_54352270 Show fit	18.08	ENSRNOT00000036752	Dhrs7c Links NCBI RGD Ensembl Show fit	dehydrogenase/reductase 7C
chr16_+_29674793 Show fit	16.95	ENSRNOT00000059724	Anxa10 Links NCBI RGD Ensembl Show fit	annexin A10
chr17_+_25082056 Show fit	16.51	ENSRNOT00000037041	AABR07027339.1 Links NCBI RGD Ensembl Show fit
chr6_-_95934296 Show fit	14.93	ENSRNOT00000034338	Six1 Links NCBI RGD Ensembl Show fit	SIX homeobox 1
chr3_-_37803112 Show fit	13.09	ENSRNOT00000059461	Neb Links NCBI RGD Ensembl Show fit	nebulin
chrX_-_40086870 Show fit	12.61	ENSRNOT00000010027	Smpx Links NCBI RGD Ensembl Show fit	small muscle protein, X-linked
chr6_-_60124274 Show fit	11.03	ENSRNOT00000059823	Lsmem1 Links NCBI RGD Ensembl Show fit	leucine-rich single-pass membrane protein 1
chr4_-_120559078 Show fit	10.40	ENSRNOT00000085730 ENSRNOT00000079575	Kbtbd12 Links NCBI RGD Ensembl Show fit	kelch repeat and BTB domain containing 12
chr2_-_227411964 Show fit	9.77	ENSRNOT00000019931	Synpo2 Links NCBI RGD Ensembl Show fit	synaptopodin 2
chr6_-_23291568 Show fit	9.51	ENSRNOT00000085708	Clip4 Links NCBI RGD Ensembl Show fit	CAP-GLY domain containing linker protein family, member 4
chr20_-_4542073 Show fit	9.27	ENSRNOT00000000477	Cfb Links NCBI RGD Ensembl Show fit	complement factor B
chrX_+_156463953 Show fit	8.85	ENSRNOT00000079889	Flna Links NCBI RGD Ensembl Show fit	filamin A
chr14_-_77810147 Show fit	8.68	ENSRNOT00000035427	Cytl1 Links NCBI RGD Ensembl Show fit	cytokine like 1
chr1_+_101603222 Show fit	8.49	ENSRNOT00000033278	Izumo1 Links NCBI RGD Ensembl Show fit	izumo sperm-egg fusion 1
chr10_-_51778939 Show fit	8.43	ENSRNOT00000078675 ENSRNOT00000057562	Myocd Links NCBI RGD Ensembl Show fit	myocardin
chr16_-_29936307 Show fit	8.35	ENSRNOT00000088707	Ddx60 Links NCBI RGD Ensembl Show fit	DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
chr5_-_115387377 Show fit	8.33	ENSRNOT00000036030 ENSRNOT00000077492	RGD1560146 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein MGC34837
chrX_+_109996163 Show fit	7.91	ENSRNOT00000093349	Nrk Links NCBI RGD Ensembl Show fit	Nik related kinase
chr11_+_15081774 Show fit	7.78	ENSRNOT00000009911	LOC108348050 Links NCBI RGD Ensembl Show fit	ubiquitin carboxyl-terminal hydrolase 25-like
chr3_-_7498555 Show fit	7.30	ENSRNOT00000017725	Barhl1 Links NCBI RGD Ensembl Show fit	BarH-like homeobox 1
chr17_-_15467320 Show fit	7.12	ENSRNOT00000072490 ENSRNOT00000093561	Ogn Links NCBI RGD Ensembl Show fit	osteoglycin
chr6_-_128149220 Show fit	6.82	ENSRNOT00000014204	Gsc Links NCBI RGD Ensembl Show fit	goosecoid homeobox
chr16_+_2634603 Show fit	6.63	ENSRNOT00000019113	Hesx1 Links NCBI RGD Ensembl Show fit	HESX homeobox 1
chr2_+_54466280 Show fit	6.35	ENSRNOT00000033112	C6 Links NCBI RGD Ensembl Show fit	complement C6
chr14_+_37116492 Show fit	6.20	ENSRNOT00000002921	Sgcb Links NCBI RGD Ensembl Show fit	sarcoglycan, beta
chr4_+_57925323 Show fit	6.09	ENSRNOT00000085798	Cpa5 Links NCBI RGD Ensembl Show fit	carboxypeptidase A5
chr7_-_69982592 Show fit	5.97	ENSRNOT00000040010	RGD1564306 Links NCBI RGD Ensembl Show fit	similar to developmental pluripotency associated 5
chr15_-_29548400 Show fit	5.93	ENSRNOT00000078176	AABR07017639.2 Links NCBI RGD Ensembl Show fit
chr7_-_145062956 Show fit	5.82	ENSRNOT00000055274	RGD1563200 Links NCBI RGD Ensembl Show fit	similar to CDNA sequence BC048502
chr7_-_73130740 Show fit	5.73	ENSRNOT00000075584	9430069I07Rik Links NCBI RGD Ensembl Show fit	RIKEN cDNA 9430069I07 gene
chr18_+_55666027 Show fit	5.54	ENSRNOT00000045950	RGD1305184 Links NCBI RGD Ensembl Show fit	similar to CDNA sequence BC023105
chr5_+_165724027 Show fit	5.33	ENSRNOT00000018000	Casz1 Links NCBI RGD Ensembl Show fit	castor zinc finger 1
chr17_-_69862110 Show fit	5.31	ENSRNOT00000058312	Akr1cl Links NCBI RGD Ensembl Show fit	aldo-keto reductase family 1, member C-like
chr3_-_127500709 Show fit	5.30	ENSRNOT00000006330	Hao1 Links NCBI RGD Ensembl Show fit	hydroxyacid oxidase 1
chr14_+_76732650 Show fit	5.29	ENSRNOT00000088197	Clnk Links NCBI RGD Ensembl Show fit	cytokine-dependent hematopoietic cell linker
chr1_+_279633671 Show fit	5.25	ENSRNOT00000036012 ENSRNOT00000091669	Ccdc172 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 172
chr10_+_64930023 Show fit	5.20	ENSRNOT00000071102	AABR07030053.1 Links NCBI RGD Ensembl Show fit
chr14_-_24123253 Show fit	5.11	ENSRNOT00000002743	Tmprss11b Links NCBI RGD Ensembl Show fit	transmembrane protease, serine 11B
chr2_+_193627243 Show fit	4.85	ENSRNOT00000082934	AABR07012331.1 Links NCBI RGD Ensembl Show fit
chr10_+_56524468 Show fit	4.81	ENSRNOT00000022041	Gps2 Links NCBI RGD Ensembl Show fit	G protein pathway suppressor 2
chr4_+_169147243 Show fit	4.77	ENSRNOT00000011580	Emp1 Links NCBI RGD Ensembl Show fit	epithelial membrane protein 1
chr1_-_104973648 Show fit	4.75	ENSRNOT00000019739	Dbx1 Links NCBI RGD Ensembl Show fit	developing brain homeobox 1
chr10_+_45659143 Show fit	4.67	ENSRNOT00000058327	Wnt9a Links NCBI RGD Ensembl Show fit	wingless-type MMTV integration site family, member 9A
chr16_-_24951612 Show fit	4.64	ENSRNOT00000018987	Tktl2 Links NCBI RGD Ensembl Show fit	transketolase-like 2
chr4_+_169161585 Show fit	4.62	ENSRNOT00000079785	Emp1 Links NCBI RGD Ensembl Show fit	epithelial membrane protein 1
chr1_+_255040426 Show fit	4.60	ENSRNOT00000092151	Pcgf5 Links NCBI RGD Ensembl Show fit	polycomb group ring finger 5
chr11_-_60547201 Show fit	4.52	ENSRNOT00000093151	Btla Links NCBI RGD Ensembl Show fit	B and T lymphocyte associated
chr15_+_110114148 Show fit	4.43	ENSRNOT00000006264	Itgbl1 Links NCBI RGD Ensembl Show fit	integrin subunit beta like 1
chr8_-_39551700 Show fit	4.38	ENSRNOT00000091894 ENSRNOT00000076025	Pknox2 Links NCBI RGD Ensembl Show fit	PBX/knotted 1 homeobox 2
chr7_-_96464049 Show fit	4.30	ENSRNOT00000006517	Has2 Links NCBI RGD Ensembl Show fit	hyaluronan synthase 2
chr10_+_94471476 Show fit	4.19	ENSRNOT00000088697	Tcam1 Links NCBI RGD Ensembl Show fit	testicular cell adhesion molecule 1
chr3_-_166993940 Show fit	4.18	ENSRNOT00000034669	Zfp217 Links NCBI RGD Ensembl Show fit	zinc finger protein 217
chr3_+_70327193 Show fit	4.15	ENSRNOT00000089165	Fsip2 Links NCBI RGD Ensembl Show fit	fibrous sheath-interacting protein 2
chr2_+_127549331 Show fit	4.11	ENSRNOT00000093416	Slc25a31 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 31
chr16_+_71889235 Show fit	4.08	ENSRNOT00000038266	Adam32 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 32
chr13_-_90074952 Show fit	3.94	ENSRNOT00000038006	Slamf7 Links NCBI RGD Ensembl Show fit	SLAM family member 7
chr1_-_88162583 Show fit	3.94	ENSRNOT00000087411	Catsperg Links NCBI RGD Ensembl Show fit	cation channel sperm associated auxiliary subunit gamma
chr4_-_148437961 Show fit	3.93	ENSRNOT00000082907	Alox5 Links NCBI RGD Ensembl Show fit	arachidonate 5-lipoxygenase
chr4_-_58250798 Show fit	3.92	ENSRNOT00000048436	Klf14 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 14
chr13_+_26903052 Show fit	3.91	ENSRNOT00000003625	Serpinb5 Links NCBI RGD Ensembl Show fit	serpin family B member 5
chr8_-_113689681 Show fit	3.87	ENSRNOT00000056435	LOC688828 Links NCBI RGD Ensembl Show fit	similar to Nucleoside diphosphate-linked moiety X motif 16 (Nudix motif 16)
chr1_+_128637049 Show fit	3.78	ENSRNOT00000018639	Ttc23 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 23
chr3_-_166994286 Show fit	3.73	ENSRNOT00000081593	Zfp217 Links NCBI RGD Ensembl Show fit	zinc finger protein 217
chr10_-_88000423 Show fit	3.73	ENSRNOT00000076787 ENSRNOT00000046751 ENSRNOT00000091394	Krt32 Links NCBI RGD Ensembl Show fit	keratin 32
chr19_-_29968424 Show fit	3.71	ENSRNOT00000024981	Inpp4b Links NCBI RGD Ensembl Show fit	inositol polyphosphate-4-phosphatase type II B
chr1_+_98414226 Show fit	3.68	ENSRNOT00000090785	Siglecl1 Links NCBI RGD Ensembl Show fit	SIGLEC family like 1
chr1_-_276228574 Show fit	3.65	ENSRNOT00000021746	Gucy2g Links NCBI RGD Ensembl Show fit	guanylate cyclase 2G
chr13_+_49005405 Show fit	3.63	ENSRNOT00000092560 ENSRNOT00000076457	Lemd1 Links NCBI RGD Ensembl Show fit	LEM domain containing 1
chr3_+_8430829 Show fit	3.62	ENSRNOT00000090440 ENSRNOT00000060969	Cercam Links NCBI RGD Ensembl Show fit	cerebral endothelial cell adhesion molecule
chrX_-_111191932 Show fit	3.45	ENSRNOT00000088050 ENSRNOT00000083613	Morc4 Links NCBI RGD Ensembl Show fit	MORC family CW-type zinc finger 4
chr4_-_10995792 Show fit	3.45	ENSRNOT00000078733	AABR07059243.1 Links NCBI RGD Ensembl Show fit
chr11_-_60546997 Show fit	3.38	ENSRNOT00000083124 ENSRNOT00000050092	Btla Links NCBI RGD Ensembl Show fit	B and T lymphocyte associated
chr3_+_38367556 Show fit	3.35	ENSRNOT00000049144	RGD1559995 Links NCBI RGD Ensembl Show fit	similar to developmental pluripotency associated 5
chr13_+_27449934 Show fit	3.34	ENSRNOT00000003409	Serpinb2 Links NCBI RGD Ensembl Show fit	serpin family B member 2
chr14_-_81053905 Show fit	3.20	ENSRNOT00000045068 ENSRNOT00000040215	Rgs12 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 12
chr1_+_128614138 Show fit	3.19	ENSRNOT00000076227 ENSRNOT00000078707	Ttc23 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 23
chr14_-_21758788 Show fit	3.16	ENSRNOT00000038520	2310003L06Rik Links NCBI RGD Ensembl Show fit	RIKEN cDNA 2310003L06 gene
chr13_-_91735361 Show fit	3.15	ENSRNOT00000058090	Fcer1a Links NCBI RGD Ensembl Show fit	Fc fragment of IgE receptor Ia
chr2_-_61692487 Show fit	3.14	ENSRNOT00000078544	LOC499541 Links NCBI RGD Ensembl Show fit	LRRGT00045
chr1_+_101599018 Show fit	3.13	ENSRNOT00000028494	Fut1 Links NCBI RGD Ensembl Show fit	fucosyltransferase 1
chr3_+_76890792 Show fit	3.12	ENSRNOT00000087552	Olr639 Links NCBI RGD Ensembl Show fit	olfactory receptor 639
chr1_-_78180216 Show fit	3.09	ENSRNOT00000071576	C5ar2 Links NCBI RGD Ensembl Show fit	complement component 5a receptor 2
chr8_-_104155775 Show fit	3.09	ENSRNOT00000042885	LOC102550734 Links NCBI RGD Ensembl Show fit	60S ribosomal protein L31-like
chr1_-_101095594 Show fit	2.94	ENSRNOT00000027944	Fcgrt Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor and transporter
chr18_-_43945273 Show fit	2.92	ENSRNOT00000088900	Dtwd2 Links NCBI RGD Ensembl Show fit	DTW domain containing 2
chr18_+_45023932 Show fit	2.91	ENSRNOT00000039379	Fam170a Links NCBI RGD Ensembl Show fit	family with sequence similarity 170, member A
chr14_-_44078897 Show fit	2.89	ENSRNOT00000031792	N4bp2 Links NCBI RGD Ensembl Show fit	NEDD4 binding protein 2
chr5_+_16845631 Show fit	2.80	ENSRNOT00000047889	Chchd7 Links NCBI RGD Ensembl Show fit	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4_+_79021872 Show fit	2.78	ENSRNOT00000012677 ENSRNOT00000067125	Fam221a Links NCBI RGD Ensembl Show fit	family with sequence similarity 221, member A
chr1_-_94404211 Show fit	2.77	ENSRNOT00000019463	Uri1 Links NCBI RGD Ensembl Show fit	URI1, prefoldin-like chaperone
chr6_-_86223052 Show fit	2.73	ENSRNOT00000046828	Fscb Links NCBI RGD Ensembl Show fit	fibrous sheath CABYR binding protein
chr11_+_61605937 Show fit	2.67	ENSRNOT00000093455 ENSRNOT00000093242	Gramd1c Links NCBI RGD Ensembl Show fit	GRAM domain containing 1C
chrX_+_23414354 Show fit	2.66	ENSRNOT00000031235	Cldn34a Links NCBI RGD Ensembl Show fit	claudin 34A
chr4_-_85314672 Show fit	2.64	ENSRNOT00000033672	Crhr2 Links NCBI RGD Ensembl Show fit	corticotropin releasing hormone receptor 2
chr1_-_14117021 Show fit	2.62	ENSRNOT00000004344	RGD1560303 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein 4933423E17
chr1_+_166893734 Show fit	2.60	ENSRNOT00000026702	Phox2a Links NCBI RGD Ensembl Show fit	paired-like homeobox 2a
chr1_-_173764246 Show fit	2.54	ENSRNOT00000019690 ENSRNOT00000086944	Lmo1 Links NCBI RGD Ensembl Show fit	LIM domain only 1
chrX_-_106607352 Show fit	2.54	ENSRNOT00000082858	AABR07040624.1 Links NCBI RGD Ensembl Show fit
chr5_+_119097715 Show fit	2.53	ENSRNOT00000045987	Ror1 Links NCBI RGD Ensembl Show fit	receptor tyrosine kinase-like orphan receptor 1
chr1_-_128287151 Show fit	2.52	ENSRNOT00000084946 ENSRNOT00000089723	Mef2a Links NCBI RGD Ensembl Show fit	myocyte enhancer factor 2a
chr6_-_140880070 Show fit	2.51	ENSRNOT00000073779	LOC691828 Links NCBI RGD Ensembl Show fit	uncharacterized LOC691828
chr8_-_43304560 Show fit	2.49	ENSRNOT00000060092	Olr1307 Links NCBI RGD Ensembl Show fit	olfactory receptor 1307
chr3_+_3389612 Show fit	2.48	ENSRNOT00000041984	Rpl8 Links NCBI RGD Ensembl Show fit	ribosomal protein L8
chr1_+_93242050 Show fit	2.46	ENSRNOT00000013741	RGD1562402 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L27a
chr4_+_9882904 Show fit	2.46	ENSRNOT00000016909	Dnajc2 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C2
chr20_+_3176107 Show fit	2.44	ENSRNOT00000001036	RT1-S3 Links NCBI RGD Ensembl Show fit	RT1 class Ib, locus S3
chr13_-_84795070 Show fit	2.44	ENSRNOT00000076083 ENSRNOT00000029706	Fmo9 Links NCBI RGD Ensembl Show fit	flavin containing monooxygenase 9
chr7_-_140291620 Show fit	2.40	ENSRNOT00000088323	Adcy6 Links NCBI RGD Ensembl Show fit	adenylate cyclase 6
chr17_+_63635086 Show fit	2.39	ENSRNOT00000020634	Dip2c Links NCBI RGD Ensembl Show fit	disco-interacting protein 2 homolog C
chr10_+_75365822 Show fit	2.38	ENSRNOT00000055705	Vezf1 Links NCBI RGD Ensembl Show fit	vascular endothelial zinc finger 1
chr20_-_13994794 Show fit	2.38	ENSRNOT00000093466	Ggt5 Links NCBI RGD Ensembl Show fit	gamma-glutamyltransferase 5
chr13_-_83425641 Show fit	2.33	ENSRNOT00000063870	Tbx19 Links NCBI RGD Ensembl Show fit	T-box 19
chr8_+_5790034 Show fit	2.32	ENSRNOT00000061887	Mmp27 Links NCBI RGD Ensembl Show fit	matrix metallopeptidase 27
chr2_-_185005572 Show fit	2.29	ENSRNOT00000093291	Fam160a1 Links NCBI RGD Ensembl Show fit	family with sequence similarity 160, member A1
chr5_+_48313599 Show fit	2.28	ENSRNOT00000081825	Gabrr2 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor rho 2 subunit
chr3_-_16441030 Show fit	2.27	ENSRNOT00000047784	AABR07051532.1 Links NCBI RGD Ensembl Show fit
chr20_-_7943575 Show fit	2.27	ENSRNOT00000066897	Tulp1 Links NCBI RGD Ensembl Show fit	tubby like protein 1
chr4_-_180234804 Show fit	2.26	ENSRNOT00000070957	Bhlhe41 Links NCBI RGD Ensembl Show fit	basic helix-loop-helix family, member e41
chr6_-_143195445 Show fit	2.26	ENSRNOT00000078672	AABR07065837.1 Links NCBI RGD Ensembl Show fit
chr8_-_39460844 Show fit	2.21	ENSRNOT00000048875	Pknox2 Links NCBI RGD Ensembl Show fit	PBX/knotted 1 homeobox 2
chr11_-_82366505 Show fit	2.19	ENSRNOT00000041326	RGD1559972 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L27a
chr8_+_104106740 Show fit	2.16	ENSRNOT00000015015	Tfdp2 Links NCBI RGD Ensembl Show fit	transcription factor Dp-2
chr3_-_154627257 Show fit	2.14	ENSRNOT00000018328	Tgm2 Links NCBI RGD Ensembl Show fit	transglutaminase 2
chr1_-_56683731 Show fit	2.12	ENSRNOT00000014552	Thbs2 Links NCBI RGD Ensembl Show fit	thrombospondin 2
chr10_+_61685645 Show fit	2.11	ENSRNOT00000003933	Mnt Links NCBI RGD Ensembl Show fit	MAX network transcriptional repressor
chr9_+_8054466 Show fit	2.11	ENSRNOT00000081513	Adgre4 Links NCBI RGD Ensembl Show fit	adhesion G protein-coupled receptor E4
chr3_-_90751055 Show fit	2.11	ENSRNOT00000040741	LOC499843 Links NCBI RGD Ensembl Show fit	LRRGT00091
chr20_+_4357733 Show fit	2.11	ENSRNOT00000000509	Pbx2 Links NCBI RGD Ensembl Show fit	PBX homeobox 2
chr20_-_5166448 Show fit	2.08	ENSRNOT00000076331	Aif1 Links NCBI RGD Ensembl Show fit	allograft inflammatory factor 1
chr5_+_29622281 Show fit	2.08	ENSRNOT00000012377	Nbn Links NCBI RGD Ensembl Show fit	nibrin
chr9_+_94324793 Show fit	2.08	ENSRNOT00000092493	Eif4e2 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4E family member 2
chr4_-_172063391 Show fit	2.07	ENSRNOT00000010158	Slc15a5 Links NCBI RGD Ensembl Show fit	solute carrier family 15, member 5
chr18_+_35384743 Show fit	2.07	ENSRNOT00000076143 ENSRNOT00000074593	LOC100911797 Links NCBI RGD Ensembl Show fit	serine protease inhibitor Kazal-type 5-like
chr8_-_78397123 Show fit	2.06	ENSRNOT00000087270 ENSRNOT00000084925	Tcf12 Links NCBI RGD Ensembl Show fit	transcription factor 12
chr2_+_127525285 Show fit	2.06	ENSRNOT00000093247	Intu Links NCBI RGD Ensembl Show fit	inturned planar cell polarity protein
chr18_-_36322320 Show fit	2.06	ENSRNOT00000060260	Grxcr2 Links NCBI RGD Ensembl Show fit	glutaredoxin and cysteine rich domain containing 2
chr2_-_248789508 Show fit	2.05	ENSRNOT00000090705	Pkn2 Links NCBI RGD Ensembl Show fit	protein kinase N2
chr10_-_13446135 Show fit	2.03	ENSRNOT00000084991	Kctd5 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 5
chr1_-_3849080 Show fit	2.00	ENSRNOT00000045301	RGD1560633 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L27a
chr5_-_162751128 Show fit	1.96	ENSRNOT00000068281	RGD1559644 Links NCBI RGD Ensembl Show fit	similar to novel protein similar to esterases
chrX_-_124252447 Show fit	1.96	ENSRNOT00000061546	Rhox12 Links NCBI RGD Ensembl Show fit	reproductive homeobox 12
chr15_+_27438853 Show fit	1.96	ENSRNOT00000011636	Olr1622 Links NCBI RGD Ensembl Show fit	olfactory receptor 1622
chr1_+_212281237 Show fit	1.95	ENSRNOT00000075049	Utf1 Links NCBI RGD Ensembl Show fit	undifferentiated embryonic cell transcription factor 1
chr1_+_127802978 Show fit	1.94	ENSRNOT00000055877	Adamts17 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase with thrombospondin type 1 motif, 17
chr1_+_79631668 Show fit	1.92	ENSRNOT00000083546 ENSRNOT00000035286	Mill1 Links NCBI RGD Ensembl Show fit	MHC I like leukocyte 1
chr11_+_88095170 Show fit	1.88	ENSRNOT00000041557	Ccdc116 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 116
chr3_-_79090636 Show fit	1.85	ENSRNOT00000084116	AABR07052846.1 Links NCBI RGD Ensembl Show fit
chr12_-_23727535 Show fit	1.85	ENSRNOT00000085911 ENSRNOT00000001950	Dtx2 Links NCBI RGD Ensembl Show fit	deltex E3 ubiquitin ligase 2
chr7_+_120923274 Show fit	1.84	ENSRNOT00000049247	Gtpbp1 Links NCBI RGD Ensembl Show fit	GTP binding protein 1
chr2_+_80269661 Show fit	1.82	ENSRNOT00000015975	AABR07008940.1 Links NCBI RGD Ensembl Show fit
chrX_+_144994139 Show fit	1.82	ENSRNOT00000071783	LOC102546596 Links NCBI RGD Ensembl Show fit	pre-mRNA-splicing factor CWC22 homolog
chr5_-_162442968 Show fit	1.81	ENSRNOT00000048366	Pramef17 Links NCBI RGD Ensembl Show fit	PRAME family member 17
chr16_-_49453394 Show fit	1.81	ENSRNOT00000041617	Lrp2bp Links NCBI RGD Ensembl Show fit	Lrp2 binding protein
chr9_-_24467892 Show fit	1.80	ENSRNOT00000060803	Defb18 Links NCBI RGD Ensembl Show fit	defensin beta 18
chr6_+_49825469 Show fit	1.78	ENSRNOT00000006921	Fam150b Links NCBI RGD Ensembl Show fit	family with sequence similarity 150, member B
chr10_-_87564327 Show fit	1.77	ENSRNOT00000064760 ENSRNOT00000068237	LOC680160 Links NCBI RGD Ensembl Show fit	similar to keratin associated protein 4-7
chr2_+_205160405 Show fit	1.77	ENSRNOT00000035605	Tspan2 Links NCBI RGD Ensembl Show fit	tetraspanin 2
chr18_+_65285318 Show fit	1.75	ENSRNOT00000020431	Tcf4 Links NCBI RGD Ensembl Show fit	transcription factor 4
chr10_-_87503591 Show fit	1.75	ENSRNOT00000037980	Krtap1-1 Links NCBI RGD Ensembl Show fit	keratin associated protein 1-1
chr12_+_48677905 Show fit	1.74	ENSRNOT00000083196	1700069L16Rik Links NCBI RGD Ensembl Show fit	RIKEN cDNA 1700069L16 gene
chr3_+_77337698 Show fit	1.72	ENSRNOT00000041690	LOC103690075 Links NCBI RGD Ensembl Show fit	olfactory receptor 4P4-like
chr9_-_42839837 Show fit	1.69	ENSRNOT00000038610	Neurl3 Links NCBI RGD Ensembl Show fit	neuralized E3 ubiquitin protein ligase 3
chr11_-_62396909 Show fit	1.68	ENSRNOT00000093596 ENSRNOT00000093179	Zbtb20 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 20
chr1_-_101819478 Show fit	1.66	ENSRNOT00000056181	Grwd1 Links NCBI RGD Ensembl Show fit	glutamate-rich WD repeat containing 1
chr11_-_32550539 Show fit	1.64	ENSRNOT00000002715	Rcan1 Links NCBI RGD Ensembl Show fit	regulator of calcineurin 1
chr4_-_56786754 Show fit	1.59	ENSRNOT00000050795	Kcp Links NCBI RGD Ensembl Show fit	kielin/chordin-like protein
chr11_+_47061354 Show fit	1.59	ENSRNOT00000039997	Pcnp Links NCBI RGD Ensembl Show fit	PEST proteolytic signal containing nuclear protein
chr1_+_185863043 Show fit	1.56	ENSRNOT00000079072	Sox6 Links NCBI RGD Ensembl Show fit	SRY box 6
chr1_-_90520344 Show fit	1.56	ENSRNOT00000078598	Kctd15 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 15
chr3_+_100769839 Show fit	1.56	ENSRNOT00000077703	Bdnf Links NCBI RGD Ensembl Show fit	brain-derived neurotrophic factor
chr9_-_121972055 Show fit	1.56	ENSRNOT00000089735	AABR07068851.1 Links NCBI RGD Ensembl Show fit	clusterin-like protein 1
chr2_-_157759819 Show fit	1.53	ENSRNOT00000015763 ENSRNOT00000016016	LOC100909712 Links NCBI RGD Ensembl Show fit	cyclin-L1-like
chrX_+_131381134 Show fit	1.51	ENSRNOT00000007474	AABR07041481.1 Links NCBI RGD Ensembl Show fit
chr7_-_107203897 Show fit	1.50	ENSRNOT00000086263	Lrrc6 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 6
chr3_+_31802999 Show fit	1.49	ENSRNOT00000041305	AABR07051996.1 Links NCBI RGD Ensembl Show fit
chr5_+_50381244 Show fit	1.47	ENSRNOT00000012385	Cga Links NCBI RGD Ensembl Show fit	glycoprotein hormones, alpha polypeptide
chr2_-_181900856 Show fit	1.46	ENSRNOT00000082156	Lrat Links NCBI RGD Ensembl Show fit	lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
chr1_+_74251167 Show fit	1.44	ENSRNOT00000040441	Vom2r29 Links NCBI RGD Ensembl Show fit	vomeronasal 2 receptor, 29
chr16_+_84465656 Show fit	1.44	ENSRNOT00000043188	LOC689713 Links NCBI RGD Ensembl Show fit	LRRGT00175
chr2_-_198706428 Show fit	1.43	ENSRNOT00000085006	Polr3gl Links NCBI RGD Ensembl Show fit	RNA polymerase III subunit G like
chr4_+_103495993 Show fit	1.42	ENSRNOT00000072325	AABR07061068.1 Links NCBI RGD Ensembl Show fit
chr20_+_42966140 Show fit	1.41	ENSRNOT00000000707	Marcks Links NCBI RGD Ensembl Show fit	myristoylated alanine rich protein kinase C substrate
chr4_+_28972434 Show fit	1.39	ENSRNOT00000014219	Gngt1 Links NCBI RGD Ensembl Show fit	G protein subunit gamma transducin 1
chr3_+_77289805 Show fit	1.38	ENSRNOT00000040581	LOC100910858 Links NCBI RGD Ensembl Show fit	olfactory receptor 4P4-like
chr1_+_72380711 Show fit	1.37	ENSRNOT00000022236	Fiz1 Links NCBI RGD Ensembl Show fit	FLT3-interacting zinc finger 1
chr3_+_17889972 Show fit	1.36	ENSRNOT00000073021	AABR07051611.1 Links NCBI RGD Ensembl Show fit
chr11_+_18454144 Show fit	1.32	ENSRNOT00000072550	AABR07033357.1 Links NCBI RGD Ensembl Show fit
chr1_-_37957400 Show fit	1.30	ENSRNOT00000085560 ENSRNOT00000079626 ENSRNOT00000071889	LOC102549842 Links NCBI RGD Ensembl Show fit	zinc finger protein 91-like
chr1_-_169973241 Show fit	1.29	ENSRNOT00000023315	Olr191-ps Links NCBI RGD Ensembl Show fit	olfactory receptor pseudogene 191
chr1_+_198214797 Show fit	1.28	ENSRNOT00000068543	Tbx6 Links NCBI RGD Ensembl Show fit	T-box 6
chr10_+_67810810 Show fit	1.27	ENSRNOT00000079156	Psmd11 Links NCBI RGD Ensembl Show fit	proteasome 26S subunit, non-ATPase 11
chr10_+_112056994 Show fit	1.27	ENSRNOT00000073032	Vom2r65 Links NCBI RGD Ensembl Show fit	vomeronasal 2 receptor, 65
chr7_+_122160171 Show fit	1.27	ENSRNOT00000074499	LOC100362980 Links NCBI RGD Ensembl Show fit	CG3918-like
chr16_-_49522341 Show fit	1.25	ENSRNOT00000081642	LOC100911140 Links NCBI RGD Ensembl Show fit	coiled-coil domain-containing protein 110-like
chr16_+_48513432 Show fit	1.25	ENSRNOT00000044934	LOC685135 Links NCBI RGD Ensembl Show fit	similar to NADH-ubiquinone oxidoreductase B9 subunit (Complex I-B9) (CI-B9)
chr1_-_813517 Show fit	1.23	ENSRNOT00000041332	Vom2r5 Links NCBI RGD Ensembl Show fit	vomeronasal 2 receptor, 5
chr15_-_82581916 Show fit	1.22	ENSRNOT00000057891	RGD1560069 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L27
chr7_-_16010574 Show fit	1.22	ENSRNOT00000051296	Olr996 Links NCBI RGD Ensembl Show fit	olfactory receptor 996
chr1_+_230604386 Show fit	1.21	ENSRNOT00000040608	Olr375 Links NCBI RGD Ensembl Show fit	olfactory receptor 375

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
5.0	14.9	GO:2000729	response to 3,3',5-triiodo-L-thyronine(GO:1905242) cellular response to 3,3',5-triiodo-L-thyronine(GO:1905243) positive regulation of mesenchymal cell proliferation involved in ureter development(GO:2000729)
2.8	8.4	GO:0001560	regulation of cell growth by extracellular stimulus(GO:0001560) negative regulation of beta-amyloid clearance(GO:1900222) positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000721)
2.1	6.4	GO:0001969	activation of membrane attack complex(GO:0001905) regulation of activation of membrane attack complex(GO:0001969)
1.8	5.3	GO:0046552	eye photoreceptor cell fate commitment(GO:0042706) photoreceptor cell fate commitment(GO:0046552)
1.8	8.9	GO:1905031	regulation of membrane repolarization during cardiac muscle cell action potential(GO:1905031)
1.3	5.3	GO:0009441	glycolate metabolic process(GO:0009441)
1.3	7.9	GO:0060721	regulation of spongiotrophoblast cell proliferation(GO:0060721) regulation of cell proliferation involved in embryonic placenta development(GO:0060723)
1.1	4.3	GO:1900623	extracellular polysaccharide biosynthetic process(GO:0045226) extracellular polysaccharide metabolic process(GO:0046379) positive regulation of hyaluronan biosynthetic process(GO:1900127) regulation of monocyte aggregation(GO:1900623) positive regulation of monocyte aggregation(GO:1900625)
1.1	3.2	GO:0032752	positive regulation of interleukin-3 production(GO:0032752) interleukin-3 biosynthetic process(GO:0042223) regulation of interleukin-3 biosynthetic process(GO:0045399) positive regulation of interleukin-3 biosynthetic process(GO:0045401) positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process(GO:0045425)
1.0	3.1	GO:0090024	negative regulation of granulocyte chemotaxis(GO:0071623) negative regulation of neutrophil chemotaxis(GO:0090024)
1.0	3.9	GO:0002540	leukotriene production involved in inflammatory response(GO:0002540)
0.9	6.6	GO:0030916	otic vesicle formation(GO:0030916)
0.9	9.3	GO:0006957	complement activation, alternative pathway(GO:0006957)
0.9	7.9	GO:0046642	negative regulation of alpha-beta T cell proliferation(GO:0046642)
0.9	2.6	GO:0021558	trochlear nerve development(GO:0021558)
0.8	2.4	GO:0002489	antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway(GO:0002488) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent(GO:0002489) TRAIL production(GO:0032639) regulation of TRAIL production(GO:0032679) positive regulation of TRAIL production(GO:0032759)
0.7	6.6	GO:0097084	vascular smooth muscle cell development(GO:0097084)
0.7	2.1	GO:0018199	peptidyl-glutamine modification(GO:0018199)
0.7	2.1	GO:0014739	positive regulation of muscle hyperplasia(GO:0014739)
0.7	2.6	GO:2000292	regulation of defecation(GO:2000292) negative regulation of defecation(GO:2000293)
0.7	8.5	GO:0007342	fusion of sperm to egg plasma membrane(GO:0007342)
0.6	18.1	GO:0010880	regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum(GO:0010880)
0.6	2.5	GO:0046013	regulation of T cell homeostatic proliferation(GO:0046013)
0.6	2.5	GO:0055005	ventricular cardiac myofibril assembly(GO:0055005)
0.6	6.8	GO:0014029	neural crest formation(GO:0014029)
0.5	3.2	GO:0023021	termination of signal transduction(GO:0023021)
0.5	9.4	GO:0032060	bleb assembly(GO:0032060)
0.5	1.9	GO:0050689	negative regulation of defense response to virus by host(GO:0050689)
0.4	8.7	GO:0050650	chondroitin sulfate proteoglycan biosynthetic process(GO:0050650)
0.4	2.1	GO:0031860	telomeric 3' overhang formation(GO:0031860)
0.4	2.4	GO:0072660	maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660)
0.4	2.3	GO:0097500	receptor localization to nonmotile primary cilium(GO:0097500)
0.4	4.7	GO:0021521	ventral spinal cord interneuron specification(GO:0021521) cell fate specification involved in pattern specification(GO:0060573)
0.3	1.0	GO:2000661	positive regulation of interleukin-1-mediated signaling pathway(GO:2000661)
0.3	1.0	GO:0007468	regulation of rhodopsin gene expression(GO:0007468)
0.3	1.6	GO:0021778	oligodendrocyte cell fate specification(GO:0021778) oligodendrocyte cell fate commitment(GO:0021779) glial cell fate specification(GO:0021780) positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.3	2.4	GO:0006751	glutathione catabolic process(GO:0006751)
0.3	1.3	GO:0014043	negative regulation of neuron maturation(GO:0014043)
0.2	0.7	GO:2000422	regulation of eosinophil chemotaxis(GO:2000422) positive regulation of eosinophil chemotaxis(GO:2000424)
0.2	3.9	GO:0090520	sphingolipid mediated signaling pathway(GO:0090520)
0.2	2.9	GO:0038094	Fc-gamma receptor signaling pathway(GO:0038094)
0.2	3.1	GO:0036065	fucosylation(GO:0036065)
0.2	4.7	GO:0032331	negative regulation of chondrocyte differentiation(GO:0032331)
0.2	1.1	GO:0070666	negative regulation of mast cell apoptotic process(GO:0033026) mast cell proliferation(GO:0070662) regulation of mast cell proliferation(GO:0070666) positive regulation of mast cell proliferation(GO:0070668)
0.2	1.1	GO:1990918	meiotic DNA double-strand break processing(GO:0000706) double-strand break repair involved in meiotic recombination(GO:1990918)
0.2	2.3	GO:0010944	negative regulation of transcription by competitive promoter binding(GO:0010944)
0.2	1.0	GO:0002225	positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803)
0.2	1.4	GO:0031584	activation of phospholipase D activity(GO:0031584) regulation of protein kinase C activity(GO:1900019) positive regulation of protein kinase C activity(GO:1900020)
0.2	1.6	GO:0061193	taste bud development(GO:0061193)
0.2	3.2	GO:0043248	proteasome assembly(GO:0043248)
0.2	1.5	GO:0006776	vitamin A metabolic process(GO:0006776)
0.2	1.5	GO:0060287	epithelial cilium movement involved in determination of left/right asymmetry(GO:0060287)
0.2	3.9	GO:0060512	prostate gland morphogenesis(GO:0060512)
0.2	3.7	GO:0045671	negative regulation of osteoclast differentiation(GO:0045671)
0.2	4.3	GO:0014002	astrocyte development(GO:0014002)
0.1	1.6	GO:0051151	negative regulation of smooth muscle cell differentiation(GO:0051151)
0.1	4.8	GO:0046329	negative regulation of JNK cascade(GO:0046329)
0.1	1.7	GO:0042118	endothelial cell activation(GO:0042118)
0.1	0.4	GO:0097198	histone H3-K36 trimethylation(GO:0097198)
0.1	9.8	GO:0032233	positive regulation of actin filament bundle assembly(GO:0032233)
0.1	1.5	GO:0046884	follicle-stimulating hormone secretion(GO:0046884)
0.1	0.8	GO:0031848	protection from non-homologous end joining at telomere(GO:0031848)
0.1	2.6	GO:0035404	histone-serine phosphorylation(GO:0035404)
0.1	1.7	GO:0006337	nucleosome disassembly(GO:0006337)
0.1	1.5	GO:1901409	positive regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901409)
0.1	7.1	GO:0048662	negative regulation of smooth muscle cell proliferation(GO:0048662)
0.1	0.9	GO:0010572	positive regulation of platelet activation(GO:0010572)
0.1	0.7	GO:0032873	negative regulation of stress-activated MAPK cascade(GO:0032873) negative regulation of stress-activated protein kinase signaling cascade(GO:0070303)
0.1	0.7	GO:0007262	STAT protein import into nucleus(GO:0007262)
0.1	1.3	GO:0021513	spinal cord dorsal/ventral patterning(GO:0021513)
0.1	0.3	GO:0090310	negative regulation of methylation-dependent chromatin silencing(GO:0090310)
0.1	3.7	GO:0042462	eye photoreceptor cell development(GO:0042462)
0.1	1.0	GO:0007195	adenylate cyclase-inhibiting dopamine receptor signaling pathway(GO:0007195)
0.1	1.0	GO:0097264	self proteolysis(GO:0097264)
0.1	2.1	GO:0009954	proximal/distal pattern formation(GO:0009954)
0.1	1.0	GO:0043518	negative regulation of DNA damage response, signal transduction by p53 class mediator(GO:0043518)
0.1	2.5	GO:2000279	negative regulation of DNA biosynthetic process(GO:2000279)
0.1	2.0	GO:0032728	positive regulation of interferon-beta production(GO:0032728)
0.1	12.6	GO:0006941	striated muscle contraction(GO:0006941)
0.1	1.6	GO:0030513	positive regulation of BMP signaling pathway(GO:0030513)
0.1	2.3	GO:0021983	pituitary gland development(GO:0021983)
0.1	1.0	GO:0006517	protein deglycosylation(GO:0006517)
0.1	1.1	GO:0036342	post-anal tail morphogenesis(GO:0036342)
0.1	2.1	GO:0045070	positive regulation of viral genome replication(GO:0045070)
0.1	4.3	GO:0030901	midbrain development(GO:0030901)
0.1	1.8	GO:0032814	regulation of natural killer cell activation(GO:0032814)
0.0	0.4	GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest(GO:0006977)
0.0	2.5	GO:0002181	cytoplasmic translation(GO:0002181)
0.0	1.4	GO:0006383	transcription from RNA polymerase III promoter(GO:0006383)
0.0	0.2	GO:0043569	negative regulation of insulin-like growth factor receptor signaling pathway(GO:0043569)
0.0	2.8	GO:0010923	negative regulation of phosphatase activity(GO:0010923)
0.0	1.1	GO:0006730	one-carbon metabolic process(GO:0006730)
0.0	2.9	GO:1903955	positive regulation of protein targeting to mitochondrion(GO:1903955)
0.0	0.5	GO:0006656	phosphatidylcholine biosynthetic process(GO:0006656)
0.0	2.1	GO:0007569	cell aging(GO:0007569)
0.0	0.4	GO:0043651	linoleic acid metabolic process(GO:0043651)
0.0	0.1	GO:1903215	negative regulation of protein targeting to mitochondrion(GO:1903215)
0.0	0.5	GO:0061014	positive regulation of mRNA catabolic process(GO:0061014)
0.0	0.2	GO:0051095	regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0	1.0	GO:0006891	intra-Golgi vesicle-mediated transport(GO:0006891)
0.0	27.6	GO:0050911	detection of chemical stimulus involved in sensory perception of smell(GO:0050911)
0.0	2.1	GO:0006413	translational initiation(GO:0006413)
0.0	0.1	GO:2000253	positive regulation of feeding behavior(GO:2000253)
0.0	0.1	GO:0007207	adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway(GO:0007197) phospholipase C-activating G-protein coupled acetylcholine receptor signaling pathway(GO:0007207)
0.0	0.8	GO:0007129	synapsis(GO:0007129)
0.0	0.6	GO:0007040	lysosome organization(GO:0007040) lytic vacuole organization(GO:0080171)
0.0	1.2	GO:0008203	cholesterol metabolic process(GO:0008203)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
6.0	18.1	GO:0014801	longitudinal sarcoplasmic reticulum(GO:0014801)
2.5	12.6	GO:0005927	muscle tendon junction(GO:0005927)
1.0	6.2	GO:0016012	sarcoglycan complex(GO:0016012)
0.9	6.4	GO:0005579	membrane attack complex(GO:0005579)
0.8	2.4	GO:0032398	MHC class Ib protein complex(GO:0032398)
0.6	3.9	GO:0036128	CatSper complex(GO:0036128)
0.4	3.9	GO:0005641	nuclear envelope lumen(GO:0005641)
0.4	12.0	GO:0097440	apical dendrite(GO:0097440)
0.4	3.2	GO:0008541	proteasome regulatory particle, lid subcomplex(GO:0008541)
0.4	1.4	GO:0042585	germinal vesicle(GO:0042585) dendritic branch(GO:0044307)
0.3	2.3	GO:0042406	extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.3	8.5	GO:0002080	acrosomal membrane(GO:0002080)
0.3	2.1	GO:0030870	Mre11 complex(GO:0030870)
0.2	1.0	GO:0097209	epidermal lamellar body(GO:0097209)
0.2	2.6	GO:0070852	cell body fiber(GO:0070852)
0.2	2.7	GO:0035686	sperm fibrous sheath(GO:0035686)
0.1	2.6	GO:0031588	nucleotide-activated protein kinase complex(GO:0031588)
0.1	4.6	GO:0031519	PcG protein complex(GO:0031519)
0.1	22.9	GO:0030018	Z disc(GO:0030018)
0.1	2.8	GO:0005665	DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1	3.3	GO:0031528	microvillus membrane(GO:0031528)
0.1	2.1	GO:0005845	mRNA cap binding complex(GO:0005845)
0.1	1.9	GO:0031362	anchored component of external side of plasma membrane(GO:0031362)
0.1	1.4	GO:0005666	DNA-directed RNA polymerase III complex(GO:0005666)
0.1	3.1	GO:0009925	basal plasma membrane(GO:0009925)
0.1	2.3	GO:1902711	GABA-A receptor complex(GO:1902711)
0.1	37.3	GO:0005578	proteinaceous extracellular matrix(GO:0005578)
0.1	1.6	GO:0030061	mitochondrial crista(GO:0030061)
0.1	0.8	GO:0070419	nonhomologous end joining complex(GO:0070419)
0.1	9.3	GO:0072562	blood microparticle(GO:0072562)
0.1	8.1	GO:0022625	cytosolic large ribosomal subunit(GO:0022625)
0.1	4.8	GO:0017053	transcriptional repressor complex(GO:0017053)
0.1	3.9	GO:0045171	intercellular bridge(GO:0045171)
0.1	3.7	GO:0001917	photoreceptor inner segment(GO:0001917)
0.1	2.1	GO:0001891	phagocytic cup(GO:0001891)
0.1	5.5	GO:0000118	histone deacetylase complex(GO:0000118)
0.1	1.2	GO:0034364	high-density lipoprotein particle(GO:0034364)
0.1	22.4	GO:0005667	transcription factor complex(GO:0005667)
0.1	1.5	GO:0005771	multivesicular body(GO:0005771)
0.1	0.7	GO:0017101	aminoacyl-tRNA synthetase multienzyme complex(GO:0017101)
0.0	3.6	GO:0005788	endoplasmic reticulum lumen(GO:0005788)
0.0	2.6	GO:0032580	Golgi cisterna membrane(GO:0032580)
0.0	1.5	GO:0000307	cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0	0.6	GO:0017119	Golgi transport complex(GO:0017119)
0.0	1.3	GO:0032154	cleavage furrow(GO:0032154) cell surface furrow(GO:0097610)
0.0	2.1	GO:0005902	microvillus(GO:0005902)
0.0	1.5	GO:0097517	stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517)
0.0	0.4	GO:0030126	COPI vesicle coat(GO:0030126)
0.0	7.0	GO:0009897	external side of plasma membrane(GO:0009897)
0.0	2.8	GO:0005923	bicellular tight junction(GO:0005923)
0.0	6.0	GO:0000790	nuclear chromatin(GO:0000790)
0.0	5.4	GO:0031965	nuclear membrane(GO:0031965)
0.0	1.1	GO:0005762	organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762)
0.0	1.3	GO:0045095	keratin filament(GO:0045095)
0.0	2.1	GO:0031012	extracellular matrix(GO:0031012)
0.0	0.4	GO:0000159	protein phosphatase type 2A complex(GO:0000159)
0.0	1.0	GO:0099501	synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501)
0.0	0.1	GO:0005796	Golgi lumen(GO:0005796)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.5	8.9	GO:0034988	Fc-gamma receptor I complex binding(GO:0034988)
1.3	5.3	GO:0003973	(S)-2-hydroxy-acid oxidase activity(GO:0003973)
1.3	3.9	GO:0004051	arachidonate 5-lipoxygenase activity(GO:0004051)
1.2	3.7	GO:0016316	phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity(GO:0016316)
1.0	3.1	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
1.0	3.1	GO:0001847	opsonin receptor activity(GO:0001847)
1.0	2.9	GO:0051733	ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity(GO:0046404) polydeoxyribonucleotide kinase activity(GO:0051733) ATP-dependent polynucleotide kinase activity(GO:0051734)
0.9	4.3	GO:0050501	hyaluronan synthase activity(GO:0050501)
0.8	18.1	GO:0004745	retinol dehydrogenase activity(GO:0004745)
0.8	3.2	GO:0019863	IgE binding(GO:0019863)
0.8	5.4	GO:0030881	beta-2-microglobulin binding(GO:0030881)
0.7	2.6	GO:0043404	corticotrophin-releasing factor receptor activity(GO:0015056) corticotropin-releasing hormone receptor activity(GO:0043404)
0.6	9.8	GO:0051371	muscle alpha-actinin binding(GO:0051371)
0.6	1.7	GO:0001087	transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.5	14.9	GO:0001223	transcription coactivator binding(GO:0001223)
0.5	2.5	GO:1990932	5.8S rRNA binding(GO:1990932)
0.4	1.6	GO:0008597	calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.4	2.4	GO:0036374	gamma-glutamyltransferase activity(GO:0003840) glutathione hydrolase activity(GO:0036374)
0.3	1.0	GO:0004909	interleukin-1, Type I, activating receptor activity(GO:0004909)
0.3	21.1	GO:0005201	extracellular matrix structural constituent(GO:0005201)
0.3	2.3	GO:0043426	MRF binding(GO:0043426)
0.3	10.9	GO:0035035	histone acetyltransferase binding(GO:0035035)
0.2	6.1	GO:0004181	metallocarboxypeptidase activity(GO:0004181)
0.2	6.6	GO:0003785	actin monomer binding(GO:0003785)
0.2	1.9	GO:0046703	natural killer cell lectin-like receptor binding(GO:0046703)
0.2	2.1	GO:0003810	protein-glutamine gamma-glutamyltransferase activity(GO:0003810)
0.2	6.8	GO:0001103	RNA polymerase II repressing transcription factor binding(GO:0001103)
0.2	2.4	GO:0004499	N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.2	1.6	GO:0005169	neurotrophin TRKB receptor binding(GO:0005169)
0.2	4.0	GO:0071837	HMG box domain binding(GO:0071837)
0.2	2.6	GO:0004679	AMP-activated protein kinase activity(GO:0004679)
0.2	2.3	GO:0005237	inhibitory extracellular ligand-gated ion channel activity(GO:0005237)
0.2	1.5	GO:0019841	retinol binding(GO:0019841)
0.2	1.1	GO:0004064	arylesterase activity(GO:0004064)
0.2	1.1	GO:0005173	stem cell factor receptor binding(GO:0005173)
0.2	10.2	GO:0005544	calcium-dependent phospholipid binding(GO:0005544)
0.1	18.1	GO:0001078	transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078)
0.1	0.4	GO:0008405	arachidonic acid 11,12-epoxygenase activity(GO:0008405)
0.1	2.5	GO:0017147	Wnt-protein binding(GO:0017147)
0.1	2.0	GO:0097602	cullin family protein binding(GO:0097602)
0.1	0.7	GO:0005148	prolactin receptor binding(GO:0005148)
0.1	1.7	GO:0003688	DNA replication origin binding(GO:0003688)
0.1	2.8	GO:0001106	RNA polymerase II transcription corepressor activity(GO:0001106)
0.1	0.8	GO:0035312	5'-3' exodeoxyribonuclease activity(GO:0035312)
0.1	4.7	GO:0005109	frizzled binding(GO:0005109)
0.1	2.1	GO:0004697	protein kinase C activity(GO:0004697)
0.1	0.9	GO:0008517	folic acid transporter activity(GO:0008517)
0.1	1.0	GO:0001591	dopamine neurotransmitter receptor activity, coupled via Gi/Go(GO:0001591)
0.1	3.1	GO:0004003	ATP-dependent DNA helicase activity(GO:0004003)
0.1	1.0	GO:0043522	leucine zipper domain binding(GO:0043522)
0.1	0.3	GO:0070579	methylcytosine dioxygenase activity(GO:0070579)
0.1	3.2	GO:0001965	G-protein alpha-subunit binding(GO:0001965)
0.1	8.3	GO:0004222	metalloendopeptidase activity(GO:0004222)
0.1	0.8	GO:0030983	mismatched DNA binding(GO:0030983)
0.1	13.9	GO:0004252	serine-type endopeptidase activity(GO:0004252)
0.1	7.2	GO:0004867	serine-type endopeptidase inhibitor activity(GO:0004867)
0.1	0.4	GO:0035375	zymogen binding(GO:0035375)
0.1	7.9	GO:0004702	receptor signaling protein serine/threonine kinase activity(GO:0004702)
0.1	1.0	GO:0048156	tau protein binding(GO:0048156)
0.1	2.5	GO:0030544	Hsp70 protein binding(GO:0030544)
0.0	1.5	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0	1.2	GO:0019213	deacetylase activity(GO:0019213)
0.0	4.8	GO:0003714	transcription corepressor activity(GO:0003714)
0.0	1.8	GO:0005080	protein kinase C binding(GO:0005080)
0.0	2.1	GO:0003743	translation initiation factor activity(GO:0003743)
0.0	2.3	GO:0001158	enhancer sequence-specific DNA binding(GO:0001158)
0.0	0.4	GO:0048018	receptor agonist activity(GO:0048018)
0.0	2.1	GO:0001227	transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0	2.1	GO:0031072	heat shock protein binding(GO:0031072)
0.0	3.2	GO:0005178	integrin binding(GO:0005178)
0.0	1.4	GO:0030971	receptor tyrosine kinase binding(GO:0030971)
0.0	0.2	GO:0004445	inositol-polyphosphate 5-phosphatase activity(GO:0004445)
0.0	6.8	GO:0003735	structural constituent of ribosome(GO:0003735)
0.0	2.0	GO:0030594	neurotransmitter receptor activity(GO:0030594)
0.0	25.7	GO:0004984	olfactory receptor activity(GO:0004984)
0.0	0.7	GO:0004812	aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.0	2.4	GO:0052689	carboxylic ester hydrolase activity(GO:0052689)
0.0	0.5	GO:0015485	cholesterol binding(GO:0015485)
0.0	0.5	GO:0005504	fatty acid binding(GO:0005504)
0.0	4.7	GO:0005198	structural molecule activity(GO:0005198)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.5	9.3	ST G ALPHA S PATHWAY	G alpha s Pathway
0.2	8.9	PID WNT NONCANONICAL PATHWAY	Noncanonical Wnt signaling pathway
0.2	7.1	NABA PROTEOGLYCANS	Genes encoding proteoglycans
0.1	7.9	PID TNF PATHWAY	TNF receptor signaling pathway
0.1	2.9	PID RHODOPSIN PATHWAY	Visual signal transduction: Rods
0.1	16.3	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.1	2.5	PID INTEGRIN A9B1 PATHWAY	Alpha9 beta1 integrin signaling events
0.1	6.8	PID RB 1PATHWAY	Regulation of retinoblastoma protein
0.1	3.9	PID TAP63 PATHWAY	Validated transcriptional targets of TAp63 isoforms
0.1	2.9	PID ATM PATHWAY	ATM pathway
0.1	2.5	PID P38 ALPHA BETA DOWNSTREAM PATHWAY	Signaling mediated by p38-alpha and p38-beta
0.1	1.0	ST P38 MAPK PATHWAY	p38 MAPK Pathway
0.0	1.6	PID TCR CALCIUM PATHWAY	Calcium signaling in the CD4+ TCR pathway
0.0	10.0	NABA ECM REGULATORS	Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
0.0	1.1	PID INTEGRIN A4B1 PATHWAY	Alpha4 beta1 integrin signaling events
0.0	1.1	PID KIT PATHWAY	Signaling events mediated by Stem cell factor receptor (c-Kit)
0.0	2.8	PID BETA CATENIN NUC PATHWAY	Regulation of nuclear beta catenin signaling and target gene transcription
0.0	3.7	PID PDGFRB PATHWAY	PDGFR-beta signaling pathway
0.0	2.3	PID HIF1 TFPATHWAY	HIF-1-alpha transcription factor network
0.0	0.7	PID PTP1B PATHWAY	Signaling events mediated by PTP1B
0.0	1.6	PID AJDISS 2PATHWAY	Posttranslational regulation of adherens junction stability and dissassembly
0.0	0.2	PID EPHA2 FWD PATHWAY	EPHA2 forward signaling
0.0	1.9	PID FCER1 PATHWAY	Fc-epsilon receptor I signaling in mast cells
0.0	0.8	PID ARF6 PATHWAY	Arf6 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.7	9.3	REACTOME REGULATION OF COMPLEMENT CASCADE	Genes involved in Regulation of Complement cascade
0.5	7.1	REACTOME KERATAN SULFATE DEGRADATION	Genes involved in Keratan sulfate degradation
0.3	13.1	REACTOME STRIATED MUSCLE CONTRACTION	Genes involved in Striated Muscle Contraction
0.3	6.4	REACTOME COMPLEMENT CASCADE	Genes involved in Complement cascade
0.3	3.7	REACTOME SYNTHESIS OF PIPS AT THE EARLY ENDOSOME MEMBRANE	Genes involved in Synthesis of PIPs at the early endosome membrane
0.3	4.3	REACTOME HYALURONAN METABOLISM	Genes involved in Hyaluronan metabolism
0.2	1.4	REACTOME OLFACTORY SIGNALING PATHWAY	Genes involved in Olfactory Signaling Pathway
0.2	6.3	REACTOME MYOGENESIS	Genes involved in Myogenesis
0.1	1.5	REACTOME GLYCOPROTEIN HORMONES	Genes involved in Glycoprotein hormones
0.1	1.4	REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE	Genes involved in Regulation of Insulin Secretion by Acetylcholine
0.1	1.1	REACTOME REGULATION OF KIT SIGNALING	Genes involved in Regulation of KIT signaling
0.1	7.0	REACTOME COSTIMULATION BY THE CD28 FAMILY	Genes involved in Costimulation by the CD28 family
0.1	2.3	REACTOME LIGAND GATED ION CHANNEL TRANSPORT	Genes involved in Ligand-gated ion channel transport
0.1	2.4	REACTOME GLUTATHIONE CONJUGATION	Genes involved in Glutathione conjugation
0.1	1.4	REACTOME RNA POL III CHAIN ELONGATION	Genes involved in RNA Polymerase III Chain Elongation
0.1	1.6	REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS	Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.1	3.2	REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G	Genes involved in Vif-mediated degradation of APOBEC3G
0.1	2.1	REACTOME SIGNALING BY PDGF	Genes involved in Signaling by PDGF
0.1	1.8	REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS	Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus
0.1	3.2	REACTOME G ALPHA I SIGNALLING EVENTS	Genes involved in G alpha (i) signalling events
0.1	2.3	REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION	Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.1	0.7	REACTOME ROLE OF DCC IN REGULATING APOPTOSIS	Genes involved in Role of DCC in regulating apoptosis
0.0	1.5	REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D	Genes involved in Metabolism of steroid hormones and vitamins A and D
0.0	1.0	REACTOME G0 AND EARLY G1	Genes involved in G0 and Early G1
0.0	0.7	REACTOME PROLACTIN RECEPTOR SIGNALING	Genes involved in Prolactin receptor signaling
0.0	0.7	REACTOME MITOCHONDRIAL TRNA AMINOACYLATION	Genes involved in Mitochondrial tRNA aminoacylation
0.0	0.4	REACTOME VEGF LIGAND RECEPTOR INTERACTIONS	Genes involved in VEGF ligand-receptor interactions
0.0	0.4	REACTOME COPI MEDIATED TRANSPORT	Genes involved in COPI Mediated Transport
0.0	1.0	REACTOME IL1 SIGNALING	Genes involved in Interleukin-1 signaling
0.0	2.1	REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES	Genes involved in Antiviral mechanism by IFN-stimulated genes
0.0	2.5	REACTOME PEPTIDE CHAIN ELONGATION	Genes involved in Peptide chain elongation
0.0	0.8	REACTOME MEIOTIC RECOMBINATION	Genes involved in Meiotic Recombination