GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Tcf7l1 Links NCBI RGD Ensembl	ENSRNOG00000014753	transcription factor 7 like 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Tcf7l1	rn6_v1_chr4_-_100660140_100660140	0.45	1.2e-17	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr10_-_37645802 Show fit	17.11	ENSRNOT00000008022	Tcf7 Links NCBI RGD Ensembl Show fit	transcription factor 7 (T-cell specific, HMG-box)
chr6_-_99843245 Show fit	11.78	ENSRNOT00000080270	Gpx2 Links NCBI RGD Ensembl Show fit	glutathione peroxidase 2
chr9_-_93404883 Show fit	11.09	ENSRNOT00000025024	Nmur1 Links NCBI RGD Ensembl Show fit	neuromedin U receptor 1
chr5_-_58987760 Show fit	10.77	ENSRNOT00000035040	Sit1 Links NCBI RGD Ensembl Show fit	signaling threshold regulating transmembrane adaptor 1
chr17_+_47870611 Show fit	10.07	ENSRNOT00000078555	AABR07027872.1 Links NCBI RGD Ensembl Show fit
chr20_-_31597830 Show fit	9.70	ENSRNOT00000085877	Col13a1 Links NCBI RGD Ensembl Show fit	collagen type XIII alpha 1 chain
chr13_+_83996080 Show fit	9.49	ENSRNOT00000004403 ENSRNOT00000070958	Cd247 Links NCBI RGD Ensembl Show fit	Cd247 molecule
chrX_-_159891326 Show fit	9.13	ENSRNOT00000001154	Rbmx Links NCBI RGD Ensembl Show fit	RNA binding motif protein, X-linked
chr7_-_116201756 Show fit	9.00	ENSRNOT00000091401	Cyp11b2 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 11, subfamily b, polypeptide 2
chr20_-_31598118 Show fit	8.89	ENSRNOT00000046537	Col13a1 Links NCBI RGD Ensembl Show fit	collagen type XIII alpha 1 chain
chr3_-_51297852 Show fit	8.22	ENSRNOT00000001607	Cobll1 Links NCBI RGD Ensembl Show fit	cordon-bleu WH2 repeat protein-like 1
chr12_+_24761210 Show fit	8.08	ENSRNOT00000002003	Cldn4 Links NCBI RGD Ensembl Show fit	claudin 4
chr4_+_14071507 Show fit	8.05	ENSRNOT00000066224 ENSRNOT00000075962	Cd36 Links NCBI RGD Ensembl Show fit RGD1565355 Links NCBI RGD Ensembl Show fit	CD36 molecule similar to fatty acid translocase/CD36
chr15_-_52214616 Show fit	7.98	ENSRNOT00000015035	Sftpc Links NCBI RGD Ensembl Show fit	surfactant protein C
chr15_-_41338284 Show fit	7.73	ENSRNOT00000077225	Tnfrsf19 Links NCBI RGD Ensembl Show fit	TNF receptor superfamily member 19
chr13_+_53351717 Show fit	7.65	ENSRNOT00000012038	Kif14 Links NCBI RGD Ensembl Show fit	kinesin family member 14
chr10_+_31146107 Show fit	7.51	ENSRNOT00000008184	Adam19 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 19
chr3_+_110855000 Show fit	7.42	ENSRNOT00000081613	Knl1 Links NCBI RGD Ensembl Show fit	kinetochore scaffold 1
chr4_-_151516894 Show fit	7.02	ENSRNOT00000011044	Wnt5b Links NCBI RGD Ensembl Show fit	wingless-type MMTV integration site family, member 5B
chr1_+_101214593 Show fit	6.97	ENSRNOT00000028086	Tead2 Links NCBI RGD Ensembl Show fit	TEA domain transcription factor 2
chr4_+_14001761 Show fit	6.82	ENSRNOT00000076519	Cd36 Links NCBI RGD Ensembl Show fit	CD36 molecule
chr4_+_14151343 Show fit	6.61	ENSRNOT00000061687 ENSRNOT00000076573 ENSRNOT00000077219 ENSRNOT00000008319	Cd36 Links NCBI RGD Ensembl Show fit	CD36 molecule
chr4_+_78283026 Show fit	6.61	ENSRNOT00000059173	Gimap8 Links NCBI RGD Ensembl Show fit	GTPase, IMAP family member 8
chr4_+_14213587 Show fit	6.42	ENSRNOT00000067543	LOC103690020 Links NCBI RGD Ensembl Show fit	platelet glycoprotein 4-like
chr18_-_15089988 Show fit	6.38	ENSRNOT00000074116	Mep1b Links NCBI RGD Ensembl Show fit	meprin A subunit beta
chr3_-_55822551 Show fit	6.12	ENSRNOT00000082624	Lrp2 Links NCBI RGD Ensembl Show fit	LDL receptor related protein 2
chr10_+_56453877 Show fit	6.05	ENSRNOT00000031640	Plscr3 Links NCBI RGD Ensembl Show fit	phospholipid scramblase 3
chr4_+_92431710 Show fit	5.97	ENSRNOT00000049438	LOC108350839 Links NCBI RGD Ensembl Show fit	high mobility group protein B1-like
chr5_+_71742911 Show fit	5.93	ENSRNOT00000047225	Zfp462 Links NCBI RGD Ensembl Show fit	zinc finger protein 462
chr8_+_22648323 Show fit	5.78	ENSRNOT00000013165	Smarca4 Links NCBI RGD Ensembl Show fit	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
chr9_+_46657922 Show fit	5.64	ENSRNOT00000019180	Map4k4 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase kinase 4
chr6_-_18351536 Show fit	5.56	ENSRNOT00000061588	Crnkl1 Links NCBI RGD Ensembl Show fit	crooked neck pre-mRNA splicing factor 1
chr3_+_149741312 Show fit	5.51	ENSRNOT00000070854	LOC100911637 Links NCBI RGD Ensembl Show fit	high mobility group protein B1-like
chr9_+_46657575 Show fit	5.46	ENSRNOT00000083322	Map4k4 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase kinase 4
chr7_-_132984110 Show fit	5.40	ENSRNOT00000046626	Hmgb1-ps3 Links NCBI RGD Ensembl Show fit	high mobility group box 1, pseudogene 3
chr7_+_144628120 Show fit	5.36	ENSRNOT00000022247	Hoxc5 Links NCBI RGD Ensembl Show fit	homeo box C5
chr10_+_75365822 Show fit	5.35	ENSRNOT00000055705	Vezf1 Links NCBI RGD Ensembl Show fit	vascular endothelial zinc finger 1
chr4_-_77347011 Show fit	5.28	ENSRNOT00000008149	Ezh2 Links NCBI RGD Ensembl Show fit	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr3_+_172856733 Show fit	5.23	ENSRNOT00000009826	Edn3 Links NCBI RGD Ensembl Show fit	endothelin 3
chr10_-_109840047 Show fit	5.21	ENSRNOT00000054947	Notum Links NCBI RGD Ensembl Show fit	NOTUM, palmitoleoyl-protein carboxylesterase
chr2_-_250235435 Show fit	5.18	ENSRNOT00000088618	Lmo4 Links NCBI RGD Ensembl Show fit	LIM domain only 4
chr13_+_5480150 Show fit	5.18	ENSRNOT00000057873	AABR07019870.1 Links NCBI RGD Ensembl Show fit
chr1_-_89509343 Show fit	5.14	ENSRNOT00000028637	Fxyd3 Links NCBI RGD Ensembl Show fit	FXYD domain-containing ion transport regulator 3
chr7_-_140291620 Show fit	4.96	ENSRNOT00000088323	Adcy6 Links NCBI RGD Ensembl Show fit	adenylate cyclase 6
chr1_-_218100272 Show fit	4.86	ENSRNOT00000028411 ENSRNOT00000088588	Ccnd1 Links NCBI RGD Ensembl Show fit	cyclin D1
chr16_+_37500017 Show fit	4.85	ENSRNOT00000081634	AC135696.1 Links NCBI RGD Ensembl Show fit	high mobility group box 1 (Hmgb1), mRNA
chr3_+_149790856 Show fit	4.71	ENSRNOT00000075275	LOC100911637 Links NCBI RGD Ensembl Show fit	high mobility group protein B1-like
chr17_+_9596957 Show fit	4.66	ENSRNOT00000017349	Fam193b Links NCBI RGD Ensembl Show fit	family with sequence similarity 193, member B
chr20_+_4039413 Show fit	4.64	ENSRNOT00000082136	RT1-Bb Links NCBI RGD Ensembl Show fit	RT1 class II, locus Bb
chr3_+_154043873 Show fit	4.45	ENSRNOT00000072502 ENSRNOT00000034166	Nnat Links NCBI RGD Ensembl Show fit	neuronatin
chr4_+_44321883 Show fit	4.44	ENSRNOT00000091095	Tes Links NCBI RGD Ensembl Show fit	testin LIM domain protein
chr4_-_60548021 Show fit	4.20	ENSRNOT00000065546	AABR07060165.1 Links NCBI RGD Ensembl Show fit
chr10_-_34961349 Show fit	4.18	ENSRNOT00000004885	LOC103689931 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein A/B
chr7_-_140640953 Show fit	4.18	ENSRNOT00000083156	Tuba1a Links NCBI RGD Ensembl Show fit	tubulin, alpha 1A
chr19_-_59985494 Show fit	4.12	ENSRNOT00000086591	Hmg1l1 Links NCBI RGD Ensembl Show fit	high-mobility group (nonhistone chromosomal) protein 1-like 1
chr5_-_16799776 Show fit	4.08	ENSRNOT00000011721	Plag1 Links NCBI RGD Ensembl Show fit	PLAG1 zinc finger
chr2_-_147693082 Show fit	3.95	ENSRNOT00000022507	Wwtr1 Links NCBI RGD Ensembl Show fit	WW domain containing transcription regulator 1
chr5_+_155660553 Show fit	3.92	ENSRNOT00000081893	Wnt4 Links NCBI RGD Ensembl Show fit	wingless-type MMTV integration site family, member 4
chr18_-_80865584 Show fit	3.90	ENSRNOT00000021750	Tshz1 Links NCBI RGD Ensembl Show fit	teashirt zinc finger homeobox 1
chr16_+_10727571 Show fit	3.76	ENSRNOT00000084422	Mmrn2 Links NCBI RGD Ensembl Show fit	multimerin 2
chr10_-_56831243 Show fit	3.73	ENSRNOT00000025403	Slc16a13 Links NCBI RGD Ensembl Show fit	solute carrier family 16, member 13
chr3_-_161498951 Show fit	3.73	ENSRNOT00000024214	Ncoa5 Links NCBI RGD Ensembl Show fit	nuclear receptor coactivator 5
chr10_-_88172910 Show fit	3.71	ENSRNOT00000046956	Krt42 Links NCBI RGD Ensembl Show fit	keratin 42
chr5_-_144479306 Show fit	3.68	ENSRNOT00000087697	Ago1 Links NCBI RGD Ensembl Show fit	argonaute 1, RISC catalytic component
chr10_+_89358376 Show fit	3.67	ENSRNOT00000028067	Ifi35 Links NCBI RGD Ensembl Show fit	interferon-induced protein 35
chr2_+_196013799 Show fit	3.62	ENSRNOT00000084023	Pogz Links NCBI RGD Ensembl Show fit	pogo transposable element with ZNF domain
chr5_-_50362344 Show fit	3.61	ENSRNOT00000035808	Zfp292 Links NCBI RGD Ensembl Show fit	zinc finger protein 292
chr1_-_170628915 Show fit	3.58	ENSRNOT00000042865	Dchs1 Links NCBI RGD Ensembl Show fit	dachsous cadherin-related 1
chr5_-_150167077 Show fit	3.55	ENSRNOT00000088493 ENSRNOT00000013761 ENSRNOT00000067349 ENSRNOT00000051097 ENSRNOT00000067189	Epb41 Links NCBI RGD Ensembl Show fit	erythrocyte membrane protein band 4.1
chr17_-_86657473 Show fit	3.45	ENSRNOT00000078827	AABR07028795.1 Links NCBI RGD Ensembl Show fit
chr1_+_141986145 Show fit	3.35	ENSRNOT00000030914	Sema4b Links NCBI RGD Ensembl Show fit	semaphorin 4B
chr1_+_187149453 Show fit	3.34	ENSRNOT00000082738	Xylt1 Links NCBI RGD Ensembl Show fit	xylosyltransferase 1
chr2_+_142686724 Show fit	3.28	ENSRNOT00000014614	Proser1 Links NCBI RGD Ensembl Show fit	proline and serine rich 1
chr8_+_118206698 Show fit	3.22	ENSRNOT00000082607 ENSRNOT00000064140	Smarcc1 Links NCBI RGD Ensembl Show fit	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
chr3_+_21764377 Show fit	3.10	ENSRNOT00000063938	Gpr21 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 21
chr18_+_79773608 Show fit	3.03	ENSRNOT00000088484	Zfp516 Links NCBI RGD Ensembl Show fit	zinc finger protein 516
chr12_+_9728486 Show fit	3.03	ENSRNOT00000001263	Lnx2 Links NCBI RGD Ensembl Show fit	ligand of numb-protein X 2
chr20_-_27208041 Show fit	2.96	ENSRNOT00000084720	Rufy2 Links NCBI RGD Ensembl Show fit	RUN and FYVE domain containing 2
chr19_+_39543242 Show fit	2.92	ENSRNOT00000018837	Wwp2 Links NCBI RGD Ensembl Show fit	WW domain containing E3 ubiquitin protein ligase 2
chr1_+_84304228 Show fit	2.90	ENSRNOT00000024771	Prx Links NCBI RGD Ensembl Show fit	periaxin
chr6_-_138068648 Show fit	2.85	ENSRNOT00000081908	Ighm Links NCBI RGD Ensembl Show fit	immunoglobulin heavy constant mu
chr5_-_147953093 Show fit	2.80	ENSRNOT00000075270	Khdrbs1 Links NCBI RGD Ensembl Show fit	KH RNA binding domain containing, signal transduction associated 1
chr5_-_131860637 Show fit	2.78	ENSRNOT00000064569 ENSRNOT00000080242	Slc5a9 Links NCBI RGD Ensembl Show fit	solute carrier family 5 member 9
chr8_+_111210811 Show fit	2.76	ENSRNOT00000011347	Amotl2 Links NCBI RGD Ensembl Show fit	angiomotin like 2
chr2_+_179952227 Show fit	2.76	ENSRNOT00000015081	Pdgfc Links NCBI RGD Ensembl Show fit	platelet derived growth factor C
chr4_+_78240385 Show fit	2.76	ENSRNOT00000011041	Zfp775 Links NCBI RGD Ensembl Show fit	zinc finger protein 775
chr1_-_266086299 Show fit	2.76	ENSRNOT00000026609	Cuedc2 Links NCBI RGD Ensembl Show fit	CUE domain containing 2
chr1_-_178367828 Show fit	2.73	ENSRNOT00000050823	AABR07071968.1 Links NCBI RGD Ensembl Show fit
chr6_-_43493816 Show fit	2.65	ENSRNOT00000077786	Ywhaq Links NCBI RGD Ensembl Show fit	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta
chr2_-_94903226 Show fit	2.63	ENSRNOT00000015194	AABR07009373.1 Links NCBI RGD Ensembl Show fit
chr6_-_1622196 Show fit	2.60	ENSRNOT00000007492	Prkd3 Links NCBI RGD Ensembl Show fit	protein kinase D3
chr1_-_84008293 Show fit	2.59	ENSRNOT00000002053	Snrpa Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein polypeptide A
chrX_-_118513061 Show fit	2.57	ENSRNOT00000043338	Il13ra2 Links NCBI RGD Ensembl Show fit	interleukin 13 receptor subunit alpha 2
chr2_+_208738132 Show fit	2.56	ENSRNOT00000023972	AABR07012795.1 Links NCBI RGD Ensembl Show fit
chr9_-_116222374 Show fit	2.55	ENSRNOT00000090111 ENSRNOT00000067900	Arhgap28 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 28
chr9_-_100306194 Show fit	2.52	ENSRNOT00000087584	RGD1563692 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein FLJ22671
chr3_+_148541909 Show fit	2.49	ENSRNOT00000012187	Ccm2l Links NCBI RGD Ensembl Show fit	CCM2 like scaffolding protein
chr9_-_44126919 Show fit	2.48	ENSRNOT00000024701	Mgat4a Links NCBI RGD Ensembl Show fit	mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
chr7_+_12256387 Show fit	2.46	ENSRNOT00000021939	RGD1359127 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 2310011J03
chr4_+_57019941 Show fit	2.42	ENSRNOT00000011356	Smo Links NCBI RGD Ensembl Show fit	smoothened, frizzled class receptor
chr7_+_144605058 Show fit	2.38	ENSRNOT00000031404	Hoxc8 Links NCBI RGD Ensembl Show fit	homeobox C8
chr16_-_74264142 Show fit	2.35	ENSRNOT00000026067	Dkk4 Links NCBI RGD Ensembl Show fit	dickkopf WNT signaling pathway inhibitor 4
chr13_-_70922245 Show fit	2.33	ENSRNOT00000064860	Dhx9 Links NCBI RGD Ensembl Show fit	DExH-box helicase 9
chr10_-_14788617 Show fit	2.32	ENSRNOT00000043626	Cacna1h Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 H
chr8_-_96132634 Show fit	2.24	ENSRNOT00000041655	Syncrip Links NCBI RGD Ensembl Show fit	synaptotagmin binding, cytoplasmic RNA interacting protein
chrX_+_156863754 Show fit	2.20	ENSRNOT00000083611	Naa10 Links NCBI RGD Ensembl Show fit	N(alpha)-acetyltransferase 10, NatA catalytic subunit
chr6_+_108820774 Show fit	2.15	ENSRNOT00000089683 ENSRNOT00000080038 ENSRNOT00000006492	Ylpm1 Links NCBI RGD Ensembl Show fit	YLP motif containing 1
chr1_-_134867001 Show fit	2.14	ENSRNOT00000090149	Chd2 Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 2
chr20_+_48335540 Show fit	2.12	ENSRNOT00000000352	Cd24 Links NCBI RGD Ensembl Show fit	CD24 molecule
chr11_-_80650802 Show fit	2.07	ENSRNOT00000043660	Rtp4 Links NCBI RGD Ensembl Show fit	receptor (chemosensory) transporter protein 4
chr11_-_31213787 Show fit	2.01	ENSRNOT00000002800	Paxbp1 Links NCBI RGD Ensembl Show fit	PAX3 and PAX7 binding protein 1
chr7_+_37812831 Show fit	2.00	ENSRNOT00000005910	Btg1 Links NCBI RGD Ensembl Show fit	BTG anti-proliferation factor 1
chr8_+_97537968 Show fit	1.97	ENSRNOT00000037276	Adamts7 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase with thrombospondin type 1 motif, 7
chr8_+_59457018 Show fit	1.97	ENSRNOT00000017900	Ireb2 Links NCBI RGD Ensembl Show fit	iron responsive element binding protein 2
chr8_-_132919110 Show fit	1.95	ENSRNOT00000008747	Xcr1 Links NCBI RGD Ensembl Show fit	X-C motif chemokine receptor 1
chr14_-_44845218 Show fit	1.91	ENSRNOT00000004003	Klhl5 Links NCBI RGD Ensembl Show fit	kelch-like family member 5
chr7_-_140546908 Show fit	1.90	ENSRNOT00000077502	Kmt2d Links NCBI RGD Ensembl Show fit	lysine methyltransferase 2D
chr19_-_55490426 Show fit	1.90	ENSRNOT00000081800	Cbfa2t3 Links NCBI RGD Ensembl Show fit	CBFA2/RUNX1 translocation partner 3
chr6_+_137953545 Show fit	1.89	ENSRNOT00000006804	Crip2 Links NCBI RGD Ensembl Show fit	cysteine-rich protein 2
chr12_-_11808977 Show fit	1.87	ENSRNOT00000071795	AABR07035375.1 Links NCBI RGD Ensembl Show fit
chr16_+_2670618 Show fit	1.81	ENSRNOT00000030102	Il17rd Links NCBI RGD Ensembl Show fit	interleukin 17 receptor D
chr15_+_86243148 Show fit	1.80	ENSRNOT00000084471 ENSRNOT00000090727	Lmo7 Links NCBI RGD Ensembl Show fit	LIM domain 7
chr1_+_65564173 Show fit	1.78	ENSRNOT00000038860	Zbtb45 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 45
chr10_+_82937971 Show fit	1.76	ENSRNOT00000005797	Dlx3 Links NCBI RGD Ensembl Show fit	distal-less homeobox 3
chr1_-_221087449 Show fit	1.76	ENSRNOT00000016987	Fam89b Links NCBI RGD Ensembl Show fit	family with sequence similarity 89, member B
chrX_-_128268285 Show fit	1.76	ENSRNOT00000009755 ENSRNOT00000081880	Thoc2 Links NCBI RGD Ensembl Show fit	THO complex 2
chr10_-_39405311 Show fit	1.75	ENSRNOT00000074616	Pdlim4 Links NCBI RGD Ensembl Show fit	PDZ and LIM domain 4
chr2_-_142686577 Show fit	1.74	ENSRNOT00000014562	Nhlrc3 Links NCBI RGD Ensembl Show fit	NHL repeat containing 3
chr4_+_66091641 Show fit	1.74	ENSRNOT00000043147	AABR07060287.1 Links NCBI RGD Ensembl Show fit
chr2_+_119112513 Show fit	1.73	ENSRNOT00000015460	Actl6a Links NCBI RGD Ensembl Show fit	actin-like 6A
chr13_+_52976507 Show fit	1.69	ENSRNOT00000090599 ENSRNOT00000011324	Kif21b Links NCBI RGD Ensembl Show fit	kinesin family member 21B
chr1_-_263431290 Show fit	1.68	ENSRNOT00000022633	Slc25a28 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 28
chr2_-_226779440 Show fit	1.66	ENSRNOT00000055669	Fnbp1l Links NCBI RGD Ensembl Show fit	formin binding protein 1-like
chr5_+_173256834 Show fit	1.66	ENSRNOT00000089936	Ccnl2 Links NCBI RGD Ensembl Show fit	cyclin L2
chr3_+_80634470 Show fit	1.65	ENSRNOT00000045644	Ambra1 Links NCBI RGD Ensembl Show fit	autophagy and beclin 1 regulator 1
chr16_+_75366929 Show fit	1.59	ENSRNOT00000049394	Defal1 Links NCBI RGD Ensembl Show fit	defensin alpha-like 1
chr2_+_238257031 Show fit	1.57	ENSRNOT00000016066	Ints12 Links NCBI RGD Ensembl Show fit	integrator complex subunit 12
chr3_+_171037957 Show fit	1.56	ENSRNOT00000008764	Rbm38 Links NCBI RGD Ensembl Show fit	RNA binding motif protein 38
chr17_-_20364714 Show fit	1.55	ENSRNOT00000070962	Jarid2 Links NCBI RGD Ensembl Show fit	jumonji and AT-rich interaction domain containing 2
chr10_-_74413745 Show fit	1.55	ENSRNOT00000038296	Prr11 Links NCBI RGD Ensembl Show fit	proline rich 11
chr5_+_116421894 Show fit	1.55	ENSRNOT00000080577 ENSRNOT00000086628 ENSRNOT00000004017	Nfia Links NCBI RGD Ensembl Show fit	nuclear factor I/A
chr3_+_3767394 Show fit	1.52	ENSRNOT00000067840	Gpsm1 Links NCBI RGD Ensembl Show fit	G-protein signaling modulator 1
chr12_+_25264192 Show fit	1.51	ENSRNOT00000079392	Gtf2ird1 Links NCBI RGD Ensembl Show fit	GTF2I repeat domain containing 1
chr15_-_82482009 Show fit	1.49	ENSRNOT00000011926	Dach1 Links NCBI RGD Ensembl Show fit	dachshund family transcription factor 1
chr1_-_89007041 Show fit	1.48	ENSRNOT00000032363	Proser3 Links NCBI RGD Ensembl Show fit	proline and serine rich 3
chr8_+_70630767 Show fit	1.39	ENSRNOT00000051353	Igdcc3 Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily, DCC subclass, member 3
chr11_-_78456501 Show fit	1.37	ENSRNOT00000036193	Tp63 Links NCBI RGD Ensembl Show fit	tumor protein p63
chrX_-_104984341 Show fit	1.35	ENSRNOT00000077996	Xkrx Links NCBI RGD Ensembl Show fit	XK related, X-linked
chr4_+_113968995 Show fit	1.35	ENSRNOT00000079511	Rtkn Links NCBI RGD Ensembl Show fit	rhotekin
chr3_+_150188455 Show fit	1.34	ENSRNOT00000072917	AABR07054370.1 Links NCBI RGD Ensembl Show fit
chr5_+_128083118 Show fit	1.34	ENSRNOT00000079161	Zcchc11 Links NCBI RGD Ensembl Show fit	zinc finger CCHC-type containing 11
chr14_-_51462721 Show fit	1.33	ENSRNOT00000015044	Hmgb3 Links NCBI RGD Ensembl Show fit	high mobility group box 3
chr11_+_67465236 Show fit	1.32	ENSRNOT00000042374	Stfa2 Links NCBI RGD Ensembl Show fit	stefin A2
chr1_-_198316882 Show fit	1.30	ENSRNOT00000085304 ENSRNOT00000064985	Taok2 Links NCBI RGD Ensembl Show fit	TAO kinase 2
chr15_+_105851542 Show fit	1.30	ENSRNOT00000086959	Rap2a Links NCBI RGD Ensembl Show fit	RAS related protein 2a
chr2_-_226779266 Show fit	1.28	ENSRNOT00000019244	Fnbp1l Links NCBI RGD Ensembl Show fit	formin binding protein 1-like
chr17_-_17947777 Show fit	1.27	ENSRNOT00000036876	Rnf144b Links NCBI RGD Ensembl Show fit	ring finger protein 144B
chr6_+_10642700 Show fit	1.26	ENSRNOT00000040329	LOC100359600 Links NCBI RGD Ensembl Show fit	karyopherin alpha 2-like
chr18_+_30909490 Show fit	1.24	ENSRNOT00000026967	Pcdhgb8 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 8
chr19_-_41010122 Show fit	1.23	ENSRNOT00000088770	Vac14 Links NCBI RGD Ensembl Show fit	Vac14, PIKFYVE complex component
chr6_+_80159364 Show fit	1.22	ENSRNOT00000005439	Pnn Links NCBI RGD Ensembl Show fit	pinin, desmosome associated protein
chr1_+_221043119 Show fit	1.22	ENSRNOT00000028185	Map3k11 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase 11
chr3_+_116899878 Show fit	1.21	ENSRNOT00000090802 ENSRNOT00000066101	Sema6d Links NCBI RGD Ensembl Show fit	semaphorin 6D
chr20_+_34894419 Show fit	1.21	ENSRNOT00000000471	Asf1a Links NCBI RGD Ensembl Show fit	anti-silencing function 1A histone chaperone
chr7_+_123260607 Show fit	1.19	ENSRNOT00000066849	Xrcc6 Links NCBI RGD Ensembl Show fit	X-ray repair cross complementing 6
chr7_-_98098268 Show fit	1.17	ENSRNOT00000010361	Fbxo32 Links NCBI RGD Ensembl Show fit	F-box protein 32
chr9_-_81772851 Show fit	1.17	ENSRNOT00000032719	Usp37 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 37
chr2_-_139528162 Show fit	1.16	ENSRNOT00000014317	Slc7a11 Links NCBI RGD Ensembl Show fit	solute carrier family 7 member 11
chr13_-_73055631 Show fit	1.15	ENSRNOT00000081892	Xpr1 Links NCBI RGD Ensembl Show fit	xenotropic and polytropic retrovirus receptor 1
chr12_-_52596076 Show fit	1.15	ENSRNOT00000056639	Chfr Links NCBI RGD Ensembl Show fit	checkpoint with forkhead and ring finger domains
chr1_+_128614138 Show fit	1.13	ENSRNOT00000076227 ENSRNOT00000078707	Ttc23 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 23
chr5_-_75676584 Show fit	1.13	ENSRNOT00000044348	Lpar1 Links NCBI RGD Ensembl Show fit	lysophosphatidic acid receptor 1
chr9_+_40817654 Show fit	1.12	ENSRNOT00000037392	AABR07067339.1 Links NCBI RGD Ensembl Show fit
chr9_+_66952720 Show fit	1.12	ENSRNOT00000023678	Nbeal1 Links NCBI RGD Ensembl Show fit	neurobeachin-like 1
chr2_-_33025271 Show fit	1.11	ENSRNOT00000074941	NEWGENE_1310139 Links NCBI RGD Ensembl Show fit	microtubule associated serine/threonine kinase family member 4
chr6_-_72596446 Show fit	1.11	ENSRNOT00000008459	Hectd1 Links NCBI RGD Ensembl Show fit	HECT domain E3 ubiquitin protein ligase 1
chrX_-_25628272 Show fit	1.10	ENSRNOT00000086414	Mid1 Links NCBI RGD Ensembl Show fit	midline 1
chr12_+_25264400 Show fit	1.07	ENSRNOT00000087656	Gtf2ird1 Links NCBI RGD Ensembl Show fit	GTF2I repeat domain containing 1
chr4_+_114835064 Show fit	1.04	ENSRNOT00000031964	LOC103692165 Links NCBI RGD Ensembl Show fit	rhotekin
chr13_-_1946508 Show fit	1.03	ENSRNOT00000043890	Dsel Links NCBI RGD Ensembl Show fit	dermatan sulfate epimerase-like
chr12_+_47992091 Show fit	1.02	ENSRNOT00000073019	Kctd10 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 10
chr11_-_78456200 Show fit	1.00	ENSRNOT00000067251 ENSRNOT00000036179	Tp63 Links NCBI RGD Ensembl Show fit	tumor protein p63
chr9_+_94562839 Show fit	0.99	ENSRNOT00000022308	RGD1311447 Links NCBI RGD Ensembl Show fit	LOC363276
chr13_-_79801112 Show fit	0.97	ENSRNOT00000087323 ENSRNOT00000036483	Suco Links NCBI RGD Ensembl Show fit	SUN domain containing ossification factor
chr15_+_41927241 Show fit	0.96	ENSRNOT00000012035	Trim13 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 13
chr13_-_79744939 Show fit	0.96	ENSRNOT00000076706	Suco Links NCBI RGD Ensembl Show fit	SUN domain containing ossification factor
chr13_+_89797800 Show fit	0.90	ENSRNOT00000005811	Usf1 Links NCBI RGD Ensembl Show fit	upstream transcription factor 1
chr16_+_20027348 Show fit	0.85	ENSRNOT00000034589	Fam129c Links NCBI RGD Ensembl Show fit	family with sequence similarity 129, member C
chr6_-_22281886 Show fit	0.82	ENSRNOT00000039375	Spast Links NCBI RGD Ensembl Show fit	spastin
chr10_-_87529599 Show fit	0.81	ENSRNOT00000074099	Krtap2-1 Links NCBI RGD Ensembl Show fit	keratin associated protein 2-1
chr13_+_99473044 Show fit	0.79	ENSRNOT00000004939	Cnih4 Links NCBI RGD Ensembl Show fit	cornichon family AMPA receptor auxiliary protein 4
chr2_-_52282548 Show fit	0.79	ENSRNOT00000033627	Nnt Links NCBI RGD Ensembl Show fit	nicotinamide nucleotide transhydrogenase
chr3_-_2719135 Show fit	0.77	ENSRNOT00000080257	Lcn12 Links NCBI RGD Ensembl Show fit	lipocalin 12
chr1_+_91433030 Show fit	0.76	ENSRNOT00000015205	Slc7a10 Links NCBI RGD Ensembl Show fit	solute carrier family 7 member 10
chr20_-_3822754 Show fit	0.75	ENSRNOT00000000541 ENSRNOT00000077357	Slc39a7 Links NCBI RGD Ensembl Show fit	solute carrier family 39 member 7
chr5_+_126976456 Show fit	0.73	ENSRNOT00000014275	Ndc1 Links NCBI RGD Ensembl Show fit	NDC1 transmembrane nucleoporin
chr4_-_77489535 Show fit	0.72	ENSRNOT00000008728	Pdia4 Links NCBI RGD Ensembl Show fit	protein disulfide isomerase family A, member 4
chr3_-_2719513 Show fit	0.71	ENSRNOT00000020997	Lcn12 Links NCBI RGD Ensembl Show fit	lipocalin 12
chr2_-_186245771 Show fit	0.67	ENSRNOT00000066004 ENSRNOT00000079954	Dclk2 Links NCBI RGD Ensembl Show fit	doublecortin-like kinase 2
chr6_-_22281724 Show fit	0.65	ENSRNOT00000079137	Spast Links NCBI RGD Ensembl Show fit	spastin

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
4.3	17.1	GO:0030538	embryonic genitalia morphogenesis(GO:0030538)
3.9	11.8	GO:0009609	response to symbiotic bacterium(GO:0009609)
3.6	21.5	GO:0072564	blood microparticle formation(GO:0072564) regulation of blood microparticle formation(GO:2000332) positive regulation of blood microparticle formation(GO:2000334)
2.6	7.7	GO:0021698	cerebellar cortex structural organization(GO:0021698)
2.3	4.6	GO:0009608	response to symbiont(GO:0009608)
1.9	5.8	GO:1902659	regulation of glucose mediated signaling pathway(GO:1902659)
1.6	8.0	GO:0050828	regulation of liquid surface tension(GO:0050828)
1.5	9.0	GO:0051365	cellular response to potassium ion starvation(GO:0051365)
1.3	5.2	GO:0014826	vein smooth muscle contraction(GO:0014826)
1.3	3.9	GO:0030237	female sex determination(GO:0030237)
1.2	3.6	GO:0003192	mitral valve formation(GO:0003192) condensed mesenchymal cell proliferation(GO:0072137)
1.1	5.6	GO:1990823	response to leukemia inhibitory factor(GO:1990823) cellular response to leukemia inhibitory factor(GO:1990830)
1.0	2.9	GO:0032290	peripheral nervous system myelin formation(GO:0032290)
0.9	2.8	GO:0046833	positive regulation of RNA export from nucleus(GO:0046833)
0.9	3.7	GO:0090625	mRNA cleavage involved in gene silencing by siRNA(GO:0090625)
0.9	5.3	GO:0035983	skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration(GO:0014834) response to trichostatin A(GO:0035983) cellular response to trichostatin A(GO:0035984)
0.8	2.5	GO:0090271	positive regulation of fibroblast growth factor production(GO:0090271)
0.8	4.9	GO:0000320	re-entry into mitotic cell cycle(GO:0000320)
0.8	11.1	GO:0061179	negative regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061179)
0.7	2.2	GO:0017198	N-terminal peptidyl-serine acetylation(GO:0017198) N-terminal peptidyl-glutamic acid acetylation(GO:0018002) peptidyl-serine acetylation(GO:0030920)
0.7	5.0	GO:1904117	cellular response to vasopressin(GO:1904117)
0.7	2.1	GO:0002424	T cell mediated immune response to tumor cell(GO:0002424) regulation of T cell mediated immune response to tumor cell(GO:0002840)
0.7	4.8	GO:0051799	negative regulation of hair follicle development(GO:0051799)
0.7	3.9	GO:0060023	soft palate development(GO:0060023)
0.6	2.4	GO:0007499	ectoderm and mesoderm interaction(GO:0007499)
0.6	1.8	GO:0071895	odontoblast differentiation(GO:0071895)
0.6	1.8	GO:0060392	negative regulation of SMAD protein import into nucleus(GO:0060392)
0.6	4.6	GO:0070934	CRD-mediated mRNA stabilization(GO:0070934)
0.6	3.9	GO:0072257	metanephric nephron tubule epithelial cell differentiation(GO:0072257) regulation of metanephric nephron tubule epithelial cell differentiation(GO:0072307)
0.5	8.2	GO:0051639	actin filament network formation(GO:0051639)
0.5	7.4	GO:0034501	protein localization to kinetochore(GO:0034501)
0.5	1.9	GO:0001555	oocyte growth(GO:0001555)
0.5	2.8	GO:0010936	negative regulation of macrophage cytokine production(GO:0010936)
0.4	5.2	GO:0042159	lipoprotein catabolic process(GO:0042159)
0.4	2.6	GO:0089700	protein kinase D signaling(GO:0089700)
0.4	2.9	GO:0030050	vesicle transport along actin filament(GO:0030050)
0.4	3.8	GO:0030948	negative regulation of vascular endothelial growth factor receptor signaling pathway(GO:0030948)
0.4	6.1	GO:0017121	phospholipid scrambling(GO:0017121)
0.4	2.6	GO:0014886	transition between slow and fast fiber(GO:0014886)
0.4	8.1	GO:0061436	establishment of skin barrier(GO:0061436)
0.4	6.1	GO:0042953	lipoprotein transport(GO:0042953) lipoprotein localization(GO:0044872)
0.3	12.2	GO:0001958	endochondral ossification(GO:0001958) replacement ossification(GO:0036075)
0.3	16.6	GO:0006509	membrane protein ectodomain proteolysis(GO:0006509)
0.3	1.3	GO:0045578	negative regulation of B cell differentiation(GO:0045578)
0.3	2.3	GO:0034650	aldosterone biosynthetic process(GO:0032342) cortisol metabolic process(GO:0034650) cortisol biosynthetic process(GO:0034651)
0.3	3.6	GO:0051382	kinetochore assembly(GO:0051382)
0.3	2.8	GO:0007171	activation of transmembrane receptor protein tyrosine kinase activity(GO:0007171)
0.3	3.3	GO:0030206	chondroitin sulfate biosynthetic process(GO:0030206)
0.3	0.9	GO:0000432	regulation of transcription from RNA polymerase II promoter by glucose(GO:0000430) positive regulation of transcription from RNA polymerase II promoter by glucose(GO:0000432) late viral transcription(GO:0019086)
0.3	12.2	GO:0007202	activation of phospholipase C activity(GO:0007202)
0.3	1.2	GO:0097680	double-strand break repair via classical nonhomologous end joining(GO:0097680)
0.3	7.0	GO:0048339	hippo signaling(GO:0035329) paraxial mesoderm development(GO:0048339)
0.3	5.2	GO:0021527	spinal cord association neuron differentiation(GO:0021527)
0.3	2.0	GO:2000288	positive regulation of myoblast proliferation(GO:2000288)
0.3	2.0	GO:2000271	positive regulation of fibroblast apoptotic process(GO:2000271)
0.3	1.1	GO:0060708	spongiotrophoblast differentiation(GO:0060708)
0.3	1.9	GO:1903715	regulation of aerobic respiration(GO:1903715)
0.3	3.2	GO:0006337	nucleosome disassembly(GO:0006337)
0.3	2.6	GO:0043305	negative regulation of mast cell degranulation(GO:0043305)
0.3	1.0	GO:0030205	dermatan sulfate metabolic process(GO:0030205)
0.3	0.5	GO:0060988	lipid tube assembly(GO:0060988)
0.2	1.5	GO:0060244	negative regulation of cell proliferation involved in contact inhibition(GO:0060244)
0.2	1.5	GO:0031117	positive regulation of microtubule depolymerization(GO:0031117)
0.2	4.5	GO:0060736	prostate gland growth(GO:0060736)
0.2	1.2	GO:0014878	response to electrical stimulus involved in regulation of muscle adaptation(GO:0014878)
0.2	1.3	GO:0010587	miRNA catabolic process(GO:0010587)
0.2	2.6	GO:1900363	regulation of mRNA polyadenylation(GO:1900363)
0.2	9.5	GO:0070207	protein homotrimerization(GO:0070207)
0.2	10.8	GO:0043029	T cell homeostasis(GO:0043029)
0.2	6.6	GO:0070232	regulation of T cell apoptotic process(GO:0070232)
0.2	6.8	GO:0046627	negative regulation of insulin receptor signaling pathway(GO:0046627)
0.2	0.7	GO:1903334	positive regulation of protein folding(GO:1903334)
0.2	2.0	GO:0006782	protoporphyrinogen IX biosynthetic process(GO:0006782)
0.2	1.8	GO:1904424	regulation of GTP binding(GO:1904424)
0.2	0.5	GO:0016598	protein arginylation(GO:0016598)
0.2	1.7	GO:1901409	positive regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901409)
0.2	1.8	GO:0010793	regulation of mRNA export from nucleus(GO:0010793)
0.2	0.6	GO:0001180	transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript(GO:0001180)
0.2	0.5	GO:0042489	negative regulation of odontogenesis of dentin-containing tooth(GO:0042489)
0.2	0.6	GO:0043397	corticotropin-releasing hormone secretion(GO:0043396) regulation of corticotropin-releasing hormone secretion(GO:0043397)
0.2	0.3	GO:0015679	plasma membrane copper ion transport(GO:0015679)
0.1	0.6	GO:0046726	positive regulation by virus of viral protein levels in host cell(GO:0046726)
0.1	6.7	GO:1901998	toxin transport(GO:1901998)
0.1	1.5	GO:0072189	ureter development(GO:0072189)
0.1	1.1	GO:0035372	protein localization to microtubule(GO:0035372)
0.1	1.2	GO:0072502	cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.1	2.1	GO:0060218	hematopoietic stem cell differentiation(GO:0060218)
0.1	1.6	GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest(GO:0006977)
0.1	1.6	GO:0051574	positive regulation of histone H3-K9 methylation(GO:0051574)
0.1	1.3	GO:0045198	establishment of epithelial cell apical/basal polarity(GO:0045198)
0.1	5.9	GO:0043392	negative regulation of DNA binding(GO:0043392)
0.1	0.8	GO:0042940	D-amino acid transport(GO:0042940)
0.1	1.2	GO:0035871	protein K11-linked deubiquitination(GO:0035871)
0.1	3.5	GO:0030866	cortical actin cytoskeleton organization(GO:0030866)
0.1	2.0	GO:0032331	negative regulation of chondrocyte differentiation(GO:0032331)
0.1	2.1	GO:0051205	protein insertion into membrane(GO:0051205)
0.1	1.2	GO:0089711	L-glutamate transmembrane transport(GO:0089711)
0.1	1.7	GO:0043968	histone H2A acetylation(GO:0043968)
0.1	1.2	GO:0007256	activation of JNKK activity(GO:0007256)
0.1	0.6	GO:0015691	cadmium ion transport(GO:0015691) cadmium ion transmembrane transport(GO:0070574)
0.1	5.4	GO:0001885	endothelial cell development(GO:0001885)
0.1	6.3	GO:0001942	hair follicle development(GO:0001942) skin epidermis development(GO:0098773)
0.1	1.9	GO:0032967	positive regulation of collagen biosynthetic process(GO:0032967)
0.1	2.4	GO:0034260	negative regulation of GTPase activity(GO:0034260)
0.1	1.7	GO:0034755	iron ion transmembrane transport(GO:0034755)
0.1	1.7	GO:0010667	negative regulation of cardiac muscle cell apoptotic process(GO:0010667)
0.1	2.9	GO:0070534	protein K63-linked ubiquitination(GO:0070534)
0.1	3.0	GO:0050873	brown fat cell differentiation(GO:0050873)
0.1	1.2	GO:0014912	negative regulation of smooth muscle cell migration(GO:0014912)
0.1	1.6	GO:0016180	snRNA processing(GO:0016180)
0.1	2.3	GO:0045600	positive regulation of fat cell differentiation(GO:0045600)
0.1	1.0	GO:0032897	negative regulation of viral transcription(GO:0032897)
0.1	0.7	GO:0051292	nuclear pore complex assembly(GO:0051292)
0.1	2.7	GO:0021762	substantia nigra development(GO:0021762)
0.0	4.2	GO:0001837	epithelial to mesenchymal transition(GO:0001837)
0.0	1.2	GO:0006335	DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.0	1.5	GO:0031648	protein destabilization(GO:0031648)
0.0	1.0	GO:0045746	negative regulation of Notch signaling pathway(GO:0045746)
0.0	3.7	GO:0048706	embryonic skeletal system development(GO:0048706)
0.0	1.3	GO:0000186	activation of MAPKK activity(GO:0000186)
0.0	2.2	GO:0032204	regulation of telomere maintenance(GO:0032204)
0.0	0.8	GO:0071577	zinc II ion transmembrane transport(GO:0071577)
0.0	1.9	GO:0070098	chemokine-mediated signaling pathway(GO:0070098)
0.0	2.0	GO:0032024	positive regulation of insulin secretion(GO:0032024)
0.0	1.3	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436)
0.0	0.8	GO:0006739	NADP metabolic process(GO:0006739)
0.0	1.5	GO:0008277	regulation of G-protein coupled receptor protein signaling pathway(GO:0008277)
0.0	0.1	GO:0017196	N-terminal peptidyl-methionine acetylation(GO:0017196)
0.0	1.5	GO:0007050	cell cycle arrest(GO:0007050)
0.0	0.5	GO:0097502	mannosylation(GO:0097502)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.3	7.0	GO:0071149	TEAD-2-YAP complex(GO:0071149)
1.8	9.1	GO:0044530	supraspliceosomal complex(GO:0044530)
1.2	9.5	GO:0042105	alpha-beta T cell receptor complex(GO:0042105)
1.0	5.8	GO:0005726	perichromatin fibrils(GO:0005726)
0.6	17.1	GO:0005719	nuclear euchromatin(GO:0005719)
0.6	4.6	GO:0070937	CRD-mediated mRNA stability complex(GO:0070937)
0.6	8.0	GO:0097208	alveolar lamellar body(GO:0097208)
0.5	3.7	GO:0035068	micro-ribonucleoprotein complex(GO:0035068)
0.5	5.0	GO:0071564	npBAF complex(GO:0071564)
0.4	7.1	GO:0031528	microvillus membrane(GO:0031528)
0.4	6.8	GO:0035098	ESC/E(Z) complex(GO:0035098)
0.3	8.1	GO:0016327	apicolateral plasma membrane(GO:0016327)
0.3	2.2	GO:0031415	NatA complex(GO:0031415)
0.3	6.8	GO:0019013	viral nucleocapsid(GO:0019013)
0.3	27.6	GO:0031526	brush border membrane(GO:0031526)
0.3	1.2	GO:0043564	Ku70:Ku80 complex(GO:0043564)
0.3	4.6	GO:0042613	MHC class II protein complex(GO:0042613)
0.2	7.7	GO:0051233	spindle midzone(GO:0051233)
0.2	0.6	GO:0005668	RNA polymerase transcription factor SL1 complex(GO:0005668)
0.2	2.4	GO:0044294	dendritic growth cone(GO:0044294)
0.2	14.3	GO:0005581	collagen trimer(GO:0005581)
0.2	1.8	GO:0000445	THO complex(GO:0000347) THO complex part of transcription export complex(GO:0000445)
0.2	1.9	GO:0044666	MLL3/4 complex(GO:0044666)
0.1	6.5	GO:0000307	cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1	0.9	GO:0016589	NURF complex(GO:0016589)
0.1	0.8	GO:0035032	phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.1	0.5	GO:0031501	mannosyltransferase complex(GO:0031501)
0.1	1.6	GO:0032039	integrator complex(GO:0032039)
0.1	1.9	GO:0030867	rough endoplasmic reticulum membrane(GO:0030867)
0.1	6.8	GO:0071013	catalytic step 2 spliceosome(GO:0071013)
0.1	0.7	GO:0034663	endoplasmic reticulum chaperone complex(GO:0034663)
0.1	1.0	GO:0036038	MKS complex(GO:0036038)
0.1	1.5	GO:0071782	endoplasmic reticulum tubular network(GO:0071782)
0.1	0.4	GO:0030877	beta-catenin destruction complex(GO:0030877)
0.1	2.3	GO:0005891	voltage-gated calcium channel complex(GO:0005891)
0.1	1.0	GO:0097038	perinuclear endoplasmic reticulum(GO:0097038)
0.1	0.5	GO:0097550	transcriptional preinitiation complex(GO:0097550)
0.1	8.2	GO:0055037	recycling endosome(GO:0055037)
0.0	3.5	GO:0005791	rough endoplasmic reticulum(GO:0005791)
0.0	3.7	GO:0005604	basement membrane(GO:0005604)
0.0	1.7	GO:0045335	phagocytic vesicle(GO:0045335)
0.0	0.2	GO:0016602	CCAAT-binding factor complex(GO:0016602)
0.0	7.0	GO:0005578	proteinaceous extracellular matrix(GO:0005578)
0.0	1.7	GO:0005871	kinesin complex(GO:0005871)
0.0	0.8	GO:0097440	apical dendrite(GO:0097440)
0.0	0.2	GO:1990316	ATG1/ULK1 kinase complex(GO:1990316)
0.0	0.1	GO:0031417	NatC complex(GO:0031417)
0.0	17.4	GO:0016604	nuclear body(GO:0016604)
0.0	0.3	GO:0002199	zona pellucida receptor complex(GO:0002199)
0.0	14.1	GO:0031966	mitochondrial membrane(GO:0031966)
0.0	3.2	GO:0005667	transcription factor complex(GO:0005667)
0.0	6.5	GO:0009897	external side of plasma membrane(GO:0009897)
0.0	1.1	GO:0043198	dendritic shaft(GO:0043198)
0.0	0.8	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0	4.6	GO:0031965	nuclear membrane(GO:0031965)
0.0	3.5	GO:0009898	cytoplasmic side of plasma membrane(GO:0009898)
0.0	0.3	GO:0046658	anchored component of plasma membrane(GO:0046658)
0.0	7.7	GO:0005789	endoplasmic reticulum membrane(GO:0005789)
0.0	0.9	GO:0031463	Cul3-RING ubiquitin ligase complex(GO:0031463)
0.0	1.9	GO:0031012	extracellular matrix(GO:0031012)
0.0	3.4	GO:0005925	focal adhesion(GO:0005925)
0.0	18.8	GO:0005654	nucleoplasm(GO:0005654)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
4.3	21.5	GO:0070892	lipoteichoic acid receptor activity(GO:0070892)
3.0	9.0	GO:0004507	steroid 11-beta-monooxygenase activity(GO:0004507) corticosterone 18-monooxygenase activity(GO:0047783)
1.7	5.2	GO:0031708	endothelin B receptor binding(GO:0031708)
1.4	10.1	GO:0004111	creatine kinase activity(GO:0004111)
1.1	3.3	GO:0030158	protein xylosyltransferase activity(GO:0030158)
1.0	3.1	GO:0001588	dopamine neurotransmitter receptor activity, coupled via Gs(GO:0001588)
1.0	6.1	GO:0042954	lipoprotein transporter activity(GO:0042954)
0.8	5.0	GO:0008294	calcium- and calmodulin-responsive adenylate cyclase activity(GO:0008294)
0.8	6.4	GO:0001164	RNA polymerase I regulatory region sequence-specific DNA binding(GO:0001163) RNA polymerase I CORE element sequence-specific DNA binding(GO:0001164)
0.7	2.2	GO:1990190	peptide-glutamate-N-acetyltransferase activity(GO:1990190)
0.6	2.6	GO:0035614	snRNA stem-loop binding(GO:0035614)
0.5	5.3	GO:0070878	primary miRNA binding(GO:0070878)
0.5	11.8	GO:0004602	glutathione peroxidase activity(GO:0004602)
0.5	2.0	GO:0030350	iron-responsive element binding(GO:0030350)
0.5	7.7	GO:0008574	ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.5	2.3	GO:0008332	low voltage-gated calcium channel activity(GO:0008332)
0.4	1.3	GO:0050265	RNA uridylyltransferase activity(GO:0050265)
0.4	2.1	GO:0031849	olfactory receptor binding(GO:0031849)
0.4	1.2	GO:0005294	neutral L-amino acid secondary active transmembrane transporter activity(GO:0005294)
0.4	7.0	GO:0001134	transcription factor activity, transcription factor recruiting(GO:0001134)
0.4	5.0	GO:0008143	poly(A) binding(GO:0008143)
0.4	4.6	GO:1990405	protein antigen binding(GO:1990405)
0.3	1.0	GO:0047757	chondroitin-glucuronate 5-epimerase activity(GO:0047757)
0.3	1.2	GO:0004706	JUN kinase kinase kinase activity(GO:0004706)
0.3	2.4	GO:0005095	GTPase inhibitor activity(GO:0005095)
0.3	1.2	GO:0000822	inositol hexakisphosphate binding(GO:0000822)
0.3	1.1	GO:0035727	lysophosphatidic acid binding(GO:0035727) lysophosphatidic acid receptor activity(GO:0070915)
0.3	2.8	GO:0005412	glucose:sodium symporter activity(GO:0005412)
0.3	6.1	GO:0017128	phospholipid scramblase activity(GO:0017128)
0.3	8.2	GO:0003785	actin monomer binding(GO:0003785)
0.3	2.4	GO:0005113	patched binding(GO:0005113)
0.3	10.9	GO:0005109	frizzled binding(GO:0005109)
0.2	10.8	GO:0042169	SH2 domain binding(GO:0042169)
0.2	3.7	GO:0035198	miRNA binding(GO:0035198)
0.2	1.8	GO:0030368	interleukin-17 receptor activity(GO:0030368)
0.2	11.1	GO:0008188	neuropeptide receptor activity(GO:0008188)
0.2	6.5	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.2	0.6	GO:0102345	3-hydroxy-behenoyl-CoA dehydratase activity(GO:0102344) 3-hydroxy-lignoceroyl-CoA dehydratase activity(GO:0102345)
0.2	1.7	GO:0015093	ferrous iron transmembrane transporter activity(GO:0015093)
0.2	1.5	GO:0001075	transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly(GO:0001075)
0.2	1.2	GO:0051575	5'-deoxyribose-5-phosphate lyase activity(GO:0051575)
0.2	2.1	GO:0030296	protein tyrosine kinase activator activity(GO:0030296)
0.2	5.0	GO:0031492	nucleosomal DNA binding(GO:0031492)
0.1	2.4	GO:0097371	MDM2/MDM4 family protein binding(GO:0097371)
0.1	28.2	GO:0001047	core promoter binding(GO:0001047)
0.1	2.6	GO:0004697	protein kinase C activity(GO:0004697)
0.1	0.8	GO:0031730	CCR5 chemokine receptor binding(GO:0031730)
0.1	8.7	GO:1990782	protein tyrosine kinase binding(GO:1990782)
0.1	14.8	GO:0004222	metalloendopeptidase activity(GO:0004222)
0.1	2.8	GO:0005161	platelet-derived growth factor receptor binding(GO:0005161)
0.1	18.6	GO:0008201	heparin binding(GO:0008201)
0.1	1.5	GO:0005092	GDP-dissociation inhibitor activity(GO:0005092)
0.1	2.7	GO:0071889	14-3-3 protein binding(GO:0071889)
0.1	4.3	GO:0017080	sodium channel regulator activity(GO:0017080)
0.1	1.2	GO:0030215	semaphorin receptor binding(GO:0030215)
0.1	3.0	GO:0033613	activating transcription factor binding(GO:0033613)
0.1	1.5	GO:0008568	microtubule-severing ATPase activity(GO:0008568)
0.1	1.5	GO:0001972	retinoic acid binding(GO:0001972)
0.1	1.3	GO:0000400	four-way junction DNA binding(GO:0000400)
0.1	1.9	GO:0004950	chemokine receptor activity(GO:0004950)
0.1	1.3	GO:0031434	mitogen-activated protein kinase kinase binding(GO:0031434)
0.1	3.6	GO:0042805	actinin binding(GO:0042805)
0.1	0.8	GO:0022889	L-serine transmembrane transporter activity(GO:0015194) serine transmembrane transporter activity(GO:0022889)
0.1	2.8	GO:0098811	transcriptional activator activity, RNA polymerase II transcription factor binding(GO:0001190) transcriptional repressor activity, RNA polymerase II activating transcription factor binding(GO:0098811)
0.1	1.4	GO:0005385	zinc ion transmembrane transporter activity(GO:0005385)
0.1	0.9	GO:0043425	bHLH transcription factor binding(GO:0043425)
0.1	2.5	GO:0008375	acetylglucosaminyltransferase activity(GO:0008375)
0.1	1.6	GO:0032452	histone demethylase activity(GO:0032452)
0.1	0.7	GO:0015037	peptide disulfide oxidoreductase activity(GO:0015037)
0.1	2.3	GO:0001085	RNA polymerase II transcription factor binding(GO:0001085)
0.1	0.3	GO:0004322	ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.0	2.5	GO:0001158	enhancer sequence-specific DNA binding(GO:0001158)
0.0	1.0	GO:0005112	Notch binding(GO:0005112)
0.0	3.8	GO:0051219	phosphoprotein binding(GO:0051219)
0.0	2.6	GO:0004896	cytokine receptor activity(GO:0004896)
0.0	5.8	GO:0003714	transcription corepressor activity(GO:0003714)
0.0	8.0	GO:0001077	transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077)
0.0	0.7	GO:0017056	structural constituent of nuclear pore(GO:0017056)
0.0	0.1	GO:0043125	ErbB-3 class receptor binding(GO:0043125)
0.0	1.3	GO:0031624	ubiquitin conjugating enzyme binding(GO:0031624)
0.0	0.5	GO:0016755	transferase activity, transferring amino-acyl groups(GO:0016755)
0.0	0.5	GO:0005035	tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035)
0.0	1.3	GO:0004869	cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0	0.5	GO:0000030	mannosyltransferase activity(GO:0000030)
0.0	1.3	GO:0019003	GDP binding(GO:0019003)
0.0	0.6	GO:0071855	neuropeptide receptor binding(GO:0071855)
0.0	1.2	GO:0004843	thiol-dependent ubiquitin-specific protease activity(GO:0004843)
0.0	0.8	GO:0050661	NADP binding(GO:0050661)
0.0	4.2	GO:0045296	cadherin binding(GO:0045296)
0.0	0.3	GO:0044183	protein binding involved in protein folding(GO:0044183)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	4.9	PID P38 GAMMA DELTA PATHWAY	Signaling mediated by p38-gamma and p38-delta
0.4	8.5	PID HEDGEHOG 2PATHWAY	Signaling events mediated by the Hedgehog family
0.3	5.8	PID ERB GENOMIC PATHWAY	Validated nuclear estrogen receptor beta network
0.3	2.6	ST IL 13 PATHWAY	Interleukin 13 (IL-13) Pathway
0.3	14.3	PID SYNDECAN 1 PATHWAY	Syndecan-1-mediated signaling events
0.3	9.5	PID IL12 STAT4 PATHWAY	IL12 signaling mediated by STAT4
0.3	16.8	PID TAP63 PATHWAY	Validated transcriptional targets of TAp63 isoforms
0.2	5.0	PID LPA4 PATHWAY	LPA4-mediated signaling events
0.2	11.1	PID CERAMIDE PATHWAY	Ceramide signaling pathway
0.2	20.9	WNT SIGNALING	Genes related to Wnt-mediated signal transduction
0.1	5.2	PID IL6 7 PATHWAY	IL6-mediated signaling events
0.1	4.2	ST DIFFERENTIATION PATHWAY IN PC12 CELLS	Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.
0.1	5.2	PID ENDOTHELIN PATHWAY	Endothelins
0.1	3.5	PID SYNDECAN 2 PATHWAY	Syndecan-2-mediated signaling events
0.1	2.3	ST WNT BETA CATENIN PATHWAY	Wnt/beta-catenin Pathway
0.1	1.7	PID MYC PATHWAY	C-MYC pathway
0.1	15.9	NABA ECM REGULATORS	Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
0.1	10.5	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.1	1.2	PID DNA PK PATHWAY	DNA-PK pathway in nonhomologous end joining
0.1	3.2	PID REG GR PATHWAY	Glucocorticoid receptor regulatory network
0.1	2.0	PID ERBB4 PATHWAY	ErbB4 signaling events
0.1	1.2	PID IFNG PATHWAY	IFN-gamma pathway
0.1	1.3	PID P38 MKK3 6PATHWAY	p38 MAPK signaling pathway
0.1	2.0	PID HNF3A PATHWAY	FOXA1 transcription factor network
0.0	1.1	PID LYSOPHOSPHOLIPID PATHWAY	LPA receptor mediated events
0.0	0.9	PID P38 ALPHA BETA DOWNSTREAM PATHWAY	Signaling mediated by p38-alpha and p38-beta
0.0	1.4	PID MYC ACTIV PATHWAY	Validated targets of C-MYC transcriptional activation
0.0	3.8	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins
0.0	1.5	PID P53 DOWNSTREAM PATHWAY	Direct p53 effectors
0.0	0.4	PID FAK PATHWAY	Signaling events mediated by focal adhesion kinase

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.2	9.5	REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE	Genes involved in Translocation of ZAP-70 to Immunological synapse
0.5	9.0	REACTOME ENDOGENOUS STEROLS	Genes involved in Endogenous sterols
0.4	10.9	REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION	Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.3	5.0	REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY	Genes involved in Adenylate cyclase activating pathway
0.3	21.5	REACTOME ANTIGEN PROCESSING CROSS PRESENTATION	Genes involved in Antigen processing-Cross presentation
0.2	8.1	REACTOME TIGHT JUNCTION INTERACTIONS	Genes involved in Tight junction interactions
0.2	14.3	REACTOME COLLAGEN FORMATION	Genes involved in Collagen formation
0.2	6.1	REACTOME STEROID HORMONES	Genes involved in Steroid hormones
0.2	2.8	REACTOME VEGF LIGAND RECEPTOR INTERACTIONS	Genes involved in VEGF ligand-receptor interactions
0.2	4.2	REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION	Genes involved in Pre-NOTCH Transcription and Translation
0.1	2.5	REACTOME N GLYCAN ANTENNAE ELONGATION	Genes involved in N-Glycan antennae elongation
0.1	2.8	REACTOME SIGNALING BY HIPPO	Genes involved in Signaling by Hippo
0.1	1.2	REACTOME INTEGRATION OF PROVIRUS	Genes involved in Integration of provirus
0.1	14.0	REACTOME MRNA SPLICING	Genes involved in mRNA Splicing
0.1	1.2	REACTOME SYNTHESIS OF PIPS AT THE LATE ENDOSOME MEMBRANE	Genes involved in Synthesis of PIPs at the late endosome membrane
0.1	18.3	REACTOME PEPTIDE LIGAND BINDING RECEPTORS	Genes involved in Peptide ligand-binding receptors
0.1	2.3	REACTOME NCAM1 INTERACTIONS	Genes involved in NCAM1 interactions
0.1	1.7	REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI	Genes involved in Synthesis of glycosylphosphatidylinositol (GPI)
0.1	1.4	REACTOME ZINC TRANSPORTERS	Genes involved in Zinc transporters
0.1	1.9	REACTOME BASIGIN INTERACTIONS	Genes involved in Basigin interactions
0.1	6.3	REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS	Genes involved in Class B/2 (Secretin family receptors)
0.0	2.7	REACTOME INTERFERON ALPHA BETA SIGNALING	Genes involved in Interferon alpha/beta signaling
0.0	0.8	REACTOME CITRIC ACID CYCLE TCA CYCLE	Genes involved in Citric acid cycle (TCA cycle)
0.0	0.6	REACTOME RNA POL I TRANSCRIPTION TERMINATION	Genes involved in RNA Polymerase I Transcription Termination
0.0	0.3	REACTOME METAL ION SLC TRANSPORTERS	Genes involved in Metal ion SLC transporters
0.0	0.6	REACTOME NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY	Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery
0.0	1.8	REACTOME SIGNALING BY FGFR	Genes involved in Signaling by FGFR
0.0	1.1	REACTOME G ALPHA I SIGNALLING EVENTS	Genes involved in G alpha (i) signalling events
0.0	0.1	REACTOME PI3K EVENTS IN ERBB4 SIGNALING	Genes involved in PI3K events in ERBB4 signaling