ISMARA results: Zfp148

Project

GSE53960: rat RNA-Seq transcriptomic Bodymap

Navigation

Downloads

Results for Zfp148

Z-value: 1.15

Motif logo

Transcription factors associated with Zfp148

Gene Symbol	Gene ID	Gene Info
Zfp148 NCBI RGD Ensembl	ENSRNOG00000001789	zinc finger protein 148

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Zfp148	rn6_v1_chr11_-_70618347_70618347	0.46	1.7e-18	Click!

Activity profile of Zfp148 motif

Sorted Z-values of Zfp148 motif

Top targets:

Search:

Show entries

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr3_+_113257688 Show fit	38.74	ENSRNOT00000019320	Map1a NCBI RGD Ensembl Show fit	microtubule-associated protein 1A
chr2_-_29768750 Show fit	37.25	ENSRNOT00000023460	Map1b NCBI RGD Ensembl Show fit	microtubule-associated protein 1B
chr14_-_18839420 Show fit	37.16	ENSRNOT00000034090	Cxcl3 NCBI RGD Ensembl Show fit	chemokine (C-X-C motif) ligand 3
chr7_+_133400485 Show fit	36.71	ENSRNOT00000006219	Cntn1 NCBI RGD Ensembl Show fit	contactin 1
chr1_-_81881549 Show fit	32.09	ENSRNOT00000027497	Atp1a3 NCBI RGD Ensembl Show fit	ATPase Na+/K+ transporting subunit alpha 3
chr16_+_10417185 Show fit	30.56	ENSRNOT00000082186	Anxa8 NCBI RGD Ensembl Show fit	annexin A8
chr16_-_20686317 Show fit	30.52	ENSRNOT00000060097	Crlf1 NCBI RGD Ensembl Show fit	cytokine receptor-like factor 1
chr10_+_91710495 Show fit	29.64	ENSRNOT00000033276	Rprml NCBI RGD Ensembl Show fit	reprimo-like
chr16_+_3851270 Show fit	27.26	ENSRNOT00000014964	Plac9 NCBI RGD Ensembl Show fit	placenta-specific 9
chrX_+_39711201 Show fit	26.90	ENSRNOT00000080512 ENSRNOT00000009802	Cnksr2 NCBI RGD Ensembl Show fit	connector enhancer of kinase suppressor of Ras 2

Showing 1 to 10 of 200 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of Zfp148

View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
1.3	51.1	GO:0007026	negative regulation of microtubule depolymerization(GO:0007026)
1.3	48.1	GO:0090023	positive regulation of neutrophil chemotaxis(GO:0090023)
0.6	43.5	GO:0048747	muscle fiber development(GO:0048747)
0.7	36.7	GO:0010765	positive regulation of sodium ion transport(GO:0010765)
2.8	35.9	GO:0031915	positive regulation of synaptic plasticity(GO:0031915)
3.2	32.1	GO:0036376	sodium ion export from cell(GO:0036376)
5.3	31.7	GO:1900034	regulation of cellular response to heat(GO:1900034)
5.2	31.3	GO:0086048	membrane depolarization during bundle of His cell action potential(GO:0086048) positive regulation of high voltage-gated calcium channel activity(GO:1901843)
4.4	30.6	GO:0032429	regulation of phospholipase A2 activity(GO:0032429)
6.1	30.5	GO:2000672	negative regulation of motor neuron apoptotic process(GO:2000672)

Showing 1 to 10 of 115 entries

Gene overrepresentation in cellular component category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	73.1	GO:0014069	postsynaptic density(GO:0014069)
1.0	43.2	GO:0043034	costamere(GO:0043034)
0.4	38.7	GO:0001750	photoreceptor outer segment(GO:0001750)
0.4	37.3	GO:0031225	anchored component of membrane(GO:0031225)
5.3	32.1	GO:0044326	dendritic spine neck(GO:0044326)
2.6	31.3	GO:1990454	L-type voltage-gated calcium channel complex(GO:1990454)
0.4	30.6	GO:0031902	late endosome membrane(GO:0031902)
10.2	30.5	GO:0097058	CRLF-CLCF1 complex(GO:0097058)
0.0	30.2	GO:0005615	extracellular space(GO:0005615)
1.3	26.2	GO:0043196	varicosity(GO:0043196)

Showing 1 to 10 of 70 entries

Gene overrepresentation in molecular function category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	59.3	GO:0008017	microtubule binding(GO:0008017)
3.4	48.1	GO:0045236	CXCR chemokine receptor binding(GO:0045236)
1.1	43.2	GO:0030506	ankyrin binding(GO:0030506)
0.3	42.8	GO:0001948	glycoprotein binding(GO:0001948)
0.2	42.3	GO:0005096	GTPase activator activity(GO:0005096)
0.5	38.7	GO:0005518	collagen binding(GO:0005518)
1.6	37.0	GO:0043325	phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.8	34.5	GO:0017080	sodium channel regulator activity(GO:0017080)
2.3	32.1	GO:0005391	sodium:potassium-exchanging ATPase activity(GO:0005391)
10.4	31.3	GO:0086057	voltage-gated calcium channel activity involved in bundle of His cell action potential(GO:0086057)

Showing 1 to 10 of 89 entries

Gene overrepresentation in curated gene sets: canonical pathways category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	78.9	NABA SECRETED FACTORS	Genes encoding secreted soluble factors
0.4	66.9	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.8	55.7	PID NOTCH PATHWAY	Notch signaling pathway
1.2	52.7	PID NETRIN PATHWAY	Netrin-mediated signaling events
0.9	39.9	SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES	Genes related to regulation of the actin cytoskeleton
1.5	30.5	PID S1P S1P1 PATHWAY	S1P1 pathway
1.6	20.6	PID P38 GAMMA DELTA PATHWAY	Signaling mediated by p38-gamma and p38-delta
0.2	15.9	PID REG GR PATHWAY	Glucocorticoid receptor regulatory network
0.2	14.8	PID CMYB PATHWAY	C-MYB transcription factor network
0.4	13.6	PID ALPHA SYNUCLEIN PATHWAY	Alpha-synuclein signaling

Showing 1 to 10 of 28 entries

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
1.0	51.1	REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES	Genes involved in Chemokine receptors bind chemokines
0.9	45.5	REACTOME ION TRANSPORT BY P TYPE ATPASES	Genes involved in Ion transport by P-type ATPases
2.5	43.2	REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS	Genes involved in Cell-extracellular matrix interactions
2.4	36.7	REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS	Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus
0.6	24.7	REACTOME GLUCAGON TYPE LIGAND RECEPTORS	Genes involved in Glucagon-type ligand receptors
1.0	22.4	REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS	Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors)
0.7	20.6	REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS	Genes involved in Caspase-mediated cleavage of cytoskeletal proteins
1.6	19.7	REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR	Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor
1.0	17.8	REACTOME RAP1 SIGNALLING	Genes involved in Rap1 signalling
0.2	16.9	REACTOME DOWNSTREAM SIGNAL TRANSDUCTION	Genes involved in Downstream signal transduction

Showing 1 to 10 of 43 entries

Results for Zfp148

Z-value: 1.15

Motif logo

Transcription factors associated with Zfp148

Activity-expression correlation:

Activity profile of Zfp148 motif

Sorted Z-values of Zfp148 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of Zfp148

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: