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PRJEB1986: zebrafish developmental stages transcriptome

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ISMARA results PRJEB1986: zebrafish developmental stages transcriptome

ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.

All motifs sorted by activity significance

Motif name Z-value Associated genes Profile Logo
creb1a+creb1b+crema+cremb 8.02 small profile SeqLogo of creb1a+creb1b+crema+cremb
tbp 6.41 small profile SeqLogo of tbp
etv5a+etv5b_elk1_elk4_etv1_elf1_erf+erfl3_gabpa_elk3 6.17 small profile SeqLogo of etv5a+etv5b_elk1_elk4_etv1_elf1_erf+erfl3_gabpa_elk3
rest 5.40 small profile SeqLogo of rest
maza+mazb 4.71 small profile SeqLogo of maza+mazb
snai1a 4.71 small profile SeqLogo of snai1a
e2f2_e2f5 4.47 small profile SeqLogo of e2f2_e2f5
bhlhe41_tfeb_usf2_tfec_max_mnta+mntb_mitfa+mitfb_mlxipl_usf1_usf1l_mxi1_srebf1 4.18 small profile SeqLogo of bhlhe41_tfeb_usf2_tfec_max_mnta+mntb_mitfa+mitfb_mlxipl_usf1_usf1l_mxi1_srebf1
fosaa+fosab+fosl1a 3.89 small profile SeqLogo of fosaa+fosab+fosl1a
hoxb6a+hoxb6b 3.86 small profile SeqLogo of hoxb6a+hoxb6b
nrf1 3.86 small profile SeqLogo of nrf1
e2f1_e2f7 3.46 small profile SeqLogo of e2f1_e2f7
tfdp1a+tfdp1b 3.35 small profile SeqLogo of tfdp1a+tfdp1b
sox19a+sox2 3.17 small profile SeqLogo of sox19a+sox2
tgif1 3.10 small profile SeqLogo of tgif1
zbtb14 3.09 small profile SeqLogo of zbtb14
gata1b+gata2a 2.89 small profile SeqLogo of gata1b+gata2a
elf2a+elf2b 2.82 small profile SeqLogo of elf2a+elf2b
barhl1a+barhl1b 2.71 small profile SeqLogo of barhl1a+barhl1b
nr5a1a+nr5a2+nr5a5 2.70 small profile SeqLogo of nr5a1a+nr5a2+nr5a5
znf711 2.64 small profile SeqLogo of znf711
ctcf 2.60 small profile SeqLogo of ctcf
hnf4a+hnf4b 2.56 small profile SeqLogo of hnf4a+hnf4b
esrrd+esrrga_esrrb_esrra+esrrgb 2.55 small profile SeqLogo of esrrd+esrrga_esrrb_esrra+esrrgb
hnf1a 2.51 small profile SeqLogo of hnf1a
cdc5l 2.46 small profile SeqLogo of cdc5l
rreb1a+rreb1b 2.44 small profile SeqLogo of rreb1a+rreb1b
cebpb 2.40 small profile SeqLogo of cebpb
mafb+mafba+nrl 2.39 small profile SeqLogo of mafb+mafba+nrl
pbx1a+pbx1b+pbx2+pbx3a+pbx3b 2.39 small profile SeqLogo of pbx1a+pbx1b+pbx2+pbx3a+pbx3b
nr3c1_ar 2.35 small profile SeqLogo of nr3c1_ar
clocka+clockb+npas2 2.30 small profile SeqLogo of clocka+clockb+npas2
hoxa1a+hoxb1b-1+hoxc1a 2.26 small profile SeqLogo of hoxa1a+hoxb1b-1+hoxc1a
xbp1 2.21 small profile SeqLogo of xbp1
otx2b 2.20 small profile SeqLogo of otx2b
arnt2 2.17 small profile SeqLogo of arnt2
nfil3-5 2.16 small profile SeqLogo of nfil3-5
mef2aa+mef2ab 2.16 small profile SeqLogo of mef2aa+mef2ab
onecut1+onecutl 2.15 small profile SeqLogo of onecut1+onecutl
gata3 2.15 small profile SeqLogo of gata3
tfcp2+tfcp2l1+ubp1 2.14 small profile SeqLogo of tfcp2+tfcp2l1+ubp1
lef1 2.12 small profile SeqLogo of lef1
srfa+srfb 2.11 small profile SeqLogo of srfa+srfb
junba+junbb 2.10 small profile SeqLogo of junba+junbb
sp8a+sp8b_sp4_rsl1d1+sp3a_klf4 2.05 small profile SeqLogo of sp8a+sp8b_sp4_rsl1d1+sp3a_klf4
wt1a+wt1b 2.02 small profile SeqLogo of wt1a+wt1b
sp1 2.01 small profile SeqLogo of sp1
mef2d 1.95 small profile SeqLogo of mef2d
irx5a+irx5b_irx3a+irx3b 1.94 small profile SeqLogo of irx5a+irx5b_irx3a+irx3b
nfil3-4+si:dkey-172o19.2 1.88 small profile SeqLogo of nfil3-4+si:dkey-172o19.2
zbtb47b+znf652 1.83 small profile SeqLogo of zbtb47b+znf652
tbx15_tbx1_mgaa_tbx4 1.78 small profile SeqLogo of tbx15_tbx1_mgaa_tbx4
esr1+esr2a+esr2b 1.76 small profile SeqLogo of esr1+esr2a+esr2b
neurod1 1.75 small profile SeqLogo of neurod1
mycn 1.74 small profile SeqLogo of mycn
hoxa9a+hoxa9b 1.74 small profile SeqLogo of hoxa9a+hoxa9b
stat1a+stat2-1_stat1b 1.70 small profile SeqLogo of stat1a+stat2-1_stat1b
SPDEF 1.70 small profile SeqLogo of SPDEF
mecp2 1.70 small profile SeqLogo of mecp2
hoxa2b 1.69 small profile SeqLogo of hoxa2b
hmx4 1.68 small profile SeqLogo of hmx4
irf1b+irf2+irf2a 1.67 small profile SeqLogo of irf1b+irf2+irf2a
atf1 1.65 small profile SeqLogo of atf1
hnf1ba+hnf1bb 1.65 small profile SeqLogo of hnf1ba+hnf1bb
alx1 1.65 small profile SeqLogo of alx1
myf6 1.64 small profile SeqLogo of myf6
nr6a1a 1.64 small profile SeqLogo of nr6a1a
spi1a+spi1b 1.63 small profile SeqLogo of spi1a+spi1b
pou4f3_pou4f1+pou4f4 1.62 small profile SeqLogo of pou4f3_pou4f1+pou4f4
atf3+jdp2b 1.61 small profile SeqLogo of atf3+jdp2b
sp2 1.60 small profile SeqLogo of sp2
tcf12 1.59 small profile SeqLogo of tcf12
fev+fli1a_erg_etv2 1.59 small profile SeqLogo of fev+fli1a_erg_etv2
foxj1a+foxj1b 1.57 small profile SeqLogo of foxj1a+foxj1b
arid3a+arid3b+arid3c 1.55 small profile SeqLogo of arid3a+arid3b+arid3c
barx2 1.55 small profile SeqLogo of barx2
myb+mybl1 1.54 small profile SeqLogo of myb+mybl1
znf384l 1.53 small profile SeqLogo of znf384l
klf12a 1.51 small profile SeqLogo of klf12a
BX548005.1+smarcc2 1.49 small profile SeqLogo of BX548005.1+smarcc2
gsc 1.48 small profile SeqLogo of gsc
nr4a2a 1.45 small profile SeqLogo of nr4a2a
foxd2_foxd5 1.45 small profile SeqLogo of foxd2_foxd5
sox19b+sox3 1.45 small profile SeqLogo of sox19b+sox3
mafk 1.44 small profile SeqLogo of mafk
spi2+spic 1.43 small profile SeqLogo of spi2+spic
nfia 1.42 small profile SeqLogo of nfia
e2f8 1.42 small profile SeqLogo of e2f8
rarga 1.42 small profile SeqLogo of rarga
foxl1 1.41 small profile SeqLogo of foxl1
nr6a1b 1.40 small profile SeqLogo of nr6a1b
foxa3 1.40 small profile SeqLogo of foxa3
rxraa+rxrab+rxrba+rxrgb 1.39 small profile SeqLogo of rxraa+rxrab+rxrba+rxrgb
tefa+tefb 1.39 small profile SeqLogo of tefa+tefb
cebpd 1.39 small profile SeqLogo of cebpd
hoxa11b 1.37 small profile SeqLogo of hoxa11b
foxd3 1.37 small profile SeqLogo of foxd3
tcf7l1a+tcf7l1b+tcf7l2 1.37 small profile SeqLogo of tcf7l1a+tcf7l1b+tcf7l2
meis1a+meis1b 1.36 small profile SeqLogo of meis1a+meis1b
smad2_smad10a+smad4a_smad1 1.36 small profile SeqLogo of smad2_smad10a+smad4a_smad1
maff+mafga+mafgb 1.36 small profile SeqLogo of maff+mafga+mafgb
figla 1.35 small profile SeqLogo of figla
bbx 1.34 small profile SeqLogo of bbx
grhl1 1.33 small profile SeqLogo of grhl1
nkx6.1 1.32 small profile SeqLogo of nkx6.1
fli1b 1.28 small profile SeqLogo of fli1b
hoxa13a+hoxa13b 1.28 small profile SeqLogo of hoxa13a+hoxa13b
foxg1a+foxg1c+foxg1d 1.28 small profile SeqLogo of foxg1a+foxg1c+foxg1d
ehf 1.27 small profile SeqLogo of ehf
pax2a+pax5 1.26 small profile SeqLogo of pax2a+pax5
si:dkey-149i17.7_zic1 1.24 small profile SeqLogo of si:dkey-149i17.7_zic1
TCF4_id4_mespaa+mespab+mespba+mespbb 1.24 small profile SeqLogo of TCF4_id4_mespaa+mespab+mespba+mespbb
drgx_arxb 1.24 small profile SeqLogo of drgx_arxb
sox13 1.24 small profile SeqLogo of sox13
sox9a+sox9b 1.24 small profile SeqLogo of sox9a+sox9b
tbr1b_tbx16+tbx16l+tbx2a+tbx2b 1.23 small profile SeqLogo of tbr1b_tbx16+tbx16l+tbx2a+tbx2b
runx1 1.23 small profile SeqLogo of runx1
hoxc9a 1.22 small profile SeqLogo of hoxc9a
nr2e3 1.21 small profile SeqLogo of nr2e3
klf12b 1.20 small profile SeqLogo of klf12b
pax3a+pax3b 1.20 small profile SeqLogo of pax3a+pax3b
nr1d2a 1.20 small profile SeqLogo of nr1d2a
si:dkey-43p13.5+uncx 1.19 small profile SeqLogo of si:dkey-43p13.5+uncx
nfatc2a 1.18 small profile SeqLogo of nfatc2a
zbtb7a+zbtb7c 1.18 small profile SeqLogo of zbtb7a+zbtb7c
yy1a+yy1b 1.18 small profile SeqLogo of yy1a+yy1b
mef2b 1.18 small profile SeqLogo of mef2b
crx+otx1 1.17 small profile SeqLogo of crx+otx1
runx2a+runx2b 1.16 small profile SeqLogo of runx2a+runx2b
hoxc12a+hoxc12b 1.15 small profile SeqLogo of hoxc12a+hoxc12b
hmx2_hmx3a 1.15 small profile SeqLogo of hmx2_hmx3a
bcl6aa+bcl6ab+bcl6b 1.15 small profile SeqLogo of bcl6aa+bcl6ab+bcl6b
hey2_hey1+heyl 1.14 small profile SeqLogo of hey2_hey1+heyl
gcm2 1.14 small profile SeqLogo of gcm2
barhl2 1.13 small profile SeqLogo of barhl2
foxp1a+foxp1b+foxp3a_foxg1b_foxp2_foxd1+foxd7_foxo1a+foxo1b 1.13 small profile SeqLogo of foxp1a+foxp1b+foxp3a_foxg1b_foxp2_foxd1+foxd7_foxo1a+foxo1b
foxb1b+foxb2 1.13 small profile SeqLogo of foxb1b+foxb2
mecom 1.11 small profile SeqLogo of mecom
prdm1a 1.10 small profile SeqLogo of prdm1a
pou4f2 1.10 small profile SeqLogo of pou4f2
nkx3.3-1 1.10 small profile SeqLogo of nkx3.3-1
rbpja 1.10 small profile SeqLogo of rbpja
zic4+zic6 1.10 small profile SeqLogo of zic4+zic6
nkx2.3+nkx2.7 1.10 small profile SeqLogo of nkx2.3+nkx2.7
pax7a+pax7b+prop1 1.10 small profile SeqLogo of pax7a+pax7b+prop1
mef2ca+mef2cb 1.09 small profile SeqLogo of mef2ca+mef2cb
nfe2l1b+nfe2l2b 1.09 small profile SeqLogo of nfe2l1b+nfe2l2b
tfap4 1.08 small profile SeqLogo of tfap4
zeb1a+zeb1b 1.08 small profile SeqLogo of zeb1a+zeb1b
foxi1+foxi2+foxi3a+foxi3b 1.08 small profile SeqLogo of foxi1+foxi2+foxi3a+foxi3b
sox14+sox14-1+sox21a 1.07 small profile SeqLogo of sox14+sox14-1+sox21a
pitx2 1.07 small profile SeqLogo of pitx2
pou2f2a 1.07