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PRJEB1986: zebrafish developmental stages transcriptome

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Results for VDR+nr1i2_vdrb

Z-value: 0.71

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Transcription factors associated with VDR+nr1i2_vdrb

Gene Symbol Gene ID Gene Info
ENSDARG00000029766 nuclear receptor subfamily 1, group I, member 2
ENSDARG00000112923 vitamin D receptor
ENSDARG00000070721 vitamin D receptor b
ENSDARG00000114864 vitamin D receptor b

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
nr1i2dr11_v1_chr9_+_9502610_95026100.483.6e-02Click!
vdrbdr11_v1_chr6_-_39006449_39006449-0.253.0e-01Click!
CABZ01088036.1dr11_v1_chr23_+_45785563_45785563-0.077.9e-01Click!

Activity profile of VDR+nr1i2_vdrb motif

Sorted Z-values of VDR+nr1i2_vdrb motif

Promoter Log-likelihood Transcript Gene Gene Info
chr19_-_20148469 3.51 ENSDART00000134476
si:ch211-155k24.1
chr20_+_34374735 2.25 ENSDART00000144090
si:dkeyp-11g8.3
chr3_-_34656745 2.06 ENSDART00000144824
zinc finger-like gene 1
chr13_+_45332203 1.96 ENSDART00000110466
si:ch211-168h21.3
chr9_+_15837398 1.86 ENSDART00000141063
si:dkey-103d23.5
chr9_-_31763246 1.76 ENSDART00000114742
si:dkey-250i3.3
chr5_+_22459087 1.71 ENSDART00000134781

chr8_+_23245596 1.70 ENSDART00000143313
si:ch211-196c10.11
chr14_-_41468892 1.53 ENSDART00000173099
ENSDART00000003170
MID1 interacting protein 1, like
chr23_+_5631381 1.50 ENSDART00000149143
plakophilin 1a
chr6_+_9893554 1.26 ENSDART00000064979
Pim proto-oncogene, serine/threonine kinase, related 74
chr9_-_7378566 1.25 ENSDART00000144003
solute carrier family 23, member 3
chr8_+_50742975 1.24 ENSDART00000155664
ENSDART00000160612
si:ch73-6l19.2
chr19_-_9776075 1.08 ENSDART00000140332
si:dkey-14o18.1
chr16_+_19536614 1.05 ENSDART00000112894
ENSDART00000079201
ENSDART00000139357
sp8 transcription factor b
chr7_-_24995631 1.05 ENSDART00000173955
ENSDART00000173791
REST corepressor 2
chr3_-_29977495 0.93 ENSDART00000077111
hydroxysteroid (17-beta) dehydrogenase 14
chr14_+_35383267 0.92 ENSDART00000143818
clathrin interactor 1a
chr14_+_30753666 0.92 ENSDART00000009385
ENSDART00000137782
ENSDART00000172778
Yip1 interacting factor homolog A (S. cerevisiae)
chr17_+_20923691 0.92 ENSDART00000122407
cyclin-dependent kinase 1
chr23_-_44723102 0.91 ENSDART00000129138
monoacylglycerol O-acyltransferase 3a
chr9_+_21306902 0.79 ENSDART00000138554
ENSDART00000004108
exportin 4
chr22_-_4878012 0.77 ENSDART00000110947
ENSDART00000147431
si:ch73-256j6.5
chr21_-_19918286 0.71 ENSDART00000180816
protein phosphatase 1, regulatory subunit 3B
chr9_-_10778615 0.70 ENSDART00000182577

chr12_+_18663154 0.69 ENSDART00000057918
si:ch211-147h1.4
chr14_-_21064199 0.69 ENSDART00000172099
si:dkey-74k8.3
chr10_+_9561066 0.68 ENSDART00000136281
si:ch211-243g18.2
chr14_-_21063977 0.68 ENSDART00000164373
si:dkey-74k8.3
chr14_+_22076596 0.66 ENSDART00000106147
ENSDART00000100278
ENSDART00000131489
solute carrier family 43 (amino acid system L transporter), member 1a
chr3_+_19336286 0.66 ENSDART00000111528
KRI1 homolog
chr10_-_17550931 0.62 ENSDART00000145077
spindle and kinetochore associated complex subunit 1
chr15_+_2421432 0.60 ENSDART00000193772
hephaestin-like 1a
chr15_+_2421729 0.60 ENSDART00000082294
ENSDART00000156428
hephaestin-like 1a
chr21_+_5589923 0.60 ENSDART00000160885
starch binding domain 1
chr5_-_54712159 0.60 ENSDART00000149207
cyclin B1
chr21_+_30470809 0.57 ENSDART00000171648
ENSDART00000126678
ENSDART00000003335
ENSDART00000133478
ENSDART00000140811
ENSDART00000147375
sorting nexin 12
chr21_+_22878834 0.53 ENSDART00000065562
PCF11 cleavage and polyadenylation factor subunit
chr20_+_17581881 0.53 ENSDART00000182832
cadherin 2, type 1, N-cadherin (neuronal)
chr21_+_22878991 0.49 ENSDART00000186399
PCF11 cleavage and polyadenylation factor subunit
chr6_+_50451337 0.47 ENSDART00000155051
myelocytomatosis oncogene homolog
chr12_+_20336070 0.46 ENSDART00000066385
zgc:163057
chr1_-_23595779 0.45 ENSDART00000134860
ENSDART00000138852
ligand dependent nuclear receptor corepressor-like
chr14_+_31473866 0.44 ENSDART00000173088
coiled-coil domain containing 160
chr3_-_24681404 0.43 ENSDART00000161612

chr10_-_22803740 0.42 ENSDART00000079469
ENSDART00000187968
ENSDART00000122543
procollagen C-endopeptidase enhancer a
chr22_+_35205968 0.42 ENSDART00000150467
TSC22 domain family 2
chr15_-_23508214 0.42 ENSDART00000115051
ATP-binding cassette, sub-family G (WHITE), member 4b
chr10_+_15024772 0.42 ENSDART00000135667
si:dkey-88l16.5
chr7_+_65673885 0.41 ENSDART00000169182
parvin, alpha b
chr16_+_16969060 0.41 ENSDART00000182819
ENSDART00000191876
si:ch211-120k19.1
ribosomal protein L18
chr10_+_15025006 0.40 ENSDART00000145192
ENSDART00000140084
si:dkey-88l16.5
chr5_+_37729207 0.40 ENSDART00000184378
CDC42 effector protein (Rho GTPase binding) 2
chr19_-_45985989 0.39 ENSDART00000165897
si:ch211-153f2.3
chr2_-_21167652 0.39 ENSDART00000185792
bmi1 polycomb ring finger oncogene 1b
chr11_-_36263886 0.38 ENSDART00000140397
nuclear transcription factor Y, alpha
chr6_+_59840360 0.38 ENSDART00000154647
DEAD (Asp-Glu-Ala-Asp) box helicase 3b
chr5_+_29160132 0.38 ENSDART00000088827
dipeptidyl-peptidase 7
chr1_+_54687616 0.37 ENSDART00000146677
lysine-rich nucleolar protein 1
chr4_-_20511595 0.37 ENSDART00000185806
Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b
chr17_+_38602602 0.37 ENSDART00000187996
coiled-coil domain containing 88C
chr19_-_31576321 0.35 ENSDART00000103612
tyrosyl-DNA phosphodiesterase 2b
chr3_-_31875138 0.35 ENSDART00000155298
LIM domain containing 2
chr21_-_18972206 0.34 ENSDART00000146743
Pim proto-oncogene, serine/threonine kinase, related 72
chr13_-_36418921 0.34 ENSDART00000135804
ddb1 and cul4 associated factor 5
chr8_-_15991801 0.33 ENSDART00000132005
ATP/GTP binding protein-like 4
chr15_-_28805493 0.33 ENSDART00000179617
CD3e molecule, epsilon associated protein
chr6_-_9630081 0.31 ENSDART00000013066
excision repair cross-complementation group 3
chr16_+_42772678 0.31 ENSDART00000155575
si:ch211-135n15.2
chr14_-_17588345 0.30 ENSDART00000143486
selenoprotein T, 2
chr23_+_1276006 0.30 ENSDART00000162294
utrophin
chr3_+_46425262 0.29 ENSDART00000153690
sc:d0202
chr13_+_18507592 0.29 ENSDART00000142622
si:ch211-198a12.6
chr8_+_45381298 0.28 ENSDART00000149451
ENSDART00000110364
TELO2 interacting protein 2
chr5_-_34609337 0.27 ENSDART00000145792
hexosaminidase B (beta polypeptide)
chr21_+_29179887 0.27 ENSDART00000161941
si:ch211-57b15.1
chr23_+_28809002 0.26 ENSDART00000134121
ENSDART00000183661
peroxisomal biogenesis factor 14
chr15_+_1653779 0.26 ENSDART00000021299
NMD3 ribosome export adaptor
chr11_-_3907937 0.26 ENSDART00000082409
ribophorin I
chr21_+_7121942 0.26 ENSDART00000171603
mitochondrial ribosomal protein S2
chr8_+_21133307 0.25 ENSDART00000056405
mago homolog, exon junction complex core component
chr8_+_1769475 0.24 ENSDART00000079073
serpin peptidase inhibitor, clade D (heparin cofactor), member 1
chr6_-_9922266 0.24 ENSDART00000151549
Pim proto-oncogene, serine/threonine kinase, related 73
chr22_-_20733822 0.24 ENSDART00000133780
si:dkey-3k20.1
chr14_-_24101897 0.23 ENSDART00000143695
cytoplasmic polyadenylation element binding protein 4a
chr17_+_6469419 0.23 ENSDART00000191729
si:dkey-36g24.3
chr4_-_29833326 0.23 ENSDART00000150596
si:ch211-231i17.4
chr24_+_7742441 0.23 ENSDART00000189956
zgc:56095
chr14_-_31856819 0.23 ENSDART00000003345
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
chr20_+_49081967 0.23 ENSDART00000112689
crooked neck pre-mRNA splicing factor 1
chr5_+_64856666 0.23 ENSDART00000050863
zgc:101858
chr15_-_8665662 0.23 ENSDART00000090675
Rho GTPase activating protein 35a
chr3_-_25116208 0.22 ENSDART00000183628
chondroadherin-like a
chr18_+_18879733 0.22 ENSDART00000019581
ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
chr15_-_33640890 0.22 ENSDART00000167705
StAR-related lipid transfer (START) domain containing 13b
chr7_+_25000060 0.21 ENSDART00000039265
ENSDART00000141814
N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
chr6_-_29049022 0.21 ENSDART00000190309
ecotropic viral integration site 5b
chr24_+_19986432 0.21 ENSDART00000184402

chr5_-_32158198 0.21 ENSDART00000187215
ENSDART00000137503
IL-6 subfamily cytokine M17
chr15_+_20530649 0.21 ENSDART00000186312
tumor necrosis factor, alpha-induced protein 1 (endothelial)
chr5_-_69716501 0.21 ENSDART00000158956
MOB kinase activator 1A
chr20_+_33744065 0.21 ENSDART00000015000
HEN methyltransferase 1
chr14_-_29799993 0.21 ENSDART00000133775
ENSDART00000005568
PDZ and LIM domain 3b
chr15_-_38361787 0.21 ENSDART00000155758
transient receptor potential cation channel, subfamily C, member 2a
chr13_+_22731356 0.21 ENSDART00000133064
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)
chr16_+_40954481 0.20 ENSDART00000058587
glycogen synthase kinase binding protein
chr11_+_2642013 0.20 ENSDART00000111324
zgc:193807
chr16_+_23799622 0.20 ENSDART00000046922
RAB13, member RAS oncogene family
chr22_+_34694217 0.20 ENSDART00000111793
hydroxylysine kinase, tandem duplicate 1
chr14_+_45732081 0.20 ENSDART00000110103
coiled-coil domain containing 88B
chr4_-_75172216 0.20 ENSDART00000127522
N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
chr20_-_1454131 0.19 ENSDART00000138059
protein tyrosine phosphatase, receptor type, K
chr25_-_18125769 0.19 ENSDART00000140484
kit ligand a
chr14_+_44774089 0.19 ENSDART00000098643
translocase of outer mitochondrial membrane 5 homolog (yeast)
chr14_+_22297257 0.19 ENSDART00000113676
ATPase phospholipid transporting 10B
chr2_-_17392799 0.19 ENSDART00000136470
ENSDART00000141188
ST3 beta-galactoside alpha-2,3-sialyltransferase 3b
chr25_+_23777469 0.19 ENSDART00000067179
mitochondrial ribosomal protein L23
chr17_-_25563847 0.19 ENSDART00000040032
reticulon 4 interacting protein 1
chr6_-_39080630 0.19 ENSDART00000021520
ENSDART00000128308
eukaryotic translation initiation factor 4Bb
chr21_-_15200556 0.18 ENSDART00000141809
splicing factor SWAP
chr19_-_4010263 0.18 ENSDART00000159605
ENSDART00000165541
MAP7 domain containing 1b
chr17_+_25563979 0.18 ENSDART00000045615
ENSDART00000183162
glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
chr21_+_38089036 0.18 ENSDART00000147219
Kruppel-like factor 8
chr8_-_11324143 0.18 ENSDART00000008215
phosphatidylinositol-4-phosphate 5-kinase, type I, beta b
chr4_+_29967255 0.18 ENSDART00000150383
zinc finger protein 1128
chr4_-_11737939 0.18 ENSDART00000150299
podocalyxin-like
chr22_-_4880603 0.18 ENSDART00000134055
si:ch73-256j6.5
chr5_+_41476443 0.17 ENSDART00000145228
ENSDART00000137981
ENSDART00000142538
protein inhibitor of activated STAT, 2
chr14_-_32486757 0.17 ENSDART00000148830
MCF.2 cell line derived transforming sequence a
chr5_-_1076431 0.17 ENSDART00000168336
si:zfos-128g4.1
chr21_-_25756119 0.17 ENSDART00000002341
claudin c
chr5_-_36949476 0.17 ENSDART00000047269
H3 histone, family 3C
chr3_+_17939828 0.16 ENSDART00000185047
2',3'-cyclic nucleotide 3' phosphodiesterase
chr1_+_41609676 0.16 ENSDART00000183675
mannosyl-oligosaccharide glucosidase
chr2_+_16710889 0.16 ENSDART00000017852
UBX domain protein 7
chr23_-_38054 0.15 ENSDART00000170393

chr18_+_7073130 0.15 ENSDART00000101216
ENSDART00000148947
si:dkey-88e18.2
chr21_+_261490 0.15 ENSDART00000177919
Janus kinase 2a
chr2_+_33052169 0.15 ENSDART00000180008
ring finger protein 220a
chr7_-_12065668 0.15 ENSDART00000101537
mex-3 RNA binding family member B
chr4_-_18454591 0.15 ENSDART00000185200
SCO2 cytochrome c oxidase assembly protein
chr4_+_43246676 0.15 ENSDART00000187588
si:dkey-29j8.1
chr20_-_24165509 0.15 ENSDART00000124919
mitogen-activated protein kinase kinase kinase 7
chr6_-_11812224 0.15 ENSDART00000150989
membrane-associated ring finger (C3HC4) 7
chr5_+_70271799 0.14 ENSDART00000101316
zinc finger protein 618
chr16_+_5901835 0.14 ENSDART00000060519
unc-51 like kinase 4
chr5_+_45921234 0.14 ENSDART00000134355
ankyrin repeat and death domain containing 1B
chr23_-_46040618 0.14 ENSDART00000161415

chr24_+_17345521 0.14 ENSDART00000024722
ENSDART00000154250
enhancer of zeste 2 polycomb repressive complex 2 subunit
chr18_+_20482369 0.14 ENSDART00000100668
kelch repeat and BTB (POZ) domain containing 4
chr1_+_39865748 0.14 ENSDART00000131954
ENSDART00000130270
interferon regulatory factor 2a
chr24_+_37410403 0.13 ENSDART00000186282
si:ch211-183d21.1
chr10_+_42691210 0.13 ENSDART00000193813
Rho-related BTB domain containing 2b
chr7_+_12931396 0.13 ENSDART00000184664
ferritin, heavy polypeptide 1a
chr8_+_25295160 0.13 ENSDART00000049793
glutathione S-transferase mu, tandem duplicate 1
chr22_+_2533514 0.13 ENSDART00000147967
si:ch73-92e7.4
chr23_-_10831995 0.13 ENSDART00000142533
PDZ domain containing RING finger 3a
chr9_-_28616436 0.12 ENSDART00000136985
si:ch73-7i4.2
chr8_+_20918207 0.12 ENSDART00000144039
si:ch73-196i15.5
chr6_-_13498745 0.12 ENSDART00000027684
ENSDART00000189438
myosin light chain kinase b
chr17_+_15674052 0.12 ENSDART00000156726
BTB and CNC homology 1, basic leucine zipper transcription factor 2a
chr12_+_14214755 0.12 ENSDART00000078052
mitochondrial tRNA translation optimization 1
chr9_-_53422084 0.11 ENSDART00000162661
glypican 6b
chr23_+_25308018 0.11 ENSDART00000140463
extended synaptotagmin-like protein 1a
chr20_+_29209767 0.11 ENSDART00000141252
katanin p80 subunit B-like 1
chr2_+_25278107 0.11 ENSDART00000131977
protein phosphatase 2, regulatory subunit B'', alpha
chr20_+_29209926 0.11 ENSDART00000152949
ENSDART00000153016
katanin p80 subunit B-like 1
chr16_+_41135018 0.11 ENSDART00000139435
si:ch211-53m15.2
chr8_-_1267247 0.11 ENSDART00000150064
cell division cycle 14B
chr7_-_24236364 0.11 ENSDART00000010124
solute carrier family 7 (amino acid transporter light chain, L system), member 8a
chr17_-_37054959 0.10 ENSDART00000151921
DNA (cytosine-5-)-methyltransferase 3 alpha b
chr9_+_28140089 0.10 ENSDART00000046880
pleckstrin homology domain containing, family M, member 3
chr6_-_25369295 0.10 ENSDART00000191475
zgc:153916
chr16_-_21692024 0.10 ENSDART00000123597
si:ch211-154o6.2
chr12_+_30653047 0.10 ENSDART00000148562
thrombospondin 2b
chr4_-_18416566 0.09 ENSDART00000033717
CASP2 and RIPK1 domain containing adaptor with death domain
chr14_+_8715527 0.09 ENSDART00000170754
potassium channel, subfamily K, member 4a
chr17_-_50071748 0.09 ENSDART00000075188
zgc:113886
chr7_+_24069421 0.09 ENSDART00000034218
apoptotic chromatin condensation inducer 1b
chr12_+_18543783 0.08 ENSDART00000148326
ENSDART00000134530
MTOR associated protein, LST8 homolog (S. cerevisiae)
chr12_+_24060894 0.08 ENSDART00000021298
ankyrin repeat and SOCS box containing 3
chr22_+_24389135 0.08 ENSDART00000157861
prolyl 3-hydroxylase 2
chr2_-_22575851 0.08 ENSDART00000182932

chr14_-_25309058 0.08 ENSDART00000159569
5-hydroxytryptamine receptor 4
chr3_-_31254979 0.08 ENSDART00000130280
actinoporin-like protein
chr10_-_105100 0.08 ENSDART00000145716
tetratricopeptide repeat domain 3
chr12_+_18542954 0.08 ENSDART00000178845
ENSDART00000185149
ENSDART00000012743
MTOR associated protein, LST8 homolog (S. cerevisiae)
chr6_+_9155271 0.08 ENSDART00000168727
zgc:64065
chr12_+_10134366 0.08 ENSDART00000127343
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
chr20_+_20731633 0.07 ENSDART00000191952
ENSDART00000165224
protein phosphatase 1, regulatory subunit 13Bb
chr11_-_12158412 0.07 ENSDART00000147670
aminopeptidase puromycin sensitive
chr1_-_40914752 0.07 ENSDART00000113087
H6 family homeobox 1
chr7_+_3558512 0.07 ENSDART00000131884
si:dkey-192d15.1
chr3_-_32912787 0.07 ENSDART00000156149
glucose-6-phosphatase b, catalytic subunit
chr16_-_30878521 0.07 ENSDART00000141403
DENN/MADD domain containing 3b
chr5_+_69716458 0.07 ENSDART00000159594
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
chr8_-_43834442 0.06 ENSDART00000191927
adhesion G protein-coupled receptor D1
chr4_-_13921185 0.06 ENSDART00000143202
ENSDART00000080334
YY1 associated factor 2
chr5_+_40224938 0.06 ENSDART00000142897
si:dkey-193c22.2
chr25_+_17860962 0.06 ENSDART00000163153
parathyroid hormone 1a

Network of associatons between targets according to the STRING database.

First level regulatory network of VDR+nr1i2_vdrb

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.4 GO:0071480 response to gamma radiation(GO:0010332) cellular response to gamma radiation(GO:0071480)
0.2 0.7 GO:0005981 regulation of glycogen catabolic process(GO:0005981)
0.2 1.5 GO:0045110 intermediate filament bundle assembly(GO:0045110)
0.2 1.1 GO:0030326 embryonic limb morphogenesis(GO:0030326)
0.2 0.9 GO:0009794 regulation of mitotic cell cycle, embryonic(GO:0009794) mitotic cell cycle, embryonic(GO:0045448)
0.2 0.5 GO:0090248 hindbrain structural organization(GO:0021577) dorsal fin morphogenesis(GO:0035142) cell motility involved in somitogenic axis elongation(GO:0090247) cell migration involved in somitogenic axis elongation(GO:0090248)
0.1 1.0 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.1 0.7 GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000447)
0.1 0.8 GO:0006611 protein export from nucleus(GO:0006611)
0.1 0.6 GO:0007080 mitotic metaphase plate congression(GO:0007080)
0.1 1.4 GO:0006825 copper ion transport(GO:0006825)
0.1 0.9 GO:0045682 regulation of epidermis development(GO:0045682)
0.1 0.2 GO:0033631 cell-cell adhesion mediated by integrin(GO:0033631) regulation of cell-cell adhesion mediated by integrin(GO:0033632)
0.1 0.4 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.2 GO:0048210 Golgi vesicle fusion to target membrane(GO:0048210)
0.0 0.4 GO:0034334 adherens junction maintenance(GO:0034334)
0.0 0.3 GO:0006283 transcription-coupled nucleotide-excision repair(GO:0006283)
0.0 0.4 GO:0031268 pseudopodium organization(GO:0031268) pseudopodium assembly(GO:0031269) regulation of pseudopodium assembly(GO:0031272) positive regulation of pseudopodium assembly(GO:0031274)
0.0 0.2 GO:0002931 response to ischemia(GO:0002931)
0.0 0.2 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 1.8 GO:0071166 ribonucleoprotein complex localization(GO:0071166)
0.0 0.2 GO:0030422 production of siRNA involved in RNA interference(GO:0030422)
0.0 0.4 GO:0006474 N-terminal protein amino acid acetylation(GO:0006474)
0.0 0.1 GO:0070900 mitochondrial tRNA modification(GO:0070900) mitochondrial RNA modification(GO:1900864)
0.0 0.4 GO:0070252 actin-mediated cell contraction(GO:0070252)
0.0 0.4 GO:0036353 histone H2A-K119 monoubiquitination(GO:0036353)
0.0 0.1 GO:0046931 pore complex assembly(GO:0046931)
0.0 0.9 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.2 GO:0097010 eukaryotic translation initiation factor 4F complex assembly(GO:0097010)
0.0 0.3 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.0 0.1 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.0 0.5 GO:0015671 oxygen transport(GO:0015671)
0.0 0.8 GO:0015804 neutral amino acid transport(GO:0015804)
0.0 0.4 GO:0033344 cholesterol efflux(GO:0033344)
0.0 1.0 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.2 GO:0021707 cerebellar granular layer development(GO:0021681) cerebellar granular layer morphogenesis(GO:0021683) cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
0.0 0.2 GO:0035024 negative regulation of Rho protein signal transduction(GO:0035024)
0.0 0.3 GO:0018279 protein N-linked glycosylation via asparagine(GO:0018279)
0.0 0.4 GO:1903845 negative regulation of transforming growth factor beta receptor signaling pathway(GO:0030512) negative regulation of cellular response to transforming growth factor beta stimulus(GO:1903845)
0.0 0.3 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.1 GO:0071850 mitotic cell cycle arrest(GO:0071850)
0.0 0.4 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.4 GO:0032456 endocytic recycling(GO:0032456)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0097125 cyclin B1-CDK1 complex(GO:0097125)
0.1 0.3 GO:1990429 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.1 1.5 GO:0030057 desmosome(GO:0030057)
0.1 0.3 GO:0070209 ASTRA complex(GO:0070209)
0.1 0.6 GO:0030904 retromer complex(GO:0030904)
0.0 0.5 GO:0014704 intercalated disc(GO:0014704)
0.0 0.6 GO:0000940 condensed chromosome outer kinetochore(GO:0000940)
0.0 1.0 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 0.7 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.5 GO:0031838 haptoglobin-hemoglobin complex(GO:0031838)
0.0 0.9 GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane(GO:0033116)
0.0 0.3 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.0 0.4 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.2 GO:0031464 inclusion body(GO:0016234) Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.1 GO:0044279 other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217) other organism cell membrane(GO:0044218) other organism membrane(GO:0044279)
0.0 0.2 GO:0000974 Prp19 complex(GO:0000974)
0.0 0.2 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 0.2 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.2 GO:0031931 TORC1 complex(GO:0031931)
0.0 0.7 GO:0030686 90S preribosome(GO:0030686)
0.0 0.9 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.3 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.2 GO:0031528 microvillus membrane(GO:0031528)
0.0 0.4 GO:0035102 PRC1 complex(GO:0035102)
0.0 0.2 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.3 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.1 GO:0032584 growth cone membrane(GO:0032584)
0.0 0.4 GO:0005791 rough endoplasmic reticulum(GO:0005791)
0.0 1.0 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.8 GO:0005643 nuclear pore(GO:0005643)
0.0 0.3 GO:0005763 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 GO:2001070 starch binding(GO:2001070)
0.1 0.4 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 1.6 GO:0004322 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.1 0.4 GO:0043998 H2A histone acetyltransferase activity(GO:0043998)
0.1 0.9 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 0.8 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.1 0.9 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 0.2 GO:0004113 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.1 0.7 GO:2001069 glycogen binding(GO:2001069)
0.0 0.2 GO:0005173 stem cell factor receptor binding(GO:0005173)
0.0 1.0 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 0.3 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.5 GO:0031720 haptoglobin binding(GO:0031720)
0.0 0.3 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.2 GO:0019202 amino acid kinase activity(GO:0019202)
0.0 0.3 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.4 GO:0001965 G-protein alpha-subunit binding(GO:0001965)
0.0 0.2 GO:0008118 N-acetyllactosaminide alpha-2,3-sialyltransferase activity(GO:0008118)
0.0 0.2 GO:0034057 RNA strand annealing activity(GO:0033592) RNA strand-exchange activity(GO:0034057)
0.0 0.1 GO:0070513 death domain binding(GO:0070513)
0.0 0.5 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.1 GO:0019797 procollagen-proline 3-dioxygenase activity(GO:0019797) peptidyl-proline 3-dioxygenase activity(GO:0031544)
0.0 0.4 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 0.1 GO:0043621 protein self-association(GO:0043621)
0.0 0.8 GO:0015175 neutral amino acid transmembrane transporter activity(GO:0015175)
0.0 1.7 GO:0045296 cadherin binding(GO:0045296)
0.0 0.2 GO:0000900 translation repressor activity, nucleic acid binding(GO:0000900)
0.0 0.2 GO:0061665 SUMO ligase activity(GO:0061665)
0.0 0.3 GO:0043138 3'-5' DNA helicase activity(GO:0043138)
0.0 0.2 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.4 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.0 0.2 GO:0051393 muscle alpha-actinin binding(GO:0051371) alpha-actinin binding(GO:0051393)
0.0 0.1 GO:0008429 phosphatidylethanolamine binding(GO:0008429)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.0 0.1 PID TCR JNK PATHWAY JNK signaling in the CD4+ TCR pathway
0.0 0.7 PID PLK1 PATHWAY PLK1 signaling events
0.0 0.5 PID NCADHERIN PATHWAY N-cadherin signaling events
0.0 0.2 PID IL12 STAT4 PATHWAY IL12 signaling mediated by STAT4

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 REACTOME RAF MAP KINASE CASCADE Genes involved in RAF/MAP kinase cascade
0.1 0.6 REACTOME RECRUITMENT OF NUMA TO MITOTIC CENTROSOMES Genes involved in Recruitment of NuMA to mitotic centrosomes
0.0 1.0 REACTOME PROCESSING OF INTRONLESS PRE MRNAS Genes involved in Processing of Intronless Pre-mRNAs
0.0 0.4 REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA Genes involved in Activation of Chaperone Genes by ATF6-alpha
0.0 0.3 REACTOME HYALURONAN UPTAKE AND DEGRADATION Genes involved in Hyaluronan uptake and degradation
0.0 0.5 REACTOME ADHERENS JUNCTIONS INTERACTIONS Genes involved in Adherens junctions interactions
0.0 0.9 REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S Genes involved in Activation of Chaperone Genes by XBP1(S)
0.0 0.2 REACTOME MRNA 3 END PROCESSING Genes involved in mRNA 3'-end processing
0.0 0.2 REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS Genes involved in Cell-extracellular matrix interactions
0.0 0.2 REACTOME MTORC1 MEDIATED SIGNALLING Genes involved in mTORC1-mediated signalling
0.0 0.1 REACTOME SEROTONIN RECEPTORS Genes involved in Serotonin receptors
0.0 0.3 REACTOME RNA POL I TRANSCRIPTION TERMINATION Genes involved in RNA Polymerase I Transcription Termination
0.0 0.2 REACTOME SIGNALING BY HIPPO Genes involved in Signaling by Hippo
0.0 0.1 REACTOME IRAK2 MEDIATED ACTIVATION OF TAK1 COMPLEX UPON TLR7 8 OR 9 STIMULATION Genes involved in IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation