PRJEB1986: zebrafish developmental stages transcriptome

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
en1b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000098730	engrailed homeobox 1b
en2a Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000026599	engrailed homeobox 2a
en2b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000038868	engrailed homeobox 2b
en2a Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000115233	engrailed homeobox 2a
gbx1 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000071418	gastrulation brain homeobox 1
emx1 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000039569	empty spiracles homeobox 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
en2a	dr11_v1_chr7_-_40993456_40993456	0.85	3.7e-06	Click!
en2b	dr11_v1_chr2_+_29976419_29976419	0.49	3.2e-02	Click!
en1b	dr11_v1_chr1_+_7679328_7679328	0.48	3.8e-02	Click!
gbx1	dr11_v1_chr24_+_34113424_34113424	0.38	1.1e-01	Click!
emx1	dr11_v1_chr13_+_15004398_15004398	0.26	2.8e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr4_+_306036 Show fit	2.65	ENSDART00000103659	msgn1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mesogenin 1
chr8_-_50888806 Show fit	2.48	ENSDART00000053750	acsl2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	acyl-CoA synthetase long chain family member 2
chr10_+_16036246 Show fit	2.42	ENSDART00000141586 ENSDART00000135868 ENSDART00000065037 ENSDART00000124502	lmnb1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lamin B1
chr15_+_1796313 Show fit	1.96	ENSDART00000126253	fam124b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 124B
chr1_+_34696503 Show fit	1.62	ENSDART00000186106	CR339054.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr17_+_8799451 Show fit	1.58	ENSDART00000189814 ENSDART00000191577	tonsl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tonsoku-like, DNA repair protein
chr2_+_20793982 Show fit	1.57	ENSDART00000014785	prg4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	proteoglycan 4a
chr19_-_19871211 Show fit	1.57	ENSDART00000170980	evx1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	even-skipped homeobox 1
chr2_+_1714640 Show fit	1.55	ENSDART00000086761 ENSDART00000111613	adgrl2b.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit adgrl2b.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adhesion G protein-coupled receptor L2b, tandem duplicate 1 adhesion G protein-coupled receptor L2b, tandem duplicate 1
chr12_-_16941319 Show fit	1.53	ENSDART00000109968	zgc:174855 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:174855
chr4_+_34343524 Show fit	1.50	ENSDART00000171694	si:ch211-246b8.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-246b8.5
chr25_+_14507567 Show fit	1.44	ENSDART00000015681	dbx1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	developing brain homeobox 1b
chr1_+_33668236 Show fit	1.39	ENSDART00000122316 ENSDART00000102184	arl13b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ADP-ribosylation factor-like 13b
chr13_+_22295905 Show fit	1.37	ENSDART00000180133 ENSDART00000181125	usp54a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin specific peptidase 54a
chr16_+_28994709 Show fit	1.37	ENSDART00000088023	gon4l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	gon-4-like (C. elegans)
chr7_-_25895189 Show fit	1.36	ENSDART00000173599 ENSDART00000079235 ENSDART00000173786 ENSDART00000173602 ENSDART00000079245 ENSDART00000187568 ENSDART00000173505	cd99l2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CD99 molecule-like 2
chr24_+_19415124 Show fit	1.32	ENSDART00000186931	sulf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sulfatase 1
chr5_+_66433287 Show fit	1.27	ENSDART00000170757	kntc1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinetochore associated 1
chr13_+_30903816 Show fit	1.25	ENSDART00000191727	ercc6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	excision repair cross-complementation group 6
chr10_-_44560165 Show fit	1.23	ENSDART00000181217 ENSDART00000076084	npm2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nucleophosmin/nucleoplasmin, 2b
chr12_-_16636627 Show fit	1.16	ENSDART00000128811	si:dkey-239j18.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-239j18.3
chr19_+_15521997 Show fit	1.16	ENSDART00000003164	ppp1r8a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 1, regulatory subunit 8a
chr5_-_12219572 Show fit	1.14	ENSDART00000167834	nos1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nitric oxide synthase 1 (neuronal)
chr4_-_8014463 Show fit	1.14	ENSDART00000036153	ccdc3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	coiled-coil domain containing 3a
chr2_+_4146606 Show fit	1.14	ENSDART00000171170	mib1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mindbomb E3 ubiquitin protein ligase 1
chr18_-_25568994 Show fit	1.13	ENSDART00000133029	si:ch211-13k12.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-13k12.2
chr13_-_42400647 Show fit	1.09	ENSDART00000043069	march5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	membrane-associated ring finger (C3HC4) 5
chr10_+_17371356 Show fit	1.08	ENSDART00000122663	sppl3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	signal peptide peptidase 3
chr2_+_56213694 Show fit	1.08	ENSDART00000162582	upf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	upf1 regulator of nonsense transcripts homolog (yeast)
chr10_-_35257458 Show fit	1.08	ENSDART00000143890 ENSDART00000139107 ENSDART00000082445	prr11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	proline rich 11
chr22_-_12746539 Show fit	1.06	ENSDART00000175374	plcd4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phospholipase C, delta 4a
chr9_-_20372977 Show fit	1.05	ENSDART00000113418	igsf3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	immunoglobulin superfamily, member 3
chr12_-_16558106 Show fit	1.03	ENSDART00000109033	si:dkey-269i1.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-269i1.4
chr15_+_34988148 Show fit	1.03	ENSDART00000076269	ccdc105 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	coiled-coil domain containing 105
chr2_+_4146299 Show fit	1.02	ENSDART00000173418	mib1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mindbomb E3 ubiquitin protein ligase 1
chr15_+_23799461 Show fit	1.02	ENSDART00000154885	si:ch211-167j9.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-167j9.4
chr19_+_1831911 Show fit	1.02	ENSDART00000166653	ptk2aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein tyrosine kinase 2aa
chr20_-_9095105 Show fit	1.00	ENSDART00000140792	oma1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	OMA1 zinc metallopeptidase
chr22_+_4488454 Show fit	0.99	ENSDART00000170620	ctxn1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cortexin 1
chr6_-_43283122 Show fit	0.99	ENSDART00000186022	frmd4ba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FERM domain containing 4Ba
chr12_-_35830625 Show fit	0.98	ENSDART00000180028	CU459056.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr2_-_55298075 Show fit	0.97	ENSDART00000186404 ENSDART00000149062	rab8a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RAB8A, member RAS oncogene family
chr3_-_12930217 Show fit	0.96	ENSDART00000166322	pdgfab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	platelet-derived growth factor alpha polypeptide b
chr16_-_22930925 Show fit	0.93	ENSDART00000133819	si:dkey-246i14.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-246i14.3
chr25_+_35891342 Show fit	0.92	ENSDART00000147093	lsm14aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LSM14A mRNA processing body assembly factor a
chr13_+_27232848 Show fit	0.89	ENSDART00000138043	rin2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Ras and Rab interactor 2
chr5_+_68807170 Show fit	0.89	ENSDART00000017849	her7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hairy and enhancer of split related-7
chr3_-_23643751 Show fit	0.88	ENSDART00000078425 ENSDART00000140264	eve1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	even-skipped-like1
chr20_-_23426339 Show fit	0.88	ENSDART00000004625	zar1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zygote arrest 1
chr4_+_9400012 Show fit	0.88	ENSDART00000191960	tmtc1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane and tetratricopeptide repeat containing 1
chr21_-_31013817 Show fit	0.87	ENSDART00000065504	ncbp3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear cap binding subunit 3
chr6_+_39232245 Show fit	0.87	ENSDART00000187351	b4galnt1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	beta-1,4-N-acetyl-galactosaminyl transferase 1b
chr24_+_1023839 Show fit	0.86	ENSDART00000082526	zgc:111976 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:111976
chr16_+_54209504 Show fit	0.86	ENSDART00000020033	xrcc1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	X-ray repair complementing defective repair in Chinese hamster cells 1
chr14_+_45406299 Show fit	0.86	ENSDART00000173142 ENSDART00000112377	map1lc3cl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microtubule-associated protein 1 light chain 3 gamma, like
chr1_-_55248496 Show fit	0.85	ENSDART00000098615	nanos3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nanos homolog 3
chr8_+_29986265 Show fit	0.85	ENSDART00000148258	ptch1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	patched 1
chr5_-_14326959 Show fit	0.85	ENSDART00000137355	tet3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tet methylcytosine dioxygenase 3
chr8_+_52515188 Show fit	0.83	ENSDART00000163668	si:ch1073-392o20.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch1073-392o20.2
chr21_+_43404945 Show fit	0.82	ENSDART00000142234	frmd7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FERM domain containing 7
chr3_+_22035863 Show fit	0.82	ENSDART00000177169	cdc27 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cell division cycle 27
chr23_-_17003533 Show fit	0.82	ENSDART00000080545	dnmt3bb.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DNA (cytosine-5-)-methyltransferase 3 beta, duplicate b.2
chr15_-_16177603 Show fit	0.82	ENSDART00000156352	si:ch211-259g3.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-259g3.4
chr9_+_38372216 Show fit	0.81	ENSDART00000141895	plcd4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phospholipase C, delta 4b
chr7_-_51368681 Show fit	0.80	ENSDART00000146385	arhgap36 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Rho GTPase activating protein 36
chr14_-_30387894 Show fit	0.77	ENSDART00000176136	slc7a2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
chr3_-_16719244 Show fit	0.76	ENSDART00000055859	pold1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	polymerase (DNA directed), delta 1, catalytic subunit
chr24_-_34680956 Show fit	0.76	ENSDART00000171009	ctnna1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	catenin (cadherin-associated protein), alpha 1
chr13_-_35808904 Show fit	0.76	ENSDART00000171667	map3k4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitogen-activated protein kinase kinase kinase 4
chr4_-_9891874 Show fit	0.75	ENSDART00000067193	adm2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adrenomedullin 2a
chr4_+_77943184 Show fit	0.75	ENSDART00000159094	pacsin2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein kinase C and casein kinase substrate in neurons 2
chr9_+_25568839 Show fit	0.74	ENSDART00000177342	zeb2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger E-box binding homeobox 2a
chr2_+_26288301 Show fit	0.74	ENSDART00000017668	ptbp1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	polypyrimidine tract binding protein 1a
chr18_-_20458840 Show fit	0.73	ENSDART00000177125	kif23 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinesin family member 23
chr17_+_8799661 Show fit	0.73	ENSDART00000105326	tonsl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tonsoku-like, DNA repair protein
chr11_+_33818179 Show fit	0.72	ENSDART00000109418	spoplb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	speckle-type POZ protein-like b
chr8_-_52562672 Show fit	0.72	ENSDART00000159333 ENSDART00000159974	si:ch73-199g24.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-199g24.2
chr12_-_48168135 Show fit	0.72	ENSDART00000186624	pald1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphatase domain containing, paladin 1a
chr5_+_59392183 Show fit	0.71	ENSDART00000082983 ENSDART00000180882	clip2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CAP-GLY domain containing linker protein 2
chr12_-_16694092 Show fit	0.71	ENSDART00000047916	ctslb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cathepsin Lb
chr23_-_18130264 Show fit	0.71	ENSDART00000016976	nucks1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear casein kinase and cyclin-dependent kinase substrate 1b
chr9_-_35633827 Show fit	0.70	ENSDART00000077745	zp2l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zona pellucida glycoprotein 2, like 1
chr23_+_44374041 Show fit	0.70	ENSDART00000136056	ephb4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	eph receptor B4b
chr3_-_15210491 Show fit	0.69	ENSDART00000037906	hirip3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	HIRA interacting protein 3
chr21_+_26390549 Show fit	0.69	ENSDART00000185643	tmsb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	thymosin, beta
chr12_-_16877136 Show fit	0.68	ENSDART00000152593	si:dkey-269i1.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-269i1.4
chr18_+_9362455 Show fit	0.68	ENSDART00000187025	sema3ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab
chr23_-_1017605 Show fit	0.66	ENSDART00000138290	cdh26.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cadherin 26, tandem duplicate 1
chr25_+_16116740 Show fit	0.65	ENSDART00000139778	far1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fatty acyl CoA reductase 1
chr7_+_15872357 Show fit	0.65	ENSDART00000165757	pax6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paired box 6b
chr8_+_48484455 Show fit	0.65	ENSDART00000122737	PRDM16 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-263k4.2
chr2_+_11685742 Show fit	0.65	ENSDART00000138562	greb1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	growth regulation by estrogen in breast cancer-like
chr5_-_68795063 Show fit	0.64	ENSDART00000016307	her1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hairy-related 1
chr6_-_12275836 Show fit	0.64	ENSDART00000189980	pkp4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	plakophilin 4
chr23_+_42254960 Show fit	0.64	ENSDART00000102980	zcchc11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger, CCHC domain containing 11
chr3_+_39663987 Show fit	0.64	ENSDART00000184614 ENSDART00000184573 ENSDART00000183127	epn2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	epsin 2
chr11_-_35171768 Show fit	0.64	ENSDART00000192896	traip Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TRAF-interacting protein
chr5_-_69004007 Show fit	0.63	ENSDART00000137443	ank1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ankyrin 1, erythrocytic a
chr5_-_68779747 Show fit	0.63	ENSDART00000192636 ENSDART00000188039	mepce Links NCBI UniProt ZFIN ENSEMBL Google Show fit	methylphosphate capping enzyme
chr12_-_18393408 Show fit	0.62	ENSDART00000159674	tom1l2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	target of myb1 like 2 membrane trafficking protein
chr5_+_19933356 Show fit	0.62	ENSDART00000088819	ankrd13a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ankyrin repeat domain 13A
chr17_-_20118145 Show fit	0.62	ENSDART00000149737 ENSDART00000165606	ryr2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ryanodine receptor 2b (cardiac)
chr3_+_13842554 Show fit	0.62	ENSDART00000162317 ENSDART00000158068	ilf3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	interleukin enhancer binding factor 3b
chr17_+_16046314 Show fit	0.61	ENSDART00000154554 ENSDART00000154338 ENSDART00000155336	si:ch73-204p21.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-204p21.2
chr12_-_43664682 Show fit	0.61	ENSDART00000159423	foxi1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	forkhead box i1
chr23_-_31913231 Show fit	0.61	ENSDART00000146852 ENSDART00000085054	mtfr2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial fission regulator 2
chr9_-_21460164 Show fit	0.60	ENSDART00000133469	zmym2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger, MYM-type 2
chr11_+_18873113 Show fit	0.60	ENSDART00000103969 ENSDART00000103968	magi1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	membrane associated guanylate kinase, WW and PDZ domain containing 1b
chr17_+_24821627 Show fit	0.60	ENSDART00000112389	wdr43 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WD repeat domain 43
chr6_+_11850359 Show fit	0.60	ENSDART00000109552 ENSDART00000188139 ENSDART00000181499 ENSDART00000178269	baz2ba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	bromodomain adjacent to zinc finger domain, 2Ba
chr19_+_31585917 Show fit	0.60	ENSDART00000132182	gmnn Links NCBI UniProt ZFIN ENSEMBL Google Show fit	geminin, DNA replication inhibitor
chr4_-_43388943 Show fit	0.59	ENSDART00000150796	si:dkey-29j8.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-29j8.2
chr18_+_9171778 Show fit	0.59	ENSDART00000101192	sema3d Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
chr2_+_6253246 Show fit	0.59	ENSDART00000058256 ENSDART00000076700	zp3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zona pellucida glycoprotein 3b
chr24_-_2450597 Show fit	0.58	ENSDART00000188080 ENSDART00000093331	rreb1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ras responsive element binding protein 1a
chr6_+_41191482 Show fit	0.58	ENSDART00000000877	opn1mw3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	opsin 1 (cone pigments), medium-wave-sensitive, 3
chr14_-_15990361 Show fit	0.58	ENSDART00000168075	trim105 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tripartite motif containing 105
chr2_-_56385373 Show fit	0.58	ENSDART00000169101	cers4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ceramide synthase 4b
chr4_-_56954002 Show fit	0.58	ENSDART00000160934	si:dkey-269o24.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-269o24.1
chr10_+_35257651 Show fit	0.57	ENSDART00000028940	styxl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	serine/threonine/tyrosine interacting-like 1
chr13_-_21660203 Show fit	0.57	ENSDART00000100925	mxtx1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mix-type homeobox gene 1
chr11_+_24703108 Show fit	0.57	ENSDART00000159173	gpr25 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	G protein-coupled receptor 25
chr1_+_513986 Show fit	0.56	ENSDART00000109083 ENSDART00000081945	txnl4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	thioredoxin-like 4B
chr6_-_40922971 Show fit	0.56	ENSDART00000155363	sfi1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SFI1 centrin binding protein
chr10_+_8680730 Show fit	0.56	ENSDART00000011987	isl1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	islet1, like
chr24_-_6078222 Show fit	0.56	ENSDART00000146830	apbb1ip Links NCBI UniProt ZFIN ENSEMBL Google Show fit	amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein
chr7_+_38936132 Show fit	0.56	ENSDART00000173945	creb3l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cAMP responsive element binding protein 3-like 1
chr16_+_6021908 Show fit	0.55	ENSDART00000163786	BX511115.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr17_+_12865746 Show fit	0.55	ENSDART00000157083	ralgapa1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Ral GTPase activating protein, alpha subunit 1 (catalytic)
chr17_+_12813316 Show fit	0.55	ENSDART00000155629	ralgapa1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Ral GTPase activating protein, alpha subunit 1 (catalytic)
chr12_+_2446837 Show fit	0.54	ENSDART00000112032	ARHGAP22 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-191m6.4
chr15_-_47848544 Show fit	0.54	ENSDART00000098711	eif3k Links NCBI UniProt ZFIN ENSEMBL Google Show fit	eukaryotic translation initiation factor 3, subunit K
chr8_+_21353878 Show fit	0.54	ENSDART00000056420	alas2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	aminolevulinate, delta-, synthase 2
chr15_-_590787 Show fit	0.54	ENSDART00000189367	si:ch73-144d13.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-144d13.5
chr2_+_41526904 Show fit	0.53	ENSDART00000127520	acvr1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	activin A receptor, type 1 like
chr8_-_15129573 Show fit	0.53	ENSDART00000142358	bcar3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	BCAR3, NSP family adaptor protein
chr11_-_15296805 Show fit	0.53	ENSDART00000124968	rpn2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribophorin II
chr19_-_30510259 Show fit	0.53	ENSDART00000135128 ENSDART00000186169 ENSDART00000182974 ENSDART00000187797	bag6l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	BCL2 associated athanogene 6, like
chr22_-_4439311 Show fit	0.53	ENSDART00000169317	uhrf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin-like with PHD and ring finger domains 1
chr15_+_46313082 Show fit	0.51	ENSDART00000153830	si:ch1073-190k2.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch1073-190k2.1
chr4_-_49582108 Show fit	0.51	ENSDART00000154999	si:dkey-159n16.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-159n16.2
chr10_+_17714866 Show fit	0.51	ENSDART00000039969	slc20a1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 20 (phosphate transporter), member 1b
chr8_-_23612462 Show fit	0.51	ENSDART00000025024	slc38a5b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 38, member 5b
chr23_-_31913069 Show fit	0.50	ENSDART00000135526	mtfr2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial fission regulator 2
chr21_-_15200556 Show fit	0.50	ENSDART00000141809	sfswap Links NCBI UniProt ZFIN ENSEMBL Google Show fit	splicing factor SWAP
chr1_-_7970653 Show fit	0.50	ENSDART00000188909	si:dkey-79f11.7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-79f11.7
chr1_+_21731382 Show fit	0.50	ENSDART00000054395	pax5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paired box 5
chr4_-_71152937 Show fit	0.50	ENSDART00000191017	si:dkey-193i10.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-193i10.4
chr3_-_26183699 Show fit	0.50	ENSDART00000147517 ENSDART00000140731	si:ch211-11k18.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-11k18.4
chr10_+_6884627 Show fit	0.50	ENSDART00000125262 ENSDART00000121729 ENSDART00000105384	ddx4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
chr23_-_45705525 Show fit	0.50	ENSDART00000148959	ednrab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	endothelin receptor type Ab
chr7_-_59165640 Show fit	0.49	ENSDART00000170853	haus6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	HAUS augmin-like complex, subunit 6
chr1_-_46981134 Show fit	0.49	ENSDART00000130607	pknox1.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pbx/knotted 1 homeobox 1.2
chr11_-_25418856 Show fit	0.49	ENSDART00000013714	gata1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GATA binding protein 1a
chr19_+_712127 Show fit	0.49	ENSDART00000093281 ENSDART00000180002 ENSDART00000146050	fhod3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	formin homology 2 domain containing 3a
chr9_+_25776971 Show fit	0.48	ENSDART00000146011	zeb2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger E-box binding homeobox 2a
chr24_-_1151334 Show fit	0.48	ENSDART00000039700 ENSDART00000177356	itgb1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	integrin, beta 1a
chr4_+_9450415 Show fit	0.48	ENSDART00000189690	tmtc1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane and tetratricopeptide repeat containing 1
chr14_-_33945692 Show fit	0.48	ENSDART00000168546 ENSDART00000189778	zdhhc24 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger, DHHC-type containing 24
chr7_-_19642417 Show fit	0.47	ENSDART00000160936	si:ch211-212k18.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-212k18.4
chr4_+_9177997 Show fit	0.47	ENSDART00000057254 ENSDART00000154614	nfyba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear transcription factor Y, beta a
chr15_+_6774994 Show fit	0.47	ENSDART00000170011	si:ch1073-228b5.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch1073-228b5.2
chr19_+_12406583 Show fit	0.47	ENSDART00000013865 ENSDART00000151535	seh1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SEH1-like (S. cerevisiae)
chr6_+_4229360 Show fit	0.47	ENSDART00000191347 ENSDART00000130642	FO082877.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr17_+_24722646 Show fit	0.47	ENSDART00000138356	mtfr1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial fission regulator 1-like
chr11_-_6974022 Show fit	0.46	ENSDART00000172851	COMP Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-43f4.1
chr21_-_37973819 Show fit	0.46	ENSDART00000133405	ripply1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ripply transcriptional repressor 1
chr3_+_18807006 Show fit	0.46	ENSDART00000180091	tnpo2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transportin 2 (importin 3, karyopherin beta 2b)
chr4_+_40265583 Show fit	0.46	ENSDART00000151870	si:ch211-246n15.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-246n15.2
chr22_+_2660505 Show fit	0.46	ENSDART00000135555 ENSDART00000031485	znf1162 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 1162
chr19_+_26681848 Show fit	0.46	ENSDART00000138322	si:dkey-27c15.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-27c15.3
chr4_+_11723852 Show fit	0.45	ENSDART00000028820	mkln1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	muskelin 1, intracellular mediator containing kelch motifs
chr8_+_7756893 Show fit	0.45	ENSDART00000191894	fgd1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FYVE, RhoGEF and PH domain containing 1
chr2_-_50272077 Show fit	0.45	ENSDART00000127623	cul1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cullin 1a
chr22_-_881725 Show fit	0.45	ENSDART00000035514	cept1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	choline/ethanolamine phosphotransferase 1b
chr21_+_34088110 Show fit	0.45	ENSDART00000145123 ENSDART00000029599 ENSDART00000147519	mtmr1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myotubularin related protein 1b
chr3_-_38918697 Show fit	0.44	ENSDART00000145630	si:dkey-106c17.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-106c17.2
chr19_-_20430892 Show fit	0.44	ENSDART00000111409	tbc1d5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TBC1 domain family, member 5
chr4_+_6032640 Show fit	0.44	ENSDART00000157487	tfec Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transcription factor EC
chr5_-_67241633 Show fit	0.44	ENSDART00000114783	clip1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CAP-GLY domain containing linker protein 1a
chr15_+_36309070 Show fit	0.44	ENSDART00000157034	gmnc Links NCBI UniProt ZFIN ENSEMBL Google Show fit	geminin coiled-coil domain containing
chr7_+_65813301 Show fit	0.44	ENSDART00000187449 ENSDART00000179834 ENSDART00000082740 ENSDART00000178627	tead1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TEA domain family member 1b
chr22_+_5176255 Show fit	0.43	ENSDART00000092647	cers1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ceramide synthase 1
chr1_-_51719110 Show fit	0.43	ENSDART00000190574	rnaseh2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribonuclease H2, subunit A
chr21_-_23017478 Show fit	0.42	ENSDART00000024309	rb1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	retinoblastoma 1
chr24_+_22485710 Show fit	0.42	ENSDART00000146058	si:dkey-40h20.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-40h20.1
chr18_+_17725410 Show fit	0.41	ENSDART00000090608	rspry1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger and SPRY domain containing 1
chr15_-_2497568 Show fit	0.41	ENSDART00000080398	neu4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sialidase 4
chr18_-_25646286 Show fit	0.41	ENSDART00000099511 ENSDART00000186890	si:ch211-13k12.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-13k12.2
chr24_-_25004553 Show fit	0.41	ENSDART00000080997 ENSDART00000136860	zdhhc20b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger, DHHC-type containing 20b
chr5_+_63302660 Show fit	0.41	ENSDART00000142131	si:ch73-376l24.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-376l24.2
chr9_+_19529951 Show fit	0.41	ENSDART00000125416	pknox1.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pbx/knotted 1 homeobox 1.1
chr10_+_16584382 Show fit	0.40	ENSDART00000112039	CR790388.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr15_-_5178899 Show fit	0.39	ENSDART00000132148	or126-4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	odorant receptor, family E, subfamily 126, member 4
chr23_-_333457 Show fit	0.39	ENSDART00000114486	uhrf1bp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UHRF1 binding protein 1
chr16_-_41714988 Show fit	0.39	ENSDART00000138798	cep85 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosomal protein 85
chr18_+_24921587 Show fit	0.39	ENSDART00000191345	rgma Links NCBI UniProt ZFIN ENSEMBL Google Show fit	repulsive guidance molecule family member a
chr9_-_32753535 Show fit	0.39	ENSDART00000060006	olig2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	oligodendrocyte lineage transcription factor 2
chr12_-_33817114 Show fit	0.39	ENSDART00000161265	twnk Links NCBI UniProt ZFIN ENSEMBL Google Show fit	twinkle mtDNA helicase
chr8_+_17168114 Show fit	0.38	ENSDART00000183901	cenph Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centromere protein H

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.9	2.6	GO:0048341	paraxial mesoderm morphogenesis(GO:0048340) paraxial mesoderm formation(GO:0048341)
0.8	2.5	GO:0021519	optic cup formation involved in camera-type eye development(GO:0003408) spinal cord association neuron specification(GO:0021519)
0.5	1.4	GO:1903441	receptor localization to nonmotile primary cilium(GO:0097500) protein localization to ciliary membrane(GO:1903441)
0.4	1.1	GO:0098923	retrograde trans-synaptic signaling by soluble gas(GO:0098923) retrograde trans-synaptic signaling by nitric oxide(GO:0098924)
0.4	1.1	GO:1901232	regulation of convergent extension involved in axis elongation(GO:1901232) positive regulation of epiboly involved in gastrulation with mouth forming second(GO:1904088)
0.3	1.0	GO:1900182	positive regulation of protein localization to nucleus(GO:1900182) regulation of protein localization to Cajal body(GO:1904869) positive regulation of protein localization to Cajal body(GO:1904871)
0.3	0.9	GO:0097067	cellular response to thyroid hormone stimulus(GO:0097067)
0.2	1.0	GO:0048210	Golgi vesicle fusion to target membrane(GO:0048210)
0.2	1.9	GO:0060573	ventral spinal cord interneuron specification(GO:0021521) cell fate specification involved in pattern specification(GO:0060573)
0.2	1.2	GO:0000012	single strand break repair(GO:0000012)
0.2	0.9	GO:0030718	germ-line stem cell population maintenance(GO:0030718)
0.2	1.5	GO:0021910	smoothened signaling pathway involved in ventral spinal cord patterning(GO:0021910) regulation of myotome development(GO:2000290)
0.2	0.8	GO:0006297	nucleotide-excision repair, DNA gap filling(GO:0006297)
0.2	0.7	GO:0060471	negative regulation of fertilization(GO:0060467) prevention of polyspermy(GO:0060468) cortical granule exocytosis(GO:0060471)
0.2	1.3	GO:0006283	transcription-coupled nucleotide-excision repair(GO:0006283)
0.2	1.2	GO:0090243	fibroblast growth factor receptor signaling pathway involved in somitogenesis(GO:0090243)
0.2	0.9	GO:0006370	7-methylguanosine mRNA capping(GO:0006370)
0.2	0.7	GO:0043152	induction of bacterial agglutination(GO:0043152)
0.2	0.8	GO:0032616	interleukin-13 production(GO:0032616) regulation of interleukin-13 production(GO:0032656)
0.2	0.8	GO:0032776	DNA methylation on cytosine(GO:0032776) regulation of histone H3-K9 methylation(GO:0051570)
0.2	0.6	GO:0048890	epidermal cell fate specification(GO:0009957) lateral line ganglion development(GO:0048890)
0.1	0.7	GO:0002164	larval development(GO:0002164) larval heart development(GO:0007508)
0.1	1.3	GO:0006465	signal peptide processing(GO:0006465)
0.1	0.6	GO:2001244	positive regulation of intrinsic apoptotic signaling pathway(GO:2001244)
0.1	0.5	GO:0035124	embryonic caudal fin morphogenesis(GO:0035124)
0.1	0.4	GO:0021742	abducens nucleus development(GO:0021742)
0.1	0.8	GO:1902837	L-arginine import(GO:0043091) amino acid import across plasma membrane(GO:0089718) arginine import(GO:0090467) L-arginine import across plasma membrane(GO:0097638) L-arginine transport(GO:1902023) L-arginine import into cell(GO:1902765) amino acid import into cell(GO:1902837) L-arginine transmembrane transport(GO:1903400) arginine transmembrane transport(GO:1903826)
0.1	0.5	GO:0089709	L-histidine transmembrane transport(GO:0089709) L-histidine transport(GO:1902024)
0.1	2.6	GO:0031297	replication fork processing(GO:0031297)
0.1	1.0	GO:1990845	adaptive thermogenesis(GO:1990845)
0.1	0.5	GO:0030224	monocyte differentiation(GO:0030224)
0.1	1.0	GO:0031954	positive regulation of protein autophosphorylation(GO:0031954)
0.1	0.2	GO:0035767	endothelial cell chemotaxis(GO:0035767)
0.1	0.7	GO:0048755	branching morphogenesis of a nerve(GO:0048755)
0.1	0.2	GO:0006978	DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:0006978) DNA damage response, signal transduction resulting in transcription(GO:0042772)
0.1	0.3	GO:0046125	deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.1	0.3	GO:0048785	hatching gland development(GO:0048785)
0.1	0.7	GO:0040016	embryonic cleavage(GO:0040016)
0.1	0.5	GO:0003319	cardioblast migration to the midline involved in heart rudiment formation(GO:0003319)
0.1	1.4	GO:0045740	positive regulation of DNA replication(GO:0045740)
0.1	0.8	GO:0048635	negative regulation of muscle organ development(GO:0048635)
0.1	0.7	GO:0090104	pancreatic D cell differentiation(GO:0003311) pancreatic epsilon cell differentiation(GO:0090104)
0.1	2.6	GO:0001757	somite specification(GO:0001757)
0.1	0.4	GO:1903251	multi-ciliated epithelial cell differentiation(GO:1903251)
0.1	2.2	GO:0035338	long-chain fatty-acyl-CoA biosynthetic process(GO:0035338)
0.1	0.9	GO:0042661	regulation of mesodermal cell fate specification(GO:0042661)
0.1	0.5	GO:0097065	anterior head development(GO:0097065)
0.1	0.5	GO:0000395	mRNA 5'-splice site recognition(GO:0000395)
0.1	0.3	GO:1900364	negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA polyadenylation(GO:1900364)
0.1	0.4	GO:0043137	DNA replication, removal of RNA primer(GO:0043137)
0.1	0.3	GO:0043553	negative regulation of phosphatidylinositol 3-kinase activity(GO:0043553) negative regulation of lipid kinase activity(GO:0090219)
0.1	0.4	GO:0031061	negative regulation of histone methylation(GO:0031061)
0.1	0.1	GO:0021531	spinal cord radial glial cell differentiation(GO:0021531)
0.1	0.2	GO:0002926	tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis.(GO:0002926)
0.1	1.0	GO:0007172	signal complex assembly(GO:0007172)
0.1	0.7	GO:0060118	vestibular receptor cell differentiation(GO:0060114) vestibular receptor cell development(GO:0060118)
0.1	0.4	GO:0031293	membrane protein intracellular domain proteolysis(GO:0031293)
0.1	0.2	GO:1903003	positive regulation of protein deubiquitination(GO:1903003)
0.1	0.7	GO:0001765	membrane raft assembly(GO:0001765) plasma membrane raft assembly(GO:0044854) plasma membrane raft organization(GO:0044857) caveola assembly(GO:0070836)
0.1	0.4	GO:0031116	positive regulation of microtubule polymerization(GO:0031116)
0.1	0.3	GO:0035610	protein side chain deglutamylation(GO:0035610)
0.1	0.8	GO:0045842	positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.1	0.5	GO:0034063	stress granule assembly(GO:0034063)
0.1	0.7	GO:0000002	mitochondrial genome maintenance(GO:0000002)
0.1	0.2	GO:1903332	regulation of protein folding(GO:1903332) positive regulation of protein folding(GO:1903334) regulation of chaperone-mediated protein folding(GO:1903644) positive regulation of chaperone-mediated protein folding(GO:1903646)
0.1	0.9	GO:0001574	ganglioside biosynthetic process(GO:0001574)
0.1	0.3	GO:0030205	dermatan sulfate metabolic process(GO:0030205)
0.1	0.2	GO:1902895	pri-miRNA transcription from RNA polymerase II promoter(GO:0061614) regulation of pri-miRNA transcription from RNA polymerase II promoter(GO:1902893) positive regulation of pri-miRNA transcription from RNA polymerase II promoter(GO:1902895)
0.1	0.3	GO:0031571	mitotic G1 DNA damage checkpoint(GO:0031571)
0.1	0.3	GO:0099563	modification of synaptic structure(GO:0099563)
0.1	0.3	GO:0070973	protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1	0.2	GO:0045002	double-strand break repair via single-strand annealing(GO:0045002)
0.1	0.7	GO:0009313	oligosaccharide catabolic process(GO:0009313)
0.1	0.4	GO:0017187	peptidyl-glutamic acid carboxylation(GO:0017187) protein carboxylation(GO:0018214)
0.1	0.5	GO:0044030	regulation of DNA methylation(GO:0044030)
0.1	0.3	GO:0034498	early endosome to Golgi transport(GO:0034498)
0.1	0.3	GO:0071596	ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1	0.3	GO:0006691	leukotriene metabolic process(GO:0006691) leukotriene biosynthetic process(GO:0019370)
0.1	0.3	GO:0060049	regulation of protein glycosylation(GO:0060049)
0.1	0.2	GO:0014814	regulation of synaptic growth at neuromuscular junction(GO:0008582) axon regeneration at neuromuscular junction(GO:0014814) positive regulation of synaptic growth at neuromuscular junction(GO:0045887)
0.1	0.5	GO:0051315	attachment of mitotic spindle microtubules to kinetochore(GO:0051315)
0.1	0.3	GO:1902019	regulation of cilium movement involved in cell motility(GO:0060295) regulation of cilium beat frequency involved in ciliary motility(GO:0060296) regulation of cilium-dependent cell motility(GO:1902019)
0.1	0.5	GO:0071816	tail-anchored membrane protein insertion into ER membrane(GO:0071816)
0.1	0.2	GO:0048569	post-embryonic organ development(GO:0048569)
0.0	0.2	GO:2000096	positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096)
0.0	0.4	GO:0006895	Golgi to endosome transport(GO:0006895)
0.0	0.2	GO:0003096	renal sodium ion transport(GO:0003096) renal sodium ion absorption(GO:0070294)
0.0	0.4	GO:0061484	hematopoietic stem cell homeostasis(GO:0061484)
0.0	0.1	GO:0015884	folic acid transport(GO:0015884) drug transport(GO:0015893) methotrexate transport(GO:0051958) reduced folate transmembrane transport(GO:0098838)
0.0	0.2	GO:0000741	karyogamy(GO:0000741) pronuclear fusion(GO:0007344)
0.0	0.3	GO:0060294	cilium movement involved in cell motility(GO:0060294)
0.0	0.5	GO:0006646	phosphatidylethanolamine biosynthetic process(GO:0006646)
0.0	0.6	GO:0006363	termination of RNA polymerase I transcription(GO:0006363)
0.0	0.3	GO:0033314	mitotic DNA replication checkpoint(GO:0033314)
0.0	0.1	GO:0052576	carbohydrate localization(GO:0052575) carbohydrate storage(GO:0052576)
0.0	0.2	GO:0034312	diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0	1.5	GO:0000266	mitochondrial fission(GO:0000266)
0.0	1.3	GO:0007340	acrosome reaction(GO:0007340)
0.0	0.7	GO:0051445	regulation of meiotic cell cycle(GO:0051445)
0.0	1.2	GO:0035305	negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.0	0.8	GO:0031397	negative regulation of protein ubiquitination(GO:0031397)
0.0	0.2	GO:0055107	Golgi to secretory granule transport(GO:0055107)
0.0	0.1	GO:0007414	axonal defasciculation(GO:0007414)
0.0	0.1	GO:0030858	positive regulation of epithelial cell differentiation(GO:0030858) regulation of endothelial cell differentiation(GO:0045601)
0.0	1.2	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0	0.1	GO:0019323	pentose catabolic process(GO:0019323)
0.0	0.6	GO:0008156	negative regulation of DNA replication(GO:0008156)
0.0	0.6	GO:0003181	atrioventricular valve morphogenesis(GO:0003181)
0.0	0.6	GO:0032467	positive regulation of cytokinesis(GO:0032467)
0.0	0.3	GO:0018026	peptidyl-lysine monomethylation(GO:0018026)
0.0	0.5	GO:0035336	long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0	0.1	GO:1990403	embryonic brain development(GO:1990403)
0.0	0.5	GO:0046501	protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0	1.1	GO:0097202	activation of cysteine-type endopeptidase activity(GO:0097202)
0.0	0.1	GO:0045429	regulation of nitric oxide biosynthetic process(GO:0045428) positive regulation of nitric oxide biosynthetic process(GO:0045429) positive regulation of reactive oxygen species biosynthetic process(GO:1903428) positive regulation of nitric oxide metabolic process(GO:1904407)
0.0	0.2	GO:0006660	phosphatidylserine catabolic process(GO:0006660) monoacylglycerol metabolic process(GO:0046462) monoacylglycerol catabolic process(GO:0052651)
0.0	0.1	GO:0048211	Golgi vesicle docking(GO:0048211)
0.0	0.2	GO:0060017	parathyroid gland development(GO:0060017)
0.0	0.1	GO:0015871	choline transport(GO:0015871)
0.0	0.2	GO:1990108	protein linear deubiquitination(GO:1990108)
0.0	0.2	GO:0060420	regulation of heart growth(GO:0060420)
0.0	1.7	GO:0021515	cell differentiation in spinal cord(GO:0021515)
0.0	0.6	GO:0060351	cartilage development involved in endochondral bone morphogenesis(GO:0060351)
0.0	0.2	GO:0097341	inhibition of cysteine-type endopeptidase activity(GO:0097340) zymogen inhibition(GO:0097341)
0.0	0.4	GO:0051382	kinetochore assembly(GO:0051382) kinetochore organization(GO:0051383)
0.0	0.3	GO:0050957	equilibrioception(GO:0050957)
0.0	0.1	GO:0045040	outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0	0.1	GO:0097355	protein localization to heterochromatin(GO:0097355)
0.0	0.1	GO:0060092	regulation of synaptic transmission, glycinergic(GO:0060092)
0.0	0.6	GO:0035435	phosphate ion transmembrane transport(GO:0035435)
0.0	1.4	GO:0046513	ceramide biosynthetic process(GO:0046513)
0.0	0.2	GO:0060149	negative regulation of posttranscriptional gene silencing(GO:0060149) negative regulation of gene silencing by miRNA(GO:0060965) negative regulation of gene silencing by RNA(GO:0060967) 3'-UTR-mediated mRNA stabilization(GO:0070935)
0.0	0.6	GO:0051639	actin filament network formation(GO:0051639)
0.0	0.2	GO:0044528	regulation of mitochondrial mRNA stability(GO:0044528)
0.0	0.2	GO:0035677	posterior lateral line neuromast hair cell development(GO:0035677)
0.0	0.9	GO:0051209	release of sequestered calcium ion into cytosol(GO:0051209)
0.0	0.5	GO:0033138	positive regulation of peptidyl-serine phosphorylation(GO:0033138)
0.0	0.4	GO:0035459	cargo loading into vesicle(GO:0035459)
0.0	0.5	GO:0019471	peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471)
0.0	0.2	GO:2000650	negative regulation of sodium ion transmembrane transporter activity(GO:2000650)
0.0	0.1	GO:1901522	positive regulation of transcription from RNA polymerase II promoter in response to calcium ion(GO:0061400) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.0	0.2	GO:0070979	protein K11-linked ubiquitination(GO:0070979)
0.0	0.7	GO:0036297	interstrand cross-link repair(GO:0036297)
0.0	0.1	GO:0072512	ferric iron transport(GO:0015682) transferrin transport(GO:0033572) trivalent inorganic cation transport(GO:0072512)
0.0	0.1	GO:0044209	AMP salvage(GO:0044209)
0.0	0.1	GO:0050748	N-terminal protein palmitoylation(GO:0006500) negative regulation of lipoprotein metabolic process(GO:0050748) regulation of N-terminal protein palmitoylation(GO:0060254) negative regulation of N-terminal protein palmitoylation(GO:0060262) negative regulation of protein lipidation(GO:1903060)
0.0	0.2	GO:0021702	cerebellar Purkinje cell layer formation(GO:0021694) cerebellar Purkinje cell differentiation(GO:0021702)
0.0	0.2	GO:0016926	protein desumoylation(GO:0016926)
0.0	0.7	GO:0007050	cell cycle arrest(GO:0007050)
0.0	0.1	GO:0016045	detection of biotic stimulus(GO:0009595) detection of bacterium(GO:0016045) detection of other organism(GO:0098543) detection of external biotic stimulus(GO:0098581)
0.0	0.5	GO:0006446	regulation of translational initiation(GO:0006446)
0.0	0.1	GO:0036268	swimming(GO:0036268)
0.0	0.1	GO:0000729	DNA double-strand break processing(GO:0000729)
0.0	0.2	GO:0006622	protein targeting to lysosome(GO:0006622)
0.0	0.1	GO:0006359	regulation of transcription from RNA polymerase III promoter(GO:0006359)
0.0	0.1	GO:1902975	cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.0	0.0	GO:0097378	interneuron axon guidance(GO:0097376) spinal cord interneuron axon guidance(GO:0097377) dorsal spinal cord interneuron axon guidance(GO:0097378)
0.0	0.1	GO:0042723	thiamine metabolic process(GO:0006772) thiamine-containing compound metabolic process(GO:0042723)
0.0	0.2	GO:0009303	rRNA transcription(GO:0009303) swim bladder maturation(GO:0048796) swim bladder inflation(GO:0048798)
0.0	0.4	GO:1901888	regulation of cell junction assembly(GO:1901888)
0.0	0.2	GO:0070212	protein poly-ADP-ribosylation(GO:0070212)
0.0	0.3	GO:0045471	response to ethanol(GO:0045471)
0.0	0.1	GO:0021960	anterior commissure morphogenesis(GO:0021960)
0.0	0.1	GO:0009312	oligosaccharide biosynthetic process(GO:0009312)
0.0	0.2	GO:0098900	regulation of action potential(GO:0098900)
0.0	0.1	GO:0045901	positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.0	0.5	GO:0038061	NIK/NF-kappaB signaling(GO:0038061)
0.0	0.3	GO:0021551	central nervous system morphogenesis(GO:0021551)
0.0	0.1	GO:0060847	cell proliferation in dorsal spinal cord(GO:0010456) endothelial cell fate specification(GO:0060847)
0.0	0.0	GO:0099551	synaptic signaling via neuropeptide(GO:0099538) trans-synaptic signaling by neuropeptide(GO:0099540) trans-synaptic signaling by neuropeptide, modulating synaptic transmission(GO:0099551) cellular response to brain-derived neurotrophic factor stimulus(GO:1990416)
0.0	0.1	GO:0051443	regulation of ubiquitin-protein transferase activity(GO:0051438) positive regulation of ubiquitin-protein transferase activity(GO:0051443)
0.0	0.1	GO:0060282	positive regulation of oocyte development(GO:0060282)
0.0	0.7	GO:0018298	protein-chromophore linkage(GO:0018298)
0.0	0.1	GO:0051645	Golgi localization(GO:0051645)
0.0	0.3	GO:0032233	positive regulation of actin filament bundle assembly(GO:0032233)
0.0	0.6	GO:0030968	endoplasmic reticulum unfolded protein response(GO:0030968)
0.0	0.1	GO:0048260	positive regulation of receptor-mediated endocytosis(GO:0048260) protein localization to early endosome(GO:1902946)
0.0	0.2	GO:0043687	post-translational protein modification(GO:0043687)
0.0	0.4	GO:0035329	hippo signaling(GO:0035329)
0.0	0.4	GO:0051781	positive regulation of cell division(GO:0051781)
0.0	0.1	GO:1902262	apoptotic process involved in patterning of blood vessels(GO:1902262)
0.0	0.2	GO:0032418	lysosome localization(GO:0032418)
0.0	0.3	GO:0001736	establishment of planar polarity(GO:0001736) establishment of tissue polarity(GO:0007164)
0.0	1.4	GO:0016579	protein deubiquitination(GO:0016579)
0.0	0.0	GO:0042364	water-soluble vitamin biosynthetic process(GO:0042364)
0.0	0.1	GO:0033278	cell proliferation in midbrain(GO:0033278)
0.0	0.1	GO:2001271	negative regulation of execution phase of apoptosis(GO:1900118) regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:2001270) negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:2001271)
0.0	0.1	GO:0010867	regulation of triglyceride biosynthetic process(GO:0010866) positive regulation of triglyceride biosynthetic process(GO:0010867)
0.0	0.7	GO:0031122	cytoplasmic microtubule organization(GO:0031122)
0.0	0.1	GO:0060231	mesenchymal to epithelial transition(GO:0060231)
0.0	0.7	GO:0046856	phosphatidylinositol dephosphorylation(GO:0046856)
0.0	0.1	GO:0014066	regulation of phosphatidylinositol 3-kinase signaling(GO:0014066)
0.0	0.0	GO:0015677	copper ion import(GO:0015677)
0.0	0.8	GO:0007098	centrosome cycle(GO:0007098)
0.0	0.1	GO:0035721	intraciliary retrograde transport(GO:0035721)
0.0	0.0	GO:1903318	negative regulation of protein processing(GO:0010955) negative regulation of protein maturation(GO:1903318)
0.0	0.2	GO:0006278	RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.0	0.2	GO:0007020	microtubule nucleation(GO:0007020)
0.0	0.2	GO:0045773	positive regulation of axon extension(GO:0045773)
0.0	1.0	GO:0034249	negative regulation of translation(GO:0017148) negative regulation of cellular amide metabolic process(GO:0034249)
0.0	0.6	GO:0043044	ATP-dependent chromatin remodeling(GO:0043044)
0.0	0.2	GO:0036092	phosphatidylinositol-3-phosphate biosynthetic process(GO:0036092)
0.0	0.1	GO:0060038	cardiac muscle cell proliferation(GO:0060038)
0.0	0.3	GO:0043967	histone H4 acetylation(GO:0043967)
0.0	0.3	GO:0097352	autophagosome maturation(GO:0097352)
0.0	0.4	GO:0031102	neuron projection regeneration(GO:0031102)
0.0	5.6	GO:0051603	proteolysis involved in cellular protein catabolic process(GO:0051603)
0.0	0.1	GO:0061072	iris morphogenesis(GO:0061072)
0.0	0.2	GO:0051568	histone H3-K4 methylation(GO:0051568)
0.0	0.2	GO:0010883	regulation of lipid storage(GO:0010883)
0.0	0.5	GO:0051016	barbed-end actin filament capping(GO:0051016)
0.0	0.7	GO:0016331	morphogenesis of embryonic epithelium(GO:0016331)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	1.3	GO:0098553	integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553)
0.3	2.3	GO:0005662	DNA replication factor A complex(GO:0005662)
0.2	0.8	GO:0043625	delta DNA polymerase complex(GO:0043625)
0.1	0.9	GO:0005790	smooth endoplasmic reticulum(GO:0005790)
0.1	0.5	GO:1990498	mitotic spindle microtubule(GO:1990498)
0.1	0.5	GO:0070724	BMP receptor complex(GO:0070724)
0.1	0.4	GO:0032299	ribonuclease H2 complex(GO:0032299)
0.1	0.6	GO:0000506	glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex(GO:0000506)
0.1	0.3	GO:0061689	tricellular tight junction(GO:0061689)
0.1	0.5	GO:0071818	BAT3 complex(GO:0071818)
0.1	0.2	GO:0031166	integral component of vacuolar membrane(GO:0031166) intrinsic component of vacuolar membrane(GO:0031310)
0.1	0.8	GO:0030669	clathrin coat of endocytic vesicle(GO:0030128) clathrin-coated endocytic vesicle membrane(GO:0030669)
0.1	1.8	GO:0030140	trans-Golgi network transport vesicle(GO:0030140)
0.1	0.3	GO:0070209	ASTRA complex(GO:0070209)
0.1	0.2	GO:0072379	ER membrane insertion complex(GO:0072379) TRC complex(GO:0072380)
0.1	0.9	GO:1990124	messenger ribonucleoprotein complex(GO:1990124)
0.1	0.5	GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex(GO:0005671)
0.1	0.3	GO:1990513	CLOCK-BMAL transcription complex(GO:1990513)
0.1	0.4	GO:0035060	brahma complex(GO:0035060)
0.1	1.2	GO:0060170	ciliary membrane(GO:0060170)
0.0	0.5	GO:0043240	Fanconi anaemia nuclear complex(GO:0043240)
0.0	0.2	GO:0097255	R2TP complex(GO:0097255)
0.0	1.2	GO:0035371	microtubule plus-end(GO:0035371)
0.0	0.5	GO:0016602	CCAAT-binding factor complex(GO:0016602)
0.0	0.5	GO:0031080	nuclear pore outer ring(GO:0031080)
0.0	1.4	GO:0043186	P granule(GO:0043186)
0.0	0.1	GO:0005828	kinetochore microtubule(GO:0005828)
0.0	0.5	GO:0008250	oligosaccharyltransferase complex(GO:0008250)
0.0	0.3	GO:0044232	organelle membrane contact site(GO:0044232)
0.0	0.3	GO:0070652	HAUS complex(GO:0070652)
0.0	0.1	GO:0097189	apoptotic body(GO:0097189)
0.0	0.3	GO:0071797	LUBAC complex(GO:0071797)
0.0	0.3	GO:0097648	G-protein coupled receptor dimeric complex(GO:0038037) G-protein coupled receptor heterodimeric complex(GO:0038039) G-protein coupled receptor complex(GO:0097648)
0.0	2.2	GO:0030139	endocytic vesicle(GO:0030139)
0.0	0.7	GO:0030057	desmosome(GO:0030057)
0.0	1.8	GO:0016592	mediator complex(GO:0016592)
0.0	0.3	GO:0030904	retromer complex(GO:0030904)
0.0	0.4	GO:0071564	npBAF complex(GO:0071564)
0.0	1.4	GO:0032587	ruffle membrane(GO:0032587)
0.0	0.5	GO:0000792	heterochromatin(GO:0000792)
0.0	0.8	GO:0005680	anaphase-promoting complex(GO:0005680)
0.0	0.8	GO:0097610	cleavage furrow(GO:0032154) cell surface furrow(GO:0097610)
0.0	0.1	GO:0070319	Golgi to plasma membrane transport vesicle(GO:0070319)
0.0	0.5	GO:0016282	eukaryotic 43S preinitiation complex(GO:0016282)
0.0	0.2	GO:0033588	Elongator holoenzyme complex(GO:0033588)
0.0	0.6	GO:0031463	Cul3-RING ubiquitin ligase complex(GO:0031463)
0.0	0.3	GO:0045180	basal cortex(GO:0045180)
0.0	0.4	GO:0034992	microtubule organizing center attachment site(GO:0034992) LINC complex(GO:0034993)
0.0	0.5	GO:0046540	U4/U6 x U5 tri-snRNP complex(GO:0046540)
0.0	0.7	GO:0001750	photoreceptor outer segment(GO:0001750)
0.0	0.1	GO:0030892	nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.0	2.1	GO:0005923	bicellular tight junction(GO:0005923) occluding junction(GO:0070160)
0.0	0.3	GO:0044665	MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)
0.0	1.8	GO:0005795	Golgi stack(GO:0005795)
0.0	0.3	GO:0031312	extrinsic component of organelle membrane(GO:0031312)
0.0	0.4	GO:0070971	endoplasmic reticulum exit site(GO:0070971)
0.0	0.3	GO:0097038	perinuclear endoplasmic reticulum(GO:0097038)
0.0	0.1	GO:0005879	axonemal microtubule(GO:0005879)
0.0	0.4	GO:0046658	anchored component of plasma membrane(GO:0046658)
0.0	0.2	GO:0044224	juxtaparanode region of axon(GO:0044224)
0.0	0.2	GO:0016580	Sin3 complex(GO:0016580)
0.0	3.9	GO:0005764	lysosome(GO:0005764)
0.0	0.1	GO:0000124	SAGA complex(GO:0000124)
0.0	1.7	GO:0016607	nuclear speck(GO:0016607)
0.0	0.7	GO:0016342	catenin complex(GO:0016342)
0.0	0.1	GO:0043034	costamere(GO:0043034)
0.0	0.1	GO:0030914	STAGA complex(GO:0030914)
0.0	0.1	GO:0030991	intraciliary transport particle A(GO:0030991)
0.0	0.1	GO:0071595	Nem1-Spo7 phosphatase complex(GO:0071595)
0.0	0.1	GO:1902636	kinociliary basal body(GO:1902636)
0.0	0.9	GO:0030173	integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0	1.3	GO:0005882	intermediate filament(GO:0005882)
0.0	0.2	GO:0097546	ciliary base(GO:0097546)
0.0	0.1	GO:0032300	mismatch repair complex(GO:0032300)
0.0	0.3	GO:0035861	site of double-strand break(GO:0035861)
0.0	1.3	GO:0005925	cell-substrate adherens junction(GO:0005924) focal adhesion(GO:0005925)
0.0	0.4	GO:0005657	replication fork(GO:0005657)
0.0	0.1	GO:0001401	mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0	0.9	GO:0019005	SCF ubiquitin ligase complex(GO:0019005)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.8	GO:0097108	hedgehog family protein binding(GO:0097108)
0.2	2.3	GO:0047676	arachidonate-CoA ligase activity(GO:0047676)
0.2	0.5	GO:0016748	succinyltransferase activity(GO:0016748)
0.2	0.9	GO:0005219	ryanodine-sensitive calcium-release channel activity(GO:0005219) calcium-induced calcium release activity(GO:0048763)
0.2	0.9	GO:0042809	vitamin D receptor binding(GO:0042809)
0.2	1.3	GO:0042500	aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.2	1.1	GO:0004517	nitric-oxide synthase activity(GO:0004517)
0.1	1.4	GO:0017091	AU-rich element binding(GO:0017091) mRNA 3'-UTR AU-rich region binding(GO:0035925)
0.1	0.6	GO:0009374	biotin binding(GO:0009374)
0.1	1.2	GO:0004865	protein serine/threonine phosphatase inhibitor activity(GO:0004865)
0.1	0.4	GO:0016509	long-chain-3-hydroxyacyl-CoA dehydrogenase activity(GO:0016509)
0.1	0.4	GO:1990226	histone methyltransferase binding(GO:1990226)
0.1	0.8	GO:0070579	methylcytosine dioxygenase activity(GO:0070579)
0.1	1.6	GO:0004169	dolichyl-phosphate-mannose-protein mannosyltransferase activity(GO:0004169)
0.1	1.0	GO:0005161	platelet-derived growth factor receptor binding(GO:0005161)
0.1	0.3	GO:0070259	tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1	0.6	GO:0060182	apelin receptor activity(GO:0060182)
0.1	0.8	GO:0015189	L-lysine transmembrane transporter activity(GO:0015189)
0.1	0.5	GO:0004307	diacylglycerol cholinephosphotransferase activity(GO:0004142) ethanolaminephosphotransferase activity(GO:0004307)
0.1	0.5	GO:0098634	C-X3-C chemokine binding(GO:0019960) protein binding involved in cell-matrix adhesion(GO:0098634) collagen binding involved in cell-matrix adhesion(GO:0098639)
0.1	0.5	GO:0043139	5'-3' DNA helicase activity(GO:0043139)
0.1	1.6	GO:0008449	N-acetylglucosamine-6-sulfatase activity(GO:0008449)
0.1	0.4	GO:0008488	gamma-glutamyl carboxylase activity(GO:0008488)
0.1	0.6	GO:0017176	phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.1	0.6	GO:0019136	deoxynucleoside kinase activity(GO:0019136)
0.1	1.2	GO:0050291	sphingosine N-acyltransferase activity(GO:0050291)
0.1	1.2	GO:0038191	neuropilin binding(GO:0038191)
0.1	1.2	GO:0000340	RNA 7-methylguanosine cap binding(GO:0000340)
0.1	0.1	GO:0010521	telomerase inhibitor activity(GO:0010521)
0.1	0.2	GO:0019777	Atg12 transferase activity(GO:0019777)
0.1	0.5	GO:0004962	endothelin receptor activity(GO:0004962)
0.1	0.2	GO:0070738	protein-glycine ligase activity(GO:0070735) tubulin-glycine ligase activity(GO:0070738)
0.1	0.8	GO:0008296	3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.1	0.5	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.1	0.7	GO:0052794	exo-alpha-(2->3)-sialidase activity(GO:0052794) exo-alpha-(2->6)-sialidase activity(GO:0052795) exo-alpha-(2->8)-sialidase activity(GO:0052796)
0.1	0.7	GO:0052629	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1	0.3	GO:0047757	chondroitin-glucuronate 5-epimerase activity(GO:0047757)
0.1	0.8	GO:0003886	DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1	1.7	GO:0030247	pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.1	0.3	GO:0004534	5'-3' exoribonuclease activity(GO:0004534)
0.1	0.2	GO:0070336	flap-structured DNA binding(GO:0070336)
0.1	0.4	GO:0004523	RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.1	0.2	GO:0004576	oligosaccharyl transferase activity(GO:0004576) dolichyl-diphosphooligosaccharide-protein glycotransferase activity(GO:0004579)
0.1	0.2	GO:0004113	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.1	0.2	GO:0008179	adenylate cyclase binding(GO:0008179)
0.1	0.5	GO:0043515	kinetochore binding(GO:0043515)
0.1	0.6	GO:0035804	structural constituent of egg coat(GO:0035804)
0.1	1.9	GO:0004435	phosphatidylinositol phospholipase C activity(GO:0004435) phospholipase C activity(GO:0004629)
0.0	0.5	GO:0043325	phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.0	1.1	GO:0005003	ephrin receptor activity(GO:0005003)
0.0	0.3	GO:1990380	Lys48-specific deubiquitinase activity(GO:1990380)
0.0	0.4	GO:0072518	Rho-dependent protein serine/threonine kinase activity(GO:0072518)
0.0	0.4	GO:0001217	bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding(GO:0001217)
0.0	0.2	GO:0008046	axon guidance receptor activity(GO:0008046)
0.0	0.5	GO:0005025	transforming growth factor beta receptor activity, type I(GO:0005025)
0.0	0.2	GO:0043531	ADP binding(GO:0043531)
0.0	0.1	GO:0015350	reduced folate carrier activity(GO:0008518) methotrexate transporter activity(GO:0015350)
0.0	1.4	GO:0051010	microtubule plus-end binding(GO:0051010)
0.0	0.5	GO:0015186	L-glutamine transmembrane transporter activity(GO:0015186)
0.0	0.3	GO:0070888	E-box binding(GO:0070888)
0.0	0.3	GO:0034450	ubiquitin-ubiquitin ligase activity(GO:0034450)
0.0	0.7	GO:0003785	actin monomer binding(GO:0003785)
0.0	0.5	GO:0070628	proteasome binding(GO:0070628)
0.0	5.9	GO:0004197	cysteine-type endopeptidase activity(GO:0004197)
0.0	1.0	GO:0008171	O-methyltransferase activity(GO:0008171)
0.0	0.3	GO:0004965	G-protein coupled GABA receptor activity(GO:0004965)
0.0	0.3	GO:0051373	telethonin binding(GO:0031433) FATZ binding(GO:0051373)
0.0	0.5	GO:0005315	inorganic phosphate transmembrane transporter activity(GO:0005315)
0.0	0.4	GO:0001102	RNA polymerase II activating transcription factor binding(GO:0001102)
0.0	0.1	GO:0015220	choline transmembrane transporter activity(GO:0015220)
0.0	0.4	GO:0005021	vascular endothelial growth factor-activated receptor activity(GO:0005021)
0.0	0.3	GO:0000048	peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.0	0.2	GO:0016929	SUMO-specific protease activity(GO:0016929)
0.0	0.6	GO:0035497	cAMP response element binding(GO:0035497)
0.0	0.2	GO:0010859	calcium-dependent cysteine-type endopeptidase inhibitor activity(GO:0010859)
0.0	0.5	GO:0003688	DNA replication origin binding(GO:0003688)
0.0	0.2	GO:0017040	ceramidase activity(GO:0017040)
0.0	0.1	GO:0050333	thiamin-triphosphatase activity(GO:0050333)
0.0	1.5	GO:0003697	single-stranded DNA binding(GO:0003697)
0.0	0.4	GO:0061608	nuclear import signal receptor activity(GO:0061608)
0.0	0.1	GO:0042609	CD4 receptor binding(GO:0042609)
0.0	0.1	GO:0004001	adenosine kinase activity(GO:0004001)
0.0	0.1	GO:0008184	phosphorylase activity(GO:0004645) glycogen phosphorylase activity(GO:0008184)
0.0	0.5	GO:0031545	peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0	0.2	GO:0019871	sodium channel inhibitor activity(GO:0019871)
0.0	0.9	GO:0003684	damaged DNA binding(GO:0003684)
0.0	0.5	GO:0042800	histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0	0.1	GO:0004998	transferrin receptor activity(GO:0004998)
0.0	1.4	GO:0008094	DNA-dependent ATPase activity(GO:0008094)
0.0	4.2	GO:0042393	histone binding(GO:0042393)
0.0	0.2	GO:0008494	translation activator activity(GO:0008494)
0.0	2.0	GO:0045296	cadherin binding(GO:0045296)
0.0	0.1	GO:0080122	coenzyme A transmembrane transporter activity(GO:0015228) adenosine 3',5'-bisphosphate transmembrane transporter activity(GO:0071077) AMP transmembrane transporter activity(GO:0080122)
0.0	0.4	GO:0015026	coreceptor activity(GO:0015026)
0.0	0.1	GO:0016019	peptidoglycan receptor activity(GO:0016019)
0.0	0.1	GO:0030942	endoplasmic reticulum signal peptide binding(GO:0030942)
0.0	0.1	GO:0047192	1-alkylglycerophosphocholine O-acetyltransferase activity(GO:0047192)
0.0	0.1	GO:0008440	inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440)
0.0	0.9	GO:0008376	acetylgalactosaminyltransferase activity(GO:0008376)
0.0	1.6	GO:0003724	RNA helicase activity(GO:0003724)
0.0	0.1	GO:0015140	thiosulfate transmembrane transporter activity(GO:0015117) oxaloacetate transmembrane transporter activity(GO:0015131) malate transmembrane transporter activity(GO:0015140)
0.0	0.1	GO:0030983	mismatched DNA binding(GO:0030983)
0.0	1.1	GO:0003727	single-stranded RNA binding(GO:0003727)
0.0	0.2	GO:0046934	phosphatidylinositol-4,5-bisphosphate 3-kinase activity(GO:0046934) phosphatidylinositol-3,4-bisphosphate 5-kinase activity(GO:0052812)
0.0	0.1	GO:0004430	1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0	0.2	GO:0004711	ribosomal protein S6 kinase activity(GO:0004711)
0.0	0.6	GO:0004864	protein phosphatase inhibitor activity(GO:0004864)
0.0	0.2	GO:1990404	protein ADP-ribosylase activity(GO:1990404)
0.0	0.1	GO:0015369	calcium:proton antiporter activity(GO:0015369) metal ion:proton antiporter activity(GO:0051139)
0.0	1.2	GO:0031625	ubiquitin protein ligase binding(GO:0031625)
0.0	1.5	GO:0101005	thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459) ubiquitinyl hydrolase activity(GO:0101005)
0.0	0.0	GO:0060175	brain-derived neurotrophic factor binding(GO:0048403) brain-derived neurotrophic factor-activated receptor activity(GO:0060175)
0.0	0.3	GO:0070003	threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.0	0.0	GO:0080132	fatty acid alpha-hydroxylase activity(GO:0080132)
0.0	0.3	GO:0042162	telomeric DNA binding(GO:0042162)
0.0	1.1	GO:0004715	non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.0	0.2	GO:0019869	chloride channel inhibitor activity(GO:0019869) potassium channel inhibitor activity(GO:0019870)
0.0	0.2	GO:0061665	SUMO ligase activity(GO:0061665)
0.0	0.1	GO:0015924	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571) mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.0	0.1	GO:0004449	isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0	0.2	GO:0047372	acylglycerol lipase activity(GO:0047372)
0.0	0.1	GO:0047498	calcium-dependent phospholipase A2 activity(GO:0047498)
0.0	0.3	GO:0017056	structural constituent of nuclear pore(GO:0017056)
0.0	0.1	GO:0043023	ribosomal large subunit binding(GO:0043023)
0.0	0.3	GO:0017134	fibroblast growth factor binding(GO:0017134)
0.0	0.0	GO:0008823	cupric reductase activity(GO:0008823) ferric-chelate reductase (NADPH) activity(GO:0052851)
0.0	0.5	GO:0042826	histone deacetylase binding(GO:0042826)
0.0	0.2	GO:0035615	clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0	0.9	GO:0003743	translation initiation factor activity(GO:0003743)
0.0	0.1	GO:0033188	sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	2.6	ST GA13 PATHWAY	G alpha 13 Pathway
0.1	2.6	PID CASPASE PATHWAY	Caspase cascade in apoptosis
0.1	3.1	PID NOTCH PATHWAY	Notch signaling pathway
0.0	1.7	PID AJDISS 2PATHWAY	Posttranslational regulation of adherens junction stability and dissassembly
0.0	0.8	PID HEDGEHOG 2PATHWAY	Signaling events mediated by the Hedgehog family
0.0	1.4	PID FOXM1 PATHWAY	FOXM1 transcription factor network
0.0	0.8	PID P38 MKK3 6PATHWAY	p38 MAPK signaling pathway
0.0	0.1	SA PROGRAMMED CELL DEATH	Programmed cell death, or apoptosis, eliminates damaged or unneeded cells.
0.0	0.9	PID CDC42 REG PATHWAY	Regulation of CDC42 activity
0.0	0.7	PID AURORA B PATHWAY	Aurora B signaling
0.0	0.3	PID LPA4 PATHWAY	LPA4-mediated signaling events
0.0	0.3	PID ARF 3PATHWAY	Arf1 pathway
0.0	0.2	PID RANBP2 PATHWAY	Sumoylation by RanBP2 regulates transcriptional repression
0.0	0.2	SA TRKA RECEPTOR	The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth.
0.0	0.2	PID INTEGRIN A9B1 PATHWAY	Alpha9 beta1 integrin signaling events
0.0	0.6	PID TELOMERASE PATHWAY	Regulation of Telomerase
0.0	0.4	PID BMP PATHWAY	BMP receptor signaling
0.0	0.3	PID MYC PATHWAY	C-MYC pathway
0.0	0.8	PID E2F PATHWAY	E2F transcription factor network
0.0	0.4	PID HNF3A PATHWAY	FOXA1 transcription factor network
0.0	0.5	PID P73PATHWAY	p73 transcription factor network
0.0	0.2	PID WNT NONCANONICAL PATHWAY	Noncanonical Wnt signaling pathway
0.0	0.4	PID CMYB PATHWAY	C-MYB transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	2.5	REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS	Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus
0.1	2.4	REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS	Genes involved in Apoptotic cleavage of cellular proteins
0.1	1.6	REACTOME BASE EXCISION REPAIR	Genes involved in Base Excision Repair
0.1	1.1	REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS	Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis
0.1	1.0	REACTOME ASSOCIATION OF LICENSING FACTORS WITH THE PRE REPLICATIVE COMPLEX	Genes involved in Association of licensing factors with the pre-replicative complex
0.0	1.2	REACTOME RNA POL I TRANSCRIPTION INITIATION	Genes involved in RNA Polymerase I Transcription Initiation
0.0	0.7	REACTOME GRB2 SOS PROVIDES LINKAGE TO MAPK SIGNALING FOR INTERGRINS	Genes involved in GRB2:SOS provides linkage to MAPK signaling for Intergrins
0.0	0.4	REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS	Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins
0.0	0.8	REACTOME CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE	Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase
0.0	0.5	REACTOME METABOLISM OF PORPHYRINS	Genes involved in Metabolism of porphyrins
0.0	0.8	REACTOME ADHERENS JUNCTIONS INTERACTIONS	Genes involved in Adherens junctions interactions
0.0	0.4	REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1	Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1
0.0	0.7	REACTOME KINESINS	Genes involved in Kinesins
0.0	2.1	REACTOME MITOTIC PROMETAPHASE	Genes involved in Mitotic Prometaphase
0.0	0.3	REACTOME SYNTHESIS OF PIPS AT THE LATE ENDOSOME MEMBRANE	Genes involved in Synthesis of PIPs at the late endosome membrane
0.0	0.2	REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS	Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis
0.0	0.3	REACTOME NEPHRIN INTERACTIONS	Genes involved in Nephrin interactions
0.0	0.3	REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY	Genes involved in Adenylate cyclase activating pathway
0.0	0.4	REACTOME SYNTHESIS OF PC	Genes involved in Synthesis of PC
0.0	0.9	REACTOME GLYCOSPHINGOLIPID METABOLISM	Genes involved in Glycosphingolipid metabolism
0.0	0.6	REACTOME SIGNALING BY FGFR1 FUSION MUTANTS	Genes involved in Signaling by FGFR1 fusion mutants
0.0	0.4	REACTOME DESTABILIZATION OF MRNA BY KSRP	Genes involved in Destabilization of mRNA by KSRP
0.0	0.5	REACTOME PEROXISOMAL LIPID METABOLISM	Genes involved in Peroxisomal lipid metabolism
0.0	0.2	REACTOME INTRINSIC PATHWAY FOR APOPTOSIS	Genes involved in Intrinsic Pathway for Apoptosis
0.0	0.5	REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE	Genes involved in Amino acid transport across the plasma membrane
0.0	0.2	REACTOME RETROGRADE NEUROTROPHIN SIGNALLING	Genes involved in Retrograde neurotrophin signalling
0.0	0.2	REACTOME SIGNALING BY NODAL	Genes involved in Signaling by NODAL
0.0	0.4	REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION	Genes involved in Pre-NOTCH Transcription and Translation
0.0	0.4	REACTOME MEIOTIC SYNAPSIS	Genes involved in Meiotic Synapsis
0.0	0.3	REACTOME HS GAG DEGRADATION	Genes involved in HS-GAG degradation
0.0	1.8	REACTOME SIGNALING BY RHO GTPASES	Genes involved in Signaling by Rho GTPases
0.0	0.2	REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE	Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere
0.0	0.3	REACTOME PYRIMIDINE METABOLISM	Genes involved in Pyrimidine metabolism
0.0	0.4	REACTOME CHONDROITIN SULFATE DERMATAN SULFATE METABOLISM	Genes involved in Chondroitin sulfate/dermatan sulfate metabolism
0.0	0.4	REACTOME SPHINGOLIPID METABOLISM	Genes involved in Sphingolipid metabolism
0.0	0.3	REACTOME DOUBLE STRAND BREAK REPAIR	Genes involved in Double-Strand Break Repair
0.0	0.1	REACTOME PTM GAMMA CARBOXYLATION HYPUSINE FORMATION AND ARYLSULFATASE ACTIVATION	Genes involved in PTM: gamma carboxylation, hypusine formation and arylsulfatase activation
0.0	0.3	REACTOME NETRIN1 SIGNALING	Genes involved in Netrin-1 signaling
0.0	0.2	REACTOME SIGNALING BY HIPPO	Genes involved in Signaling by Hippo
0.0	0.1	REACTOME IRAK2 MEDIATED ACTIVATION OF TAK1 COMPLEX UPON TLR7 8 OR 9 STIMULATION	Genes involved in IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation
0.0	0.3	REACTOME MEIOSIS	Genes involved in Meiosis
0.0	0.2	REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI	Genes involved in Synthesis of glycosylphosphatidylinositol (GPI)
0.0	0.1	REACTOME ACTIVATION OF CHAPERONES BY ATF6 ALPHA	Genes involved in Activation of Chaperones by ATF6-alpha
0.0	0.2	REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY	Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity