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PRJEB1986: zebrafish developmental stages transcriptome

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Results for msc

Z-value: 0.52

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Transcription factors associated with msc

Gene Symbol Gene ID Gene Info
ENSDARG00000110016 musculin (activated B-cell factor-1)

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
mscdr11_v1_chr24_+_13735616_13735616-0.341.5e-01Click!

Activity profile of msc motif

Sorted Z-values of msc motif

Promoter Log-likelihood Transcript Gene Gene Info
chr5_-_19400166 0.90 ENSDART00000008994
forkhead box N4
chr19_+_1184878 0.74 ENSDART00000163539
scratch family zinc finger 1a
chr2_-_17114852 0.71 ENSDART00000006549
PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
chr20_-_48485354 0.63 ENSDART00000124040
ENSDART00000148437
insulinoma-associated 1a
chr3_-_21094437 0.59 ENSDART00000153739
ENSDART00000109790
nemo-like kinase, type 1
chr2_-_17115256 0.56 ENSDART00000190488
PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
chr21_-_17482465 0.51 ENSDART00000004548
BarH-like homeobox 1b
chr19_-_10214264 0.50 ENSDART00000053300
ENSDART00000148225
zinc finger protein 865
chr16_+_40575742 0.48 ENSDART00000161503
cyclin E2
chr15_-_5624361 0.46 ENSDART00000176446
ENSDART00000114410
WD repeat domain 62
chr1_+_8694196 0.44 ENSDART00000025604
zgc:77849
chr17_-_14836320 0.43 ENSDART00000157051
nidogen 2a (osteonidogen)
chr23_+_35714574 0.43 ENSDART00000164616
tubulin, alpha 1c
chr1_-_55118745 0.43 ENSDART00000133915
SERTA domain containing 2a
chr4_-_21466480 0.42 ENSDART00000139962
PRKC, apoptosis, WT1, regulator
chr8_+_48484455 0.42 ENSDART00000122737
si:ch211-263k4.2
chr23_-_27647769 0.41 ENSDART00000059974
wingless-type MMTV integration site family, member 10b
chr22_+_465269 0.41 ENSDART00000145767
cadherin, EGF LAG seven-pass G-type receptor 2
chr19_-_2317558 0.40 ENSDART00000190300
sp8 transcription factor a
chr1_-_17587552 0.40 ENSDART00000039917
acyl-CoA synthetase long chain family member 1a
chr21_+_13205859 0.39 ENSDART00000102253
spectrin alpha, non-erythrocytic 1
chr17_+_23968214 0.39 ENSDART00000183053
exportin 1 (CRM1 homolog, yeast) b
chr14_+_7939216 0.39 ENSDART00000171657
CXXC finger protein 5b
chr7_+_6652967 0.39 ENSDART00000102681
purine nucleoside phosphorylase 5a
chr12_-_31484677 0.38 ENSDART00000066578
tectorin beta
chr7_+_44715224 0.38 ENSDART00000184630
si:dkey-56m19.5
chr17_-_51195651 0.38 ENSDART00000191205
ENSDART00000088185
papilin a, proteoglycan-like sulfated glycoprotein
chr15_-_32383529 0.37 ENSDART00000028349
complement component 4
chr8_-_14609284 0.37 ENSDART00000146175
centrosomal protein 350
chr7_+_19552381 0.37 ENSDART00000169060
si:ch211-212k18.5
chr13_+_43400443 0.37 ENSDART00000084321
dishevelled-binding antagonist of beta-catenin 2
chr14_+_7939398 0.36 ENSDART00000189773
CXXC finger protein 5b
chr13_+_22317216 0.36 ENSDART00000110794
ubiquitin specific peptidase 54a
chr23_+_16948049 0.36 ENSDART00000139449
si:dkey-147f3.4
chr18_-_20560007 0.36 ENSDART00000141367
ENSDART00000090186
si:ch211-238n5.4
chr3_-_29962345 0.35 ENSDART00000136819
branched chain amino-acid transaminase 2, mitochondrial
chr15_+_32727848 0.35 ENSDART00000161361
periostin, osteoblast specific factor b
chr5_+_50879545 0.35 ENSDART00000128402
nucleolar protein 6 (RNA-associated)
chr17_+_38262408 0.34 ENSDART00000017493
NK2 homeobox 1
chr19_-_30810328 0.34 ENSDART00000184875
MYCL proto-oncogene, bHLH transcription factor b
chr22_-_18179214 0.34 ENSDART00000129576
si:ch211-125m10.6
chr14_-_32255126 0.32 ENSDART00000017259
fibroblast growth factor 13a
chr22_+_24770744 0.32 ENSDART00000142882
si:rp71-23d18.4
chr1_+_33401774 0.32 ENSDART00000149786
ENSDART00000110026
ENSDART00000148946
dehydrogenase/reductase (SDR family) X-linked
chr11_+_14622379 0.31 ENSDART00000112589
ephrin-A2b
chr18_+_36631923 0.31 ENSDART00000098980
zinc finger protein 296
chr5_-_32396929 0.31 ENSDART00000023977
F-box and WD repeat domain containing 2
chr15_-_39969988 0.31 ENSDART00000146054
ribosomal protein S5
chr7_+_66634167 0.30 ENSDART00000027616
eukaryotic translation initiation factor 4, gamma 2a
chr2_+_1988036 0.30 ENSDART00000155956
synovial sarcoma, X breakpoint 2 interacting protein a
chr15_-_8517376 0.30 ENSDART00000186289
neuronal PAS domain protein 1
chr6_-_10728921 0.30 ENSDART00000151484
Sp3b transcription factor
chr19_+_28187480 0.30 ENSDART00000183825
iroquois homeobox 4b
chr6_+_23057311 0.29 ENSDART00000026448
envoplakin a
chr4_+_53976731 0.29 ENSDART00000165813
si:ch211-249c2.1
chr9_+_21795917 0.29 ENSDART00000169069
REV1, polymerase (DNA directed)
chr14_+_38656776 0.29 ENSDART00000186197
ENSDART00000185861
ENSDART00000020625
F-box protein 38
chr6_-_10728057 0.29 ENSDART00000002247
Sp3b transcription factor
chr2_-_42628028 0.28 ENSDART00000179866
myosin X
chr11_-_35171162 0.28 ENSDART00000017393
TRAF-interacting protein
chr16_+_26706519 0.28 ENSDART00000142706
vir like m6A methyltransferase associated
chr20_-_21672970 0.28 ENSDART00000133286
si:ch211-207i1.2
chr5_-_51998708 0.28 ENSDART00000097194
serine incorporator 5
chr18_-_10995410 0.27 ENSDART00000136751
tetraspanin 33b
chr5_-_38451082 0.27 ENSDART00000136428
cholinergic receptor, nicotinic, epsilon
chr5_+_25762271 0.27 ENSDART00000181323
transmembrane protein 2
chr12_+_20693743 0.27 ENSDART00000153023
ENSDART00000153370
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2
chr19_+_42770041 0.27 ENSDART00000150930
cytoplasmic linker associated protein 2
chr5_+_32835219 0.27 ENSDART00000140832
ENSDART00000186055
si:ch211-208h16.4
chr7_-_48263516 0.27 ENSDART00000006619
ENSDART00000142370
ENSDART00000148273
ENSDART00000147968
RNA binding protein with multiple splicing 2b
chr9_+_38168012 0.26 ENSDART00000102445
cytoplasmic linker associated protein 1a
chr8_-_44298964 0.26 ENSDART00000098520
frizzled class receptor 10
chr23_-_16692312 0.26 ENSDART00000046784
FK506 binding protein 1Ab
chr7_-_50367642 0.26 ENSDART00000134941
protein regulator of cytokinesis 1b
chr21_+_5974590 0.26 ENSDART00000098499
deoxycytidine kinase
chr14_-_16754262 0.26 ENSDART00000001159
mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
chr15_-_18176694 0.26 ENSDART00000189840
transmembrane protease, serine 5
chr23_+_28494189 0.26 ENSDART00000146990
ENSDART00000006657
HECT, UBA and WWE domain containing 1
chr5_-_40734045 0.26 ENSDART00000010896
ISL LIM homeobox 1
chr11_+_24314148 0.26 ENSDART00000171491
RAS (RAD and GEM)-like GTP-binding 1
chr2_+_36620011 0.26 ENSDART00000177428
p21 protein (Cdc42/Rac)-activated kinase 2a
chr13_+_11876437 0.26 ENSDART00000179753
tripartite motif containing 8a
chr23_-_33738570 0.25 ENSDART00000131680
si:ch211-210c8.7
chr24_-_9300160 0.25 ENSDART00000152378
TGFB-induced factor homeobox 1
chr7_+_37742299 0.25 ENSDART00000143300
bromodomain containing 7
chr22_-_22231720 0.25 ENSDART00000160165
adaptor-related protein complex 3, delta 1 subunit
chr19_+_29808699 0.25 ENSDART00000051799
ENSDART00000164205
histone deacetylase 1
chr8_+_29742237 0.25 ENSDART00000133955
ENSDART00000020621
mitogen-activated protein kinase 4
chr23_-_18057851 0.24 ENSDART00000173075
ENSDART00000173230
ENSDART00000173135
ENSDART00000173431
ENSDART00000173068
ENSDART00000172987
zgc:92287
chr17_+_8799661 0.24 ENSDART00000105326
tonsoku-like, DNA repair protein
chr14_+_6423973 0.24 ENSDART00000051556
ATP-binding cassette, sub-family A (ABC1), member 1B
chr9_-_28939181 0.24 ENSDART00000101276
ENSDART00000135334
erythrocyte membrane protein band 4.1 like 5
chr24_+_24461558 0.24 ENSDART00000182424
basic helix-loop-helix family, member e22
chr12_-_48168135 0.24 ENSDART00000186624
phosphatase domain containing, paladin 1a
chr6_+_2097690 0.24 ENSDART00000193770
transglutaminase 2b
chr10_+_25355308 0.24 ENSDART00000100415
map3k7 C-terminal like
chr11_-_44999858 0.24 ENSDART00000167759
ENSDART00000126845
LIM-domain binding 1b
chr1_+_35473219 0.23 ENSDART00000109678
ENSDART00000181635
ubiquitin specific peptidase 38
chr1_-_29747702 0.23 ENSDART00000133225
ENSDART00000189670
secreted phosphoprotein 2
chr17_+_8799451 0.23 ENSDART00000189814
ENSDART00000191577
tonsoku-like, DNA repair protein
chr16_+_28764017 0.23 ENSDART00000122433
tripartite motif containing 33, like
chr24_+_26276805 0.23 ENSDART00000089749
adiponectin, C1Q and collagen domain containing, a
chr19_+_29808471 0.23 ENSDART00000186428
histone deacetylase 1
chr16_-_26676685 0.23 ENSDART00000103431
epithelial splicing regulatory protein 1
chr23_-_18057270 0.22 ENSDART00000173385
zgc:92287
chr19_-_32150078 0.22 ENSDART00000134934
ENSDART00000186410
ENSDART00000181780
phosphoprotein membrane anchor with glycosphingolipid microdomains 1
chr16_+_28728347 0.22 ENSDART00000149240
si:dkey-24i24.3
chr8_+_14381272 0.22 ENSDART00000057642
acyl-CoA binding domain containing 6
chr16_+_24721556 0.22 ENSDART00000155754
smg9 nonsense mediated mRNA decay factor
chr17_-_21066075 0.22 ENSDART00000078763
ENSDART00000104327
visual system homeobox 1 homolog, chx10-like
chr20_+_43691208 0.22 ENSDART00000152976
ENSDART00000045185
lin-9 DREAM MuvB core complex component
chr5_-_22019061 0.22 ENSDART00000113066
APC membrane recruitment protein 1
chr18_-_19819812 0.21 ENSDART00000060344
alpha and gamma adaptin binding protein
chr13_+_24287093 0.21 ENSDART00000058628
centriole, cilia and spindle-associated protein b
chr13_+_11876145 0.21 ENSDART00000128249
tripartite motif containing 8a
chr10_+_15777258 0.21 ENSDART00000140511
amyloid beta (A4) precursor protein-binding, family A, member 1b
chr3_-_28075756 0.21 ENSDART00000122037
RNA binding fox-1 homolog 1
chr2_-_15040345 0.21 ENSDART00000109657
si:dkey-10f21.4
chr18_+_30441740 0.21 ENSDART00000189074
Gse1 coiled-coil protein
chr16_-_13623659 0.20 ENSDART00000168978
si:dkeyp-69b9.6
chr11_+_24313931 0.20 ENSDART00000017599
ENSDART00000166045
RAS (RAD and GEM)-like GTP-binding 1
chr2_+_32016516 0.20 ENSDART00000135040
MYC proto-oncogene, bHLH transcription factor b
chr7_-_18470963 0.20 ENSDART00000173929
ENSDART00000173638
zinc finger protein 16 like
chr7_+_20471315 0.20 ENSDART00000173714
si:dkey-19b23.13
chr7_+_6969909 0.20 ENSDART00000189886
actinin alpha 3b
chr20_-_37831849 0.20 ENSDART00000188483
ENSDART00000153005
ENSDART00000142364
si:ch211-147d7.5
chr24_+_20575259 0.19 ENSDART00000010488
kelch-like family member 40b
chr23_-_19484160 0.19 ENSDART00000137026
family with sequence similarity 208, member Ab
chr7_-_69795488 0.19 ENSDART00000162414
ubiquitin specific peptidase 53
chr5_-_30475011 0.19 ENSDART00000187501
pleckstrin homology-like domain, family B, member 1a
chr10_+_29850330 0.19 ENSDART00000168898
heat shock protein 8
chr7_+_31879649 0.19 ENSDART00000099789
myosin binding protein C, cardiac
chr16_+_30933044 0.18 ENSDART00000184453
glutathione S-transferase kappa 2
chr7_-_41726657 0.18 ENSDART00000099121
ADP-ribosylation factor-like 8
chr10_+_2841205 0.18 ENSDART00000131505
ENSDART00000055869
YKT6 v-SNARE homolog (S. cerevisiae)
chr7_-_68373495 0.18 ENSDART00000167440
zinc finger homeobox 3
chr1_-_17650223 0.18 ENSDART00000043484
si:dkey-256e7.5
chr13_+_2894536 0.18 ENSDART00000183678

chr4_-_23858900 0.17 ENSDART00000123199
USP6 N-terminal like
chr6_-_2454691 0.17 ENSDART00000192820
mediator complex subunit 8
chr1_+_27825980 0.17 ENSDART00000160524
paraspeckle component 1
chr5_+_57924611 0.17 ENSDART00000050949
B-cell translocation gene 4
chr25_+_36674715 0.17 ENSDART00000111861
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b)
chr5_-_13315726 0.17 ENSDART00000143364
stromal cell-derived factor 2-like 1
chr3_-_49514874 0.17 ENSDART00000167179
anti-silencing function 1Ba histone chaperone
chr11_-_36450770 0.17 ENSDART00000128889
zinc finger and BTB domain containing 40
chr11_-_41966854 0.17 ENSDART00000055709
hairy-related 2
chr19_-_20446756 0.17 ENSDART00000140711
TBC1 domain family, member 5
chr10_-_6867282 0.16 ENSDART00000144001
ENSDART00000109744
diphosphoinositol pentakisphosphate kinase 2
chr20_-_39391833 0.16 ENSDART00000135149
si:dkey-217m5.8
chr18_-_26797723 0.16 ENSDART00000008013
SEC11 homolog A, signal peptidase complex subunit
chr11_+_18873113 0.16 ENSDART00000103969
ENSDART00000103968
membrane associated guanylate kinase, WW and PDZ domain containing 1b
chr9_-_98982 0.16 ENSDART00000147882
LIM and senescent cell antigen-like domains 2
chr16_-_13623928 0.16 ENSDART00000164344
si:dkeyp-69b9.6
chr4_+_12615836 0.16 ENSDART00000003583
LIM domain only 3
chr9_-_8454060 0.16 ENSDART00000110158
insulin receptor substrate 2b
chr5_+_34622320 0.15 ENSDART00000141338
ectodermal-neural cortex 1
chr1_-_39895859 0.15 ENSDART00000135791
ENSDART00000035739
transmembrane protein 134
chr9_-_27717006 0.15 ENSDART00000146860
general transcription factor IIE, polypeptide 1, alpha
chr25_-_7650335 0.15 ENSDART00000089034
myosin VAb
chr15_+_1397811 0.15 ENSDART00000102125
schwannomin interacting protein 1
chr19_+_40145400 0.15 ENSDART00000049968
si:ch211-173p18.3
chr19_+_7636941 0.15 ENSDART00000081611
ENSDART00000163805
ENSDART00000112404
cingulin b
chr7_+_24251367 0.15 ENSDART00000173642
sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
chr1_-_26293203 0.15 ENSDART00000180140
CXXC finger 4
chr18_+_44566863 0.15 ENSDART00000176084
DEAH (Asp-Glu-Ala-His) box polypeptide 34
chr22_+_16308806 0.14 ENSDART00000162685
leucine rich repeat containing 39
chr2_-_39015130 0.14 ENSDART00000044331
coatomer protein complex, subunit beta 2
chr9_+_30633184 0.14 ENSDART00000191310
TBC1 domain family, member 4
chr19_+_35002479 0.14 ENSDART00000103266
WDYHV motif containing 1
chr16_-_19568795 0.14 ENSDART00000185141
ATP-binding cassette, sub-family B (MDR/TAP), member 5
chr15_-_16177603 0.14 ENSDART00000156352
si:ch211-259g3.4
chr10_+_29849977 0.14 ENSDART00000180242
heat shock protein 8
chr25_-_25619550 0.14 ENSDART00000150400
TBC1 domain family, member 2B
chr2_-_42128714 0.14 ENSDART00000047055
tripartite motif containing 55a
chr10_+_15777064 0.14 ENSDART00000114483
amyloid beta (A4) precursor protein-binding, family A, member 1b
chr13_-_7575216 0.14 ENSDART00000159443
paired-like homeodomain 3
chr13_-_14926318 0.13 ENSDART00000142785
cell division cycle 25B
chr1_+_20593653 0.13 ENSDART00000132440
si:ch211-142c4.1
chr9_+_2020667 0.13 ENSDART00000157818
limb and neural patterns a
chr21_+_27382893 0.13 ENSDART00000005682
actinin alpha 3a
chr4_+_8532580 0.13 ENSDART00000162065
wingless-type MMTV integration site family, member 5b
chr1_-_26292897 0.13 ENSDART00000112899
ENSDART00000185410
CXXC finger 4
chr23_-_7826849 0.12 ENSDART00000157612
myelin transcription factor 1b
chr23_-_19831739 0.12 ENSDART00000125066
HAUS augmin-like complex, subunit 7
chr19_-_33087246 0.12 ENSDART00000052078
kelch-like family member 38a
chr3_+_20156956 0.12 ENSDART00000125281
nerve growth factor receptor a (TNFR superfamily, member 16)
chr22_+_2260497 0.12 ENSDART00000142890
si:dkey-4c15.9
chr11_-_28050559 0.12 ENSDART00000136859
endothelin converting enzyme 1
chr19_+_9666961 0.12 ENSDART00000104596
ENSDART00000132124
si:dkey-14o18.6
chr7_+_7048245 0.12 ENSDART00000001649
actinin alpha 3b
chr21_-_45363871 0.11 ENSDART00000075443
ENSDART00000182078
ENSDART00000151106
zgc:56064
chr12_-_31103187 0.11 ENSDART00000005562
ENSDART00000031408
ENSDART00000125046
ENSDART00000009237
ENSDART00000122972
ENSDART00000153068
transcription factor 7 like 2
chr13_+_1575276 0.11 ENSDART00000165987
dystonin
chr3_-_15889508 0.11 ENSDART00000148363
cramped chromatin regulator homolog 1
chr14_-_15699528 0.11 ENSDART00000161123
neuralized E3 ubiquitin protein ligase 1B
chr20_+_20902549 0.11 ENSDART00000181195
BRF1, RNA polymerase III transcription initiation factor b
chr3_+_23654233 0.11 ENSDART00000078428
homeobox B13a
chr18_+_19820008 0.11 ENSDART00000079691
ENSDART00000135049
IQ motif containing H
chr20_-_22798794 0.11 ENSDART00000148084
FIP1 like 1a (S. cerevisiae)

Network of associatons between targets according to the STRING database.

First level regulatory network of msc

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 GO:0035881 amacrine cell differentiation(GO:0035881)
0.1 0.3 GO:0071431 tRNA export from nucleus(GO:0006409) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 1.3 GO:0000002 mitochondrial genome maintenance(GO:0000002)
0.1 0.5 GO:1901841 regulation of high voltage-gated calcium channel activity(GO:1901841) negative regulation of high voltage-gated calcium channel activity(GO:1901842)
0.1 0.6 GO:0060221 retinal rod cell differentiation(GO:0060221)
0.1 0.4 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.3 GO:2000171 negative regulation of dendrite development(GO:2000171)
0.1 0.2 GO:0048340 paraxial mesoderm morphogenesis(GO:0048340) paraxial mesoderm formation(GO:0048341)
0.1 0.3 GO:0070987 error-free translesion synthesis(GO:0070987)
0.1 0.5 GO:0033687 osteoblast proliferation(GO:0033687)
0.1 0.2 GO:0098528 skeletal muscle fiber differentiation(GO:0098528)
0.1 0.3 GO:1902946 positive regulation of receptor-mediated endocytosis(GO:0048260) protein localization to early endosome(GO:1902946)
0.1 0.3 GO:0051145 smooth muscle cell differentiation(GO:0051145) negative regulation of muscle cell differentiation(GO:0051148)
0.0 0.1 GO:0001120 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120)
0.0 0.1 GO:0065001 specification of axis polarity(GO:0065001)
0.0 0.1 GO:0046689 response to mercury ion(GO:0046689) detoxification of mercury ion(GO:0050787)
0.0 0.2 GO:0003210 cardiac atrium formation(GO:0003210)
0.0 0.4 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.0 0.2 GO:1903292 protein localization to Golgi membrane(GO:1903292)
0.0 0.1 GO:1903373 regulation of endoplasmic reticulum tubular network organization(GO:1903371) positive regulation of endoplasmic reticulum tubular network organization(GO:1903373)
0.0 0.2 GO:1902019 regulation of cilium movement involved in cell motility(GO:0060295) regulation of cilium beat frequency involved in ciliary motility(GO:0060296) regulation of cilium-dependent cell motility(GO:1902019)
0.0 0.2 GO:0006335 DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.0 0.2 GO:1900108 negative regulation of nodal signaling pathway(GO:1900108)
0.0 0.4 GO:0021754 facial nucleus development(GO:0021754)
0.0 0.1 GO:1902373 negative regulation of mRNA catabolic process(GO:1902373) regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000622) negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000623)
0.0 0.1 GO:1902571 regulation of serine-type peptidase activity(GO:1902571)
0.0 0.2 GO:0007405 neuroblast proliferation(GO:0007405)
0.0 0.6 GO:0034453 microtubule anchoring(GO:0034453)
0.0 0.3 GO:0021797 forebrain anterior/posterior pattern specification(GO:0021797)
0.0 0.1 GO:0003322 pancreatic A cell development(GO:0003322)
0.0 0.2 GO:0099517 anterograde synaptic vesicle transport(GO:0048490) synaptic vesicle cytoskeletal transport(GO:0099514) synaptic vesicle transport along microtubule(GO:0099517)
0.0 0.2 GO:0021744 medulla oblongata development(GO:0021550) dorsal motor nucleus of vagus nerve development(GO:0021744)
0.0 0.1 GO:0010226 response to lithium ion(GO:0010226)
0.0 0.4 GO:0048096 chromatin-mediated maintenance of transcription(GO:0048096)
0.0 0.4 GO:0045162 clustering of voltage-gated sodium channels(GO:0045162)
0.0 0.3 GO:0033700 phospholipid efflux(GO:0033700)
0.0 0.1 GO:0009794 regulation of mitotic cell cycle, embryonic(GO:0009794) mitotic cell cycle, embryonic(GO:0045448)
0.0 0.1 GO:1900136 regulation of cytokine activity(GO:0060300) regulation of receptor binding(GO:1900120) regulation of chemokine activity(GO:1900136)
0.0 0.1 GO:0008591 regulation of Wnt signaling pathway, calcium modulating pathway(GO:0008591) positive regulation of convergent extension involved in gastrulation(GO:1904105)
0.0 0.5 GO:0031297 replication fork processing(GO:0031297)
0.0 0.4 GO:0043114 regulation of vascular permeability(GO:0043114)
0.0 0.1 GO:0035332 positive regulation of hippo signaling(GO:0035332)
0.0 0.3 GO:0000022 mitotic spindle elongation(GO:0000022) spindle elongation(GO:0051231) mitotic spindle midzone assembly(GO:0051256)
0.0 0.3 GO:1905150 regulation of voltage-gated sodium channel activity(GO:1905150)
0.0 0.1 GO:0070086 ubiquitin-dependent endocytosis(GO:0070086)
0.0 0.1 GO:0007060 male meiosis chromosome segregation(GO:0007060)
0.0 0.2 GO:1900026 positive regulation of substrate adhesion-dependent cell spreading(GO:1900026)
0.0 0.4 GO:0016203 muscle attachment(GO:0016203)
0.0 0.1 GO:0090136 epithelial cell-cell adhesion(GO:0090136)
0.0 0.3 GO:0030316 osteoclast differentiation(GO:0030316)
0.0 0.2 GO:0046849 bone remodeling(GO:0046849)
0.0 0.2 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.6 GO:0045746 negative regulation of Notch signaling pathway(GO:0045746)
0.0 0.1 GO:0015760 hexose phosphate transport(GO:0015712) glucose-6-phosphate transport(GO:0015760)
0.0 0.4 GO:0035338 long-chain fatty-acyl-CoA biosynthetic process(GO:0035338)
0.0 0.4 GO:0006516 glycoprotein catabolic process(GO:0006516)
0.0 0.3 GO:0006658 phosphatidylserine metabolic process(GO:0006658)
0.0 0.2 GO:0006020 inositol metabolic process(GO:0006020)
0.0 0.3 GO:0007271 synaptic transmission, cholinergic(GO:0007271)
0.0 0.3 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.4 GO:0061386 closure of optic fissure(GO:0061386)
0.0 0.6 GO:0021854 hypothalamus development(GO:0021854)
0.0 0.2 GO:0018149 peptide cross-linking(GO:0018149)
0.0 0.1 GO:0098789 mRNA cleavage involved in mRNA processing(GO:0098787) pre-mRNA cleavage required for polyadenylation(GO:0098789)
0.0 0.3 GO:0040023 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023)
0.0 0.3 GO:0090307 mitotic spindle assembly(GO:0090307) microtubule cytoskeleton organization involved in mitosis(GO:1902850)
0.0 0.1 GO:0046548 retinal rod cell development(GO:0046548)
0.0 0.2 GO:0071712 protein O-linked mannosylation(GO:0035269) ER-associated misfolded protein catabolic process(GO:0071712)
0.0 0.1 GO:0071578 zinc II ion transmembrane import(GO:0071578)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0033268 node of Ranvier(GO:0033268)
0.1 0.5 GO:0097134 cyclin E1-CDK2 complex(GO:0097134)
0.1 0.3 GO:0032545 CURI complex(GO:0032545) UTP-C complex(GO:0034456)
0.1 0.3 GO:0005828 kinetochore microtubule(GO:0005828)
0.1 0.5 GO:0005662 DNA replication factor A complex(GO:0005662)
0.1 0.2 GO:0061673 mitotic spindle astral microtubule(GO:0061673)
0.0 0.1 GO:0098826 endoplasmic reticulum tubular network membrane(GO:0098826)
0.0 0.2 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.1 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 0.1 GO:0071664 catenin-TCF7L2 complex(GO:0071664)
0.0 1.3 GO:0005657 replication fork(GO:0005657)
0.0 0.3 GO:1990023 mitotic spindle midzone(GO:1990023)
0.0 0.3 GO:0005892 acetylcholine-gated channel complex(GO:0005892)
0.0 0.8 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 0.1 GO:0043514 interleukin-12 complex(GO:0043514) interleukin-23 complex(GO:0070743)
0.0 0.4 GO:0045180 basal cortex(GO:0045180)
0.0 0.4 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.5 GO:0031672 A band(GO:0031672)
0.0 0.3 GO:0005640 nuclear outer membrane(GO:0005640)
0.0 0.1 GO:0070652 HAUS complex(GO:0070652)
0.0 0.1 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.1 GO:0030126 COPI vesicle coat(GO:0030126)
0.0 0.1 GO:0033263 CORVET complex(GO:0033263)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 GO:0043139 5'-3' DNA helicase activity(GO:0043139)
0.1 0.4 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.3 GO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0008454)
0.1 1.0 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 0.3 GO:0090554 phospholipid-translocating ATPase activity(GO:0004012) phosphatidylcholine-translocating ATPase activity(GO:0090554) phosphatidylserine-translocating ATPase activity(GO:0090556)
0.0 0.3 GO:0019215 intermediate filament binding(GO:0019215)
0.0 0.4 GO:0004731 purine-nucleoside phosphorylase activity(GO:0004731)
0.0 0.2 GO:0033857 inositol heptakisphosphate kinase activity(GO:0000829) diphosphoinositol-pentakisphosphate kinase activity(GO:0033857)
0.0 0.4 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.0 0.3 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 0.4 GO:0047676 arachidonate-CoA ligase activity(GO:0047676)
0.0 0.1 GO:0031701 angiotensin receptor binding(GO:0031701)
0.0 0.3 GO:0070008 serine-type exopeptidase activity(GO:0070008)
0.0 0.3 GO:0043515 kinetochore binding(GO:0043515)
0.0 0.3 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 0.2 GO:0032036 myosin heavy chain binding(GO:0032036)
0.0 0.1 GO:0042164 interleukin-12 binding(GO:0019972) interleukin-12 alpha subunit binding(GO:0042164)
0.0 0.7 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.3 GO:0070577 lysine-acetylated histone binding(GO:0070577)
0.0 0.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.5 GO:0005246 calcium channel regulator activity(GO:0005246)
0.0 0.1 GO:0005035 death receptor activity(GO:0005035)
0.0 0.1 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) organophosphate:inorganic phosphate antiporter activity(GO:0015315) hexose-phosphate:inorganic phosphate antiporter activity(GO:0015526) glucose 6-phosphate:inorganic phosphate antiporter activity(GO:0061513)
0.0 0.3 GO:0042813 Wnt-activated receptor activity(GO:0042813)
0.0 0.1 GO:0000995 transcription factor activity, core RNA polymerase III binding(GO:0000995)
0.0 0.3 GO:0046875 ephrin receptor binding(GO:0046875)
0.0 0.3 GO:0001540 beta-amyloid binding(GO:0001540)
0.0 0.1 GO:0030274 LIM domain binding(GO:0030274)
0.0 0.1 GO:0070052 collagen V binding(GO:0070052)
0.0 0.2 GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity(GO:0004169)
0.0 0.3 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.3 GO:0017080 sodium channel regulator activity(GO:0017080)
0.0 0.1 GO:0035256 G-protein coupled glutamate receptor binding(GO:0035256)
0.0 0.2 GO:0003810 protein-glutamine gamma-glutamyltransferase activity(GO:0003810)
0.0 0.3 GO:0022848 acetylcholine-gated cation channel activity(GO:0022848)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 SA REG CASCADE OF CYCLIN EXPR Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.
0.0 0.5 PID RANBP2 PATHWAY Sumoylation by RanBP2 regulates transcriptional repression
0.0 1.3 PID TELOMERASE PATHWAY Regulation of Telomerase
0.0 0.3 PID NETRIN PATHWAY Netrin-mediated signaling events
0.0 0.4 PID CERAMIDE PATHWAY Ceramide signaling pathway
0.0 0.5 ST TUMOR NECROSIS FACTOR PATHWAY Tumor Necrosis Factor Pathway.
0.0 0.1 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.0 0.8 WNT SIGNALING Genes related to Wnt-mediated signal transduction
0.0 0.4 PID CASPASE PATHWAY Caspase cascade in apoptosis
0.0 0.3 PID WNT SIGNALING PATHWAY Wnt signaling network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS Genes involved in Caspase-mediated cleavage of cytoskeletal proteins
0.0 0.4 REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GIP Genes involved in Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
0.0 1.0 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.2 REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS Genes involved in Phosphorylation of CD3 and TCR zeta chains
0.0 0.3 REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS Genes involved in Presynaptic nicotinic acetylcholine receptors
0.0 0.4 REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY Genes involved in Post-chaperonin tubulin folding pathway
0.0 0.3 REACTOME PURINE SALVAGE Genes involved in Purine salvage
0.0 0.3 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.0 0.4 REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM Genes involved in Branched-chain amino acid catabolism
0.0 0.7 REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS Genes involved in Class B/2 (Secretin family receptors)
0.0 0.1 REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION Genes involved in Cyclin A/B1 associated events during G2/M transition
0.0 0.3 REACTOME N GLYCAN ANTENNAE ELONGATION Genes involved in N-Glycan antennae elongation