PRJEB1986: zebrafish developmental stages transcriptome

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
tfap2d Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000023272	transcription factor AP-2 delta (activating enhancer binding protein 2 delta)

Gene	Promoter	Pearson corr. coef.	P-value	Plot
tfap2d	dr11_v1_chr20_-_47732703_47732703	0.43	6.7e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr5_+_6796291 Show fit	1.03	ENSDART00000166868 ENSDART00000165308	me2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	malic enzyme 2, NAD(+)-dependent, mitochondrial
chr23_-_41762797 Show fit	1.01	ENSDART00000186564	stk35 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	serine/threonine kinase 35
chr23_-_41762956 Show fit	0.91	ENSDART00000128302	stk35 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	serine/threonine kinase 35
chr4_-_77557279 Show fit	0.87	ENSDART00000180113	AL935186.10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr17_-_19022990 Show fit	0.66	ENSDART00000154186	flrt2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibronectin leucine rich transmembrane protein 2
chr5_-_26936861 Show fit	0.63	ENSDART00000191032	htra4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	HtrA serine peptidase 4
chr22_-_57177 Show fit	0.60	ENSDART00000163959	CABZ01085139.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr8_+_50946379 Show fit	0.57	ENSDART00000139649	b2ml Links NCBI UniProt ZFIN ENSEMBL Google Show fit	beta-2-microglobulin, like
chr22_-_188102 Show fit	0.53	ENSDART00000125391 ENSDART00000170463	CABZ01052268.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr20_-_14925281 Show fit	0.40	ENSDART00000152641	dnm3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dynamin 3a
chr21_-_5856050 Show fit	0.38	ENSDART00000115367	CABZ01071020.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr12_-_19007834 Show fit	0.35	ENSDART00000153248	chadlb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chondroadherin-like b
chr14_+_29609245 Show fit	0.32	ENSDART00000043058	TENM2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-34l15.2
chr10_-_322769 Show fit	0.26	ENSDART00000165244	akt2l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	v-akt murine thymoma viral oncogene homolog 2, like
chr9_-_4511613 Show fit	0.24	ENSDART00000168921	kcnj3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	potassium inwardly-rectifying channel, subfamily J, member 3a
chr25_+_2415131 Show fit	0.21	ENSDART00000162210	zmp:0000000932 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zmp:0000000932
chr17_+_52823015 Show fit	0.19	ENSDART00000160507 ENSDART00000186979	meis2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Meis homeobox 2a
chr16_+_54588930 Show fit	0.18	ENSDART00000159174	dennd4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DENN/MADD domain containing 4B
chr5_+_42388464 Show fit	0.16	ENSDART00000191596	BX548073.13 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr14_+_52369262 Show fit	0.06	ENSDART00000169352 ENSDART00000157833	igfbp7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	insulin-like growth factor binding protein 7
chr17_-_868004 Show fit	0.06	ENSDART00000112803	wdr20a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WD repeat domain 20a
chr10_-_373575 Show fit	0.03	ENSDART00000114487	DMPK Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DM1 protein kinase

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.0	GO:0006108	malate metabolic process(GO:0006108)
0.0	0.6	GO:0002474	antigen processing and presentation of peptide antigen via MHC class I(GO:0002474)
0.0	0.4	GO:0098884	postsynaptic neurotransmitter receptor internalization(GO:0098884)
0.0	0.2	GO:0032483	regulation of Rab protein signal transduction(GO:0032483)
0.0	1.9	GO:0051321	meiotic cell cycle(GO:0051321)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.6	GO:0042612	MHC class I protein complex(GO:0042612)
0.0	0.4	GO:0098844	postsynaptic endocytic zone membrane(GO:0098844)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	1.0	GO:0004473	malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471) malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0	0.2	GO:0015467	G-protein activated inward rectifier potassium channel activity(GO:0015467)
0.0	0.7	GO:0005520	insulin-like growth factor binding(GO:0005520)