PRJEB1986: zebrafish developmental stages transcriptome

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
isl1 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000004023	ISL LIM homeobox 1
isl1l Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000021055	islet1, like
isl1l Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000110204	islet1, like

Gene	Promoter	Pearson corr. coef.	P-value	Plot
isl1	dr11_v1_chr5_-_40734045_40734045	0.23	3.4e-01	Click!
isl1l	dr11_v1_chr10_+_8680730_8680730	-0.22	3.8e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr13_+_46941930 Show fit	2.20	ENSDART00000056962	fbxo5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	F-box protein 5
chr4_+_15968483 Show fit	1.80	ENSDART00000101575	si:dkey-117n7.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-117n7.5
chr14_-_41478265 Show fit	1.39	ENSDART00000149886 ENSDART00000016002	tspan7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tetraspanin 7
chr13_-_50624173 Show fit	1.38	ENSDART00000184181	vox Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ventral homeobox
chr12_-_13205854 Show fit	1.37	ENSDART00000077829	pelo Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pelota mRNA surveillance and ribosome rescue factor
chr14_-_17072736 Show fit	1.33	ENSDART00000106333	phox2bb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paired-like homeobox 2bb
chr2_+_11685742 Show fit	1.28	ENSDART00000138562	greb1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	growth regulation by estrogen in breast cancer-like
chr21_+_723998 Show fit	1.28	ENSDART00000160956	oaz1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ornithine decarboxylase antizyme 1b
chr4_+_5506952 Show fit	1.24	ENSDART00000032857 ENSDART00000160222	mapk11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitogen-activated protein kinase 11
chr2_-_17114852 Show fit	1.24	ENSDART00000006549	pif1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
chr4_-_5826320 Show fit	1.22	ENSDART00000165354	foxm1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	forkhead box M1
chr19_-_47570672 Show fit	1.17	ENSDART00000112155	rrm2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribonucleotide reductase M2 polypeptide
chr22_-_24984733 Show fit	1.09	ENSDART00000142147 ENSDART00000187284	dnal4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dynein, axonemal, light chain 4b
chr7_-_54679595 Show fit	1.08	ENSDART00000165320	ccnd1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cyclin D1
chr8_+_8936912 Show fit	1.08	ENSDART00000135958	si:dkey-83k24.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-83k24.5
chr13_-_50614639 Show fit	1.05	ENSDART00000170527	vent Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ventral expressed homeobox
chr11_-_18107447 Show fit	1.04	ENSDART00000187376	qrich1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutamine-rich 1
chr11_-_10850936 Show fit	1.04	ENSDART00000091901	psmd14 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	proteasome 26S subunit, non-ATPase 14
chr24_+_18714212 Show fit	1.04	ENSDART00000171181	cspp1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosome and spindle pole associated protein 1a
chr21_-_22317920 Show fit	1.03	ENSDART00000191083 ENSDART00000108701	gdpd4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glycerophosphodiester phosphodiesterase domain containing 4b
chr15_-_23529945 Show fit	1.03	ENSDART00000152543	hmbsb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hydroxymethylbilane synthase, b
chr2_+_10821579 Show fit	1.01	ENSDART00000179694	glmna Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glomulin, FKBP associated protein a
chr25_+_30131055 Show fit	1.01	ENSDART00000152705	api5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	apoptosis inhibitor 5
chr14_+_16287968 Show fit	1.00	ENSDART00000106593	prpf19 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pre-mRNA processing factor 19
chr5_+_23136544 Show fit	1.00	ENSDART00000003428 ENSDART00000109340 ENSDART00000171039 ENSDART00000178821	prps1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphoribosyl pyrophosphate synthetase 1A
chr6_-_18618106 Show fit	0.97	ENSDART00000161562	znf207b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 207, b
chr8_-_1051438 Show fit	0.97	ENSDART00000067093 ENSDART00000170737	smyd1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SET and MYND domain containing 1b
chr11_-_18017287 Show fit	0.96	ENSDART00000155443	qrich1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutamine-rich 1
chr13_+_15701849 Show fit	0.96	ENSDART00000003517	trmt61a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tRNA methyltransferase 61A
chr19_+_42432625 Show fit	0.96	ENSDART00000076938	pogza Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pogo transposable element derived with ZNF domain a
chr3_-_23513155 Show fit	0.95	ENSDART00000170200	BX682558.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr12_+_27034760 Show fit	0.95	ENSDART00000181170 ENSDART00000153054	fbrs Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibrosin
chr6_+_22326624 Show fit	0.93	ENSDART00000020333	rae1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribonucleic acid export 1
chr5_+_25762271 Show fit	0.92	ENSDART00000181323	tmem2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane protein 2
chr17_+_32343121 Show fit	0.91	ENSDART00000156051	dhx32b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DEAH (Asp-Glu-Ala-His) box polypeptide 32b
chr8_+_48942470 Show fit	0.91	ENSDART00000005464 ENSDART00000132035	rer1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	retention in endoplasmic reticulum sorting receptor 1
chr16_+_53203370 Show fit	0.90	ENSDART00000154669	si:ch211-269k10.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-269k10.2
chr23_+_31596441 Show fit	0.89	ENSDART00000053534	tbpl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TBP-like 1
chr6_-_53326421 Show fit	0.88	ENSDART00000191740	gnb1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanine nucleotide binding protein (G protein), beta polypeptide 1b
chr2_+_10821127 Show fit	0.87	ENSDART00000145770 ENSDART00000174629 ENSDART00000081094	glmna Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glomulin, FKBP associated protein a
chr12_-_13205572 Show fit	0.86	ENSDART00000152670	pelo Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pelota mRNA surveillance and ribosome rescue factor
chr15_+_36309070 Show fit	0.86	ENSDART00000157034	gmnc Links NCBI UniProt ZFIN ENSEMBL Google Show fit	geminin coiled-coil domain containing
chr7_+_756942 Show fit	0.85	ENSDART00000152224	zgc:63470 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:63470
chr22_+_9922301 Show fit	0.84	ENSDART00000105924	blf Links NCBI UniProt ZFIN ENSEMBL Google Show fit	bloody fingers
chr12_+_14149686 Show fit	0.84	ENSDART00000123741	kbtbd2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kelch repeat and BTB (POZ) domain containing 2
chr20_+_34770197 Show fit	0.84	ENSDART00000018304	mcm3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	minichromosome maintenance complex component 3
chr11_-_14813029 Show fit	0.83	ENSDART00000004920 ENSDART00000122645	sgta Links NCBI UniProt ZFIN ENSEMBL Google Show fit	small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
chr4_-_15103646 Show fit	0.83	ENSDART00000138183 ENSDART00000181044	nrf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear respiratory factor 1
chr11_-_438294 Show fit	0.82	ENSDART00000040812	nuf2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	NUF2, NDC80 kinetochore complex component, homolog
chr15_-_39969988 Show fit	0.82	ENSDART00000146054	rps5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribosomal protein S5
chr25_+_36292057 Show fit	0.82	ENSDART00000152329	bmb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	brambleberry
chr12_-_19028046 Show fit	0.81	ENSDART00000142253 ENSDART00000078484	rangap1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Ran GTPase activating protein 1b
chr4_+_9478500 Show fit	0.81	ENSDART00000030738	lmf2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lipase maturation factor 2b
chr15_-_44052927 Show fit	0.81	ENSDART00000166209	wu:fb44b02 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	wu:fb44b02
chr11_+_6009984 Show fit	0.79	ENSDART00000185680	gtpbp3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GTP binding protein 3, mitochondrial
chr22_+_438714 Show fit	0.79	ENSDART00000136491	celsr2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cadherin, EGF LAG seven-pass G-type receptor 2
chr2_-_25140022 Show fit	0.79	ENSDART00000134543	nceh1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neutral cholesterol ester hydrolase 1a
chr3_-_58650057 Show fit	0.78	ENSDART00000057640	dhrs7ca Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dehydrogenase/reductase (SDR family) member 7Ca
chr22_+_9918872 Show fit	0.77	ENSDART00000177953	blf Links NCBI UniProt ZFIN ENSEMBL Google Show fit	bloody fingers
chr6_+_16031189 Show fit	0.75	ENSDART00000015333	gbx2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	gastrulation brain homeobox 2
chr17_-_29271359 Show fit	0.74	ENSDART00000104219	rcor1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	REST corepressor 1
chr1_+_51475094 Show fit	0.73	ENSDART00000146352	meis1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Meis homeobox 1 a
chr7_+_36898850 Show fit	0.73	ENSDART00000113342	tox3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TOX high mobility group box family member 3
chr7_+_38897836 Show fit	0.72	ENSDART00000024330	creb3l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cAMP responsive element binding protein 3-like 1
chr16_-_55259199 Show fit	0.70	ENSDART00000161130	iqgap3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	IQ motif containing GTPase activating protein 3
chr1_-_19079957 Show fit	0.70	ENSDART00000141795	phox2ba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paired-like homeobox 2ba
chr1_+_41588170 Show fit	0.70	ENSDART00000139175	si:dkey-56e3.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-56e3.2
chr7_+_24496894 Show fit	0.70	ENSDART00000149994	nelfa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	negative elongation factor complex member A
chr7_+_36035432 Show fit	0.69	ENSDART00000179004	irx3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	iroquois homeobox 3a
chr12_+_13205955 Show fit	0.69	ENSDART00000092906	ppp1cab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 1, catalytic subunit, alpha isozyme b
chr9_-_35633827 Show fit	0.69	ENSDART00000077745	zp2l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zona pellucida glycoprotein 2, like 1
chr9_+_14152211 Show fit	0.68	ENSDART00000148055	si:ch211-67e16.11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-67e16.11
chr17_-_19535328 Show fit	0.68	ENSDART00000077809	cyp26c1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytochrome P450, family 26, subfamily C, polypeptide 1
chr7_-_18598661 Show fit	0.67	ENSDART00000182109	DTX4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-119e14.2
chr22_-_14115292 Show fit	0.67	ENSDART00000105717 ENSDART00000165670	aox5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	aldehyde oxidase 5
chr22_-_621888 Show fit	0.66	ENSDART00000135829	srsf3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	serine/arginine-rich splicing factor 3b
chr5_-_36597612 Show fit	0.65	ENSDART00000031270 ENSDART00000122098	rhogc Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ras homolog gene family, member Gc
chr11_+_6010177 Show fit	0.64	ENSDART00000170047 ENSDART00000022526 ENSDART00000161001 ENSDART00000188999	gtpbp3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GTP binding protein 3, mitochondrial
chr7_-_30174882 Show fit	0.64	ENSDART00000110409	frmd5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FERM domain containing 5
chr3_-_58116314 Show fit	0.63	ENSDART00000154901	si:ch211-256e16.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-256e16.6
chr20_+_25712276 Show fit	0.62	ENSDART00000121585 ENSDART00000185772	cep135 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosomal protein 135
chr1_+_59328030 Show fit	0.62	ENSDART00000172464	CABZ01052576.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr15_+_888704 Show fit	0.62	ENSDART00000182796	si:dkey-7i4.9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-7i4.9
chr16_-_35415004 Show fit	0.62	ENSDART00000170401 ENSDART00000157832 ENSDART00000170048	taf12 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr16_+_9762261 Show fit	0.61	ENSDART00000020654	psmd4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	proteasome 26S subunit, non-ATPase 4b
chr7_+_15871156 Show fit	0.61	ENSDART00000145946	pax6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paired box 6b
chr8_-_25033681 Show fit	0.61	ENSDART00000003493	nfyal Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear transcription factor Y, alpha, like
chr10_+_7593185 Show fit	0.60	ENSDART00000162617 ENSDART00000162590 ENSDART00000171744	ppp2cb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 2, catalytic subunit, beta isozyme
chr10_-_1961576 Show fit	0.60	ENSDART00000042441	tdgf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	teratocarcinoma-derived growth factor 1
chr10_+_32104305 Show fit	0.59	ENSDART00000099880	wnt11r Links NCBI UniProt ZFIN ENSEMBL Google Show fit	wingless-type MMTV integration site family, member 11, related
chr20_+_25711718 Show fit	0.58	ENSDART00000033436	cep135 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosomal protein 135
chr22_-_26852516 Show fit	0.57	ENSDART00000005829	gde1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glycerophosphodiester phosphodiesterase 1
chr19_-_30420602 Show fit	0.56	ENSDART00000144121	ppp1r10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 1, regulatory subunit 10
chr15_-_25518084 Show fit	0.56	ENSDART00000158594	hif1al Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hypoxia-inducible factor 1, alpha subunit, like
chr21_+_2506013 Show fit	0.55	ENSDART00000162351	hmgcrb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	3-hydroxy-3-methylglutaryl-CoA reductase b
chr7_-_71585065 Show fit	0.55	ENSDART00000128678	mettl4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	methyltransferase like 4
chr7_+_26998169 Show fit	0.55	ENSDART00000128110 ENSDART00000101018	caprin1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cell cycle associated protein 1a
chr5_-_68495224 Show fit	0.55	ENSDART00000187955	ephb4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	eph receptor B4a
chr10_-_11353101 Show fit	0.54	ENSDART00000092110	lin54 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lin-54 DREAM MuvB core complex component
chr15_-_43625549 Show fit	0.54	ENSDART00000168589	ctsc Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cathepsin C
chr22_-_28644517 Show fit	0.53	ENSDART00000189538	jagn1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	jagunal homolog 1b
chr21_+_26522571 Show fit	0.53	ENSDART00000134617	adssl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adenylosuccinate synthase, like
chr20_-_22464250 Show fit	0.53	ENSDART00000165904	pdgfra Links NCBI UniProt ZFIN ENSEMBL Google Show fit	platelet-derived growth factor receptor, alpha polypeptide
chr6_+_15268685 Show fit	0.53	ENSDART00000128090 ENSDART00000154417	ecrg4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	esophageal cancer related gene 4b
chr9_-_14137295 Show fit	0.53	ENSDART00000127640 ENSDART00000189018 ENSDART00000188985	ttll4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tubulin tyrosine ligase-like family, member 4
chr1_-_43727012 Show fit	0.52	ENSDART00000181064	bdh2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	3-hydroxybutyrate dehydrogenase, type 2
chr6_+_41452979 Show fit	0.52	ENSDART00000007353	wdr82 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WD repeat domain 82
chr4_-_12930086 Show fit	0.51	ENSDART00000013604	lemd3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LEM domain containing 3
chr3_-_40162843 Show fit	0.51	ENSDART00000129664 ENSDART00000025285	drg2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	developmentally regulated GTP binding protein 2
chr10_-_17587832 Show fit	0.51	ENSDART00000113101	smarcad1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 b
chr7_+_15871408 Show fit	0.51	ENSDART00000014572	pax6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paired box 6b
chr1_+_33647682 Show fit	0.50	ENSDART00000114384	znf654 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 654
chr7_+_67429185 Show fit	0.50	ENSDART00000162553 ENSDART00000178646	kars Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lysyl-tRNA synthetase
chr13_-_42536642 Show fit	0.50	ENSDART00000134533	btaf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated
chr18_-_12295092 Show fit	0.50	ENSDART00000033248	fam107b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 107, member B
chr23_-_16734009 Show fit	0.49	ENSDART00000125449	si:ch211-224l10.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-224l10.4
chr13_-_48388726 Show fit	0.49	ENSDART00000169473	fbxo11a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	F-box protein 11a
chr2_-_10821053 Show fit	0.49	ENSDART00000056034	rpap2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RNA polymerase II associated protein 2
chr4_+_15899668 Show fit	0.49	ENSDART00000101592	col7a1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	collagen type VII alpha 1-like
chr14_+_11457500 Show fit	0.48	ENSDART00000169202	si:ch211-153b23.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-153b23.5
chr11_+_2172335 Show fit	0.48	ENSDART00000170593	hoxc12b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	homeobox C12b
chr5_-_42083363 Show fit	0.48	ENSDART00000162596	cxcl11.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chemokine (C-X-C motif) ligand 11, duplicate 5
chr16_-_36979592 Show fit	0.47	ENSDART00000168443	snrnp48 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	small nuclear ribonucleoprotein 48 (U11/U12)
chr6_+_16406723 Show fit	0.47	ENSDART00000040035	ccdc80l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	coiled-coil domain containing 80 like 1
chr12_-_7253270 Show fit	0.46	ENSDART00000035762	ube2d1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin-conjugating enzyme E2D 1b
chr2_+_27010439 Show fit	0.46	ENSDART00000030547	cdh7a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cadherin 7a
chr9_+_41459759 Show fit	0.46	ENSDART00000132501 ENSDART00000100265	nemp2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear envelope integral membrane protein 2
chr1_-_35924495 Show fit	0.45	ENSDART00000184424	smad1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SMAD family member 1
chr8_-_53926228 Show fit	0.45	ENSDART00000015554	ubiad1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UbiA prenyltransferase domain containing 1
chr15_-_24588649 Show fit	0.45	ENSDART00000060469	gemin4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	gem (nuclear organelle) associated protein 4
chr11_+_24316110 Show fit	0.45	ENSDART00000186028	rem1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RAS (RAD and GEM)-like GTP-binding 1
chr9_+_3283608 Show fit	0.45	ENSDART00000192275	hat1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	histone acetyltransferase 1
chr5_-_56948058 Show fit	0.45	ENSDART00000083074 ENSDART00000191028	si:ch211-127d4.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-127d4.3
chr17_-_33716688 Show fit	0.44	ENSDART00000043651	dnal1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dynein, axonemal, light chain 1
chr25_+_7532627 Show fit	0.44	ENSDART00000187660	ptdss2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphatidylserine synthase 2
chr22_+_16308806 Show fit	0.44	ENSDART00000162685	lrrc39 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	leucine rich repeat containing 39
chr11_+_30647545 Show fit	0.44	ENSDART00000114792	gb:eh507706 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	expressed sequence EH507706
chr6_-_40581376 Show fit	0.44	ENSDART00000185412	tspo Links NCBI UniProt ZFIN ENSEMBL Google Show fit	translocator protein
chr12_+_11356592 Show fit	0.44	ENSDART00000148770	si:rp71-19m20.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:rp71-19m20.1
chr17_-_36529016 Show fit	0.44	ENSDART00000025019	colec11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	collectin sub-family member 11
chr9_-_27720612 Show fit	0.43	ENSDART00000000566	gtf2e1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	general transcription factor IIE, polypeptide 1, alpha
chr16_+_9400661 Show fit	0.43	ENSDART00000146174	ice1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	KIAA0947-like (H. sapiens)
chr13_+_48359573 Show fit	0.43	ENSDART00000161959 ENSDART00000165311	msh6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mutS homolog 6 (E. coli)
chr13_-_36391496 Show fit	0.43	ENSDART00000100217 ENSDART00000140243	actn1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	actinin, alpha 1
chr21_-_21178410 Show fit	0.42	ENSDART00000185277 ENSDART00000141341 ENSDART00000145872 ENSDART00000079678	ftsj1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FtsJ RNA methyltransferase homolog 1
chr7_-_34192834 Show fit	0.42	ENSDART00000125131	smad6a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SMAD family member 6a
chr2_+_1881334 Show fit	0.42	ENSDART00000161420	adgrl2b.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adhesion G protein-coupled receptor L2b, tandem duplicate 1
chr8_+_18830759 Show fit	0.41	ENSDART00000089079	mpnd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MPN domain containing
chr4_+_17539134 Show fit	0.41	ENSDART00000013313	itfg2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	integrin alpha FG-GAP repeat containing 2
chr3_-_18737126 Show fit	0.41	ENSDART00000055767	e4f1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	E4F transcription factor 1
chr25_+_36348401 Show fit	0.41	ENSDART00000103006	hist1h2a3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	histone cluster 1 H2A family member 3
chr20_-_5400395 Show fit	0.40	ENSDART00000168103	snw1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SNW domain containing 1
chr20_-_38787341 Show fit	0.40	ENSDART00000136771	dnajc5ga Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a
chr12_+_27034594 Show fit	0.40	ENSDART00000111679	fbrs Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibrosin
chr20_+_18703951 Show fit	0.40	ENSDART00000191070	eif5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	eukaryotic translation initiation factor 5
chr12_+_26706745 Show fit	0.40	ENSDART00000141401	arhgap12b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Rho GTPase activating protein 12b
chr23_+_20431140 Show fit	0.40	ENSDART00000193950	slc35c2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 35 (GDP-fucose transporter), member C2
chr25_-_27541621 Show fit	0.40	ENSDART00000130678	spam1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sperm adhesion molecule 1
chr13_-_9159852 Show fit	0.40	ENSDART00000170185 ENSDART00000158697 ENSDART00000143393 ENSDART00000164973 ENSDART00000159910	HTRA2 (1 of many) Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-112g5.16
chr22_-_9934011 Show fit	0.39	ENSDART00000168223	si:dkey-253d23.9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-253d23.9
chr22_-_20309283 Show fit	0.39	ENSDART00000182125 ENSDART00000048775	si:dkey-110c1.10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-110c1.10
chr23_+_20431388 Show fit	0.39	ENSDART00000132920 ENSDART00000102963 ENSDART00000109899 ENSDART00000140219	slc35c2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 35 (GDP-fucose transporter), member C2
chr6_-_31682135 Show fit	0.39	ENSDART00000153988	cachd1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cache domain containing 1
chr20_+_39686193 Show fit	0.38	ENSDART00000153142	hddc2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	HD domain containing 2
chr1_+_30946231 Show fit	0.38	ENSDART00000022841	metap1d Links NCBI UniProt ZFIN ENSEMBL Google Show fit	methionyl aminopeptidase type 1D (mitochondrial)
chr3_+_13860815 Show fit	0.37	ENSDART00000162451	ilf3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	interleukin enhancer binding factor 3b
chr17_+_21760032 Show fit	0.37	ENSDART00000190425	ikzf5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	IKAROS family zinc finger 5
chr10_-_2943474 Show fit	0.37	ENSDART00000188698	oclna Links NCBI UniProt ZFIN ENSEMBL Google Show fit	occludin a
chr20_+_29209926 Show fit	0.37	ENSDART00000152949 ENSDART00000153016	katnbl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	katanin p80 subunit B-like 1
chr16_-_29194517 Show fit	0.37	ENSDART00000046114 ENSDART00000148899	mef2d Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myocyte enhancer factor 2d
chr13_-_36582341 Show fit	0.36	ENSDART00000137335	lgals3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lectin, galactoside binding soluble 3a
chr3_+_24062748 Show fit	0.36	ENSDART00000188574	cbx1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chromobox homolog 1a (HP1 beta homolog Drosophila)
chr23_+_26142807 Show fit	0.36	ENSDART00000158878	ptpn22 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein tyrosine phosphatase, non-receptor type 22
chr4_+_59711338 Show fit	0.35	ENSDART00000150849	si:dkey-149m13.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-149m13.4
chr12_-_3299149 Show fit	0.35	ENSDART00000182032	lsm12b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LSM12 homolog b
chr14_+_1240419 Show fit	0.35	ENSDART00000181248	adad1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adenosine deaminase domain containing 1 (testis-specific)
chr24_-_32665283 Show fit	0.35	ENSDART00000038364	ca2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	carbonic anhydrase II
chr18_-_50839033 Show fit	0.35	ENSDART00000169773	ddb1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	damage-specific DNA binding protein 1
chr6_+_36844127 Show fit	0.35	ENSDART00000020505	chd1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chromodomain helicase DNA binding protein 1-like
chr8_-_51367298 Show fit	0.35	ENSDART00000060628	chmp7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	charged multivesicular body protein 7
chr12_+_28910762 Show fit	0.35	ENSDART00000076342 ENSDART00000160939 ENSDART00000076572	rnf40 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger protein 40
chr21_-_7781555 Show fit	0.35	ENSDART00000084380 ENSDART00000189131	aggf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	angiogenic factor with G patch and FHA domains 1
chr5_-_64203101 Show fit	0.34	ENSDART00000029364	ak5l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adenylate kinase 5, like
chr3_-_21062706 Show fit	0.34	ENSDART00000155605 ENSDART00000153686 ENSDART00000157168 ENSDART00000156614 ENSDART00000155743 ENSDART00000156275	fam57ba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 57, member Ba
chr25_+_19489370 Show fit	0.34	ENSDART00000091132	glsl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutaminase like
chr2_-_7189594 Show fit	0.34	ENSDART00000139703	rc3h1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger and CCCH-type domains 1b
chr14_-_31693148 Show fit	0.34	ENSDART00000172958	map7d3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MAP7 domain containing 3
chr23_+_36653376 Show fit	0.34	ENSDART00000053189	gpr182 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	G protein-coupled receptor 182
chr5_+_59449762 Show fit	0.33	ENSDART00000150230	clip2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CAP-GLY domain containing linker protein 2
chr24_-_1023112 Show fit	0.33	ENSDART00000147508 ENSDART00000066863	ralaa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	v-ral simian leukemia viral oncogene homolog Aa (ras related)
chr4_+_29909870 Show fit	0.33	ENSDART00000150324	znf1111 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 1111
chr7_-_38664947 Show fit	0.32	ENSDART00000100546 ENSDART00000112405	c6ast1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	six-cysteine containing astacin protease 1
chr4_+_52356485 Show fit	0.32	ENSDART00000170639	zgc:173705 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:173705
chr9_-_41025062 Show fit	0.32	ENSDART00000002053	pms1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	PMS1 homolog 1, mismatch repair system component
chr21_+_31253048 Show fit	0.32	ENSDART00000178521 ENSDART00000132317 ENSDART00000040190	asl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	argininosuccinate lyase
chr7_+_8543317 Show fit	0.31	ENSDART00000114998	jac8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	jacalin 8
chr21_-_30408775 Show fit	0.31	ENSDART00000101037	nhp2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	NHP2 ribonucleoprotein homolog (yeast)
chr20_-_38787047 Show fit	0.31	ENSDART00000152913 ENSDART00000153430	dnajc5ga Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a
chr18_+_35861930 Show fit	0.30	ENSDART00000185223	ppp1r13l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 1, regulatory subunit 13 like
chr11_-_16395956 Show fit	0.30	ENSDART00000115085	lrig1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	leucine-rich repeats and immunoglobulin-like domains 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.6	2.2	GO:0032790	ribosome disassembly(GO:0032790)
0.6	2.2	GO:0051444	negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) negative regulation of ubiquitin protein ligase activity(GO:1904667)
0.3	1.3	GO:0061549	sympathetic ganglion development(GO:0061549)
0.3	0.8	GO:1903334	regulation of protein folding(GO:1903332) positive regulation of protein folding(GO:1903334) regulation of chaperone-mediated protein folding(GO:1903644) positive regulation of chaperone-mediated protein folding(GO:1903646)
0.3	0.8	GO:0070417	cellular response to cold(GO:0070417)
0.2	1.0	GO:0043518	negative regulation of DNA damage response, signal transduction by p53 class mediator(GO:0043518)
0.2	1.0	GO:0046391	5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.2	1.1	GO:0031571	mitotic G1 DNA damage checkpoint(GO:0031571)
0.2	2.4	GO:0042661	regulation of mesodermal cell fate specification(GO:0042661)
0.2	1.2	GO:0010457	centriole-centriole cohesion(GO:0010457)
0.2	0.6	GO:0090008	hypoblast development(GO:0090008)
0.2	0.2	GO:0035773	insulin secretion involved in cellular response to glucose stimulus(GO:0035773) regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061178)
0.2	1.1	GO:2000580	positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.2	0.5	GO:0038158	granulocyte colony-stimulating factor signaling pathway(GO:0038158)
0.2	0.5	GO:0070314	G1 to G0 transition(GO:0070314)
0.2	0.5	GO:0080182	histone H3-K4 trimethylation(GO:0080182)
0.2	0.9	GO:1903251	multi-ciliated epithelial cell differentiation(GO:1903251)
0.2	1.0	GO:0018160	peptidyl-pyrromethane cofactor linkage(GO:0018160)
0.2	0.8	GO:0000741	karyogamy(GO:0000741) pronuclear fusion(GO:0007344)
0.2	0.5	GO:0070940	dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.2	1.1	GO:0003311	pancreatic D cell differentiation(GO:0003311) pancreatic epsilon cell differentiation(GO:0090104)
0.2	0.5	GO:0042373	vitamin K metabolic process(GO:0042373) cellular response to fluid shear stress(GO:0071498)
0.1	0.4	GO:0001112	DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120)
0.1	0.4	GO:0006290	somatic diversification of immune receptors via somatic mutation(GO:0002566) pyrimidine dimer repair(GO:0006290) somatic hypermutation of immunoglobulin genes(GO:0016446)
0.1	0.9	GO:0000972	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972)
0.1	0.9	GO:0006621	protein retention in ER lumen(GO:0006621)
0.1	0.8	GO:0019184	nonribosomal peptide biosynthetic process(GO:0019184)
0.1	1.8	GO:0008608	attachment of spindle microtubules to kinetochore(GO:0008608)
0.1	0.8	GO:1902975	cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.1	0.7	GO:0055014	outflow tract morphogenesis(GO:0003151) atrial cardiac muscle cell development(GO:0055014)
0.1	1.2	GO:0071156	regulation of cell cycle arrest(GO:0071156)
0.1	1.2	GO:0009263	deoxyribonucleotide biosynthetic process(GO:0009263)
0.1	0.5	GO:0003261	cardiac muscle progenitor cell migration to the midline involved in heart field formation(GO:0003261)
0.1	0.3	GO:0031120	snRNA pseudouridine synthesis(GO:0031120)
0.1	1.2	GO:0000002	mitochondrial genome maintenance(GO:0000002)
0.1	1.3	GO:0030241	skeletal muscle myosin thick filament assembly(GO:0030241)
0.1	0.4	GO:0070084	protein initiator methionine removal(GO:0070084)
0.1	0.6	GO:0001955	blood vessel maturation(GO:0001955)
0.1	0.4	GO:1901841	regulation of high voltage-gated calcium channel activity(GO:1901841) negative regulation of high voltage-gated calcium channel activity(GO:1901842)
0.1	0.9	GO:1902624	positive regulation of neutrophil migration(GO:1902624)
0.1	0.3	GO:0015670	carbon dioxide transport(GO:0015670)
0.1	1.3	GO:0006596	polyamine biosynthetic process(GO:0006596)
0.1	0.7	GO:0021871	forebrain regionalization(GO:0021871)
0.1	1.2	GO:0090481	pyrimidine nucleotide-sugar transport(GO:0015781) pyrimidine nucleotide-sugar transmembrane transport(GO:0090481)
0.1	0.3	GO:0006591	arginine biosynthetic process(GO:0006526) ornithine metabolic process(GO:0006591)
0.1	0.5	GO:0035475	angioblast cell migration involved in selective angioblast sprouting(GO:0035475)
0.1	0.4	GO:0072677	eosinophil chemotaxis(GO:0048245) eosinophil migration(GO:0072677)
0.1	0.3	GO:0000338	protein deneddylation(GO:0000338)
0.1	0.9	GO:0051123	RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.1	0.3	GO:0019884	antigen processing and presentation of exogenous peptide antigen(GO:0002478) antigen processing and presentation of exogenous antigen(GO:0019884) antigen processing and presentation of exogenous peptide antigen via MHC class I(GO:0042590)
0.1	1.4	GO:0002098	tRNA wobble uridine modification(GO:0002098)
0.1	0.2	GO:0006391	transcription initiation from mitochondrial promoter(GO:0006391)
0.1	0.4	GO:0071908	determination of intestine left/right asymmetry(GO:0071908)
0.1	0.7	GO:0030656	regulation of isoprenoid metabolic process(GO:0019747) regulation of vitamin metabolic process(GO:0030656) regulation of retinoic acid biosynthetic process(GO:1900052)
0.1	0.8	GO:0021754	facial nucleus development(GO:0021754)
0.1	0.4	GO:0060394	negative regulation of pathway-restricted SMAD protein phosphorylation(GO:0060394)
0.1	0.5	GO:0006167	AMP biosynthetic process(GO:0006167)
0.1	0.7	GO:0034244	negative regulation of DNA-templated transcription, elongation(GO:0032785) negative regulation of transcription elongation from RNA polymerase II promoter(GO:0034244)
0.1	0.4	GO:0051673	membrane disruption in other organism(GO:0051673)
0.0	0.4	GO:0006348	chromatin silencing at telomere(GO:0006348)
0.0	0.2	GO:0061577	calcium ion transmembrane transport via high voltage-gated calcium channel(GO:0061577) regulation of calcium ion transmembrane transport via high voltage-gated calcium channel(GO:1902514)
0.0	0.4	GO:0006659	phosphatidylserine biosynthetic process(GO:0006659)
0.0	0.5	GO:0061300	cerebellum vasculature development(GO:0061300)
0.0	0.5	GO:0000729	DNA double-strand break processing(GO:0000729)
0.0	0.3	GO:0006537	glutamate biosynthetic process(GO:0006537) glutamine catabolic process(GO:0006543)
0.0	0.6	GO:0043248	proteasome assembly(GO:0043248)
0.0	0.2	GO:0003232	bulbus arteriosus development(GO:0003232)
0.0	0.7	GO:0032467	positive regulation of cytokinesis(GO:0032467)
0.0	0.8	GO:0000028	ribosomal small subunit assembly(GO:0000028)
0.0	0.3	GO:0071340	skeletal muscle acetylcholine-gated channel clustering(GO:0071340)
0.0	0.4	GO:0019730	antimicrobial humoral response(GO:0019730)
0.0	0.6	GO:0014823	response to activity(GO:0014823)
0.0	0.4	GO:0036158	outer dynein arm assembly(GO:0036158)
0.0	0.1	GO:0090141	positive regulation of mitochondrial fission(GO:0090141)
0.0	0.3	GO:0060217	hemangioblast cell differentiation(GO:0060217)
0.0	0.4	GO:0030214	hyaluronan catabolic process(GO:0030214)
0.0	0.1	GO:0044821	telomere localization(GO:0034397) telomere tethering at nuclear periphery(GO:0034398) meiotic telomere tethering at nuclear periphery(GO:0044821) meiotic telomere clustering(GO:0045141) meiotic attachment of telomere to nuclear envelope(GO:0070197) chromosome localization to nuclear envelope involved in homologous chromosome segregation(GO:0090220) chromosome attachment to the nuclear envelope(GO:0097240)
0.0	0.2	GO:0006477	protein sulfation(GO:0006477) peptidyl-tyrosine sulfation(GO:0006478)
0.0	0.4	GO:0006382	adenosine to inosine editing(GO:0006382)
0.0	0.5	GO:0018095	protein polyglutamylation(GO:0018095)
0.0	0.1	GO:0050999	regulation of nitric-oxide synthase activity(GO:0050999) positive regulation of nitric-oxide synthase activity(GO:0051000) beta-amyloid clearance(GO:0097242) regulation of beta-amyloid clearance(GO:1900221)
0.0	0.2	GO:0006488	dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0	0.4	GO:0051764	actin crosslink formation(GO:0051764)
0.0	0.2	GO:0018026	peptidyl-lysine monomethylation(GO:0018026) peptidyl-lysine dimethylation(GO:0018027)
0.0	0.3	GO:0031468	nuclear envelope reassembly(GO:0031468)
0.0	0.7	GO:0016601	Rac protein signal transduction(GO:0016601)
0.0	0.4	GO:0001731	formation of translation preinitiation complex(GO:0001731)
0.0	0.5	GO:0018149	peptide cross-linking(GO:0018149)
0.0	0.6	GO:0030488	tRNA methylation(GO:0030488)
0.0	0.1	GO:0030262	apoptotic DNA fragmentation(GO:0006309) cellular component disassembly involved in execution phase of apoptosis(GO:0006921) apoptotic nuclear changes(GO:0030262)
0.0	0.2	GO:0035094	response to nicotine(GO:0035094)
0.0	0.1	GO:0060573	ventral spinal cord interneuron specification(GO:0021521) cell fate specification involved in pattern specification(GO:0060573)
0.0	0.5	GO:0060034	notochord cell differentiation(GO:0060034)
0.0	0.2	GO:2000047	regulation of cell-cell adhesion mediated by cadherin(GO:2000047)
0.0	0.1	GO:1900047	negative regulation of blood coagulation(GO:0030195) negative regulation of hemostasis(GO:1900047)
0.0	0.6	GO:0001878	response to yeast(GO:0001878)
0.0	0.4	GO:0010390	histone monoubiquitination(GO:0010390)
0.0	0.4	GO:0055008	cardiac muscle tissue morphogenesis(GO:0055008)
0.0	0.3	GO:0006298	mismatch repair(GO:0006298)
0.0	0.5	GO:0000387	spliceosomal snRNP assembly(GO:0000387)
0.0	0.5	GO:0070936	protein K48-linked ubiquitination(GO:0070936)
0.0	0.2	GO:0001881	receptor recycling(GO:0001881)
0.0	0.5	GO:0071219	cellular response to molecule of bacterial origin(GO:0071219) cellular response to lipopolysaccharide(GO:0071222)
0.0	0.4	GO:0014029	neural crest formation(GO:0014029)
0.0	0.7	GO:0048484	enteric nervous system development(GO:0048484)
0.0	1.2	GO:0009880	embryonic pattern specification(GO:0009880)
0.0	0.2	GO:0032958	inositol phosphate biosynthetic process(GO:0032958)
0.0	0.1	GO:0042766	nucleosome mobilization(GO:0042766)
0.0	0.0	GO:0006957	complement activation, alternative pathway(GO:0006957)
0.0	0.9	GO:0006352	DNA-templated transcription, initiation(GO:0006352)
0.0	0.2	GO:0010569	regulation of double-strand break repair via homologous recombination(GO:0010569)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	0.8	GO:0072380	TRC complex(GO:0072380)
0.2	1.0	GO:0002189	ribose phosphate diphosphokinase complex(GO:0002189)
0.2	1.0	GO:0071006	U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.2	0.6	GO:0046695	SLIK (SAGA-like) complex(GO:0046695)
0.1	0.4	GO:0032301	MutSalpha complex(GO:0032301)
0.1	0.8	GO:0031262	Ndc80 complex(GO:0031262)
0.1	1.0	GO:0008541	proteasome regulatory particle, lid subcomplex(GO:0008541)
0.1	0.4	GO:0005673	transcription factor TFIIE complex(GO:0005673)
0.1	0.3	GO:0031429	box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1	0.7	GO:0032021	NELF complex(GO:0032021)
0.1	0.9	GO:0097431	mitotic spindle pole(GO:0097431)
0.1	1.4	GO:0031430	M band(GO:0031430)
0.1	0.2	GO:0016600	flotillin complex(GO:0016600)
0.1	0.5	GO:0032797	SMN complex(GO:0032797)
0.1	0.6	GO:0016602	CCAAT-binding factor complex(GO:0016602)
0.0	0.8	GO:0042555	MCM complex(GO:0042555)
0.0	0.4	GO:0001772	immunological synapse(GO:0001772)
0.0	0.3	GO:0032300	mismatch repair complex(GO:0032300)
0.0	0.6	GO:0008540	proteasome regulatory particle, base subcomplex(GO:0008540)
0.0	0.9	GO:0071144	SMAD2-SMAD3 protein complex(GO:0071144)
0.0	0.4	GO:0001669	acrosomal vesicle(GO:0001669)
0.0	0.2	GO:0031515	tRNA (m1A) methyltransferase complex(GO:0031515)
0.0	1.1	GO:0035861	site of double-strand break(GO:0035861)
0.0	0.2	GO:1990454	L-type voltage-gated calcium channel complex(GO:1990454)
0.0	0.4	GO:0008180	COP9 signalosome(GO:0008180)
0.0	0.2	GO:0030670	phagocytic vesicle membrane(GO:0030670)
0.0	0.5	GO:0048188	Set1C/COMPASS complex(GO:0048188)
0.0	1.1	GO:0017053	transcriptional repressor complex(GO:0017053)
0.0	0.2	GO:0032133	chromosome passenger complex(GO:0032133)
0.0	0.1	GO:0034363	intermediate-density lipoprotein particle(GO:0034363)
0.0	1.2	GO:0005657	replication fork(GO:0005657)
0.0	0.6	GO:1990907	beta-catenin-TCF complex(GO:1990907)
0.0	0.3	GO:0000815	ESCRT III complex(GO:0000815)
0.0	1.4	GO:0030286	dynein complex(GO:0030286)
0.0	0.5	GO:0005689	U12-type spliceosomal complex(GO:0005689)
0.0	0.8	GO:0005637	nuclear inner membrane(GO:0005637)
0.0	0.9	GO:0022627	cytosolic small ribosomal subunit(GO:0022627)
0.0	1.0	GO:0000776	kinetochore(GO:0000776)
0.0	0.3	GO:0005669	transcription factor TFIID complex(GO:0005669)
0.0	1.7	GO:0005581	collagen trimer(GO:0005581)
0.0	1.2	GO:0005814	centriole(GO:0005814)
0.0	1.1	GO:0030173	integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0	0.8	GO:0031965	nuclear membrane(GO:0031965)
0.0	2.9	GO:0005819	spindle(GO:0005819)
0.0	0.7	GO:0000118	histone deacetylase complex(GO:0000118)
0.0	0.6	GO:0016342	catenin complex(GO:0016342)
0.0	0.0	GO:0044279	other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217) other organism cell membrane(GO:0044218) other organism membrane(GO:0044279)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.6	1.9	GO:0055105	ubiquitin-protein transferase inhibitor activity(GO:0055105)
0.3	1.3	GO:0008073	ornithine decarboxylase inhibitor activity(GO:0008073)
0.2	1.0	GO:0004749	ribose phosphate diphosphokinase activity(GO:0004749)
0.2	1.2	GO:0043139	5'-3' DNA helicase activity(GO:0043139)
0.2	0.7	GO:0016623	aldehyde oxidase activity(GO:0004031) oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor(GO:0016623)
0.2	1.0	GO:0004418	hydroxymethylbilane synthase activity(GO:0004418)
0.2	1.2	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.1	0.4	GO:0042806	fucose binding(GO:0042806)
0.1	0.4	GO:0032405	guanine/thymine mispair binding(GO:0032137) single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) oxidized DNA binding(GO:0032356) oxidized purine DNA binding(GO:0032357) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.1	0.5	GO:0048407	platelet-derived growth factor-activated receptor activity(GO:0005017) platelet-derived growth factor binding(GO:0048407)
0.1	0.3	GO:0034513	box H/ACA snoRNA binding(GO:0034513)
0.1	1.7	GO:0070122	isopeptidase activity(GO:0070122)
0.1	0.2	GO:0034246	core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) mitochondrial RNA polymerase binding promoter specificity activity(GO:0034246)
0.1	0.4	GO:0071074	eukaryotic initiation factor eIF2 binding(GO:0071074)
0.1	0.3	GO:0016842	amidine-lyase activity(GO:0016842)
0.1	0.4	GO:0019865	IgE binding(GO:0019863) immunoglobulin binding(GO:0019865)
0.1	0.6	GO:0022850	serotonin-gated cation channel activity(GO:0022850)
0.1	0.3	GO:0019784	NEDD8-specific protease activity(GO:0019784)
0.1	1.5	GO:0042800	histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.1	0.5	GO:0004517	nitric-oxide synthase activity(GO:0004517)
0.1	1.2	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.1	0.9	GO:0031682	G-protein gamma-subunit binding(GO:0031682)
0.1	0.5	GO:0008420	CTD phosphatase activity(GO:0008420)
0.1	0.5	GO:0045236	CXCR chemokine receptor binding(GO:0045236)
0.0	0.3	GO:0035613	RNA stem-loop binding(GO:0035613)
0.0	0.6	GO:0070697	activin receptor binding(GO:0070697)
0.0	0.4	GO:0010485	H4 histone acetyltransferase activity(GO:0010485)
0.0	0.9	GO:0070411	I-SMAD binding(GO:0070411)
0.0	0.7	GO:0035497	cAMP response element binding(GO:0035497)
0.0	0.2	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity(GO:0016429)
0.0	0.6	GO:0009008	DNA-methyltransferase activity(GO:0009008)
0.0	0.6	GO:0017025	TBP-class protein binding(GO:0017025)
0.0	0.5	GO:0070740	protein-glutamic acid ligase activity(GO:0070739) tubulin-glutamic acid ligase activity(GO:0070740)
0.0	0.3	GO:0004359	glutaminase activity(GO:0004359)
0.0	0.4	GO:0043014	alpha-tubulin binding(GO:0043014)
0.0	0.4	GO:0035925	AU-rich element binding(GO:0017091) mRNA 3'-UTR AU-rich region binding(GO:0035925)
0.0	1.2	GO:0004707	MAP kinase activity(GO:0004707)
0.0	0.8	GO:0003688	DNA replication origin binding(GO:0003688)
0.0	0.4	GO:0003726	double-stranded RNA adenosine deaminase activity(GO:0003726)
0.0	0.3	GO:0038062	protein tyrosine kinase collagen receptor activity(GO:0038062) collagen receptor activity(GO:0038064)
0.0	0.4	GO:0004415	hyalurononglucosaminidase activity(GO:0004415)
0.0	1.0	GO:0045505	dynein intermediate chain binding(GO:0045505)
0.0	0.2	GO:0008476	protein-tyrosine sulfotransferase activity(GO:0008476)
0.0	0.8	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.0	0.1	GO:0004726	non-membrane spanning protein tyrosine phosphatase activity(GO:0004726)
0.0	0.2	GO:0015467	G-protein activated inward rectifier potassium channel activity(GO:0015467)
0.0	0.7	GO:0005246	calcium channel regulator activity(GO:0005246)
0.0	0.5	GO:0005003	ephrin receptor activity(GO:0005003)
0.0	0.5	GO:0003810	protein-glutamine gamma-glutamyltransferase activity(GO:0003810)
0.0	0.3	GO:0030983	mismatched DNA binding(GO:0030983)
0.0	0.0	GO:1990715	mRNA CDS binding(GO:1990715)
0.0	1.4	GO:0031490	chromatin DNA binding(GO:0031490)
0.0	2.4	GO:0004519	endonuclease activity(GO:0004519)
0.0	1.1	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0	1.9	GO:0004867	serine-type endopeptidase inhibitor activity(GO:0004867)
0.0	0.8	GO:0019843	rRNA binding(GO:0019843)
0.0	0.2	GO:0046975	histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0	0.8	GO:0061631	ubiquitin conjugating enzyme activity(GO:0061631)
0.0	0.2	GO:0000828	inositol hexakisphosphate kinase activity(GO:0000828)
0.0	2.2	GO:0004857	enzyme inhibitor activity(GO:0004857)
0.0	0.4	GO:0008175	tRNA methyltransferase activity(GO:0008175)
0.0	0.9	GO:0003678	DNA helicase activity(GO:0003678)
0.0	0.3	GO:0004089	carbonate dehydratase activity(GO:0004089)
0.0	0.3	GO:0004550	nucleoside diphosphate kinase activity(GO:0004550)
0.0	0.4	GO:0070006	metalloaminopeptidase activity(GO:0070006)
0.0	0.1	GO:0016405	CoA-ligase activity(GO:0016405)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.1	PID P38 GAMMA DELTA PATHWAY	Signaling mediated by p38-gamma and p38-delta
0.1	1.2	PID P38 MK2 PATHWAY	p38 signaling mediated by MAPKAP kinases
0.1	2.4	PID PLK1 PATHWAY	PLK1 signaling events
0.0	1.2	PID FOXM1 PATHWAY	FOXM1 transcription factor network
0.0	0.5	PID ALK2 PATHWAY	ALK2 signaling events
0.0	2.0	PID E2F PATHWAY	E2F transcription factor network
0.0	0.4	PID SYNDECAN 4 PATHWAY	Syndecan-4-mediated signaling events
0.0	0.6	PID GLYPICAN 1PATHWAY	Glypican 1 network
0.0	0.6	PID ATF2 PATHWAY	ATF-2 transcription factor network
0.0	1.2	PID TELOMERASE PATHWAY	Regulation of Telomerase
0.0	0.2	SA MMP CYTOKINE CONNECTION	Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.
0.0	0.1	PID SYNDECAN 2 PATHWAY	Syndecan-2-mediated signaling events
0.0	0.4	PID HDAC CLASSIII PATHWAY	Signaling events mediated by HDAC Class III
0.0	0.7	PID P53 REGULATION PATHWAY	p53 pathway
0.0	0.7	PID RAC1 PATHWAY	RAC1 signaling pathway
0.0	0.6	PID TGFBR PATHWAY	TGF-beta receptor signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.2	REACTOME P38MAPK EVENTS	Genes involved in p38MAPK events
0.1	3.4	REACTOME G1 S SPECIFIC TRANSCRIPTION	Genes involved in G1/S-Specific Transcription
0.1	1.5	REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION	Genes involved in Pre-NOTCH Transcription and Translation
0.1	0.8	REACTOME UNWINDING OF DNA	Genes involved in Unwinding of DNA
0.1	0.6	REACTOME SIGNALING BY NODAL	Genes involved in Signaling by NODAL
0.1	0.6	REACTOME CTLA4 INHIBITORY SIGNALING	Genes involved in CTLA4 inhibitory signaling
0.0	0.6	REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS	Genes involved in Cell-extracellular matrix interactions
0.0	0.2	REACTOME CD28 DEPENDENT VAV1 PATHWAY	Genes involved in CD28 dependent Vav1 pathway
0.0	0.5	REACTOME SIGNALING BY BMP	Genes involved in Signaling by BMP
0.0	1.3	REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING	Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0	0.3	REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE	Genes involved in Reversible Hydration of Carbon Dioxide
0.0	0.7	REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE	Genes involved in Cytochrome P450 - arranged by substrate type
0.0	0.5	REACTOME G0 AND EARLY G1	Genes involved in G0 and Early G1
0.0	1.0	REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES	Genes involved in Cross-presentation of soluble exogenous antigens (endosomes)
0.0	0.2	REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS	Genes involved in Presynaptic nicotinic acetylcholine receptors
0.0	0.9	REACTOME NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY	Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery
0.0	0.5	REACTOME MITOCHONDRIAL TRNA AMINOACYLATION	Genes involved in Mitochondrial tRNA aminoacylation
0.0	0.3	REACTOME FORMATION OF INCISION COMPLEX IN GG NER	Genes involved in Formation of incision complex in GG-NER
0.0	1.0	REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES	Genes involved in Loss of Nlp from mitotic centrosomes
0.0	0.9	REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX	Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.0	0.5	REACTOME METABOLISM OF NON CODING RNA	Genes involved in Metabolism of non-coding RNA
0.0	0.2	REACTOME IL 6 SIGNALING	Genes involved in Interleukin-6 signaling
0.0	0.8	REACTOME MITOTIC PROMETAPHASE	Genes involved in Mitotic Prometaphase
0.0	0.5	REACTOME CIRCADIAN CLOCK	Genes involved in Circadian Clock
0.0	0.3	REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT	Genes involved in Endosomal Sorting Complex Required For Transport (ESCRT)
0.0	0.3	REACTOME EXTENSION OF TELOMERES	Genes involved in Extension of Telomeres
0.0	0.2	REACTOME KINESINS	Genes involved in Kinesins
0.0	0.8	REACTOME PPARA ACTIVATES GENE EXPRESSION	Genes involved in PPARA Activates Gene Expression
0.0	0.5	REACTOME MHC CLASS II ANTIGEN PRESENTATION	Genes involved in MHC class II antigen presentation
0.0	0.1	REACTOME LYSOSOME VESICLE BIOGENESIS	Genes involved in Lysosome Vesicle Biogenesis