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PRJEB1986: zebrafish developmental stages transcriptome

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Results for clocka+clockb+npas2

Z-value: 2.30

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Transcription factors associated with clocka+clockb+npas2

Gene Symbol Gene ID Gene Info
ENSDARG00000003631 clock circadian regulator b
ENSDARG00000011703 clock circadian regulator a
ENSDARG00000016536 neuronal PAS domain protein 2
ENSDARG00000116993 neuronal PAS domain protein 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
clockadr11_v1_chr20_+_22130284_22130284-0.571.2e-02Click!
clockbdr11_v1_chr1_+_19433004_19433004-0.445.9e-02Click!
npas2dr11_v1_chr5_+_22791686_22791686-0.351.5e-01Click!

Activity profile of clocka+clockb+npas2 motif

Sorted Z-values of clocka+clockb+npas2 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr10_+_22034477 8.82 ENSDART00000133304
ENSDART00000134189
ENSDART00000021240
ENSDART00000100526
nucleophosmin 1a
chr3_+_53773256 5.30 ENSDART00000170461
collagen, type V, alpha 3a
chr23_+_25292147 5.01 ENSDART00000131486
proliferation-associated 2G4, b
chr8_+_26059677 4.71 ENSDART00000009178
IMP (inosine 5'-monophosphate) dehydrogenase 2
chr9_-_11587070 4.69 ENSDART00000030995
uridine monophosphate synthetase
chr19_+_16016038 4.54 ENSDART00000131319
CTP synthase 1a
chr16_-_34195002 4.49 ENSDART00000054026
regulator of chromosome condensation 1
chr13_+_13930263 4.49 ENSDART00000079154
ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase)
chr7_+_29163762 4.21 ENSDART00000173762
solute carrier family 38, member 8b
chr13_+_15701849 4.19 ENSDART00000003517
tRNA methyltransferase 61A
chr7_+_29167744 4.09 ENSDART00000076345
solute carrier family 38, member 8b
chr1_-_44933094 3.87 ENSDART00000147527
si:dkey-9i23.14
chr14_+_14836468 3.86 ENSDART00000166728
si:dkey-102m7.3
chr4_+_47257854 3.82 ENSDART00000173868
crestin
chr5_-_32505109 3.82 ENSDART00000188219
N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr6_+_3717613 3.69 ENSDART00000184330
Sjogren syndrome antigen B (autoantigen La)
chr3_-_1339220 3.69 ENSDART00000172000
transmembrane protein 106C
chr21_+_43702016 3.66 ENSDART00000017176
dyskeratosis congenita 1, dyskerin
chr5_-_32505276 3.56 ENSDART00000034705
ENSDART00000187597
N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr8_-_11229523 3.55 ENSDART00000002164
unc-45 myosin chaperone B
chr20_-_25626693 3.40 ENSDART00000132247
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
chr13_-_24260609 3.37 ENSDART00000138747
URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
chr5_-_24543526 3.36 ENSDART00000046384
tRNA methyltransferase 2 homolog A
chr5_+_68807170 3.30 ENSDART00000017849
hairy and enhancer of split related-7
chr25_+_19734038 3.21 ENSDART00000067354
zgc:101783
chr20_-_38827623 3.21 ENSDART00000153310
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr17_-_49407091 3.20 ENSDART00000021950
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b
chr25_-_8625601 3.11 ENSDART00000155280
zgc:153343
chr2_+_25840463 3.09 ENSDART00000125178
eukaryotic translation initiation factor 5A2
chr7_-_32021853 3.08 ENSDART00000134521
kinesin family member 18A
chr7_+_41812636 3.08 ENSDART00000174333
origin recognition complex, subunit 6
chr14_+_22076596 3.04 ENSDART00000106147
ENSDART00000100278
ENSDART00000131489
solute carrier family 43 (amino acid system L transporter), member 1a
chr13_-_31370184 3.02 ENSDART00000034829
ribosomal RNA processing 12 homolog
chr20_-_25626198 3.00 ENSDART00000126716
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
chr10_+_17714866 3.00 ENSDART00000039969
solute carrier family 20 (phosphate transporter), member 1b
chr19_+_48359259 2.98 ENSDART00000167353
shugoshin 1
chr24_+_36317544 2.97 ENSDART00000048640
ENSDART00000156096
pseudouridylate synthase 3
chr9_+_21358941 2.96 ENSDART00000147619
ENSDART00000059402
EEF1A lysine methyltransferase 1
chr7_-_30174882 2.96 ENSDART00000110409
FERM domain containing 5
chr14_+_6423973 2.96 ENSDART00000051556
ATP-binding cassette, sub-family A (ABC1), member 1B
chr20_+_36806398 2.95 ENSDART00000153317
ABRA C-terminal like
chr23_+_25291891 2.93 ENSDART00000016248
proliferation-associated 2G4, b
chr11_+_3959495 2.86 ENSDART00000122953
guanine nucleotide binding protein-like 3 (nucleolar)
chr13_+_24380132 2.85 ENSDART00000022682
programmed cell death 2
chr5_+_12836913 2.83 ENSDART00000023101
pescadillo
chr17_+_24821627 2.83 ENSDART00000112389
WD repeat domain 43
chr3_-_25377163 2.81 ENSDART00000055490
karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
chr4_+_25607743 2.79 ENSDART00000028297
acyl-CoA thioesterase 14
chr21_-_21465111 2.79 ENSDART00000141487
nectin cell adhesion molecule 3b
chr20_-_25626428 2.78 ENSDART00000136475
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
chr19_-_18135724 2.77 ENSDART00000186609
chromobox homolog 3a (HP1 gamma homolog, Drosophila)
chr2_+_25839650 2.76 ENSDART00000134077
ENSDART00000140804
eukaryotic translation initiation factor 5A2
chr10_-_11323134 2.71 ENSDART00000039145
ints3 and nabp interacting protein
chr22_+_9922301 2.71 ENSDART00000105924
bloody fingers
chr6_-_52348562 2.70 ENSDART00000142565
ENSDART00000145369
ENSDART00000016890
eukaryotic translation initiation factor 6
chr9_+_29985010 2.69 ENSDART00000020743
cms1 ribosomal small subunit homolog (yeast)
chr6_-_18531349 2.67 ENSDART00000160693
ENSDART00000169780
UTP6, small subunit (SSU) processome component, homolog (yeast)
chr15_-_14038227 2.63 ENSDART00000139068
zgc:114130
chr10_+_39283985 2.63 ENSDART00000016464
decapping enzyme, scavenger
chr7_+_30201611 2.60 ENSDART00000075588
WD repeat domain 76
chr1_-_52461322 2.60 ENSDART00000083836
si:ch211-217k17.7
chr24_-_12938922 2.60 ENSDART00000024084
phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr19_+_16015881 2.60 ENSDART00000187135
CTP synthase 1a
chr1_+_5485799 2.58 ENSDART00000022307
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
chr1_-_51219965 2.56 ENSDART00000146612
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
chr4_-_4756349 2.55 ENSDART00000057507
single-stranded DNA binding protein 1
chr13_+_15702142 2.54 ENSDART00000135960
tRNA methyltransferase 61A
chr13_-_4992395 2.53 ENSDART00000102651
nucleolar and coiled-body phosphoprotein 1
chr13_+_6188759 2.53 ENSDART00000161062
protein phosphatase, Mg2+/Mn2+ dependent, 1G
chr7_+_1505507 2.53 ENSDART00000161015
NOP10 ribonucleoprotein homolog (yeast)
chr20_+_35279968 2.52 ENSDART00000168216
ENSDART00000153332
family with sequence similarity 49, member A
chr6_-_57476465 2.51 ENSDART00000128065
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
chr2_+_25839940 2.48 ENSDART00000139927
eukaryotic translation initiation factor 5A2
chr9_+_29671553 2.47 ENSDART00000015377
ribonuclease H2, subunit B
chr7_+_41812817 2.47 ENSDART00000174165
origin recognition complex, subunit 6
chr13_+_18311410 2.45 ENSDART00000036718
ENSDART00000132073
eukaryotic translation initiation factor 4E family member 1c
chr13_+_31390313 2.41 ENSDART00000111477
ENSDART00000137291
si:dkey-15f17.8
chr2_+_29976419 2.41 ENSDART00000056748
engrailed homeobox 2b
chr19_+_10831362 2.39 ENSDART00000053325
translocase of outer mitochondrial membrane 40 homolog, like
chr8_-_18203092 2.38 ENSDART00000140620
ELOVL fatty acid elongase 8b
chr20_-_37481180 2.37 ENSDART00000152959
si:ch211-202p1.5
chr14_-_35414559 2.35 ENSDART00000145033
ribonuclease H2, subunit C
chr11_-_6974022 2.34 ENSDART00000172851
si:ch211-43f4.1
chr19_+_43579786 2.28 ENSDART00000138404
si:ch211-199g17.2
chr1_-_25438934 2.28 ENSDART00000111686
FH2 domain containing 1
chr25_-_2081371 2.27 ENSDART00000104915
ENSDART00000156925
wingless-type MMTV integration site family, member 7Bb
chr4_+_17642731 2.26 ENSDART00000026509
CWF19-like 1, cell cycle control
chr21_+_38855551 2.25 ENSDART00000171977
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
chr12_+_19384615 2.25 ENSDART00000078266
ribosomal L1 domain containing 1
chr5_-_67499279 2.25 ENSDART00000128050
si:dkey-251i10.3
chr25_+_19733704 2.24 ENSDART00000145334
ENSDART00000138946
ENSDART00000138851
zgc:101783
chr19_-_24555623 2.24 ENSDART00000176022
polymerase (RNA) III (DNA directed) polypeptide G like a
chr25_+_18964782 2.23 ENSDART00000017299
thymine DNA glycosylase, tandem duplicate 1
chr1_-_19648227 2.21 ENSDART00000054574
polymerase (RNA) I polypeptide E
chr9_+_27720428 2.21 ENSDART00000112415
leucine carboxyl methyltransferase 2
chr17_-_114121 2.20 ENSDART00000172408
ENSDART00000157784
Rho GTPase activating protein 11A
chr21_+_8341774 2.20 ENSDART00000129749
ENSDART00000055325
ENSDART00000133804
proteasome subunit beta 7
chr12_-_21684197 2.18 ENSDART00000152999
ENSDART00000153109
ENSDART00000148698
essential meiotic structure-specific endonuclease 1
chr22_-_24984733 2.18 ENSDART00000142147
ENSDART00000187284
dynein, axonemal, light chain 4b
chr6_-_32093830 2.16 ENSDART00000017695
forkhead box D3
chr19_-_24555935 2.15 ENSDART00000132660
ENSDART00000162801
polymerase (RNA) III (DNA directed) polypeptide G like a
chr25_+_28555584 2.14 ENSDART00000157046
si:ch211-190o6.3
chr1_-_19764038 2.13 ENSDART00000005733
translation machinery associated 16 homolog
chr1_+_14454663 2.12 ENSDART00000005067
recombination signal binding protein for immunoglobulin kappa J region a
chr25_+_19095231 2.12 ENSDART00000154066
interferon stimulated exonuclease gene
chr25_+_21098675 2.10 ENSDART00000079012
RAD52 homolog, DNA repair protein
chr25_+_21098990 2.10 ENSDART00000017488
RAD52 homolog, DNA repair protein
chr16_-_17251898 2.10 ENSDART00000114272
NOP2 nucleolar protein homolog (yeast)
chr19_-_47555956 2.08 ENSDART00000114549
actin, alpha, cardiac muscle 1a
chr23_+_17417539 2.07 ENSDART00000182605

chr22_-_12726556 2.05 ENSDART00000105776
family with sequence similarity 207, member A
chr7_+_41812190 2.05 ENSDART00000113732
ENSDART00000174137
origin recognition complex, subunit 6
chr7_+_14536083 2.05 ENSDART00000027331
mitochondrial ribosomal protein L46
chr14_+_16151636 2.05 ENSDART00000159352
polymerase (RNA) I polypeptide A
chr16_-_31919568 2.04 ENSDART00000027364
RNA binding fox-1 homolog 1, like
chr13_-_25199260 2.04 ENSDART00000057605
adenosine kinase a
chr2_+_3044992 2.04 ENSDART00000020463
zgc:63882
chr2_+_25839193 2.03 ENSDART00000078634
eukaryotic translation initiation factor 5A2
chr14_-_25985698 2.03 ENSDART00000172909
ENSDART00000123053
antioxidant 1 copper chaperone
chr7_-_29164818 2.03 ENSDART00000052348
exosome component 6
chr3_-_7296189 2.03 ENSDART00000148349
si:ch1073-186o8.3
chr4_-_4755622 2.00 ENSDART00000193929
single-stranded DNA binding protein 1
chr4_+_18442941 2.00 ENSDART00000190819
non-SMC condensin II complex, subunit H2
chr7_-_30779575 1.98 ENSDART00000004782
M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
chr21_+_21611867 1.98 ENSDART00000189148
B9 domain containing 2
chr21_-_30408775 1.98 ENSDART00000101037
NHP2 ribonucleoprotein homolog (yeast)
chr23_-_3759345 1.96 ENSDART00000132205
ENSDART00000137707
ENSDART00000189382
high mobility group AT-hook 1a
chr2_+_20967673 1.94 ENSDART00000057174
actin related protein 2/3 complex, subunit 5A
chr9_+_24920677 1.92 ENSDART00000037025
solute carrier family 39 (zinc transporter), member 10
chr20_+_25626479 1.91 ENSDART00000143883
phosphoribosyl pyrophosphate amidotransferase
chr12_-_28349026 1.90 ENSDART00000183768
ENSDART00000152998
zgc:195081
chr13_+_8892784 1.88 ENSDART00000075054
ENSDART00000143705
thyroid adenoma associated
chr7_-_57637779 1.87 ENSDART00000028017
MAD2 mitotic arrest deficient-like 1 (yeast)
chr15_+_36309070 1.87 ENSDART00000157034
geminin coiled-coil domain containing
chr25_-_14424406 1.87 ENSDART00000073609
protein arginine methyltransferase 7
chr11_-_6206520 1.86 ENSDART00000150199
ENSDART00000148246
ENSDART00000019440
polymerase (DNA-directed), epsilon 4, accessory subunit
chr9_-_29985390 1.86 ENSDART00000134157
interleukin 1 receptor accessory protein-like 1a
chr1_-_26675969 1.85 ENSDART00000054184
tRNA methyltransferase O
chr23_+_7548797 1.84 ENSDART00000006765
transmembrane 9 superfamily protein member 4
chr16_+_16968682 1.82 ENSDART00000111074
si:ch211-120k19.1
chr5_+_38462121 1.81 ENSDART00000144425
glycolipid transfer protein domain containing 2
chr1_+_43686251 1.81 ENSDART00000074604
ENSDART00000137791
CDGSH iron sulfur domain 2
chr3_+_54581987 1.80 ENSDART00000018071
eukaryotic translation initiation factor 3, subunit G
chr16_-_14074594 1.80 ENSDART00000090234
tripartite motif containing 109
chr17_-_15189397 1.80 ENSDART00000133710
ENSDART00000110507
WD repeat and HMG-box DNA binding protein 1
chr5_-_45958838 1.79 ENSDART00000135072
POC5 centriolar protein homolog (Chlamydomonas)
chr5_+_60847823 1.79 ENSDART00000074426
ligase III, DNA, ATP-dependent
chr3_+_15893039 1.78 ENSDART00000055780
Jupiter microtubule associated homolog 2
chr10_-_15340362 1.78 ENSDART00000148119
ENSDART00000127277
ENSDART00000154037
ENSDART00000189109
pumilio RNA-binding family member 3
chr13_+_22555342 1.77 ENSDART00000193633
bone morphogenetic protein receptor, type IAa
chr3_-_42086577 1.76 ENSDART00000083111
ENSDART00000187312
tweety family member 3a
chr8_-_17184482 1.76 ENSDART00000025803
polymerase (DNA directed), alpha 2
chr12_+_29240124 1.75 ENSDART00000053761
ENSDART00000130172
BMS1 ribosome biogenesis factor
chr1_-_157563 1.75 ENSDART00000018741
PCI domain containing 2
chr16_+_16969060 1.70 ENSDART00000182819
ENSDART00000191876
si:ch211-120k19.1
ribosomal protein L18
chr14_+_36896689 1.69 ENSDART00000168684
ENSDART00000187827
ENSDART00000182511
si:ch211-132p1.4
chr3_-_3398383 1.69 ENSDART00000047865
si:dkey-46g23.2
chr5_+_72194444 1.69 ENSDART00000165436
DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
chr20_+_42537768 1.69 ENSDART00000134066
ENSDART00000153434
si:dkeyp-93d12.1
chr15_-_34056733 1.68 ENSDART00000170130
ENSDART00000188272
si:dkey-30e9.7
chr15_-_2519640 1.68 ENSDART00000047013
signal recognition particle receptor, B subunit
chr19_+_20201254 1.68 ENSDART00000010140
insulin-like growth factor 2 mRNA binding protein 3
chr13_+_6189203 1.67 ENSDART00000109665
protein phosphatase, Mg2+/Mn2+ dependent, 1G
chr20_-_29483514 1.67 ENSDART00000062370
actin, alpha, cardiac muscle 1a
chr3_-_7464250 1.67 ENSDART00000159873
zinc finger protein 1001
chr5_+_24543862 1.66 ENSDART00000029699
ATPase H+ transporting V0 subunit a2b
chr3_+_6443992 1.65 ENSDART00000169325
ENSDART00000162255
nucleoporin 85
chr25_+_30442389 1.64 ENSDART00000003346
programmed cell death 2-like
chr5_+_65040228 1.64 ENSDART00000164278
peptidase (mitochondrial processing) alpha
chr20_-_3310017 1.64 ENSDART00000099315
CCAAT/enhancer binding protein (C/EBP), zeta
chr3_-_58165254 1.63 ENSDART00000093031
SNU13 homolog, small nuclear ribonucleoprotein a (U4/U6.U5)
chr5_-_8817458 1.61 ENSDART00000191098
fibroblast growth factor 10b
chr19_+_2685779 1.60 ENSDART00000160533
ENSDART00000097531
translocase of outer mitochondrial membrane 7 homolog (yeast)
chr7_-_14535862 1.59 ENSDART00000112980
ENSDART00000135446
mitochondrial ribosomal protein S11
chr5_+_29714786 1.58 ENSDART00000148314
DEAD (Asp-Glu-Ala-Asp) box polypeptide 31
chr15_+_5116179 1.58 ENSDART00000101937
phosphoglucomutase 2-like 1
chr7_+_72012397 1.58 ENSDART00000011303
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2
chr9_-_1483879 1.57 ENSDART00000093415
RNA binding motif protein 45
chr3_-_40162843 1.56 ENSDART00000129664
ENSDART00000025285
developmentally regulated GTP binding protein 2
chr3_-_1387292 1.56 ENSDART00000163535
DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
chr7_+_65296901 1.55 ENSDART00000162693
ENSDART00000161609
bolA family member 3
chr17_+_53156530 1.55 ENSDART00000126277
ENSDART00000156774
diphthamine biosynthesis 6
chr18_+_184746 1.54 ENSDART00000140897
La ribonucleoprotein domain family, member 6a
chr4_-_5455506 1.53 ENSDART00000156593
ENSDART00000154676
si:dkey-14d8.22
chr21_-_929448 1.52 ENSDART00000133976
thioredoxin-like 1
chr24_-_36175365 1.52 ENSDART00000065338
PAK1 interacting protein 1
chr6_+_9893554 1.51 ENSDART00000064979
Pim proto-oncogene, serine/threonine kinase, related 74
chr6_-_18531760 1.51 ENSDART00000167167
UTP6, small subunit (SSU) processome component, homolog (yeast)
chr25_-_6292560 1.51 ENSDART00000153496
WD repeat domain 61
chr9_-_27719998 1.51 ENSDART00000161068
ENSDART00000148195
ENSDART00000138386
general transcription factor IIE, polypeptide 1, alpha
chr16_+_25761101 1.49 ENSDART00000110619
Cbl proto-oncogene C, E3 ubiquitin protein ligase
chr21_+_18274825 1.48 ENSDART00000144322
ENSDART00000147768
WD repeat domain 5
chr13_+_39277178 1.48 ENSDART00000113259
si:dkey-85a20.4
chr7_+_30202104 1.47 ENSDART00000173525
WD repeat domain 76
chr15_+_7086327 1.47 ENSDART00000114560
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
chr21_+_3796620 1.47 ENSDART00000099535
ENSDART00000144515
SPOUT domain containing methyltransferase 1
chr14_+_16034447 1.46 ENSDART00000161348
PRELI domain containing 1a
chr25_+_245438 1.46 ENSDART00000004689
zgc:92481
chr8_+_17184602 1.45 ENSDART00000050228
ENSDART00000140531
DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
chr12_-_34827477 1.45 ENSDART00000153026
si:dkey-21c1.6

Network of associatons between targets according to the STRING database.

First level regulatory network of clocka+clockb+npas2

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.7 8.2 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
2.5 7.4 GO:0006480 N-terminal protein amino acid methylation(GO:0006480)
1.9 7.5 GO:0044210 'de novo' CTP biosynthetic process(GO:0044210)
1.6 7.9 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
1.5 4.5 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
1.5 10.4 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
1.4 4.2 GO:0045002 double-strand break repair via single-strand annealing(GO:0045002)
1.4 13.7 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
1.2 10.9 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
1.1 6.5 GO:0045721 negative regulation of gluconeogenesis(GO:0045721)
0.9 2.8 GO:0001113 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120)
0.9 2.7 GO:1902626 mature ribosome assembly(GO:0042256) assembly of large subunit precursor of preribosome(GO:1902626)
0.9 4.5 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.8 4.1 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.7 3.0 GO:0071962 mitotic sister chromatid cohesion, centromeric(GO:0071962)
0.7 3.0 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.7 2.2 GO:0031591 wybutosine metabolic process(GO:0031590) wybutosine biosynthetic process(GO:0031591)
0.7 2.0 GO:0071051 U4 snRNA 3'-end processing(GO:0034475) polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.7 6.8 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.7 2.6 GO:0019401 glycerol biosynthetic process(GO:0006114) alditol biosynthetic process(GO:0019401) short-chain fatty acid catabolic process(GO:0019626) response to dexamethasone(GO:0071548)
0.6 4.5 GO:1901673 regulation of mitotic spindle assembly(GO:1901673)
0.6 1.9 GO:0050861 positive regulation of B cell receptor signaling pathway(GO:0050861)
0.6 3.7 GO:0003272 endocardial cushion formation(GO:0003272)
0.6 1.9 GO:0071514 genetic imprinting(GO:0071514)
0.6 1.8 GO:0043504 mitochondrial DNA repair(GO:0043504)
0.6 1.8 GO:0060912 cardiac cell fate specification(GO:0060912)
0.6 1.7 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.5 2.1 GO:0072314 glomerular visceral epithelial cell fate commitment(GO:0072149) glomerular epithelial cell fate commitment(GO:0072314)
0.5 1.1 GO:0000469 cleavage involved in rRNA processing(GO:0000469)
0.5 6.7 GO:0009303 rRNA transcription(GO:0009303)
0.5 2.0 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.5 2.4 GO:0003100 regulation of systemic arterial blood pressure by endothelin(GO:0003100) vein smooth muscle contraction(GO:0014826) regulation of prostaglandin-endoperoxide synthase activity(GO:0060584) positive regulation of prostaglandin-endoperoxide synthase activity(GO:0060585)
0.5 2.8 GO:0045943 regulation of transcription from RNA polymerase I promoter(GO:0006356) positive regulation of transcription from RNA polymerase I promoter(GO:0045943)
0.5 1.8 GO:0010259 multicellular organism aging(GO:0010259)
0.4 1.3 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.4 2.2 GO:0097066 response to thyroid hormone(GO:0097066)
0.4 1.3 GO:0070914 UV-damage excision repair(GO:0070914)
0.4 1.3 GO:0002188 translation reinitiation(GO:0002188)
0.4 1.6 GO:0060437 lung growth(GO:0060437) secretion by lung epithelial cell involved in lung growth(GO:0061033)
0.4 13.7 GO:0006270 DNA replication initiation(GO:0006270)
0.4 7.5 GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000466)
0.4 0.8 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.4 3.1 GO:0036372 opsin transport(GO:0036372)
0.4 2.6 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.4 1.1 GO:0098581 detection of biotic stimulus(GO:0009595) detection of bacterium(GO:0016045) detection of other organism(GO:0098543) detection of external biotic stimulus(GO:0098581)
0.4 1.5 GO:0051661 maintenance of centrosome location(GO:0051661)
0.4 1.1 GO:0000390 spliceosomal complex disassembly(GO:0000390)
0.4 1.4 GO:1903292 protein localization to Golgi membrane(GO:1903292)
0.4 6.4 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.4 1.1 GO:0033690 positive regulation of osteoblast proliferation(GO:0033690)
0.3 2.0 GO:0044209 AMP salvage(GO:0044209)
0.3 10.5 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.3 3.0 GO:0070475 rRNA base methylation(GO:0070475)
0.3 1.3 GO:0048014 Tie signaling pathway(GO:0048014)
0.3 10.5 GO:0030488 tRNA methylation(GO:0030488)
0.3 3.0 GO:0033700 phospholipid efflux(GO:0033700)
0.3 2.0 GO:0048739 cardiac muscle fiber development(GO:0048739)
0.3 0.9 GO:0042823 pyridoxal phosphate metabolic process(GO:0042822) pyridoxal phosphate biosynthetic process(GO:0042823)
0.3 1.4 GO:0030576 nuclear body organization(GO:0030575) Cajal body organization(GO:0030576)
0.3 1.4 GO:0032776 DNA methylation on cytosine(GO:0032776)
0.3 1.1 GO:0009957 epidermal cell fate specification(GO:0009957)
0.3 1.6 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183)
0.3 2.6 GO:0055070 copper ion homeostasis(GO:0055070)
0.3 1.3 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.2 1.5 GO:0007175 negative regulation of epidermal growth factor-activated receptor activity(GO:0007175)
0.2 1.7 GO:0070572 positive regulation of axon regeneration(GO:0048680) positive regulation of neuron projection regeneration(GO:0070572)
0.2 2.8 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.2 3.9 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.2 0.9 GO:2000659 regulation of interleukin-1-mediated signaling pathway(GO:2000659) negative regulation of interleukin-1-mediated signaling pathway(GO:2000660)
0.2 1.4 GO:0033183 negative regulation of histone ubiquitination(GO:0033183) regulation of protein K63-linked ubiquitination(GO:1900044) negative regulation of protein K63-linked ubiquitination(GO:1900045) regulation of histone H2A K63-linked ubiquitination(GO:1901314) negative regulation of histone H2A K63-linked ubiquitination(GO:1901315) regulation of protein polyubiquitination(GO:1902914) negative regulation of protein polyubiquitination(GO:1902915)
0.2 1.6 GO:0006627 protein processing involved in protein targeting to mitochondrion(GO:0006627)
0.2 21.8 GO:0006364 rRNA processing(GO:0006364)
0.2 3.2 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.2 0.4 GO:0045117 azole transport(GO:0045117)
0.2 1.6 GO:1902262 apoptotic process involved in patterning of blood vessels(GO:1902262)
0.2 0.8 GO:1902946 protein localization to early endosome(GO:1902946)
0.2 2.2 GO:0006285 base-excision repair, AP site formation(GO:0006285)
0.2 1.9 GO:0045920 negative regulation of exocytosis(GO:0045920)
0.2 2.2 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.2 1.1 GO:0019184 nonribosomal peptide biosynthetic process(GO:0019184)
0.2 2.5 GO:0045580 regulation of T cell differentiation(GO:0045580)
0.2 5.1 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.2 0.6 GO:0045938 positive regulation of circadian sleep/wake cycle, sleep(GO:0045938)
0.2 1.3 GO:0070933 histone H4 deacetylation(GO:0070933)
0.2 0.6 GO:0089709 L-histidine transmembrane transport(GO:0089709) L-histidine transport(GO:1902024)
0.2 3.5 GO:0035435 phosphate ion transmembrane transport(GO:0035435)
0.2 1.1 GO:0045110 intermediate filament bundle assembly(GO:0045110)
0.1 12.3 GO:0042254 ribosome biogenesis(GO:0042254)
0.1 0.4 GO:0002407 dendritic cell chemotaxis(GO:0002407) dendritic cell migration(GO:0036336)
0.1 0.7 GO:1903361 protein localization to basolateral plasma membrane(GO:1903361)
0.1 5.3 GO:0030199 collagen fibril organization(GO:0030199)
0.1 0.7 GO:0060561 apoptotic process involved in morphogenesis(GO:0060561)
0.1 0.9 GO:0006283 transcription-coupled nucleotide-excision repair(GO:0006283)
0.1 1.2 GO:0042987 beta-amyloid formation(GO:0034205) amyloid precursor protein catabolic process(GO:0042987)
0.1 1.4 GO:0021754 facial nucleus development(GO:0021754)
0.1 1.1 GO:1901998 toxin transport(GO:1901998)
0.1 1.0 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.1 3.2 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.1 0.5 GO:0061469 regulation of type B pancreatic cell proliferation(GO:0061469)
0.1 3.3 GO:0001757 somite specification(GO:0001757)
0.1 0.4 GO:0036076 ligamentous ossification(GO:0036076)
0.1 1.7 GO:0051452 vacuolar acidification(GO:0007035) pH reduction(GO:0045851) intracellular pH reduction(GO:0051452)
0.1 0.7 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 1.3 GO:0038007 netrin-activated signaling pathway(GO:0038007)
0.1 1.0 GO:0006337 nucleosome disassembly(GO:0006337) chromatin disassembly(GO:0031498) protein-DNA complex disassembly(GO:0032986)
0.1 0.3 GO:1990575 mitochondrial ornithine transport(GO:0000066) mitochondrial L-ornithine transmembrane transport(GO:1990575)
0.1 1.4 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.1 0.7 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.1 3.2 GO:0007286 spermatid development(GO:0007286)
0.1 0.8 GO:0090520 sphingolipid mediated signaling pathway(GO:0090520)
0.1 5.2 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 0.7 GO:0034389 lipid particle organization(GO:0034389)
0.1 0.2 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 2.1 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 0.3 GO:0035971 peptidyl-histidine dephosphorylation(GO:0035971)
0.1 0.4 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.1 1.2 GO:0061026 cardiac muscle tissue regeneration(GO:0061026)
0.1 1.8 GO:0008354 germ cell migration(GO:0008354)
0.1 3.5 GO:0061077 chaperone-mediated protein folding(GO:0061077)
0.1 0.3 GO:0071939 vitamin A transport(GO:0071938) vitamin A import(GO:0071939)
0.1 0.7 GO:0044528 regulation of mitochondrial mRNA stability(GO:0044528)
0.1 0.4 GO:0036498 IRE1-mediated unfolded protein response(GO:0036498)
0.1 5.8 GO:0051028 mRNA transport(GO:0051028)
0.1 1.4 GO:0032392 DNA geometric change(GO:0032392) DNA duplex unwinding(GO:0032508)
0.1 2.2 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.1 0.2 GO:0090244 Wnt signaling pathway involved in somitogenesis(GO:0090244)
0.1 1.5 GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process(GO:0036092)
0.1 0.4 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1 0.5 GO:2000576 positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.1 1.5 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.1 0.6 GO:0021588 cerebellum formation(GO:0021588)
0.1 1.3 GO:0021555 midbrain-hindbrain boundary morphogenesis(GO:0021555)
0.1 1.7 GO:0072599 protein targeting to ER(GO:0045047) establishment of protein localization to endoplasmic reticulum(GO:0072599)
0.1 1.5 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.1 1.1 GO:0033173 calcineurin-NFAT signaling cascade(GO:0033173)
0.1 0.6 GO:0006787 porphyrin-containing compound catabolic process(GO:0006787) tetrapyrrole catabolic process(GO:0033015) heme catabolic process(GO:0042167) pigment catabolic process(GO:0046149)
0.1 1.2 GO:0043001 Golgi to plasma membrane protein transport(GO:0043001)
0.1 0.3 GO:1904105 positive regulation of convergent extension involved in gastrulation(GO:1904105)
0.1 0.9 GO:0032094 response to food(GO:0032094)
0.1 2.7 GO:0010212 response to ionizing radiation(GO:0010212)
0.1 3.1 GO:0007019 microtubule depolymerization(GO:0007019)
0.1 0.3 GO:0046952 ketone body catabolic process(GO:0046952)
0.1 1.8 GO:0007632 visual behavior(GO:0007632)
0.1 0.4 GO:0032447 tRNA wobble position uridine thiolation(GO:0002143) protein urmylation(GO:0032447)
0.1 2.9 GO:0002181 cytoplasmic translation(GO:0002181)
0.1 4.2 GO:0030433 ER-associated ubiquitin-dependent protein catabolic process(GO:0030433)
0.1 1.0 GO:0038061 NIK/NF-kappaB signaling(GO:0038061)
0.1 1.3 GO:0090557 establishment of endothelial intestinal barrier(GO:0090557)
0.1 0.2 GO:2000303 regulation of sphingolipid biosynthetic process(GO:0090153) negative regulation of sphingolipid biosynthetic process(GO:0090155) cellular sphingolipid homeostasis(GO:0090156) negative regulation of ceramide biosynthetic process(GO:1900060) regulation of membrane lipid metabolic process(GO:1905038) regulation of ceramide biosynthetic process(GO:2000303)
0.1 0.2 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.1 0.9 GO:0033617 mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.1 1.1 GO:0043535 regulation of blood vessel endothelial cell migration(GO:0043535)
0.1 2.3 GO:0046330 positive regulation of JNK cascade(GO:0046330)
0.1 0.7 GO:0060729 maintenance of gastrointestinal epithelium(GO:0030277) intestinal epithelial structure maintenance(GO:0060729)
0.1 2.4 GO:0030901 midbrain development(GO:0030901)
0.1 5.6 GO:0006401 RNA catabolic process(GO:0006401)
0.1 0.2 GO:0006295 nucleotide-excision repair, DNA incision, 3'-to lesion(GO:0006295)
0.1 0.2 GO:0006116 NADH oxidation(GO:0006116) glycerol-3-phosphate catabolic process(GO:0046168)
0.0 3.5 GO:0007088 regulation of mitotic nuclear division(GO:0007088)
0.0 1.1 GO:0043049 otic placode formation(GO:0043049)
0.0 0.4 GO:0046477 glycosylceramide catabolic process(GO:0046477)
0.0 0.7 GO:0045747 positive regulation of Notch signaling pathway(GO:0045747)
0.0 0.8 GO:0034472 snRNA 3'-end processing(GO:0034472)
0.0 1.4 GO:0032543 mitochondrial translation(GO:0032543)
0.0 1.0 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 1.1 GO:0060059 embryonic retina morphogenesis in camera-type eye(GO:0060059)
0.0 1.4 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.0 2.9 GO:0006413 translational initiation(GO:0006413)
0.0 0.7 GO:0070536 protein K63-linked deubiquitination(GO:0070536)
0.0 0.4 GO:0001522 pseudouridine synthesis(GO:0001522)
0.0 1.4 GO:0035987 endodermal cell differentiation(GO:0035987)
0.0 0.8 GO:0002377 immunoglobulin production(GO:0002377)
0.0 1.8 GO:0015914 phospholipid transport(GO:0015914)
0.0 0.9 GO:0014866 skeletal myofibril assembly(GO:0014866)
0.0 0.3 GO:0050957 equilibrioception(GO:0050957)
0.0 0.9 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.3 GO:0021694 cerebellar Purkinje cell layer formation(GO:0021694) cerebellar Purkinje cell differentiation(GO:0021702)
0.0 0.8 GO:0006509 membrane protein ectodomain proteolysis(GO:0006509)
0.0 1.8 GO:0006261 DNA-dependent DNA replication(GO:0006261)
0.0 0.5 GO:0006003 fructose 2,6-bisphosphate metabolic process(GO:0006003)
0.0 0.7 GO:0030032 lamellipodium assembly(GO:0030032)
0.0 0.7 GO:0045494 photoreceptor cell maintenance(GO:0045494)
0.0 0.1 GO:0051012 microtubule sliding(GO:0051012)
0.0 0.1 GO:0021680 cerebellar Purkinje cell layer development(GO:0021680)
0.0 0.5 GO:0060287 epithelial cilium movement involved in determination of left/right asymmetry(GO:0060287)
0.0 0.7 GO:0035329 hippo signaling(GO:0035329)
0.0 0.3 GO:0060385 axonogenesis involved in innervation(GO:0060385)
0.0 0.7 GO:0006099 tricarboxylic acid cycle(GO:0006099)
0.0 0.6 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.8 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.1 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.0 2.3 GO:0010466 negative regulation of peptidase activity(GO:0010466)
0.0 12.6 GO:0006396 RNA processing(GO:0006396)
0.0 0.6 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.0 0.4 GO:0000077 DNA damage checkpoint(GO:0000077) DNA integrity checkpoint(GO:0031570)
0.0 7.7 GO:0043066 negative regulation of apoptotic process(GO:0043066)
0.0 0.9 GO:0005978 glycogen biosynthetic process(GO:0005978) glucan biosynthetic process(GO:0009250)
0.0 0.3 GO:0043486 histone exchange(GO:0043486)
0.0 0.4 GO:0006491 N-glycan processing(GO:0006491)
0.0 0.6 GO:0060972 left/right pattern formation(GO:0060972)
0.0 0.2 GO:0006265 DNA topological change(GO:0006265)
0.0 0.6 GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling(GO:0043123)
0.0 0.1 GO:0015862 uridine transport(GO:0015862) pyrimidine nucleoside transport(GO:0015864)
0.0 0.7 GO:0002028 regulation of sodium ion transport(GO:0002028)
0.0 2.6 GO:0006412 translation(GO:0006412)
0.0 0.4 GO:0072112 renal filtration cell differentiation(GO:0061318) glomerular epithelium development(GO:0072010) glomerular visceral epithelial cell development(GO:0072015) glomerular visceral epithelial cell differentiation(GO:0072112) glomerular epithelial cell development(GO:0072310) glomerular epithelial cell differentiation(GO:0072311)
0.0 1.8 GO:0001755 neural crest cell migration(GO:0001755)
0.0 0.6 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107)
0.0 0.3 GO:0019835 cytolysis(GO:0019835)
0.0 0.5 GO:0030050 vesicle transport along actin filament(GO:0030050) actin filament-based transport(GO:0099515)
0.0 2.6 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 0.1 GO:0015740 C4-dicarboxylate transport(GO:0015740) acidic amino acid transport(GO:0015800) aspartate transport(GO:0015810) L-glutamate transport(GO:0015813) malate-aspartate shuttle(GO:0043490)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
2.0 8.2 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
1.9 7.5 GO:0097268 cytoophidium(GO:0097268)
1.3 6.7 GO:0031515 tRNA (m1A) methyltransferase complex(GO:0031515)
1.2 4.8 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.9 2.8 GO:0070545 PeBoW complex(GO:0070545)
0.8 3.1 GO:0061673 mitotic spindle astral microtubule(GO:0061673)
0.7 9.0 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.7 2.0 GO:0034457 Mpp10 complex(GO:0034457)
0.6 4.2 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.6 4.5 GO:0009295 nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645)
0.6 2.8 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.5 1.9 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.5 5.4 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.5 2.7 GO:0070876 SOSS complex(GO:0070876)
0.4 7.5 GO:0030686 90S preribosome(GO:0030686)
0.4 5.7 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.4 1.5 GO:0035327 transcriptionally active chromatin(GO:0035327)
0.4 2.2 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.4 4.0 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.4 1.8 GO:0070724 BMP receptor complex(GO:0070724)
0.4 1.8 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.3 1.7 GO:0070390 transcription export complex 2(GO:0070390)
0.3 1.7 GO:0000839 Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.3 1.4 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.3 1.4 GO:0005655 nucleolar ribonuclease P complex(GO:0005655)
0.3 1.4 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.3 1.3 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.3 1.6 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.2 2.0 GO:0000796 condensin complex(GO:0000796)
0.2 0.7 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.2 3.5 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.2 3.7 GO:0005869 dynactin complex(GO:0005869)
0.2 2.0 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.2 2.0 GO:0000177 cytoplasmic exosome (RNase complex)(GO:0000177)
0.2 12.0 GO:0005643 nuclear pore(GO:0005643)
0.2 3.1 GO:0036038 MKS complex(GO:0036038)
0.2 1.1 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.2 49.3 GO:0005730 nucleolus(GO:0005730)
0.2 1.5 GO:0031616 spindle pole centrosome(GO:0031616)
0.2 0.7 GO:0048269 methionine adenosyltransferase complex(GO:0048269)
0.2 0.7 GO:0097025 MPP7-DLG1-LIN7 complex(GO:0097025)
0.2 1.7 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.2 3.7 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.2 1.1 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.1 2.1 GO:0015030 Cajal body(GO:0015030)
0.1 2.5 GO:0042555 MCM complex(GO:0042555)
0.1 0.4 GO:1990604 IRE1-TRAF2-ASK1 complex(GO:1990604)
0.1 6.0 GO:0000315 organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762)
0.1 0.9 GO:0032797 SMN complex(GO:0032797)
0.1 0.4 GO:0033391 chromatoid body(GO:0033391)
0.1 1.8 GO:0032391 photoreceptor connecting cilium(GO:0032391)
0.1 2.5 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 0.5 GO:0043540 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex(GO:0043540)
0.1 1.9 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.1 3.4 GO:0005791 rough endoplasmic reticulum(GO:0005791)
0.1 1.1 GO:0045095 keratin filament(GO:0045095)
0.1 1.5 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.1 1.8 GO:0043596 nuclear replication fork(GO:0043596)
0.1 0.9 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 1.1 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.1 2.2 GO:0005839 proteasome core complex(GO:0005839)
0.1 2.2 GO:0031672 A band(GO:0031672)
0.1 1.7 GO:0071565 nBAF complex(GO:0071565)
0.1 1.4 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.1 2.1 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 0.2 GO:0035339 SPOTS complex(GO:0035339)
0.1 0.9 GO:0016514 SWI/SNF complex(GO:0016514)
0.1 0.8 GO:0071339 MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)
0.1 0.6 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.1 0.8 GO:0033202 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.0 2.7 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 1.9 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.8 GO:0032039 integrator complex(GO:0032039)
0.0 3.9 GO:0000776 kinetochore(GO:0000776)
0.0 0.2 GO:0030877 beta-catenin destruction complex(GO:0030877)
0.0 3.5 GO:0005581 collagen trimer(GO:0005581)
0.0 0.3 GO:0097346 Swr1 complex(GO:0000812) INO80-type complex(GO:0097346)
0.0 0.9 GO:0000313 organellar ribosome(GO:0000313) mitochondrial ribosome(GO:0005761)
0.0 0.2 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.2 GO:0005686 U2 snRNP(GO:0005686)
0.0 1.1 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.0 3.9 GO:0043296 apical junction complex(GO:0043296)
0.0 0.6 GO:0030131 clathrin adaptor complex(GO:0030131)
0.0 2.6 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.7 GO:0016605 PML body(GO:0016605)
0.0 0.3 GO:0035869 ciliary transition zone(GO:0035869)
0.0 0.3 GO:0031680 G-protein beta/gamma-subunit complex(GO:0031680)
0.0 1.8 GO:0005840 ribosome(GO:0005840)
0.0 2.2 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.0 0.9 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.2 GO:0044545 NSL complex(GO:0044545)
0.0 0.6 GO:0030864 cortical actin cytoskeleton(GO:0030864)
0.0 0.9 GO:0005942 phosphatidylinositol 3-kinase complex(GO:0005942)
0.0 0.5 GO:0005902 microvillus(GO:0005902)
0.0 0.9 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 13.5 GO:0005829 cytosol(GO:0005829)
0.0 3.8 GO:1990904 ribonucleoprotein complex(GO:1990904)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.5 7.4 GO:0071885 N-terminal protein N-methyltransferase activity(GO:0071885)
2.3 9.2 GO:0004639 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity(GO:0004639)
1.9 7.5 GO:0003883 CTP synthase activity(GO:0003883)
1.5 4.5 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
1.4 9.7 GO:0016426 tRNA (adenine) methyltransferase activity(GO:0016426)
1.1 3.2 GO:0016743 carboxyl- or carbamoyltransferase activity(GO:0016743)
1.0 3.0 GO:0016434 rRNA (cytosine) methyltransferase activity(GO:0016434)
0.9 5.7 GO:0003938 IMP dehydrogenase activity(GO:0003938)
0.8 2.3 GO:0072591 N-acetyl-L-aspartate-L-glutamate ligase activity(GO:0072590) citrate-L-glutamate ligase activity(GO:0072591)
0.7 2.7 GO:0034511 U3 snoRNA binding(GO:0034511)
0.6 1.9 GO:0035243 protein-arginine omega-N symmetric methyltransferase activity(GO:0035243)
0.6 1.9 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.6 1.8 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.6 3.0 GO:0090556 phospholipid-translocating ATPase activity(GO:0004012) phosphatidylcholine-translocating ATPase activity(GO:0090554) phosphatidylserine-translocating ATPase activity(GO:0090556)
0.5 1.5 GO:0047690 aspartyltransferase activity(GO:0047690)
0.5 5.8 GO:0019238 cyclohydrolase activity(GO:0019238)
0.5 2.4 GO:0031708 endothelin B receptor binding(GO:0031708)
0.4 2.7 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.4 5.6 GO:0030515 snoRNA binding(GO:0030515)
0.4 2.0 GO:0004001 adenosine kinase activity(GO:0004001)
0.4 2.0 GO:0016531 copper chaperone activity(GO:0016531)
0.4 2.6 GO:0050072 m7G(5')pppN diphosphatase activity(GO:0050072)
0.4 1.1 GO:0016019 peptidoglycan receptor activity(GO:0016019)
0.4 7.0 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.4 1.1 GO:0004422 hypoxanthine phosphoribosyltransferase activity(GO:0004422)
0.3 1.4 GO:0033204 ribonuclease P RNA binding(GO:0033204)
0.3 1.3 GO:0050211 procollagen galactosyltransferase activity(GO:0050211)
0.3 1.3 GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity(GO:0003865) steroid dehydrogenase activity, acting on the CH-CH group of donors(GO:0033765) enone reductase activity(GO:0035671) cholestenone 5-alpha-reductase activity(GO:0047751)
0.3 4.5 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.3 1.5 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.3 1.2 GO:0034416 bisphosphoglycerate phosphatase activity(GO:0034416)
0.3 4.6 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.3 1.4 GO:0004565 beta-galactosidase activity(GO:0004565)
0.3 0.8 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.3 1.1 GO:0033745 L-methionine-(R)-S-oxide reductase activity(GO:0033745)
0.3 0.8 GO:0003913 DNA photolyase activity(GO:0003913)
0.3 3.4 GO:0008320 protein transmembrane transporter activity(GO:0008320)
0.3 0.8 GO:1902945 metalloendopeptidase activity involved in amyloid precursor protein catabolic process(GO:1902945)
0.3 12.3 GO:0043022 ribosome binding(GO:0043022)
0.2 2.2 GO:0008263 mismatch base pair DNA N-glycosylase activity(GO:0000700) pyrimidine-specific mismatch base pair DNA N-glycosylase activity(GO:0008263)
0.2 0.7 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.2 3.5 GO:0051879 Hsp90 protein binding(GO:0051879)
0.2 1.4 GO:0019158 glucokinase activity(GO:0004340) hexokinase activity(GO:0004396) glucose binding(GO:0005536) fructokinase activity(GO:0008865) mannokinase activity(GO:0019158)
0.2 3.5 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.2 1.6 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.2 1.1 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.2 0.9 GO:0004373 glycogen (starch) synthase activity(GO:0004373)
0.2 0.4 GO:1901474 azole transporter activity(GO:0045118) azole transmembrane transporter activity(GO:1901474)
0.2 2.1 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.2 1.5 GO:1990050 phosphatidic acid transporter activity(GO:1990050)
0.2 1.0 GO:0004385 guanylate kinase activity(GO:0004385)
0.2 3.1 GO:0043015 gamma-tubulin binding(GO:0043015)
0.2 1.7 GO:0072320 volume-sensitive chloride channel activity(GO:0072320)
0.2 1.1 GO:0019215 intermediate filament binding(GO:0019215)
0.2 0.7 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.2 0.7 GO:0097016 L27 domain binding(GO:0097016)
0.2 7.3 GO:0016831 carboxy-lyase activity(GO:0016831)
0.2 4.7 GO:0034062 DNA-directed RNA polymerase activity(GO:0003899) RNA polymerase activity(GO:0034062)
0.2 1.5 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.2 2.8 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.2 13.3 GO:0003724 RNA helicase activity(GO:0003724)
0.1 1.8 GO:0005025 transforming growth factor beta receptor activity, type I(GO:0005025)
0.1 2.8 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 4.1 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.1 2.0 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 1.4 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 1.6 GO:0005111 type 2 fibroblast growth factor receptor binding(GO:0005111)
0.1 1.5 GO:0052812 phosphatidylinositol-4,5-bisphosphate 3-kinase activity(GO:0046934) phosphatidylinositol-3,4-bisphosphate 5-kinase activity(GO:0052812)
0.1 1.6 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 3.4 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.1 1.3 GO:0005042 netrin receptor activity(GO:0005042)
0.1 0.8 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 0.7 GO:0097027 ubiquitin-protein transferase activator activity(GO:0097027)
0.1 0.6 GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity(GO:0003980)
0.1 2.2 GO:0070003 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.1 2.8 GO:0043021 ribonucleoprotein complex binding(GO:0043021)
0.1 0.8 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.1 1.7 GO:0051117 ATPase binding(GO:0051117)
0.1 2.4 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.1 0.7 GO:0004356 glutamate-ammonia ligase activity(GO:0004356) ammonia ligase activity(GO:0016211) acid-ammonia (or amide) ligase activity(GO:0016880)
0.1 1.4 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 1.3 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.1 1.9 GO:0070122 isopeptidase activity(GO:0070122)
0.1 1.0 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.1 2.1 GO:0102336 fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.7 GO:0035173 histone kinase activity(GO:0035173)
0.1 0.6 GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.1 3.1 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 1.2 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.1 0.9 GO:0061578 Lys63-specific deubiquitinase activity(GO:0061578)
0.1 6.0 GO:0003697 single-stranded DNA binding(GO:0003697)
0.1 8.8 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.1 3.0 GO:0005109 frizzled binding(GO:0005109)
0.1 0.3 GO:0101006 protein histidine phosphatase activity(GO:0101006)
0.1 0.4 GO:0008142 oxysterol binding(GO:0008142)
0.1 0.2 GO:0046964 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity(GO:0046964)
0.1 0.8 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 2.1 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.1 1.2 GO:0016846 carbon-sulfur lyase activity(GO:0016846)
0.1 1.6 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.1 0.3 GO:0008260 3-oxoacid CoA-transferase activity(GO:0008260)
0.1 13.2 GO:0042393 histone binding(GO:0042393)
0.1 0.5 GO:0072518 Rho-dependent protein serine/threonine kinase activity(GO:0072518)
0.1 1.6 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.1 0.8 GO:0004017 adenylate kinase activity(GO:0004017)
0.1 1.8 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.1 0.6 GO:0030544 Hsp70 protein binding(GO:0030544)
0.1 0.9 GO:0016879 ligase activity, forming carbon-nitrogen bonds(GO:0016879)
0.1 0.8 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.1 0.2 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 9.1 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.4 GO:0003828 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity(GO:0003828)
0.0 1.0 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 5.8 GO:0005201 extracellular matrix structural constituent(GO:0005201)
0.0 0.6 GO:0070530 K63-linked polyubiquitin binding(GO:0070530)
0.0 1.9 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 3.0 GO:0016279 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.0 0.3 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
0.0 0.4 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.0 1.2 GO:0005540 hyaluronic acid binding(GO:0005540)
0.0 0.9 GO:0001103 RNA polymerase II repressing transcription factor binding(GO:0001103)
0.0 0.3 GO:0034632 retinol transporter activity(GO:0034632)
0.0 0.8 GO:0008143 poly(A) binding(GO:0008143)
0.0 2.7 GO:0004386 helicase activity(GO:0004386)
0.0 0.9 GO:0008094 DNA-dependent ATPase activity(GO:0008094)
0.0 0.4 GO:0016783 sulfurtransferase activity(GO:0016783)
0.0 2.8 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 2.1 GO:0043130 ubiquitin binding(GO:0043130)
0.0 0.5 GO:0003873 6-phosphofructo-2-kinase activity(GO:0003873) fructose-2,6-bisphosphate 2-phosphatase activity(GO:0004331)
0.0 5.0 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 2.2 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 1.1 GO:0050840 extracellular matrix binding(GO:0050840)
0.0 0.3 GO:0019843 rRNA binding(GO:0019843)
0.0 0.2 GO:0008118 N-acetyllactosaminide alpha-2,3-sialyltransferase activity(GO:0008118)
0.0 1.8 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.4 GO:0031078 histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041)
0.0 1.4 GO:0004521 endoribonuclease activity(GO:0004521)
0.0 1.9 GO:0004518 nuclease activity(GO:0004518)
0.0 0.5 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.0 1.4 GO:0005507 copper ion binding(GO:0005507)
0.0 0.2 GO:0035035 histone acetyltransferase binding(GO:0035035)
0.0 0.6 GO:0051020 GTPase binding(GO:0051020)
0.0 16.8 GO:0003723 RNA binding(GO:0003723)
0.0 2.1 GO:0042803 protein homodimerization activity(GO:0042803)
0.0 0.3 GO:0031726 CCR1 chemokine receptor binding(GO:0031726) CCR4 chemokine receptor binding(GO:0031729) CCR5 chemokine receptor binding(GO:0031730)
0.0 10.2 GO:0005525 GTP binding(GO:0005525)
0.0 0.7 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.2 GO:0003917 DNA topoisomerase activity(GO:0003916) DNA topoisomerase type I activity(GO:0003917)
0.0 0.4 GO:0016854 racemase and epimerase activity(GO:0016854)
0.0 0.8 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.6 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 1.0 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.3 GO:0031681 G-protein beta-subunit binding(GO:0031681)
0.0 0.5 GO:0045505 dynein intermediate chain binding(GO:0045505)
0.0 5.2 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 0.9 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.4 GO:0042826 histone deacetylase binding(GO:0042826)
0.0 0.4 GO:0017147 Wnt-protein binding(GO:0017147)
0.0 0.8 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.5 GO:0030898 actin-dependent ATPase activity(GO:0030898)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 2.7 PID SMAD2 3PATHWAY Regulation of cytoplasmic and nuclear SMAD2/3 signaling
0.2 10.2 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.1 1.7 PID ERB GENOMIC PATHWAY Validated nuclear estrogen receptor beta network
0.1 1.3 PID RETINOIC ACID PATHWAY Retinoic acid receptors-mediated signaling
0.1 1.3 PID WNT NONCANONICAL PATHWAY Noncanonical Wnt signaling pathway
0.1 1.5 PID TRAIL PATHWAY TRAIL signaling pathway
0.1 0.9 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.0 1.2 PID ATM PATHWAY ATM pathway
0.0 1.3 PID ANGIOPOIETIN RECEPTOR PATHWAY Angiopoietin receptor Tie2-mediated signaling
0.0 1.4 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 2.8 PID TELOMERASE PATHWAY Regulation of Telomerase
0.0 1.3 PID NETRIN PATHWAY Netrin-mediated signaling events
0.0 1.0 PID ERBB2 ERBB3 PATHWAY ErbB2/ErbB3 signaling events
0.0 0.8 PID CERAMIDE PATHWAY Ceramide signaling pathway
0.0 2.1 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.9 PID AJDISS 2PATHWAY Posttranslational regulation of adherens junction stability and dissassembly
0.0 0.6 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.6 PID HNF3A PATHWAY FOXA1 transcription factor network
0.0 0.7 PID HEDGEHOG GLI PATHWAY Hedgehog signaling events mediated by Gli proteins
0.0 0.3 PID WNT CANONICAL PATHWAY Canonical Wnt signaling pathway
0.0 3.7 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.0 1.6 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.0 0.8 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.0 0.2 PID FRA PATHWAY Validated transcriptional targets of AP1 family members Fra1 and Fra2
0.0 0.4 PID ILK PATHWAY Integrin-linked kinase signaling
0.0 0.2 PID PRL SIGNALING EVENTS PATHWAY Signaling events mediated by PRL

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 18.4 REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS Genes involved in Purine ribonucleoside monophosphate biosynthesis
0.6 9.0 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.4 4.7 REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE Genes involved in mRNA Decay by 3' to 5' Exoribonuclease
0.4 11.8 REACTOME PTM GAMMA CARBOXYLATION HYPUSINE FORMATION AND ARYLSULFATASE ACTIVATION Genes involved in PTM: gamma carboxylation, hypusine formation and arylsulfatase activation
0.4 7.9 REACTOME PYRIMIDINE METABOLISM Genes involved in Pyrimidine metabolism
0.3 5.0 REACTOME RNA POL III TRANSCRIPTION TERMINATION Genes involved in RNA Polymerase III Transcription Termination
0.3 4.6 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.2 7.4 REACTOME EXTENSION OF TELOMERES Genes involved in Extension of Telomeres
0.2 2.4 REACTOME TRANSCRIPTION COUPLED NER TC NER Genes involved in Transcription-coupled NER (TC-NER)
0.2 5.6 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.2 1.4 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.2 3.2 REACTOME RNA POL I TRANSCRIPTION TERMINATION Genes involved in RNA Polymerase I Transcription Termination
0.1 3.1 REACTOME KINESINS Genes involved in Kinesins
0.1 1.3 REACTOME ANDROGEN BIOSYNTHESIS Genes involved in Androgen biosynthesis
0.1 1.9 REACTOME ZINC TRANSPORTERS Genes involved in Zinc transporters
0.1 1.2 REACTOME HYALURONAN UPTAKE AND DEGRADATION Genes involved in Hyaluronan uptake and degradation
0.1 1.3 REACTOME ROLE OF DCC IN REGULATING APOPTOSIS Genes involved in Role of DCC in regulating apoptosis
0.1 1.8 REACTOME RESOLUTION OF AP SITES VIA THE SINGLE NUCLEOTIDE REPLACEMENT PATHWAY Genes involved in Resolution of AP sites via the single-nucleotide replacement pathway
0.1 1.1 REACTOME PURINE SALVAGE Genes involved in Purine salvage
0.1 5.7 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.1 7.7 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 2.8 REACTOME TIE2 SIGNALING Genes involved in Tie2 Signaling
0.1 1.2 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.1 2.8 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 1.3 REACTOME METABOLISM OF PORPHYRINS Genes involved in Metabolism of porphyrins
0.1 1.1 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 2.1 REACTOME INTERFERON ALPHA BETA SIGNALING Genes involved in Interferon alpha/beta signaling
0.1 1.0 REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression
0.1 4.5 REACTOME LATE PHASE OF HIV LIFE CYCLE Genes involved in Late Phase of HIV Life Cycle
0.1 1.4 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.1 3.0 REACTOME DESTABILIZATION OF MRNA BY AUF1 HNRNP D0 Genes involved in Destabilization of mRNA by AUF1 (hnRNP D0)
0.1 1.3 REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA Genes involved in Circadian Repression of Expression by REV-ERBA
0.1 1.1 REACTOME TRANSPORT OF MATURE TRANSCRIPT TO CYTOPLASM Genes involved in Transport of Mature Transcript to Cytoplasm
0.1 1.0 REACTOME PRE NOTCH PROCESSING IN GOLGI Genes involved in Pre-NOTCH Processing in Golgi
0.1 0.7 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.1 0.9 REACTOME SIGNALING BY FGFR1 FUSION MUTANTS Genes involved in Signaling by FGFR1 fusion mutants
0.1 0.8 REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS Genes involved in Activation of ATR in response to replication stress
0.1 2.6 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.0 1.4 REACTOME CYTOSOLIC TRNA AMINOACYLATION Genes involved in Cytosolic tRNA aminoacylation
0.0 3.5 REACTOME PEPTIDE CHAIN ELONGATION Genes involved in Peptide chain elongation
0.0 0.6 REACTOME IRAK2 MEDIATED ACTIVATION OF TAK1 COMPLEX UPON TLR7 8 OR 9 STIMULATION Genes involved in IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation
0.0 0.7 REACTOME MITOCHONDRIAL FATTY ACID BETA OXIDATION Genes involved in Mitochondrial Fatty Acid Beta-Oxidation
0.0 1.3 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane
0.0 0.9 REACTOME SMOOTH MUSCLE CONTRACTION Genes involved in Smooth Muscle Contraction
0.0 0.8 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
0.0 0.2 REACTOME CTNNB1 PHOSPHORYLATION CASCADE Genes involved in Beta-catenin phosphorylation cascade
0.0 0.7 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC
0.0 0.4 REACTOME SYNTHESIS OF PIPS AT THE LATE ENDOSOME MEMBRANE Genes involved in Synthesis of PIPs at the late endosome membrane
0.0 0.3 REACTOME COMMON PATHWAY Genes involved in Common Pathway
0.0 0.8 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.0 2.2 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.0 0.9 REACTOME ION TRANSPORT BY P TYPE ATPASES Genes involved in Ion transport by P-type ATPases
0.0 0.3 REACTOME G ALPHA1213 SIGNALLING EVENTS Genes involved in G alpha (12/13) signalling events
0.0 0.8 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.0 0.2 REACTOME HS GAG DEGRADATION Genes involved in HS-GAG degradation