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PRJEB1986: zebrafish developmental stages transcriptome

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Results for zbtb3

Z-value: 0.55

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Transcription factors associated with zbtb3

Gene Symbol Gene ID Gene Info
zbtb3
ENSDARG00000036235 zinc finger and BTB domain containing 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
zbtb3dr11_v1_chr14_+_35405518_35405518-0.361.2e-01Click!

Activity profile of zbtb3 motif

Sorted Z-values of zbtb3 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr1_+_52398205 2.93 ENSDART00000143225
si:ch211-217k17.9
si:ch211-217k17.9
chr3_-_61185746 2.00 ENSDART00000028219
pvalb4
parvalbumin 4
chr7_-_34225011 1.87 ENSDART00000049588
crybgx
crystallin beta gamma X
chr2_+_45643122 1.75 ENSDART00000138179
fndc7rs4
fibronectin type III domain containing 7, related sequence 4
chr2_-_27329214 1.30 ENSDART00000145835
tmx3a
thioredoxin related transmembrane protein 3a
chr16_-_24598042 0.98 ENSDART00000156407
ENSDART00000154072
si:dkey-56f14.4
si:dkey-56f14.4
chr13_-_2215213 0.95 ENSDART00000129773
mlip
muscular LMNA-interacting protein
chr24_-_26383978 0.86 ENSDART00000031426
skilb
SKI-like proto-oncogene b
chr7_-_26087807 0.83 ENSDART00000052989
ache
acetylcholinesterase
chr12_+_10116912 0.82 ENSDART00000189630
si:dkeyp-118b1.2
si:dkeyp-118b1.2
chr2_-_985417 0.77 ENSDART00000140540
si:ch211-241e1.3
si:ch211-241e1.3
chr16_-_42872571 0.68 ENSDART00000154757
ENSDART00000102345
txnipb
thioredoxin interacting protein b
chr2_+_5621529 0.67 ENSDART00000144187
fgf12a
fibroblast growth factor 12a
chr6_-_38419318 0.62 ENSDART00000138026
gabra5
gamma-aminobutyric acid (GABA) A receptor, alpha 5
chr15_-_12113045 0.62 ENSDART00000159879
dscaml1
Down syndrome cell adhesion molecule like 1
chr1_+_44814322 0.61 ENSDART00000059227
ndufs8a
NADH dehydrogenase (ubiquinone) Fe-S protein 8a
chr1_-_22687913 0.58 ENSDART00000168171
fgfbp2b
fibroblast growth factor binding protein 2b
chr3_+_24458899 0.57 ENSDART00000156655
cbx6b
chromobox homolog 6b
chr22_-_29336268 0.56 ENSDART00000132776
ENSDART00000186351
ENSDART00000121599
pdgfba
platelet-derived growth factor beta polypeptide a
chr7_-_36358735 0.53 ENSDART00000188392
fto
fat mass and obesity associated
chr8_-_54304381 0.52 ENSDART00000184177
RHO (1 of many)
rhodopsin
chr3_+_61185660 0.50 ENSDART00000167114
CR352263.1

chr9_+_14023386 0.46 ENSDART00000140199
ENSDART00000124267
si:ch211-67e16.4
si:ch211-67e16.4
chr19_+_25478203 0.45 ENSDART00000132934
col28a1a
collagen, type XXVIII, alpha 1a
chr16_+_34531486 0.43 ENSDART00000043291
paqr7b
progestin and adipoQ receptor family member VII, b
chr25_-_35542739 0.42 ENSDART00000097651
si:ch211-87j1.4
si:ch211-87j1.4
chr3_-_24458281 0.41 ENSDART00000153993
baiap2l2a
BAI1-associated protein 2-like 2a
chr6_-_39006449 0.41 ENSDART00000150885
vdrb
vitamin D receptor b
chr17_+_30450163 0.40 ENSDART00000104257
lpin1
lipin 1
chr15_-_576135 0.40 ENSDART00000124170
cbln20
cerebellin 20
chr7_-_6592142 0.39 ENSDART00000160137
kcnj10a
potassium inwardly-rectifying channel, subfamily J, member 10a
chr23_+_39558508 0.39 ENSDART00000017902
camk1gb
calcium/calmodulin-dependent protein kinase IGb
chr8_+_3820134 0.35 ENSDART00000122454
citb
citron rho-interacting serine/threonine kinase b
chr10_-_4375190 0.34 ENSDART00000016102
CABZ01073795.1

chr16_-_32013913 0.33 ENSDART00000030282
ENSDART00000138701
gstk1
glutathione S-transferase kappa 1
chr15_+_863931 0.33 ENSDART00000154083
si:dkey-7i4.12
si:dkey-7i4.12
chr11_+_1805421 0.32 ENSDART00000173143
lrp1aa
low density lipoprotein receptor-related protein 1Aa
chr6_+_7507390 0.32 ENSDART00000149285
erbb3a
erb-b2 receptor tyrosine kinase 3a
chr2_+_15776408 0.31 ENSDART00000176628
vav3b
vav 3 guanine nucleotide exchange factor b
chr14_-_32258759 0.31 ENSDART00000052949
fgf13a
fibroblast growth factor 13a
chr7_-_57949117 0.29 ENSDART00000138803
ank2b
ankyrin 2b, neuronal
chr2_+_45484183 0.28 ENSDART00000183490
si:ch211-66k16.28
si:ch211-66k16.28
chr24_+_12740848 0.27 ENSDART00000060825
si:ch211-196f5.2
si:ch211-196f5.2
chr22_-_25469751 0.27 ENSDART00000171670
CR769772.4

chr7_-_12789251 0.26 ENSDART00000052750
adamtsl3
ADAMTS-like 3
chr11_+_10548171 0.26 ENSDART00000191497
b3gnt5a
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a
chr3_+_24458204 0.25 ENSDART00000155028
ENSDART00000153551
cbx6b
chromobox homolog 6b
chr3_+_49397115 0.25 ENSDART00000176042
tecra
trans-2,3-enoyl-CoA reductase a
chr1_-_44704261 0.25 ENSDART00000133210
si:dkey-28b4.8
si:dkey-28b4.8
chr22_-_25502977 0.22 ENSDART00000181749
CR769772.4

chr1_+_59007536 0.21 ENSDART00000165339
CDC37
cell division cycle 37
chr8_+_54135642 0.21 ENSDART00000170712
brpf1
bromodomain and PHD finger containing, 1
chr7_-_48263516 0.21 ENSDART00000006619
ENSDART00000142370
ENSDART00000148273
ENSDART00000147968
rbpms2b
RNA binding protein with multiple splicing 2b
chr17_-_29311835 0.20 ENSDART00000104224
tecpr2
tectonin beta-propeller repeat containing 2
chr23_+_6232895 0.20 ENSDART00000139795
syt2a
synaptotagmin IIa
chr12_+_48220584 0.20 ENSDART00000164392
lrrc20
leucine rich repeat containing 20
chr1_+_532766 0.20 ENSDART00000179731
ENSDART00000060944
mrpl39
mitochondrial ribosomal protein L39
chr7_+_33279618 0.20 ENSDART00000173706
coro2ba
coronin, actin binding protein, 2Ba
chr21_-_4923427 0.19 ENSDART00000181489
kcnt1
potassium channel, subfamily T, member 1
chr1_-_633356 0.18 ENSDART00000171019
appa
amyloid beta (A4) precursor protein a
chr21_+_45366229 0.18 ENSDART00000029946
ube2b
ubiquitin-conjugating enzyme E2B (RAD6 homolog)
chr10_+_44641599 0.18 ENSDART00000172128
sez6l
seizure related 6 homolog (mouse)-like
chr5_+_43458304 0.18 ENSDART00000051114
rhobtb2a
Rho-related BTB domain containing 2a
chr16_+_13898399 0.17 ENSDART00000140946
si:ch211-149k23.9
si:ch211-149k23.9
chr7_+_24522308 0.17 ENSDART00000173542
btr09
bloodthirsty-related gene family, member 9
chr7_+_34492744 0.16 ENSDART00000109635
ENSDART00000173844
calml4a
calmodulin-like 4a
chr11_-_42230491 0.16 ENSDART00000164423
CABZ01030862.1

chr2_+_47718605 0.16 ENSDART00000189180
ENSDART00000148824
mbnl1
muscleblind-like splicing regulator 1
chr19_+_40122370 0.16 ENSDART00000151276
si:ch211-173p18.3
si:ch211-173p18.3
chr14_+_6546516 0.14 ENSDART00000097214
adam19b
ADAM metallopeptidase domain 19b
chr24_-_24146875 0.13 ENSDART00000173052
map7d2b
MAP7 domain containing 2b
chr18_-_43880020 0.13 ENSDART00000185638
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6
chr13_+_23282549 0.12 ENSDART00000101134
khdrbs2
KH domain containing, RNA binding, signal transduction associated 2
chr18_+_37015185 0.12 ENSDART00000191305
sipa1l3
signal-induced proliferation-associated 1 like 3
chr2_+_31454562 0.11 ENSDART00000136360
TMEM236
si:dkey-32m20.1
chr3_-_5353442 0.11 ENSDART00000188808
trim35-7
tripartite motif containing 35-7
chr19_+_917852 0.11 ENSDART00000082466
tgfbr2a
transforming growth factor beta receptor 2a
chr3_-_3019979 0.11 ENSDART00000111174
zgc:172090
zgc:172090
chr13_+_771403 0.10 ENSDART00000093166
nrxn1b
neurexin 1b
chr2_-_54639964 0.10 ENSDART00000100103
acss2l
acyl-CoA synthetase short chain family member 2 like
chr19_+_42770041 0.10 ENSDART00000150930
clasp2
cytoplasmic linker associated protein 2
chr23_-_15878879 0.09 ENSDART00000010119
eef1a2
eukaryotic translation elongation factor 1 alpha 2
chr22_-_11136625 0.09 ENSDART00000016873
ENSDART00000125561
atp6ap2
ATPase H+ transporting accessory protein 2
chr20_-_6131686 0.09 ENSDART00000145964
ENSDART00000086578
ENSDART00000164090
pum2
pumilio RNA-binding family member 2
chr2_+_15776649 0.09 ENSDART00000156535
vav3b
vav 3 guanine nucleotide exchange factor b
chr15_-_2632891 0.09 ENSDART00000081840
cldnj
claudin j
chr21_-_11791909 0.09 ENSDART00000180893
RHOBTB3
si:dkey-6b12.5
chr2_+_68789 0.08 ENSDART00000058569
cldn1
claudin 1
chr9_+_307863 0.08 ENSDART00000163474
stac3
SH3 and cysteine rich domain 3
chr9_-_18814737 0.08 ENSDART00000131267
tsc22d1
TSC22 domain family, member 1
chr7_+_39079071 0.08 ENSDART00000181845
dgkza
diacylglycerol kinase, zeta a
chr18_+_7611298 0.07 ENSDART00000062156
odf3b
outer dense fiber of sperm tails 3B
chr22_-_5051689 0.07 ENSDART00000113521
matk
megakaryocyte-associated tyrosine kinase
chr7_+_29005622 0.06 ENSDART00000170162
CR376738.2

chr23_-_32404022 0.06 ENSDART00000156387
ENSDART00000155508
si:ch211-66i15.4
si:ch211-66i15.4
chr17_-_868004 0.05 ENSDART00000112803
wdr20a
WD repeat domain 20a
chr22_+_3238474 0.05 ENSDART00000157954
si:ch1073-178p5.3
si:ch1073-178p5.3
chr17_-_36841981 0.05 ENSDART00000131566
myo6b
myosin VIb
chr4_-_68913650 0.04 ENSDART00000184297
si:dkey-264f17.5
si:dkey-264f17.5
chr17_+_52524452 0.04 ENSDART00000016614
dlst
dihydrolipoamide S-succinyltransferase
chr6_+_58698475 0.03 ENSDART00000056138
igsf8
immunoglobulin superfamily, member 8
chr17_-_36842267 0.03 ENSDART00000042203
ENSDART00000176989
myo6b
myosin VIb
chr3_+_17456428 0.03 ENSDART00000090676
ENSDART00000182082
si:ch211-210g13.5
si:ch211-210g13.5
chr1_+_58079053 0.03 ENSDART00000141678
si:ch211-114l13.3
si:ch211-114l13.3
chr8_-_8446668 0.03 ENSDART00000132700
cdk16
cyclin-dependent kinase 16
chr16_-_30969294 0.02 ENSDART00000147890
dgat1b
diacylglycerol O-acyltransferase 1b
chr14_+_1355857 0.02 ENSDART00000188008
bbs12
Bardet-Biedl syndrome 12
chr13_+_22964868 0.02 ENSDART00000142129
tacr2
tachykinin receptor 2
chr14_-_33858214 0.02 ENSDART00000112268
ocrl
oculocerebrorenal syndrome of Lowe
chr20_+_27713210 0.01 ENSDART00000132222
zbtb1
zinc finger and BTB domain containing 1
chr7_+_30051488 0.01 ENSDART00000169410
pstpip1b
proline-serine-threonine phosphatase interacting protein 1b
chr15_-_19705707 0.00 ENSDART00000047643
sytl2b
synaptotagmin-like 2b

Network of associatons between targets according to the STRING database.

First level regulatory network of zbtb3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 GO:0018171 peptidyl-cysteine oxidation(GO:0018171)
0.2 0.8 GO:0008291 acetylcholine metabolic process(GO:0008291) acetate ester metabolic process(GO:1900619)
0.2 0.5 GO:0042245 RNA repair(GO:0042245)
0.1 1.0 GO:1905150 regulation of voltage-gated sodium channel activity(GO:1905150)
0.1 0.6 GO:0031954 positive regulation of protein autophosphorylation(GO:0031954)
0.1 0.3 GO:0036371 protein localization to T-tubule(GO:0036371)
0.1 0.4 GO:0036268 swimming(GO:0036268)
0.1 0.4 GO:0045475 locomotor rhythm(GO:0045475)
0.0 0.4 GO:2000251 positive regulation of actin cytoskeleton reorganization(GO:2000251)
0.0 0.2 GO:0051148 smooth muscle cell differentiation(GO:0051145) negative regulation of muscle cell differentiation(GO:0051148)
0.0 0.6 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.9 GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway(GO:0030512) negative regulation of cellular response to transforming growth factor beta stimulus(GO:1903845)
0.0 0.6 GO:0051932 synaptic transmission, GABAergic(GO:0051932)
0.0 0.6 GO:0070593 dendrite self-avoidance(GO:0070593)
0.0 0.4 GO:0001556 oocyte maturation(GO:0001556)
0.0 0.1 GO:0031174 lifelong otolith mineralization(GO:0031174)
0.0 0.1 GO:0019427 acetate metabolic process(GO:0006083) acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.0 0.1 GO:0034063 stress granule assembly(GO:0034063)
0.0 0.1 GO:1901387 positive regulation of voltage-gated calcium channel activity(GO:1901387)
0.0 0.2 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.0 1.8 GO:0002088 lens development in camera-type eye(GO:0002088)
0.0 0.4 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.0 GO:0033512 L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0042584 chromaffin granule membrane(GO:0042584)
0.0 0.2 GO:0033503 HULC complex(GO:0033503)
0.0 1.0 GO:0016605 PML body(GO:0016605)
0.0 0.4 GO:0030315 T-tubule(GO:0030315)
0.0 0.6 GO:1902711 GABA receptor complex(GO:1902710) GABA-A receptor complex(GO:1902711)
0.0 0.3 GO:0009925 basal plasma membrane(GO:0009925)
0.0 0.6 GO:0030964 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.2 GO:0070775 H3 histone acetyltransferase complex(GO:0070775) MOZ/MORF histone acetyltransferase complex(GO:0070776)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0005521 lamin binding(GO:0005521)
0.2 1.3 GO:0016972 thiol oxidase activity(GO:0016972)
0.1 0.8 GO:0004104 cholinesterase activity(GO:0004104)
0.1 0.5 GO:0043734 oxidative DNA demethylase activity(GO:0035516) DNA-N1-methyladenine dioxygenase activity(GO:0043734) RNA N6-methyladenosine dioxygenase activity(GO:1990931)
0.1 0.3 GO:0008457 beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity(GO:0008457) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity(GO:0047256)
0.1 0.4 GO:0070644 vitamin D response element binding(GO:0070644)
0.1 0.3 GO:0038132 neuregulin receptor activity(GO:0038131) neuregulin binding(GO:0038132)
0.1 0.6 GO:0005161 platelet-derived growth factor receptor binding(GO:0005161)
0.0 0.6 GO:0008503 benzodiazepine receptor activity(GO:0008503) GABA-gated chloride ion channel activity(GO:0022851)
0.0 1.0 GO:0017080 sodium channel regulator activity(GO:0017080)
0.0 0.6 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 1.7 GO:0005212 structural constituent of eye lens(GO:0005212)
0.0 0.6 GO:0098632 protein binding involved in cell-cell adhesion(GO:0098632)
0.0 0.1 GO:0050431 transforming growth factor beta binding(GO:0050431)
0.0 0.1 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.3 GO:0004190 aspartic-type endopeptidase activity(GO:0004190) aspartic-type peptidase activity(GO:0070001)
0.0 0.2 GO:0010484 H3 histone acetyltransferase activity(GO:0010484) histone acetyltransferase activity (H3-K23 specific)(GO:0043994)
0.0 0.2 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.9 GO:0046332 SMAD binding(GO:0046332)
0.0 0.0 GO:0016748 succinyltransferase activity(GO:0016748)
0.0 0.4 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.3 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.4 GO:0005242 inward rectifier potassium channel activity(GO:0005242)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.8 PID ATF2 PATHWAY ATF-2 transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 REACTOME DSCAM INTERACTIONS Genes involved in DSCAM interactions
0.1 1.2 REACTOME SYNTHESIS OF PC Genes involved in Synthesis of PC
0.0 0.6 REACTOME GABA A RECEPTOR ACTIVATION Genes involved in GABA A receptor activation