PRJEB1986: zebrafish developmental stages transcriptome

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
klf7b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000043821	Kruppel-like factor 7b
klf7a Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000073857	Kruppel-like factor 7a

Gene	Promoter	Pearson corr. coef.	P-value	Plot
klf7b	dr11_v1_chr9_-_28399071_28399071	-0.25	2.9e-01	Click!
klf7a	dr11_v1_chr1_-_6494384_6494384	-0.25	3.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr19_+_43669122 Show fit	0.31	ENSDART00000139151	si:ch211-193k19.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-193k19.1
chr25_-_36827491 Show fit	0.27	ENSDART00000170941	CU929365.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr1_+_14073891 Show fit	0.25	ENSDART00000021693	ank2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ankyrin 2a, neuronal
chr10_-_41157135 Show fit	0.25	ENSDART00000134851	aak1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	AP2 associated kinase 1b
chr15_-_12229874 Show fit	0.25	ENSDART00000165159	dscaml1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Down syndrome cell adhesion molecule like 1
chr8_+_53423408 Show fit	0.22	ENSDART00000164792	cacna1db Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calcium channel, voltage-dependent, L type, alpha 1D subunit, b
chr7_-_17337233 Show fit	0.21	ENSDART00000050236 ENSDART00000102141	nitr8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	novel immune-type receptor 8
chr8_-_39739627 Show fit	0.21	ENSDART00000135422 ENSDART00000067844	si:ch211-170d8.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-170d8.5
chr22_-_5724085 Show fit	0.21	ENSDART00000110526 ENSDART00000140905	pgbd4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	piggyBac transposable element derived 4
chr21_+_8427059 Show fit	0.19	ENSDART00000143151	dennd1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DENN/MADD domain containing 1A
chr10_-_22970723 Show fit	0.18	ENSDART00000182145 ENSDART00000100802	FP102052.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr23_-_26880623 Show fit	0.14	ENSDART00000038491	adcy6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adenylate cyclase 6b
chr18_-_26894732 Show fit	0.14	ENSDART00000147735 ENSDART00000188938	BX470164.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit si:dkey-24l11.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-24l11.2
chr20_-_49650293 Show fit	0.12	ENSDART00000151239	col12a1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	collagen, type XII, alpha 1b
chr24_-_21487609 Show fit	0.12	ENSDART00000191325	atp8a2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase phospholipid transporting 8A2
chr1_+_26012668 Show fit	0.11	ENSDART00000182428	BX323448.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr25_-_16056292 Show fit	0.11	ENSDART00000186071	cyb5r2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytochrome b5 reductase 2
chr7_+_24081167 Show fit	0.11	ENSDART00000141749	acin1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	apoptotic chromatin condensation inducer 1b
chr20_+_25879826 Show fit	0.11	ENSDART00000018519	zgc:153896 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:153896
chr8_-_49375579 Show fit	0.10	ENSDART00000138767 ENSDART00000097668	si:ch211-194e1.9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-194e1.9
chr1_-_10885269 Show fit	0.10	ENSDART00000126518 ENSDART00000009886	dmd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dystrophin
chr25_+_35683956 Show fit	0.09	ENSDART00000149768	kif21a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinesin family member 21A
chr2_-_42035250 Show fit	0.09	ENSDART00000056460 ENSDART00000140788	gbp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanylate binding protein 1
chr23_-_12014931 Show fit	0.09	ENSDART00000134652	si:dkey-178k16.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-178k16.1
chr6_+_39279104 Show fit	0.09	ENSDART00000023686	ankrd33ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ankyrin repeat domain 33Ab
chr2_+_54844755 Show fit	0.09	ENSDART00000170428	rnf126 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger protein 126
chr22_+_980290 Show fit	0.09	ENSDART00000065377	def6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	differentially expressed in FDCP 6b homolog (mouse)
chr21_-_44003457 Show fit	0.09	ENSDART00000190647	arsib Links NCBI UniProt ZFIN ENSEMBL Google Show fit	arylsulfatase family, member Ib
chr16_-_31686602 Show fit	0.09	ENSDART00000170357	c1s Links NCBI UniProt ZFIN ENSEMBL Google Show fit	complement component 1, s subcomponent
chr7_-_30087048 Show fit	0.08	ENSDART00000112743	nmbb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neuromedin Bb
chr7_-_31759394 Show fit	0.07	ENSDART00000193040	igdcc4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	immunoglobulin superfamily, DCC subclass, member 4
chr25_-_483808 Show fit	0.07	ENSDART00000104720	si:ch1073-385f13.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch1073-385f13.3
chr10_-_37487612 Show fit	0.07	ENSDART00000167964 ENSDART00000171326	si:dkey-65j4.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-65j4.2
chr6_+_30668098 Show fit	0.07	ENSDART00000112294	ttc22 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tetratricopeptide repeat domain 22
chr15_-_36369743 Show fit	0.07	ENSDART00000155942	si:dkey-23k10.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-23k10.3
chr10_+_42462577 Show fit	0.07	ENSDART00000133463	npy8ar Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neuropeptide Y receptor Y8a
chr18_-_6943577 Show fit	0.06	ENSDART00000132399	si:dkey-266m15.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-266m15.6
chr19_+_19511394 Show fit	0.06	ENSDART00000172410	jazf1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	JAZF zinc finger 1a
chr16_-_13921589 Show fit	0.05	ENSDART00000023543	rcvrn2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	recoverin 2
chr8_+_23034718 Show fit	0.04	ENSDART00000184512	ythdf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	YTH N(6)-methyladenosine RNA binding protein 1
chr25_-_19584735 Show fit	0.04	ENSDART00000137930	sycp3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptonemal complex protein 3
chr1_-_44638058 Show fit	0.04	ENSDART00000081835	slc43a1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 43 (amino acid system L transporter), member 1b
chr21_-_20120543 Show fit	0.03	ENSDART00000065664	dusp4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dual specificity phosphatase 4
chr9_-_3958533 Show fit	0.03	ENSDART00000129091	ubr3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin protein ligase E3 component n-recognin 3
chr15_+_17441734 Show fit	0.03	ENSDART00000153729	snx19b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorting nexin 19b
chr8_+_54013199 Show fit	0.02	ENSDART00000158497	CABZ01079663.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr11_-_2594045 Show fit	0.00	ENSDART00000114079	nab2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	NGFI-A binding protein 2 (EGR1 binding protein 2)

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:2000369	regulation of clathrin-mediated endocytosis(GO:2000369)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0035612	AP-2 adaptor complex binding(GO:0035612)
0.0	0.1	GO:0004128	cytochrome-b5 reductase activity, acting on NAD(P)H(GO:0004128)
0.0	0.1	GO:0031705	bombesin receptor binding(GO:0031705)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	REACTOME DSCAM INTERACTIONS	Genes involved in DSCAM interactions