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PRJEB1986: zebrafish developmental stages transcriptome

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Results for hinfp

Z-value: 0.94

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Transcription factors associated with hinfp

Gene Symbol Gene ID Gene Info
hinfp
ENSDARG00000004851 histone H4 transcription factor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
hinfpdr11_v1_chr5_+_30596822_305968220.532.0e-02Click!

Activity profile of hinfp motif

Sorted Z-values of hinfp motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr11_+_6010177 1.71 ENSDART00000170047
ENSDART00000022526
ENSDART00000161001
ENSDART00000188999
gtpbp3
GTP binding protein 3, mitochondrial
chr13_-_3155243 1.55 ENSDART00000139183
ENSDART00000050934
pkdcca
protein kinase domain containing, cytoplasmic a
chr19_-_31765615 1.53 ENSDART00000103636
si:dkeyp-120h9.1
si:dkeyp-120h9.1
chr21_-_1742159 1.40 ENSDART00000151049
onecut2
one cut homeobox 2
chr4_-_77557279 1.40 ENSDART00000180113
AL935186.10

chr5_-_63065912 1.39 ENSDART00000161149
fam57a
family with sequence similarity 57 member A
chr23_+_1216215 1.37 ENSDART00000165957
utrn
utrophin
chr2_-_56635744 1.29 ENSDART00000167790
ENSDART00000168160
pip5k1cb
phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b
chr4_+_27018663 1.28 ENSDART00000180778
CR749777.1

chr14_+_14992909 1.26 ENSDART00000182203
BX119314.1

chr11_+_2710530 1.13 ENSDART00000132768
ENSDART00000030921
ENSDART00000040147
mapk14b
mitogen-activated protein kinase 14b
chr16_-_27564256 1.12 ENSDART00000078297
zgc:153215
zgc:153215
chr7_+_29163762 1.07 ENSDART00000173762
slc38a8b
solute carrier family 38, member 8b
chr5_-_8483457 0.96 ENSDART00000171886
ENSDART00000159477
ENSDART00000157423
lifra
leukemia inhibitory factor receptor alpha a
chr19_+_8612839 0.94 ENSDART00000144925
snx27a
sorting nexin family member 27a
chr17_+_53297822 0.92 ENSDART00000168297
ddx24
DEAD (Asp-Glu-Ala-Asp) box helicase 24
chr7_-_69184420 0.91 ENSDART00000168311
ENSDART00000159239
ENSDART00000161319
usp10
ubiquitin specific peptidase 10
chr5_+_64407896 0.90 ENSDART00000173886
si:ch1073-363c19.3
si:ch1073-363c19.3
chr15_+_23550890 0.88 ENSDART00000009796
ENSDART00000152720
MARK4
si:dkey-31m14.7
chr5_+_47863153 0.87 ENSDART00000051518
rasa1a
RAS p21 protein activator (GTPase activating protein) 1a
chr19_+_5135113 0.86 ENSDART00000151310
si:dkey-89b17.4
si:dkey-89b17.4
chr7_-_8961941 0.84 ENSDART00000111002
si:ch211-74f19.2
si:ch211-74f19.2
chr19_+_48290786 0.82 ENSDART00000165986
zgc:101785
zgc:101785
chr6_-_57655299 0.82 ENSDART00000083807
cbfa2t2
core-binding factor, runt domain, alpha subunit 2; translocated to, 2
chr8_+_29963024 0.81 ENSDART00000149372
ptch1
patched 1
chr9_+_56422517 0.80 ENSDART00000168620
gpr39
G protein-coupled receptor 39
chr19_-_31900893 0.80 ENSDART00000113797
zbtb10
zinc finger and BTB domain containing 10
chr1_-_34612613 0.80 ENSDART00000004361
klf5a
Kruppel-like factor 5a
chr9_+_8407778 0.73 ENSDART00000102754
ENSDART00000178144
zgc:153499
zgc:153499
chr11_+_1551603 0.73 ENSDART00000185383
ENSDART00000121489
ENSDART00000040577
mybl2b
v-myb avian myeloblastosis viral oncogene homolog-like 2b
chr22_+_569565 0.72 ENSDART00000037069
usp49
ubiquitin specific peptidase 49
chr10_+_13279079 0.72 ENSDART00000135082
tmem267
transmembrane protein 267
chr25_-_31907590 0.70 ENSDART00000149707
ENSDART00000149471
eif3ja
eukaryotic translation initiation factor 3, subunit Ja
chr11_+_6009984 0.70 ENSDART00000185680
gtpbp3
GTP binding protein 3, mitochondrial
chr9_-_4856767 0.68 ENSDART00000016814
ENSDART00000138015
fmnl2a
formin-like 2a
chr11_-_25853212 0.67 ENSDART00000145655
tmem51b
transmembrane protein 51b
chr22_-_20342260 0.66 ENSDART00000161610
ENSDART00000165667
tcf3b
transcription factor 3b
chr13_+_52006253 0.62 ENSDART00000181259
CABZ01080135.1

chr10_-_35321625 0.61 ENSDART00000131268
rhbdd2
rhomboid domain containing 2
chr8_+_29962635 0.61 ENSDART00000007640
ptch1
patched 1
chr7_-_29231686 0.60 ENSDART00000173780
herc1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
chr6_+_30091811 0.60 ENSDART00000088403
meltf
melanotransferrin
chr16_-_42969598 0.55 ENSDART00000156011
si:ch211-135n15.3
si:ch211-135n15.3
chr9_+_8408054 0.54 ENSDART00000144373
zgc:153499
zgc:153499
chr5_+_38596630 0.53 ENSDART00000015136
mogat3b
monoacylglycerol O-acyltransferase 3b
chr5_-_18961694 0.53 ENSDART00000142531
ENSDART00000090521
ankle2
ankyrin repeat and LEM domain containing 2
chr14_+_16937997 0.48 ENSDART00000163013
ENSDART00000167856
limch1b
LIM and calponin homology domains 1b
chr4_+_11690923 0.48 ENSDART00000150624
mkln1
muskelin 1, intracellular mediator containing kelch motifs
chr7_-_62244744 0.46 ENSDART00000192522
ENSDART00000170635
ENSDART00000073872
CCKAR
cholecystokinin A receptor
chr7_+_63325819 0.46 ENSDART00000085612
ENSDART00000161436
pcdh7b
protocadherin 7b
chr14_-_40389699 0.45 ENSDART00000181581
ENSDART00000173398
pcdh19
protocadherin 19
chr5_+_47862636 0.45 ENSDART00000139824
rasa1a
RAS p21 protein activator (GTPase activating protein) 1a
chr7_-_48396193 0.44 ENSDART00000083555
sin3ab
SIN3 transcription regulator family member Ab
chr5_+_38886499 0.44 ENSDART00000076845
fras1
Fraser extracellular matrix complex subunit 1
chr21_-_3770636 0.43 ENSDART00000053596
scamp1
secretory carrier membrane protein 1
chr16_+_27564270 0.42 ENSDART00000140460
tmem67
transmembrane protein 67
chr8_-_49935358 0.41 ENSDART00000159782
ENSDART00000156841
agtpbp1
CU694202.1
ATP/GTP binding protein 1

chr14_+_52440161 0.41 ENSDART00000168437
b4galt1l
DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, like
chr6_-_57655030 0.41 ENSDART00000155438
cbfa2t2
core-binding factor, runt domain, alpha subunit 2; translocated to, 2
chr3_+_60962410 0.41 ENSDART00000042674
helz
helicase with zinc finger
chr23_-_1660708 0.40 ENSDART00000175138
CU693481.1

chr7_-_65114067 0.40 ENSDART00000110614
ENSDART00000098277
tmem41b
transmembrane protein 41B
chr8_+_36983559 0.39 ENSDART00000127053
kdm5c
lysine (K)-specific demethylase 5C
chr12_+_18663154 0.39 ENSDART00000057918
si:ch211-147h1.4
si:ch211-147h1.4
chr20_-_2298970 0.38 ENSDART00000136067
EPB41L2
si:ch73-18b11.1
chr23_+_1078072 0.38 ENSDART00000159263
ENSDART00000053527
slc34a2b
solute carrier family 34 (type II sodium/phosphate cotransporter), member 2b
chr9_+_55154414 0.37 ENSDART00000182924
ANOS1
anosmin 1
chr22_+_567733 0.37 ENSDART00000171036
usp49
ubiquitin specific peptidase 49
chr20_+_42246948 0.36 ENSDART00000061135
gopc
golgi-associated PDZ and coiled-coil motif containing
chr25_-_21763750 0.36 ENSDART00000089596
tmem168b
transmembrane protein 168b
chr2_-_3678029 0.35 ENSDART00000146861
mmp16b
matrix metallopeptidase 16b (membrane-inserted)
chr23_-_45319592 0.35 ENSDART00000189861
ccdc171
coiled-coil domain containing 171
chr12_-_34758474 0.35 ENSDART00000153418
bahcc1b
BAH domain and coiled-coil containing 1b
chr5_+_27429872 0.34 ENSDART00000087894
zgc:165555
zgc:165555
chr10_-_21362071 0.30 ENSDART00000125167
avd
avidin
chr16_+_9726038 0.30 ENSDART00000192988
ENSDART00000020859
pip5k1ab
phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b
chr5_-_37881345 0.29 ENSDART00000084819
arhgap35b
Rho GTPase activating protein 35b
chr10_-_43928937 0.29 ENSDART00000168014
ENSDART00000086220
mctp1b
multiple C2 domains, transmembrane 1b
chr23_+_43668756 0.29 ENSDART00000112598
otud4
OTU deubiquitinase 4
chr4_-_20081621 0.29 ENSDART00000024647
dennd6b
DENN/MADD domain containing 6B
chr16_+_9053275 0.28 ENSDART00000123150
dnah5
dynein, axonemal, heavy chain 5
chr10_-_21362320 0.28 ENSDART00000189789
avd
avidin
chr3_-_21185016 0.27 ENSDART00000155550
taok2a
TAO kinase 2a
chr11_+_1764203 0.26 ENSDART00000173023
lrp1aa
low density lipoprotein receptor-related protein 1Aa
chr23_+_642001 0.25 ENSDART00000030643
ENSDART00000124850
irf10
interferon regulatory factor 10
chr21_-_10446405 0.24 ENSDART00000167948
hcn1
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
chr13_+_28618086 0.23 ENSDART00000087001
cnnm2a
cyclin and CBS domain divalent metal cation transport mediator 2a
chr6_-_35310224 0.23 ENSDART00000148997
nos1apa
nitric oxide synthase 1 (neuronal) adaptor protein a
chr1_+_57347888 0.22 ENSDART00000104222
b3gntl1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
chr6_+_7553085 0.22 ENSDART00000150939
ENSDART00000151114
myh10
myosin, heavy chain 10, non-muscle
chr2_+_15048410 0.22 ENSDART00000058484
cnn3b
calponin 3, acidic b
chr9_+_56422311 0.21 ENSDART00000171958
gpr39
G protein-coupled receptor 39
chr21_+_28747236 0.21 ENSDART00000137874
zgc:100829
zgc:100829
chr21_-_12749501 0.21 ENSDART00000179724
LO018011.1

chr2_-_1468258 0.20 ENSDART00000114431
gpaa1
glycosylphosphatidylinositol anchor attachment 1
chr14_-_16423200 0.19 ENSDART00000108868
ENSDART00000161793
maml1
mastermind-like transcriptional coactivator 1
chr10_+_8551897 0.18 ENSDART00000084353
tbc1d10ab
TBC1 domain family, member 10Ab
chr12_+_46608361 0.17 ENSDART00000189164
FADS6
fatty acid desaturase 6
chr23_+_30707837 0.16 ENSDART00000016096
dnajc11a
DnaJ (Hsp40) homolog, subfamily C, member 11a
chr25_-_34156152 0.15 ENSDART00000125036
foxb1a
forkhead box B1a
chr5_-_47975440 0.15 ENSDART00000145665
ENSDART00000007057
ccnh
cyclin H
chr6_-_58975010 0.13 ENSDART00000144911
ENSDART00000144514
mars
methionyl-tRNA synthetase
chr20_-_43917647 0.11 ENSDART00000026213
mark3b
MAP/microtubule affinity-regulating kinase 3b
chr2_-_27651674 0.10 ENSDART00000177402
tgs1
trimethylguanosine synthase 1
chr4_+_71086017 0.10 ENSDART00000159113
si:dkeyp-80d11.10
si:dkeyp-80d11.10
chr5_+_31168096 0.09 ENSDART00000086443
ENSDART00000192271
atp2a3
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
chr20_-_49650293 0.08 ENSDART00000151239
col12a1b
collagen, type XII, alpha 1b
chr6_+_34038963 0.08 ENSDART00000057732
ENSDART00000192496
ap1m3
adaptor-related protein complex 1, mu 3 subunit
chr2_-_5074812 0.07 ENSDART00000163728
dlg1l
discs, large (Drosophila) homolog 1, like
chr6_-_9565526 0.07 ENSDART00000151470
map3k2
mitogen-activated protein kinase kinase kinase 2
chr21_-_41839683 0.07 ENSDART00000160908
ENSDART00000137630
cct6a
chaperonin containing TCP1, subunit 6A (zeta 1)
chr10_-_39130839 0.06 ENSDART00000061274
ENSDART00000148648
rps25
ribosomal protein S25
chr1_+_54069450 0.06 ENSDART00000108601
ENSDART00000187878
dcaf15
DDB1 and CUL4 associated factor 15
chr22_+_11775269 0.06 ENSDART00000140272
krt96
keratin 96
chr21_+_28747069 0.06 ENSDART00000014058
zgc:100829
zgc:100829
chr17_+_6793001 0.05 ENSDART00000030773
foxo3a
forkhead box O3A
chr16_+_25806400 0.04 ENSDART00000154652
irgq1
immunity-related GTPase family, q1
chr24_+_28383278 0.03 ENSDART00000018095
sh3glb1a
SH3-domain GRB2-like endophilin B1a
chr5_-_56943064 0.03 ENSDART00000146991
si:ch211-127d4.3
si:ch211-127d4.3
chr8_-_54223316 0.03 ENSDART00000018054
trh
thyrotropin-releasing hormone
chr24_+_17345521 0.02 ENSDART00000024722
ENSDART00000154250
ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
chr22_+_31059919 0.02 ENSDART00000077063
sec13
SEC13 homolog, nuclear pore and COPII coat complex component
chr19_-_1023051 0.02 ENSDART00000158429
tmem42b
transmembrane protein 42b
chr17_-_24866727 0.01 ENSDART00000027957
hmgcl
3-hydroxymethyl-3-methylglutaryl-CoA lyase
chr22_+_38310957 0.00 ENSDART00000040550
traf5
Tnf receptor-associated factor 5
chr8_+_49936585 0.00 ENSDART00000098707
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit

Network of associatons between targets according to the STRING database.

First level regulatory network of hinfp

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0033210 leptin-mediated signaling pathway(GO:0033210) cellular response to leptin stimulus(GO:0044320) response to leptin(GO:0044321)
0.3 1.5 GO:0033238 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.2 1.1 GO:1901741 positive regulation of myoblast fusion(GO:1901741)
0.2 1.4 GO:0048635 negative regulation of muscle organ development(GO:0048635)
0.1 0.4 GO:2000008 regulation of protein localization to cell surface(GO:2000008) negative regulation of protein localization to cell surface(GO:2000009)
0.1 2.4 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.1 0.4 GO:0035610 protein side chain deglutamylation(GO:0035610)
0.1 0.3 GO:2000660 regulation of interleukin-1-mediated signaling pathway(GO:2000659) negative regulation of interleukin-1-mediated signaling pathway(GO:2000660)
0.1 0.4 GO:0044341 sodium-dependent phosphate transport(GO:0044341)
0.1 0.5 GO:0007084 mitotic nuclear envelope reassembly(GO:0007084)
0.0 1.3 GO:0048013 ephrin receptor signaling pathway(GO:0048013)
0.0 0.5 GO:0048041 cell-substrate adherens junction assembly(GO:0007045) focal adhesion assembly(GO:0048041) regulation of focal adhesion assembly(GO:0051893) regulation of cell-substrate junction assembly(GO:0090109)
0.0 0.9 GO:0030330 DNA damage response, signal transduction by p53 class mediator(GO:0030330)
0.0 0.2 GO:0007221 positive regulation of transcription of Notch receptor target(GO:0007221)
0.0 0.1 GO:0007412 axon target recognition(GO:0007412)
0.0 0.2 GO:0070650 actin filament bundle distribution(GO:0070650)
0.0 0.8 GO:1990126 retrograde transport, endosome to plasma membrane(GO:1990126)
0.0 0.2 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.7 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.0 0.2 GO:0035677 posterior lateral line neuromast hair cell development(GO:0035677)
0.0 0.2 GO:0010960 magnesium ion homeostasis(GO:0010960)
0.0 0.3 GO:0036158 outer dynein arm assembly(GO:0036158)
0.0 1.1 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.6 GO:0006826 iron ion transport(GO:0006826)
0.0 1.4 GO:0055088 lipid homeostasis(GO:0055088)
0.0 0.5 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.0 GO:0042755 eating behavior(GO:0042755)
0.0 0.4 GO:0071711 basement membrane organization(GO:0071711)
0.0 0.4 GO:0044243 collagen catabolic process(GO:0030574) multicellular organism catabolic process(GO:0044243)
0.0 0.8 GO:0030866 cortical actin cytoskeleton organization(GO:0030866)
0.0 0.2 GO:0042407 cristae formation(GO:0042407)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0016460 myosin II complex(GO:0016460)
0.1 0.4 GO:0044233 ER-mitochondrion membrane contact site(GO:0044233)
0.0 0.4 GO:0016580 Sin3 complex(GO:0016580)
0.0 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.7 GO:0016282 eukaryotic 43S preinitiation complex(GO:0016282)
0.0 0.4 GO:0036038 MKS complex(GO:0036038)
0.0 0.3 GO:0036157 outer dynein arm(GO:0036157)
0.0 0.4 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.4 GO:0005903 brush border(GO:0005903)
0.0 0.4 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 0.2 GO:0061617 MICOS complex(GO:0061617)
0.0 0.1 GO:0005675 holo TFIIH complex(GO:0005675)
0.0 0.4 GO:0043186 P granule(GO:0043186)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.4 GO:0097108 hedgehog family protein binding(GO:0097108)
0.2 1.0 GO:0004925 prolactin receptor activity(GO:0004925)
0.1 0.4 GO:0003831 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity(GO:0003831)
0.1 0.5 GO:0032034 myosin head/neck binding(GO:0032028) myosin II head/neck binding(GO:0032034) myosin II heavy chain binding(GO:0032038)
0.1 0.6 GO:0009374 biotin binding(GO:0009374)
0.1 1.5 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.1 0.4 GO:0005436 sodium:phosphate symporter activity(GO:0005436)
0.1 0.5 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 1.6 GO:0016307 phosphatidylinositol phosphate kinase activity(GO:0016307)
0.0 0.4 GO:0034647 histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.2 GO:0050998 nitric-oxide synthase binding(GO:0050998)
0.0 0.5 GO:0051721 protein phosphatase 2A binding(GO:0051721)
0.0 1.1 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.8 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.0 1.6 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.0 0.3 GO:0061578 Lys63-specific deubiquitinase activity(GO:0061578)
0.0 2.0 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459) ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.2 GO:0030552 cAMP binding(GO:0030552)
0.0 0.9 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.2 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 1.7 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 1.1 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.4 PID HEDGEHOG 2PATHWAY Signaling events mediated by the Hedgehog family
0.0 0.9 PID LKB1 PATHWAY LKB1 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.4 REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS Genes involved in Class B/2 (Secretin family receptors)
0.0 0.2 REACTOME NOTCH HLH TRANSCRIPTION PATHWAY Genes involved in Notch-HLH transcription pathway
0.0 0.2 REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE Genes involved in Sema4D induced cell migration and growth-cone collapse