PRJEB1986: zebrafish developmental stages transcriptome

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
irf6 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000101986	interferon regulatory factor 6

Gene	Promoter	Pearson corr. coef.	P-value	Plot
irf6	dr11_v1_chr22_+_1170294_1170295	-0.27	2.6e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr15_-_21702317 Show fit	0.30	ENSDART00000155824	IL4I1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-40g16.6
chr19_-_6303099 Show fit	0.22	ENSDART00000133371	pou2f2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	POU class 2 homeobox 2a
chr6_-_10728057 Show fit	0.19	ENSDART00000002247	sp3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Sp3b transcription factor
chr7_-_8881514 Show fit	0.19	ENSDART00000081620	vax2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ventral anterior homeobox 2
chr12_+_16452575 Show fit	0.16	ENSDART00000058665	kif20bb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinesin family member 20Bb
chr12_+_16452912 Show fit	0.15	ENSDART00000192467	kif20bb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinesin family member 20Bb
chr7_+_56472585 Show fit	0.14	ENSDART00000135259 ENSDART00000073596	ist1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	increased sodium tolerance 1 homolog (yeast)
chr16_-_46766153 Show fit	0.14	ENSDART00000115244	MEX3A Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mex-3 RNA binding family member A
chr18_+_44532370 Show fit	0.13	ENSDART00000086952	st14a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	suppression of tumorigenicity 14 (colon carcinoma) a
chr16_+_19637384 Show fit	0.11	ENSDART00000184773 ENSDART00000191895 ENSDART00000182020 ENSDART00000135359	macc1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	metastasis associated in colon cancer 1
chr3_-_4501026 Show fit	0.10	ENSDART00000163052	zgc:162198 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:162198
chr18_+_17624295 Show fit	0.10	ENSDART00000151865 ENSDART00000190408 ENSDART00000189204 ENSDART00000188894 ENSDART00000033762 ENSDART00000193471	nlrc5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	NLR family, CARD domain containing 5
chr18_+_44532883 Show fit	0.10	ENSDART00000121994	st14a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	suppression of tumorigenicity 14 (colon carcinoma) a
chr17_-_30666037 Show fit	0.09	ENSDART00000156509	alkal2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ALK and LTK ligand 2b
chr7_+_69187585 Show fit	0.07	ENSDART00000160499 ENSDART00000166258	marveld3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MARVEL domain containing 3
chr9_-_23765480 Show fit	0.07	ENSDART00000027212	si:ch211-219a4.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-219a4.6
chr17_-_22552678 Show fit	0.06	ENSDART00000079401	si:ch211-125o16.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-125o16.4
chr10_+_28160265 Show fit	0.06	ENSDART00000022484	rnft1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger protein, transmembrane 1
chr14_+_33329761 Show fit	0.05	ENSDART00000161138	sowahd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sosondowah ankyrin repeat domain family d
chr19_-_15420678 Show fit	0.05	ENSDART00000151454 ENSDART00000027697	serinc2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	serine incorporator 2
chr20_-_3911546 Show fit	0.05	ENSDART00000169787	cnksr3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cnksr family member 3
chr11_-_30508843 Show fit	0.03	ENSDART00000101667 ENSDART00000179930	map4k3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitogen-activated protein kinase kinase kinase kinase 3a
chr2_-_37140423 Show fit	0.03	ENSDART00000144220	tspan37 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tetraspanin 37
chr12_-_16452200 Show fit	0.02	ENSDART00000037601	rpp30 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribonuclease P/MRP 30 subunit
chr8_+_47897734 Show fit	0.01	ENSDART00000140266	mfn2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitofusin 2
chr21_+_21010786 Show fit	0.01	ENSDART00000079692	ndr1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nodal-related 1
chr16_+_27383717 Show fit	0.01	ENSDART00000132329 ENSDART00000136256	stx17 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	syntaxin 17
chr18_+_44532199 Show fit	0.01	ENSDART00000135386	st14a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	suppression of tumorigenicity 14 (colon carcinoma) a

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0090259	regulation of retinal ganglion cell axon guidance(GO:0090259)
0.0	0.1	GO:0010633	negative regulation of epithelial cell migration(GO:0010633)
0.0	0.1	GO:0060339	negative regulation of type I interferon-mediated signaling pathway(GO:0060339)
0.0	0.1	GO:0070376	ERK5 cascade(GO:0070375) regulation of ERK5 cascade(GO:0070376) positive regulation of ERK5 cascade(GO:0070378)
0.0	0.1	GO:1904292	regulation of ERAD pathway(GO:1904292)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0043034	costamere(GO:0043034)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0030298	receptor signaling protein tyrosine kinase activator activity(GO:0030298)