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GSE67402: E.coli regulatory changes under long-term starvation
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Motif significance table
Sample table
Mean activities
All promoters sorted by FOV
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Activity table
Activity delta table
Regulatory interactions
Motifs sorted by significance
Expression table
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Mean activities
Top 10 and bottom 10 mean activities.
−10
−5
0
5
10
UhpA
SlyA
XapR
GatR
TreR
MarR
DicA
EbgR
YpdB
CynR
EnvR
GadW
PdhR
EnvY
Fis
RstA
RelB
UvrY
GlrR
HdfR
plotly-logomark
Mean activities sorted by motif Z-value.
−2
0
2
4
6
8
RcsB-BglJ
Sigma28
UhpA
EvgA
NanR
PhoB
Sigma38
SlyA
CynR
TorR
RelB
ArcA
RstA
PdhR
Sigma70
GlrR
HdfR
UvrY
Lrp
Fis
plotly-logomark
Sorted mean activities for every motif.
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entries
Motif name
Mean activity
Z-Value
Associated genes
Logo
HdfR
7.495
2.025
hdfR
Links
RegulonDB
EcoCyc
GlrR
5.579
1.659
glrR
Links
RegulonDB
EcoCyc
UvrY
4.324
2.163
uvrY
Links
RegulonDB
EcoCyc
RelB
3.263
0.993
relB
Links
RegulonDB
EcoCyc
RstA
2.888
1.501
rstA
Links
RegulonDB
EcoCyc
Fis
2.881
8.386
fis
Links
RegulonDB
EcoCyc
EnvY
2.418
0.788
envY
Links
RegulonDB
EcoCyc
PdhR
2.095
1.534
pdhR
Links
RegulonDB
EcoCyc
GadW
1.650
0.858
gadW
Links
RegulonDB
EcoCyc
EnvR
1.528
0.317
envR
Links
RegulonDB
EcoCyc
Showing 1 to 10 of 205 entries
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