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GSE67402: E.coli regulatory changes under long-term starvation
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Results for CecR
Z-value: 0.32
Transcription factors associated with CecR
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
cecR
|
cecR | CecR DNA-binding transcriptional dual regulator |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| cecR | 0.54 | 3.9e-03 | Click! |
Activity profile of CecR motif
Sorted Z-values of CecR motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| cecR-ybhGFSR | 5.47 |
ybhF
ybhG
cecR
ybhS
ybhR
|
multidrug ABC exporter ATP binding subunit predicted membrane fusion protein CecR DNA-binding transcriptional dual regulator multidrug ABC exporter membrane subunit multidrug ABC exporter membrane subunit |
Network of associatons between targets according to the STRING database.
First level regulatory network of CecR
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.4 | 5.5 | GO:2000143 | negative regulation of DNA-templated transcription, initiation(GO:2000143) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 5.5 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.9 | 5.5 | GO:0015562 | efflux transmembrane transporter activity(GO:0015562) |