Project

GSE67402: E.coli regulatory changes under long-term starvation

Navigation
Downloads

Results for MhpR

Z-value: 0.36

Transcription factors associated with MhpR

Gene Symbol Gene ID Gene Info
mhpR
mhpR MhpR transcriptional activator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
lacI-0.534.5e-03Click!
mhpR-0.534.5e-03Click!

Activity profile of MhpR motif

Sorted Z-values of MhpR motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
mhpABCDFE 6.20
mhpC
mhpB
mhpA
mhpF
mhpE
mhpD
2-hydroxy-6-ketonona-2,4-dienedioate hydrolase
2,3-dihydroxyphenylpropionate 1,2-dioxygenase
3-(3-hydroxyphenyl)propionate 2-hydroxylase
acetaldehyde dehydrogenase (acylating)
4-hydroxy-2-ketovalerate aldolase
2-hydroxypentadienoate hydratase

Network of associatons between targets according to the STRING database.

First level regulatory network of MhpR

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 6.2 GO:0019748 secondary metabolic process(GO:0019748)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 6.2 GO:0005737 cytoplasm(GO:0005737)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.1 6.2 GO:0004497 monooxygenase activity(GO:0004497)