GSE67402: E.coli regulatory changes under long-term starvation
Gene Symbol | Gene ID | Gene Info |
---|---|---|
sgrR
|
sgrR | SgrR DNA-binding transcriptional dual regulator |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
sgrR | 0.11 | 5.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
sgrST-setA | 5.74 |
sgrT
setA
sgrS
|
SgrT, regulator of PtsG activity sugar / lactose exporter SetA SgrS |
|
alaC | 1.54 |
alaC
|
glutamate-pyruvate aminotransferase |
|
sgrR-sroA-tbpA-thiPQ | 1.09 |
thiP
tbpA
thiQ
sgrR
sroA
|
thiamin ABC transporter - membrane subunit thiamin ABC transporter - periplasmic binding protein thiamin ABC transporter - ATP binding subunit SgrR DNA-binding transcriptional dual regulator SroA |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 5.7 | GO:0015758 | glucose transport(GO:0015758) glucose import(GO:0046323) |
0.5 | 1.5 | GO:0009079 | alanine biosynthetic process(GO:0006523) pyruvate family amino acid biosynthetic process(GO:0009079) D-alanine biosynthetic process(GO:0030632) L-alanine biosynthetic process(GO:0042852) D-alanine family amino acid biosynthetic process(GO:0046145) D-amino acid biosynthetic process(GO:0046437) |
0.2 | 1.1 | GO:0045117 | azole transport(GO:0045117) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | GO:1904949 | ATP-binding cassette (ABC) transporter complex(GO:0043190) ATPase dependent transmembrane transport complex(GO:0098533) ATPase complex(GO:1904949) |
0.0 | 5.7 | GO:0016021 | integral component of membrane(GO:0016021) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 5.7 | GO:0005351 | sugar:proton symporter activity(GO:0005351) |
0.2 | 1.1 | GO:1901474 | azole transporter activity(GO:0045118) azole transmembrane transporter activity(GO:1901474) |
0.1 | 1.5 | GO:0008483 | transaminase activity(GO:0008483) |