GSE67402: E.coli regulatory changes under long-term starvation

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
hdfR Links RegulonDB EcoCyc	hdfR	HdfR DNA-binding transcriptional dual regulator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
hdfR		0.82	1.9e-07	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
gltBDF Show fit	29.80		gltB Links RegulonDB EcoCyc Show fit gltD Links RegulonDB EcoCyc Show fit gltF Links RegulonDB EcoCyc Show fit	glutamate synthase, large subunit glutamate synthase, small subunit periplasmic protein
flhDC Show fit	28.71		flhC Links RegulonDB EcoCyc Show fit flhD Links RegulonDB EcoCyc Show fit	FlhC transcriptional dual regulator FlhD transcriptional dual regulator

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
9.9	29.8	GO:0019676	ammonia assimilation cycle(GO:0019676)
0.1	28.7	GO:0097659	transcription, DNA-templated(GO:0006351) nucleic acid-templated transcription(GO:0097659)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	29.8	GO:0030288	outer membrane-bounded periplasmic space(GO:0030288)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
5.0	29.8	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors(GO:0016638)