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GSE67402: E.coli regulatory changes under long-term starvation

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Results for FeaR

Z-value: 0.73

Transcription factors associated with FeaR

Gene Symbol Gene ID Gene Info
feaR
feaR FeaR DNA-binding transcriptional activator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
feaR-0.861.3e-08Click!

Activity profile of FeaR motif

Sorted Z-values of FeaR motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
tynA 14.19
tynA
copper-containing amine oxidase
feaB 11.82
feaB
phenylacetaldehyde dehydrogenase

Network of associatons between targets according to the STRING database.

First level regulatory network of FeaR

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.0 11.8 GO:0042178 phenol-containing compound metabolic process(GO:0018958) xenobiotic catabolic process(GO:0042178)
1.8 14.2 GO:0009310 amine catabolic process(GO:0009310) cellular biogenic amine catabolic process(GO:0042402)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 14.2 GO:0042597 periplasmic space(GO:0042597)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.8 14.2 GO:0048038 quinone binding(GO:0048038)
2.0 11.8 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)