Project
GSE67402: E.coli regulatory changes under long-term starvation
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Results for GatR
Z-value: 0.56
Transcription factors associated with GatR
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
gatR
|
gatR | DNA-binding transcriptional repressor GatR N-terminal fragment |
Activity profile of GatR motif
Sorted Z-values of GatR motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| gatYZABCD | 15.69 |
gatY
gatZ
gatD
gatA
gatB
gatC
|
tagatose-1,6-bisphosphate aldolase 2 subunit GatY tagatose-1,6-bisphosphate aldolase 2 subunit GatZ L-galactitol-1-phosphate 5-dehydrogenase galactitol PTS permease - GatA subunit galactitol PTS permease - GatB subunit galactitol PTS permease - GatC subunit |
Network of associatons between targets according to the STRING database.
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 5.2 | 15.7 | GO:0006059 | hexitol metabolic process(GO:0006059) hexitol catabolic process(GO:0019407) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 15.7 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.0 | 15.7 | GO:0090563 | protein-phosphocysteine-sugar phosphotransferase activity(GO:0090563) |