ISMARA results: BolA

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GSE67402: E.coli regulatory changes under long-term starvation

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Results for BolA

Z-value: 0.57

Transcription factors associated with BolA

Gene Symbol	Gene ID	Gene Info
bolA RegulonDB EcoCyc	bolA	BolA DNA-binding transcriptional dual regulator

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
bolA		0.28	1.6e-01	Click!

Activity profile of BolA motif

Sorted Z-values of BolA motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
ampC Show fit	10.63		ampC RegulonDB EcoCyc Show fit	β-lactamase; penicillin resistance
dacC Show fit	5.06		dacC RegulonDB EcoCyc Show fit	penicillin-binding protein 6

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Network of associatons between targets according to the STRING database.

First level regulatory network of BolA

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
1.0	5.1	GO:0022604	cell morphogenesis(GO:0000902) regulation of cell shape(GO:0008360) anatomical structure morphogenesis(GO:0009653) regulation of anatomical structure morphogenesis(GO:0022603) regulation of cell morphogenesis(GO:0022604) cellular component morphogenesis(GO:0032989) single-organism developmental process(GO:0044767) anatomical structure development(GO:0048856) cellular developmental process(GO:0048869) regulation of developmental process(GO:0050793)

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Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	5.1	GO:0005887	integral component of plasma membrane(GO:0005887)

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Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
2.7	10.6	GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
1.7	5.1	GO:0008658	penicillin binding(GO:0008658)

Showing 1 to 2 of 2 entries

Results for BolA

Z-value: 0.57

Transcription factors associated with BolA

Activity-expression correlation:

Activity profile of BolA motif

Sorted Z-values of BolA motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of BolA

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: