GSE67402: E.coli regulatory changes under long-term starvation
Gene Symbol | Gene ID | Gene Info |
---|---|---|
rcsB
|
rcsB | DNA-binding transcriptional activator RcsB |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
rcsB | 0.22 | 2.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
osmB | 18.58 |
osmB
|
OsmB osmotically inducible lipoprotein |
|
hdeD | 8.79 |
hdeD
|
acid-resistance membrane protein |
|
rprA | 7.55 |
rprA
|
RprA |
|
bdm-sra | 5.32 |
bdm
sra
|
biofilm-dependent modulation protein 30S ribosomal subunit protein S22 |
|
gadBC | 4.63 |
gadB
gadC
|
glutamate decarboxylase B subunit glutamic acid:4-aminobutyrate antiporter |
|
safA-ydeO | 4.13 |
ydeO
safA
|
YdeO DNA-binding transcriptional dual regulator two-component system connector protein |
|
hdeAB-yhiD | 1.88 |
yhiD
hdeB
hdeA
|
inner membrane protein YhiD HdeB monomer HdeA monomer, chaperone active form |
|
osmC | 1.33 |
osmC
|
osmotically inducible peroxiredoxin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 5.3 | GO:0031346 | positive regulation of cell projection organization(GO:0031346) |
0.6 | 10.1 | GO:0009268 | response to pH(GO:0009268) |
0.1 | 1.3 | GO:0006972 | hyperosmotic response(GO:0006972) |
0.0 | 3.6 | GO:0065007 | biological regulation(GO:0065007) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.3 | GO:0022627 | small ribosomal subunit(GO:0015935) cytosolic small ribosomal subunit(GO:0022627) |
0.0 | 8.8 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 1.9 | GO:0051087 | chaperone binding(GO:0051087) |
0.4 | 1.3 | GO:0051920 | peroxiredoxin activity(GO:0051920) |
0.3 | 4.6 | GO:0015297 | antiporter activity(GO:0015297) |