GSE67402: E.coli regulatory changes under long-term starvation

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
rcdA Links RegulonDB EcoCyc	rcdA	RcdA DNA-binding transcriptional regulator

Promoter	Log-likelihood	Transcript	Gene	Gene Info
ydeI Show fit	11.97		ydeI Links RegulonDB EcoCyc Show fit	stress response protein
asr Show fit	11.50		asr Links RegulonDB EcoCyc Show fit	acid shock protein
sulA Show fit	2.75		sulA Links RegulonDB EcoCyc Show fit	SOS cell division inhibitor
csgDEFG Show fit	0.16		csgG Links RegulonDB EcoCyc Show fit csgF Links RegulonDB EcoCyc Show fit csgE Links RegulonDB EcoCyc Show fit csgD Links RegulonDB EcoCyc Show fit	curli secretion channel curli assembly component curli transport specificity factor CsgD DNA-binding transcriptional dual regulator

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.4	12.0	GO:0070301	cellular response to hydrogen peroxide(GO:0070301)
1.9	11.5	GO:0010043	response to zinc ion(GO:0010043)
0.9	2.7	GO:0043087	regulation of GTPase activity(GO:0043087)
0.0	0.2	GO:0043900	regulation of multi-organism process(GO:0043900) regulation of single-species biofilm formation(GO:1900190)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	11.7	GO:0042597	periplasmic space(GO:0042597)