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GSE67402: E.coli regulatory changes under long-term starvation

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Results for AdiY

Z-value: 0.49

Transcription factors associated with AdiY

Gene Symbol Gene ID Gene Info
adiY AdiY DNA-binding transcriptional activator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
adiY-0.212.9e-01Click!

Activity profile of AdiY motif

Sorted Z-values of AdiY motif

Promoter Log-likelihood Transcript Gene Gene Info
gltBDF 9.34 glutamate synthase, large subunit
glutamate synthase, small subunit
periplasmic protein
gadAX 5.29 GadX DNA-binding transcriptional dual regulator
glutamate decarboxylase A subunit

Network of associatons between targets according to the STRING database.

First level regulatory network of AdiY

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.1 9.3 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.4 1.5 GO:0045852 pH elevation(GO:0045852) intracellular pH elevation(GO:0051454)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 9.3 GO:0030288 outer membrane-bounded periplasmic space(GO:0030288)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 9.3 GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors(GO:0016638)
0.7 5.3 GO:0001140 transcriptional activator activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding(GO:0001140)