GSE67402: E.coli regulatory changes under long-term starvation

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
malT Links RegulonDB EcoCyc	malT	MalT transcriptional activator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
malT		0.71	2.8e-05	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
malPQ Show fit	88.39		malP Links RegulonDB EcoCyc Show fit malQ Links RegulonDB EcoCyc Show fit	maltodextrin phosphorylase amylomaltase/amylomaltase/amylomaltase
malEFG Show fit	75.90		malF Links RegulonDB EcoCyc Show fit malG Links RegulonDB EcoCyc Show fit malE Links RegulonDB EcoCyc Show fit	maltose ABC transporter - membrane subunit maltose ABC transporter - membrane subunit maltose ABC transporter - periplasmic binding protein
malK-lamB-malM Show fit	52.27		lamB Links RegulonDB EcoCyc Show fit malM Links RegulonDB EcoCyc Show fit malK Links RegulonDB EcoCyc Show fit	maltose outer membrane porin / phage lambda receptor protein maltose regulon periplasmic protein maltose ABC transporter - ATP binding subunit
malZ Show fit	22.68		malZ Links RegulonDB EcoCyc Show fit	maltodextrin glucosidase
malS Show fit	6.34		malS Links RegulonDB EcoCyc Show fit	α-amylase

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
42.7	128.2	GO:0015768	maltose transport(GO:0015768)
39.1	117.4	GO:0030978	alpha-glucan metabolic process(GO:0030978) alpha-glucan catabolic process(GO:0030980)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
10.5	52.3	GO:0046930	pore complex(GO:0046930)
6.3	75.9	GO:0055052	ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing(GO:0055052)
0.2	111.1	GO:0005737	cytoplasm(GO:0005737)
0.1	6.3	GO:0030288	outer membrane-bounded periplasmic space(GO:0030288)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
42.7	128.2	GO:0005363	maltose transmembrane transporter activity(GO:0005363)
29.5	88.4	GO:0004133	glycogen debranching enzyme activity(GO:0004133)
4.5	22.7	GO:0015926	glucosidase activity(GO:0015926)
0.8	6.3	GO:0005509	calcium ion binding(GO:0005509)