GSE67402: E.coli regulatory changes under long-term starvation

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
dinJ Links RegulonDB EcoCyc	dinJ	DinJ antitoxin of YafQ-DinJ toxin-antitoxin system and DNA-binding transcriptional repressor

Gene	Promoter	Pearson corr. coef.	P-value	Plot
dinJ		0.42	3.1e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
cspE Show fit	22.56		cspE Links RegulonDB EcoCyc Show fit	transcription antiterminator and regulator of RNA stability
dinJ-yafQ Show fit	19.02		dinJ Links RegulonDB EcoCyc Show fit yafQ Links RegulonDB EcoCyc Show fit	DinJ antitoxin of YafQ-DinJ toxin-antitoxin system and DNA-binding transcriptional repressor toxin of the YafQ-DinJ toxin-antitoxin system

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
7.5	22.6	GO:0043242	negative regulation of protein complex disassembly(GO:0043242) negative regulation of DNA-templated transcription, termination(GO:0060567)
4.8	19.0	GO:0043624	translational termination(GO:0006415) cellular protein complex disassembly(GO:0043624) negative regulation of DNA-templated transcription, initiation(GO:2000143)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	22.6	GO:0005829	cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
5.6	22.6	GO:0001070	RNA binding transcription factor activity(GO:0001070) transcription antitermination factor activity, RNA binding(GO:0001072)
3.2	19.0	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters(GO:0016894)