GSE67402: E.coli regulatory changes under long-term starvation

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
cbl Links RegulonDB EcoCyc	cbl	Cbl DNA-binding transcriptional activator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
cbl		-0.08	7.0e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
ssuEADCB Show fit	1.29		ssuE Links RegulonDB EcoCyc Show fit ssuD Links RegulonDB EcoCyc Show fit ssuA Links RegulonDB EcoCyc Show fit ssuC Links RegulonDB EcoCyc Show fit ssuB Links RegulonDB EcoCyc Show fit	NADPH-dependent FMN reductase alkanesulfonate monooxygenase, FMNH2-dependent aliphatic sulfonate ABC transporter - periplasmic binding protein aliphatic sulfonate ABC transporter - membrane subunit aliphatic sulfonate ABC transporter - ATP binding subunit
tauABCD Show fit	1.09		tauB Links RegulonDB EcoCyc Show fit tauC Links RegulonDB EcoCyc Show fit tauA Links RegulonDB EcoCyc Show fit tauD Links RegulonDB EcoCyc Show fit	taurine ABC transporter - ATP binding subunit taurine ABC transporter - membrane subunit taurine ABC transporter - periplasmic binding protein taurine dioxygenase

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.8	2.4	GO:0009970	cellular response to sulfate starvation(GO:0009970) xenobiotic transport(GO:0042908)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.3	GO:0055052	ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing(GO:0055052)
0.0	1.1	GO:0043190	ATP-binding cassette (ABC) transporter complex(GO:0043190) ATPase dependent transmembrane transport complex(GO:0098533) ATPase complex(GO:1904949)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	1.3	GO:0004497	monooxygenase activity(GO:0004497)
0.4	1.1	GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)