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GSE67402: E.coli regulatory changes under long-term starvation
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Sample name: 008_hr_rep3
Sorted Z-values for 008_hr_rep3
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| Sigma38 | 3.924 |
|
|
| H-NS | 2.686 |
|
|
| Fis | 2.507 |
|
|
| IHF | 2.498 |
|
|
| PhoB | 2.287 |
|
|
| CRP | 2.010 |
|
|
| SoxR | 1.984 |
|
|
| GlcC | 1.951 |
|
|
| DcuR | 1.881 |
|
|
| Sigma54 | 1.768 |
|
|
| MntR | 1.642 |
|
|
| AraC | 1.335 |
|
|
| YdeO | 1.308 |
|
|
| FlhDC | 1.301 |
|
|
| RcsB-BglJ | 1.162 |
|
|
| Sigma32 | 1.092 |
|
|
| TorR | 1.009 |
|
|
| TrpR | 0.994 |
|
|
| MqsA | 0.966 |
|
|
| OmpR | 0.958 |
|
|
| UvrY | 0.951 |
|
|
| LeuO | 0.901 |
|
|
| EvgA | 0.883 |
|
|
| CdaR | 0.881 |
|
|
| CreB | 0.850 |
|
|
| CsgD | 0.840 |
|
|
| DsdC | 0.806 |
|
|
| McbR | 0.798 |
|
|
| CynR | 0.786 |
|
|
| BolA | 0.785 |
|
|
| NagC | 0.775 |
|
|
| ArcA | 0.766 |
|
|
| FeaR | 0.756 |
|
|
| YjjQ | 0.746 |
|
|
| FucR | 0.740 |
|
|
| RclR | 0.740 |
|
|
| PaaX | 0.731 |
|
|
| RhaS | 0.676 |
|
|
| DinJ-YafQ | 0.657 |
|
|
| OxyR | 0.649 |
|
|
| DicA | 0.646 |
|
|
| GadE-RcsB | 0.625 |
|
|
| IclR | 0.622 |
|
|
| NimR | 0.569 |
|
|
| Dan | 0.568 |
|
|
| RcsAB | 0.552 |
|
|
| AllR | 0.544 |
|
|
| XapR | 0.544 |
|
|
| RcsB | 0.543 |
|
|
| PhoP | 0.537 |
|
|
| IdnR | 0.503 |
|
|
| Ada | 0.493 |
|
|
| DpiA | 0.478 |
|
|
| NarP | 0.475 |
|
|
| CadC | 0.464 |
|
|
| AidB | 0.453 |
|
|
| IscR | 0.452 |
|
|
| MurR | 0.441 |
|
|
| MngR | 0.438 |
|
|
| MatA | 0.405 |
|
|
| GatR | 0.398 |
|
|
| YpdB | 0.376 |
|
|
| CsiR | 0.375 |
|
|
| KdpE | 0.374 |
|
|
| SgrR | 0.366 |
|
|
| RhaR | 0.360 |
|
|
| PgrR | 0.358 |
|
|
| EbgR | 0.356 |
|
|
| GlpR | 0.340 |
|
|
| LysR | 0.330 |
|
|
| LsrR | 0.329 |
|
|
| GadX | 0.321 |
|
|
| Nac | 0.307 |
|
|
| PrpR | 0.295 |
|
|
| LacI | 0.267 |
|
|
| MtlR | 0.266 |
|
|
| MelR | 0.253 |
|
|
| ZraR | 0.236 |
|
|
| SlyA | 0.226 |
|
|
| UhpA | 0.225 |
|
|
| BetI | 0.222 |
|
|
| TreR | 0.209 |
|
|
| NorR | 0.206 |
|
|
| YeiL | 0.193 |
|
|
| UxuR | 0.190 |
|
|
| MhpR | 0.180 |
|
|
| FhlA | 0.158 |
|
|
| YqhC | 0.148 |
|
|
| ExuR | 0.134 |
|
|
| Rob | 0.129 |
|
|
| GutM | 0.126 |
|
|
| AtoC | 0.124 |
|
|
| AlsR | 0.120 |
|
|
| NikR | 0.113 |
|
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| PutA | 0.107 |
|
|
| GalS | 0.099 |
|
|
| GalR | 0.099 |
|
|
| SdiA | 0.093 |
|
|
| HcaR | 0.093 |
|
|
| Sigma28 | 0.064 |
|
|
| GntR | 0.061 |
|
|
| RutR | 0.060 |
|
|
| SutR | 0.038 |
|
|
| AllS | 0.037 |
|
|
| AgaR | 0.031 |
|
|
| FadR | 0.030 |
|
|
| Lrp | 0.029 |
|
|
| ArsR | 0.022 |
|
|
| UlaR | 0.019 |
|
|
| AcrR | 0.005 |
|
|
| RelB | -0.001 |
|
|
| ChbR | -0.003 |
|
|
| XylR | -0.008 |
|
|
| UidR | -0.020 |
|
|
| CecR | -0.028 |
|
|
| LldR | -0.028 |
|
|
| MetJ | -0.036 |
|
|
| YiaJ | -0.036 |
|
|
| NemR | -0.050 |
|
|
| DnaA | -0.070 |
|
|
| CaiF | -0.072 |
|
|
| Cbl | -0.098 |
|
|
| GadW | -0.105 |
|
|
| RtcR | -0.114 |
|
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| HipB | -0.118 |
|
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| BaeR | -0.120 |
|
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| YehT | -0.144 |
|
|
| MalI | -0.150 |
|
|
| EnvY | -0.155 |
|
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| SoxS | -0.156 |
|
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| BluR | -0.159 |
|
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| DhaR | -0.180 |
|
|
| LexA | -0.200 |
|
|
| BasR | -0.204 |
|
|
| ZntR | -0.208 |
|
|
| YqjI | -0.213 |
|
|
| QseB | -0.223 |
|
|
| HyfR | -0.230 |
|
|
| TdcA | -0.230 |
|
|
| FliZ | -0.237 |
|
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| NanR | -0.241 |
|
|
| CpxR | -0.269 |
|
|
| AppY | -0.291 |
|
|
| BirA | -0.301 |
|
|
| RbsR | -0.312 |
|
|
| EnvR | -0.315 |
|
|
| DeoR | -0.328 |
|
|
| NhaR | -0.340 |
|
|
| NadR | -0.353 |
|
|
| HipAB | -0.354 |
|
|
| Zur | -0.359 |
|
|
| MarR | -0.369 |
|
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| AscG | -0.408 |
|
|
| KdgR | -0.414 |
|
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| CusR | -0.420 |
|
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| YedW | -0.420 |
|
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| AccB | -0.452 |
|
|
| MraZ | -0.464 |
|
|
| FabR | -0.485 |
|
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| HU | -0.498 |
|
|
| MazE-MazF | -0.498 |
|
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| MazE | -0.498 |
|
|
| NrdR | -0.523 |
|
|
| PepA | -0.526 |
|
|
| ModE | -0.531 |
|
|
| ComR | -0.536 |
|
|
| GcvA | -0.547 |
|
|
| PspF | -0.587 |
|
|
| FNR | -0.600 |
|
|
| LrhA | -0.623 |
|
|
| MetR | -0.628 |
|
|
| NarL | -0.645 |
|
|
| AdiY | -0.661 |
|
|
| AlaS | -0.695 |
|
|
| RcdA | -0.752 |
|
|
| IlvY | -0.760 |
|
|
| MarA | -0.783 |
|
|
| MlrA | -0.839 |
|
|
| Sigma19 | -0.917 |
|
|
| ArgR | -0.930 |
|
|
| CspA | -0.952 |
|
|
| GadE | -0.957 |
|
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| MprA | -0.958 |
|
|
| NsrR | -1.053 |
|
|
| CueR | -1.101 |
|
|
| GlrR | -1.128 |
|
|
| HdfR | -1.194 |
|
|
| RstA | -1.201 |
|
|
| PdhR | -1.225 |
|
|
| MalT | -1.240 |
|
|
| TyrR | -1.242 |
|
|
| CytR | -1.343 |
|
|
| HypT | -1.495 |
|
|
| PuuR | -1.540 |
|
|
| ArgP | -1.577 |
|
|
| AsnC | -1.616 |
|
|
| Cra | -1.646 |
|
|
| StpA | -1.671 |
|
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| NtrC | -1.731 |
|
|
| Mlc | -1.799 |
|
|
| Sigma70 | -2.943 |
|
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| CysB | -3.081 |
|
|
| Sigma24 | -3.246 |
|
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| PurR | -3.348 |
|
|
| Fur | -4.005 |
|
|