Project

PRJNA438478: RNAseq of wild type zebrafish germline

Navigation
Downloads

ISMARA results PRJNA438478: RNAseq of wild type zebrafish germline

ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.

All motifs sorted by activity significance

Motif name Z-value Associated genes Profile Logo
rfx3_rfx2+rfx4 15.64 small profile SeqLogo of rfx3_rfx2+rfx4
rfx7a+rfx7b 5.12 small profile SeqLogo of rfx7a+rfx7b
etv5a+etv5b_elk1_elk4_etv1_elf1_erf+erfl3_gabpa_elk3 4.19 small profile SeqLogo of etv5a+etv5b_elk1_elk4_etv1_elf1_erf+erfl3_gabpa_elk3
elf2a+elf2b 3.53 small profile SeqLogo of elf2a+elf2b
spi1a+spi1b 3.26 small profile SeqLogo of spi1a+spi1b
snai1a 2.91 small profile SeqLogo of snai1a
bhlhe41_tfeb_usf2_tfec_max_mnta+mntb_mitfa+mitfb_mlxipl_usf1_usf1l_mxi1_srebf1 2.83 small profile SeqLogo of bhlhe41_tfeb_usf2_tfec_max_mnta+mntb_mitfa+mitfb_mlxipl_usf1_usf1l_mxi1_srebf1
BX548005.1+smarcc2 2.72 small profile SeqLogo of BX548005.1+smarcc2
clocka+clockb+npas2 2.72 small profile SeqLogo of clocka+clockb+npas2
esrrd+esrrga_esrrb_esrra+esrrgb 2.49 small profile SeqLogo of esrrd+esrrga_esrrb_esrra+esrrgb
fosaa+fosab+fosl1a 2.48 small profile SeqLogo of fosaa+fosab+fosl1a
foxd3 2.45 small profile SeqLogo of foxd3
sox19a+sox2 2.32 small profile SeqLogo of sox19a+sox2
arntl1a+arntl1b 2.24 small profile SeqLogo of arntl1a+arntl1b
sp1 2.23 small profile SeqLogo of sp1
rfx1a+rfx1b 2.17 small profile SeqLogo of rfx1a+rfx1b
tbr1b_tbx16+tbx16l+tbx2a+tbx2b 2.11 small profile SeqLogo of tbr1b_tbx16+tbx16l+tbx2a+tbx2b
creb1a+creb1b+crema+cremb 2.06 small profile SeqLogo of creb1a+creb1b+crema+cremb
foxo4 2.03 small profile SeqLogo of foxo4
pax2b 2.00 small profile SeqLogo of pax2b
tfap4 1.98 small profile SeqLogo of tfap4
foxp1a+foxp1b+foxp3a_foxg1b_foxp2_foxd1+foxd7_foxo1a+foxo1b 1.92 small profile SeqLogo of foxp1a+foxp1b+foxp3a_foxg1b_foxp2_foxd1+foxd7_foxo1a+foxo1b
fli1b 1.92 small profile SeqLogo of fli1b
yy1a+yy1b 1.91 small profile SeqLogo of yy1a+yy1b
zeb1a+zeb1b 1.90 small profile SeqLogo of zeb1a+zeb1b
wt1a+wt1b 1.90 small profile SeqLogo of wt1a+wt1b
nrf1 1.88 small profile SeqLogo of nrf1
junba+junbb 1.86 small profile SeqLogo of junba+junbb
olig3_olig2+olig4_olig1 1.85 small profile SeqLogo of olig3_olig2+olig4_olig1
sox9a+sox9b 1.78 small profile SeqLogo of sox9a+sox9b
xbp1 1.77 small profile SeqLogo of xbp1
tal1 1.74 small profile SeqLogo of tal1
arnt2 1.70 small profile SeqLogo of arnt2
fev+fli1a_erg_etv2 1.70 small profile SeqLogo of fev+fli1a_erg_etv2
hoxb6a+hoxb6b 1.67 small profile SeqLogo of hoxb6a+hoxb6b
atf3+jdp2b 1.67 small profile SeqLogo of atf3+jdp2b
tfdp1a+tfdp1b 1.61 small profile SeqLogo of tfdp1a+tfdp1b
mycn 1.61 small profile SeqLogo of mycn
rreb1a+rreb1b 1.60 small profile SeqLogo of rreb1a+rreb1b
prrx1a+prrx1b 1.59 small profile SeqLogo of prrx1a+prrx1b
lhx3+lhx4 1.58 small profile SeqLogo of lhx3+lhx4
myb+mybl1 1.57 small profile SeqLogo of myb+mybl1
atf1 1.57 small profile SeqLogo of atf1
znf711 1.51 small profile SeqLogo of znf711
patz1 1.49 small profile SeqLogo of patz1
pou3f2a+pou3f2b+pou3f3a+pou3f3b 1.48 small profile SeqLogo of pou3f2a+pou3f2b+pou3f3a+pou3f3b
barx2 1.42 small profile SeqLogo of barx2
foxf1+foxf2a+foxf2b 1.42 small profile SeqLogo of foxf1+foxf2a+foxf2b
rest 1.41 small profile SeqLogo of rest
foxd2_foxd5 1.40 small profile SeqLogo of foxd2_foxd5
sp8a+sp8b_sp4_rsl1d1+sp3a_klf4 1.39 small profile SeqLogo of sp8a+sp8b_sp4_rsl1d1+sp3a_klf4
eomesa 1.39 small profile SeqLogo of eomesa
arid3a+arid3b+arid3c 1.39 small profile SeqLogo of arid3a+arid3b+arid3c
hnf4a+hnf4b 1.37 small profile SeqLogo of hnf4a+hnf4b
nr2e3 1.36 small profile SeqLogo of nr2e3
gsx2+pnx 1.35 small profile SeqLogo of gsx2+pnx
sp2 1.34 small profile SeqLogo of sp2
klf13+zgc:153115 1.33 small profile SeqLogo of klf13+zgc:153115
lef1 1.32 small profile SeqLogo of lef1
pax10+pax6a+pax6b 1.31 small profile SeqLogo of pax10+pax6a+pax6b
nr2f2 1.29 small profile SeqLogo of nr2f2
hnf4g 1.29 small profile SeqLogo of hnf4g
tbp 1.29 small profile SeqLogo of tbp
mafk 1.28 small profile SeqLogo of mafk
tbx5a+tbx5b 1.28 small profile SeqLogo of tbx5a+tbx5b
sox13 1.27 small profile SeqLogo of sox13
irf5 1.27 small profile SeqLogo of irf5
pou2f3 1.25 small profile SeqLogo of pou2f3
nfatc2a 1.24 small profile SeqLogo of nfatc2a
tgif1 1.24 small profile SeqLogo of tgif1
foxl1 1.24 small profile SeqLogo of foxl1
SPDEF 1.24 small profile SeqLogo of SPDEF
jund_batf 1.23 small profile SeqLogo of jund_batf
sox6 1.22 small profile SeqLogo of sox6
mecp2 1.21 small profile SeqLogo of mecp2
e2f2_e2f5 1.21 small profile SeqLogo of e2f2_e2f5
emx2+emx3 1.19 small profile SeqLogo of emx2+emx3
VDR+nr1i2_vdrb 1.18 small profile SeqLogo of VDR+nr1i2_vdrb
maza+mazb 1.18 small profile SeqLogo of maza+mazb
hoxa11b 1.17 small profile SeqLogo of hoxa11b
sox12 1.17 small profile SeqLogo of sox12
barhl1a+barhl1b 1.16 small profile SeqLogo of barhl1a+barhl1b
hnf1ba+hnf1bb 1.16 small profile SeqLogo of hnf1ba+hnf1bb
vsx1_shox_shox2_uncx4.1_lhx2a 1.15 small profile SeqLogo of vsx1_shox_shox2_uncx4.1_lhx2a
pou6f2 1.12 small profile SeqLogo of pou6f2
ikzf2 1.11 small profile SeqLogo of ikzf2
scrt1a+scrt1b+scrt2 1.09 small profile SeqLogo of scrt1a+scrt1b+scrt2
foxj1a+foxj1b 1.09 small profile SeqLogo of foxj1a+foxj1b
nkx2.3+nkx2.7 1.08 small profile SeqLogo of nkx2.3+nkx2.7
rargb_pparab 1.08 small profile SeqLogo of rargb_pparab
mybl2b 1.08 small profile SeqLogo of mybl2b
ets2 1.07 small profile SeqLogo of ets2
tbxta+tbxtb 1.07 small profile SeqLogo of tbxta+tbxtb
foxb1b+foxb2 1.07 small profile SeqLogo of foxb1b+foxb2
hoxb3a 1.06 small profile SeqLogo of hoxb3a
rx3 1.06 small profile SeqLogo of rx3
myog 1.06 small profile SeqLogo of myog
cebpa 1.05 small profile SeqLogo of cebpa
maff+mafga+mafgb 1.05 small profile SeqLogo of maff+mafga+mafgb
irf4a+irf4b 1.05 small profile SeqLogo of irf4a+irf4b
osr1 1.05 small profile SeqLogo of osr1
cux2b 1.04 small profile SeqLogo of cux2b
nfil3-4+si:dkey-172o19.2 1.04 small profile SeqLogo of nfil3-4+si:dkey-172o19.2
nr5a1a+nr5a2+nr5a5 1.04 small profile SeqLogo of nr5a1a+nr5a2+nr5a5
crx+otx1 1.04 small profile SeqLogo of crx+otx1
znf740b 1.04 small profile SeqLogo of znf740b
CABZ01090890.1+atf6 1.04 small profile SeqLogo of CABZ01090890.1+atf6
ikzf1 1.03 small profile SeqLogo of ikzf1
lhx2b+lhx9 1.03 small profile SeqLogo of lhx2b+lhx9
nkx3-1 1.03 small profile SeqLogo of nkx3-1
foxk1_foxj3 1.03 small profile SeqLogo of foxk1_foxj3
ebf3a-1+si:ch211-51e8.2 1.02 small profile SeqLogo of ebf3a-1+si:ch211-51e8.2
gata1b+gata2a 1.02 small profile SeqLogo of gata1b+gata2a
foxh1+foxq1a+foxq1b 1.02 small profile SeqLogo of foxh1+foxq1a+foxq1b
tp53 1.02 small profile SeqLogo of tp53
zbtb47b+znf652 1.01 small profile SeqLogo of zbtb47b+znf652
msx1a 1.01 small profile SeqLogo of msx1a
hmx2_hmx3a 1.00 small profile SeqLogo of hmx2_hmx3a
rxraa+rxrab+rxrba+rxrgb 0.99 small profile SeqLogo of rxraa+rxrab+rxrba+rxrgb
egr2a+egr2b 0.99 small profile SeqLogo of egr2a+egr2b
tcf3a+tcf3b 0.99 small profile SeqLogo of tcf3a+tcf3b
sox5 0.96 small profile SeqLogo of sox5
e2f8 0.96 small profile SeqLogo of e2f8
nr2f1b+nr2f5 0.95 small profile SeqLogo of nr2f1b+nr2f5
hoxa9a+hoxa9b 0.94 small profile SeqLogo of hoxa9a+hoxa9b
nkx2.2b 0.94 small profile SeqLogo of nkx2.2b
zbtb12.2 0.93 small profile SeqLogo of zbtb12.2
tefa+tefb 0.93 small profile SeqLogo of tefa+tefb
myca+mych 0.92 small profile SeqLogo of myca+mych
phf21ab+rfx5 0.92 small profile SeqLogo of phf21ab+rfx5
figla 0.92 small profile SeqLogo of figla
nr2e1 0.90 small profile SeqLogo of nr2e1
thraa+thrab 0.90 small profile SeqLogo of thraa+thrab
hoxa4a+hoxc3a 0.89 small profile SeqLogo of hoxa4a+hoxc3a
atf2+atf7a+atf7b_creb5a+creb5b 0.88 small profile SeqLogo of atf2+atf7a+atf7b_creb5a+creb5b
hoxc8a 0.87 small profile SeqLogo of hoxc8a
znf384l 0.87 small profile SeqLogo of znf384l
ctcf 0.87 small profile SeqLogo of ctcf
cdx1a+cdx1b 0.87 small profile SeqLogo of cdx1a+cdx1b
pou2f2a 0.87 small profile SeqLogo of pou2f2a
tfap2a+tfap2c 0.85 small profile SeqLogo of tfap2a+tfap2c
mafb+mafba+nrl 0.85 small profile SeqLogo of mafb+mafba+nrl
fosb+fosl2+si:ch211-153j24.3 0.85 small profile SeqLogo of fosb+fosl2+si:ch211-153j24.3
myf6 0.85 small profile SeqLogo of myf6
tbx15_tbx1_mgaa_tbx4 0.84 small profile SeqLogo of tbx15_tbx1_mgaa_tbx4
lmx1a 0.83 small profile SeqLogo of lmx1a
sp3b 0.83 small profile SeqLogo of sp3b
runx2a+runx2b 0.83 small profile SeqLogo of runx2a+runx2b
mef2d 0.82 small profile SeqLogo of mef2d
hoxc6a+hoxc6b 0.82 small profile SeqLogo of hoxc6a+hoxc6b
otx5 0.82 small profile SeqLogo of otx5
si:dkey-149i17.7_zic1 0.82 small profile SeqLogo of si:dkey-149i17.7_zic1
irf10+irf8+irf9 0.82 small profile SeqLogo of irf10+irf8+irf9
pknox2 0.82 small profile SeqLogo of pknox2
tfcp2+tfcp2l1+ubp1 0.82 small profile SeqLogo of tfcp2+tfcp2l1+ubp1
gfi1b 0.81 small profile SeqLogo of gfi1b
irf1b+irf2+irf2a 0.81 small profile SeqLogo of irf1b+irf2+irf2a
gbx2 0.81 small profile SeqLogo of gbx2
gfi1aa+gfi1ab 0.81 small profile SeqLogo of gfi1aa+gfi1ab
etv7 0.81 small profile SeqLogo of etv7
pax3a+pax3b 0.80 small profile SeqLogo of pax3a+pax3b
arxa 0.80 small profile SeqLogo of arxa
sox11a+sox11b 0.80 small profile SeqLogo of sox11a+sox11b
en1b_en2a+en2b_gbx1_emx1 0.78