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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for RhaS

Z-value: 1.29

Transcription factors associated with RhaS

Gene Symbol Gene ID Gene Info
rhaS
rhaS RhaS transcriptional activator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
rhaR0.069.0e-01Click!
rhaS0.069.0e-01Click!

Activity profile of RhaS motif

Sorted Z-values of RhaS motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
rhaT 11.11
rhaT
rhamnose / lyxose:H+ symporter
rhaBAD 7.22
rhaD
rhaA
rhaB
rhamnulose-1-phosphate aldolase
L-rhamnose isomerase
L-rhamnulose kinase
rhaSR 2.52
rhaS
rhaR
RhaS transcriptional activator
RhaR transcriptional activator

Network of associatons between targets according to the STRING database.

First level regulatory network of RhaS

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.4 7.2 GO:0019324 rhamnose metabolic process(GO:0019299) rhamnose catabolic process(GO:0019301) L-lyxose metabolic process(GO:0019324)
0.9 11.1 GO:0008645 hexose transport(GO:0008645)
0.0 2.5 GO:0006355 regulation of transcription, DNA-templated(GO:0006355) regulation of nucleic acid-templated transcription(GO:1903506) regulation of RNA biosynthetic process(GO:2001141)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 11.1 GO:0005886 plasma membrane(GO:0005886)
0.0 7.2 GO:0005829 cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 7.2 GO:0019200 carbohydrate kinase activity(GO:0019200)
0.4 11.1 GO:0015293 symporter activity(GO:0015293)
0.0 2.5 GO:0043565 sequence-specific DNA binding(GO:0043565)