GSE55662: Plasticity of transcriptional regulation under antibiotic stress
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
acrR
|
acrR | AcrR DNA-binding transcriptional repressor |
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| acrR | 0.95 | 2.8e-04 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| acrR | 6.29 |
acrR
|
AcrR DNA-binding transcriptional repressor |
|
| soxR | 4.63 |
soxR
|
SoxR DNA-binding transcriptional dual regulator |
|
| marRAB | 4.50 |
marB
marA
marR
|
multiple antibiotic resistance protein MarA DNA-binding transcriptional dual regulator MarR DNA-binding transcriptional repressor |
|
| acrAB | 0.03 |
acrB
acrA
|
AcrAB-TolC multidrug efflux pump - permease subunit AcrAB-TolC multidrug efflux pump - membrane fusion protein |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.5 | 4.5 | GO:0071236 | cellular response to antibiotic(GO:0071236) cellular response to toxic substance(GO:0097237) |
| 0.2 | 6.3 | GO:0042493 | response to drug(GO:0042493) |
| 0.1 | 4.6 | GO:0006979 | response to oxidative stress(GO:0006979) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 4.5 | GO:0030288 | outer membrane-bounded periplasmic space(GO:0030288) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.9 | 6.3 | GO:0008144 | drug binding(GO:0008144) |
| 0.3 | 4.6 | GO:0051537 | 2 iron, 2 sulfur cluster binding(GO:0051537) |
| 0.0 | 0.9 | GO:0000975 | regulatory region DNA binding(GO:0000975) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212) |
| 0.0 | 0.0 | GO:0015307 | drug:proton antiporter activity(GO:0015307) |