GSE55662: Plasticity of transcriptional regulation under antibiotic stress
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
lsrR
|
lsrR | LsrR DNA-binding transcriptional repressor |
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| lsrR | 0.96 | 1.1e-04 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| lsrACDBFG-tam | 5.99 |
lsrA
lsrC
lsrB
lsrD
lsrG
lsrF
tam
|
AI-2 ABC transporter - ATP binding subunit Autoinducer-2 ABC transporter - membrane subunit autoinducer-2 ABC transporter - periplasmic binding protein Autoinducer-2 ABC transporter - membrane subunit phospho-AI-2 isomerase 3-hydroxy-2,4-pentadione 5-phosphate thiolase trans-aconitate 2-methyltransferase |
|
| lsrRK | 4.01 |
lsrK
lsrR
|
autoinducer-2 kinase LsrR DNA-binding transcriptional repressor |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.3 | 4.0 | GO:0009372 | quorum sensing(GO:0009372) |
| 0.1 | 6.0 | GO:0055114 | oxidation-reduction process(GO:0055114) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 6.0 | GO:0016021 | integral component of membrane(GO:0016021) |
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.4 | 6.0 | GO:0015145 | monosaccharide transmembrane transporter activity(GO:0015145) |
| 0.2 | 4.0 | GO:0000987 | bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding(GO:0000986) core promoter proximal region sequence-specific DNA binding(GO:0000987) core promoter proximal region DNA binding(GO:0001159) |