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GSE55662: Plasticity of transcriptional regulation under antibiotic stress
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Results for PaaX
Z-value: 0.69
Transcription factors associated with PaaX
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
paaX
|
paaX | PaaX DNA-binding transcriptional repressor |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| paaX | -0.41 | 3.2e-01 | Click! |
Activity profile of PaaX motif
Sorted Z-values of PaaX motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| paaZ | 3.26 |
paaZ
|
oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase |
|
| paaABCDEFGHIJK | 2.89 |
paaB
paaC
paaA
paaF
paaG
paaD
paaE
paaJ
paaK
paaH
paaI
|
ring 1,2-phenylacetyl-CoA epoxidase subunit ring 1,2-phenylacetyl-CoA epoxidase, structural subunit ring 1,2-phenylacetyl-CoA epoxidase, monooxygenase subunit predicted 2,3-dehydroadipyl-CoA hydratase predicted ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) phenylacetate degradation protein ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit β-ketoadipyl-CoA thiolase phenylacetate-CoA ligase 3-hydroxyadipyl-CoA dehydrogenase (NAD+) phenylacetyl-CoA thioesterase |
Network of associatons between targets according to the STRING database.
First level regulatory network of PaaX
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 2.0 | 6.1 | GO:0010124 | phenylacetate catabolic process(GO:0010124) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.2 | 6.1 | GO:0004300 | enoyl-CoA hydratase activity(GO:0004300) |