ISMARA results: MlrA

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GSE55662: Plasticity of transcriptional regulation under antibiotic stress

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Results for MlrA

Z-value: 0.47

Transcription factors associated with MlrA

Gene Symbol	Gene ID	Gene Info
mlrA RegulonDB EcoCyc	mlrA	MlrA DNA binding transcriptional activator

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
mlrA		-0.69	5.6e-02	Click!

Activity profile of MlrA motif

Sorted Z-values of MlrA motif

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Promoter	Log-likelihood	Gene	Gene Info
rplU-rpmA Show fit	2.28	rpmA RegulonDB EcoCyc Show fit rplU RegulonDB EcoCyc Show fit	50S ribosomal subunit protein L27 50S ribosomal subunit protein L21
rplU-rpmA-yhbE-obgE Show fit	1.30	rpmA RegulonDB EcoCyc Show fit yhbE RegulonDB EcoCyc Show fit rplU RegulonDB EcoCyc Show fit obgE RegulonDB EcoCyc Show fit	50S ribosomal subunit protein L27 inner membrane protein YhbE 50S ribosomal subunit protein L21 GTPase involved in chromosome partitioning and ribosome assembly
ibaG Show fit	0.62	ibaG RegulonDB EcoCyc Show fit	predicted DNA-binding transcriptional regulator

Showing 1 to 3 of 3 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of MlrA

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.3	1.3	GO:0022611	dormancy process(GO:0022611)
0.0	0.6	GO:0001101	response to acid chemical(GO:0001101)

Showing 1 to 2 of 2 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.3	3.6	GO:0022625	large ribosomal subunit(GO:0015934) cytosolic large ribosomal subunit(GO:0022625)

Showing 1 to 1 of 1 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.2	3.6	GO:0003735	structural constituent of ribosome(GO:0003735)

Showing 1 to 1 of 1 entries

Results for MlrA

Z-value: 0.47

Transcription factors associated with MlrA

Activity-expression correlation:

Activity profile of MlrA motif

Sorted Z-values of MlrA motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of MlrA

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: