Gene Symbol | Gene ID | Gene Info |
---|---|---|
GAL4
|
S000006169 | DNA-binding transcription factor required for activating GAL genes |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
YJL045W | 15.21 |
Minor succinate dehydrogenase isozyme; homologous to Sdh1p, the major isozyme reponsible for the oxidation of succinate and transfer of electrons to ubiquinone; induced during the diauxic shift in a Cat8p-dependent manner |
||
YJR048W | 7.07 |
CYC1
|
Cytochrome c, isoform 1; electron carrier of the mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration |
|
YOL052C-A | 6.92 |
DDR2
|
Multistress response protein, expression is activated by a variety of xenobiotic agents and environmental or physiological stresses |
|
YBR019C | 6.74 |
GAL10
|
UDP-glucose-4-epimerase, catalyzes the interconversion of UDP-galactose and UDP-D-glucose in galactose metabolism; also catalyzes the conversion of alpha-D-glucose or alpha-D-galactose to their beta-anomers |
|
YOR348C | 6.46 |
PUT4
|
Proline permease, required for high-affinity transport of proline; also transports the toxic proline analog azetidine-2-carboxylate (AzC); PUT4 transcription is repressed in ammonia-grown cells |
|
YNL117W | 6.30 |
MLS1
|
Malate synthase, enzyme of the glyoxylate cycle, involved in utilization of non-fermentable carbon sources; expression is subject to carbon catabolite repression; localizes in peroxisomes during growth in oleic acid medium |
|
YGR067C | 6.11 |
Putative protein of unknown function; contains a zinc finger motif similar to that of Adr1p |
||
YLR312C | 6.11 |
QNQ1
|
Protein of unknown function; null mutant quiescent and non-quiescent cells exhibit reduced reproductive capacity |
|
YMR105C | 5.81 |
PGM2
|
Phosphoglucomutase, catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; functions as the acceptor for a Glc-phosphotransferase |
|
YGR183C | 5.60 |
QCR9
|
Subunit 9 of the ubiquinol cytochrome-c reductase complex, which is a component of the mitochondrial inner membrane electron transport chain; required for electron transfer at the ubiquinol oxidase site of the complex |
|
YLR122C | 5.24 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR123C |
||
YEL039C | 4.98 |
CYC7
|
Cytochrome c isoform 2, expressed under hypoxic conditions; electron carrier of the mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration |
|
YMR206W | 4.73 |
Putative protein of unknown function; YMR206W is not an essential gene |
||
YDR342C | 4.69 |
HXT7
|
High-affinity glucose transporter of the major facilitator superfamily, nearly identical to Hxt6p, expressed at high basal levels relative to other HXTs, expression repressed by high glucose levels |
|
YDR277C | 4.68 |
MTH1
|
Negative regulator of the glucose-sensing signal transduction pathway, required for repression of transcription by Rgt1p; interacts with Rgt1p and the Snf3p and Rgt2p glucose sensors; phosphorylated by Yck1p, triggering Mth1p degradation |
|
YPR036W-A | 4.61 |
Protein of unknown function; transcription is regulated by Pdr1p |
||
YOR120W | 4.59 |
GCY1
|
Putative NADP(+) coupled glycerol dehydrogenase, proposed to be involved in an alternative pathway for glycerol catabolism; member of the aldo-keto reductase (AKR) family |
|
YBR020W | 4.54 |
GAL1
|
Galactokinase, phosphorylates alpha-D-galactose to alpha-D-galactose-1-phosphate in the first step of galactose catabolism; expression regulated by Gal4p |
|
YBR222C | 4.44 |
PCS60
|
Peroxisomal AMP-binding protein, localizes to both the peroxisomal peripheral membrane and matrix, expression is highly inducible by oleic acid, similar to E. coli long chain acyl-CoA synthetase |
|
YBR018C | 4.30 |
GAL7
|
Galactose-1-phosphate uridyl transferase, synthesizes glucose-1-phosphate and UDP-galactose from UDP-D-glucose and alpha-D-galactose-1-phosphate in the second step of galactose catabolism |
|
YLR123C | 4.29 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR122C; contains characteristic aminoacyl-tRNA motif |
||
YLR038C | 4.19 |
COX12
|
Subunit VIb of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain; required for assembly of cytochrome c oxidase but not required for activity after assembly; phosphorylated |
|
YPR023C | 4.01 |
EAF3
|
Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition |
|
YKL217W | 3.96 |
JEN1
|
Lactate transporter, required for uptake of lactate and pyruvate; phosphorylated; expression is derepressed by transcriptional activator Cat8p during respiratory growth, and repressed in the presence of glucose, fructose, and mannose |
|
YKL103C | 3.83 |
LAP4
|
Vacuolar aminopeptidase, often used as a marker protein in studies of autophagy and cytosol to vacuole targeting (CVT) pathway |
|
YCL057C-A | 3.82 |
Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies |
||
YDR343C | 3.69 |
HXT6
|
High-affinity glucose transporter of the major facilitator superfamily, nearly identical to Hxt7p, expressed at high basal levels relative to other HXTs, repression of expression by high glucose requires SNF3 |
|
YER103W | 3.51 |
SSA4
|
Heat shock protein that is highly induced upon stress; plays a role in SRP-dependent cotranslational protein-membrane targeting and translocation; member of the HSP70 family; cytoplasmic protein that concentrates in nuclei upon starvation |
|
YNL074C | 3.40 |
MLF3
|
Serine-rich protein of unknown function; overproduction suppresses the growth inhibition caused by exposure to the immunosuppressant leflunomide |
|
YKR097W | 3.37 |
PCK1
|
Phosphoenolpyruvate carboxykinase, key enzyme in gluconeogenesis, catalyzes early reaction in carbohydrate biosynthesis, glucose represses transcription and accelerates mRNA degradation, regulated by Mcm1p and Cat8p, located in the cytosol |
|
YOR139C | 3.35 |
Hypothetical protein |
||
YOL051W | 3.32 |
GAL11
|
Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; affects transcription by acting as target of activators and repressors |
|
YLR377C | 3.29 |
FBP1
|
Fructose-1,6-bisphosphatase, key regulatory enzyme in the gluconeogenesis pathway, required for glucose metabolism |
|
YJL217W | 3.24 |
Cytoplasmic protein of unknown function; expression induced by calcium shortage and via the copper sensing transciption factor Mac1p during conditons of copper deficiency; mRNA is cell cycle regulated, peaking in G1 phase |
||
YER039C-A | 3.23 |
Putative protein of unknown function; YER039C-A is not an essential gene |
||
YMR103C | 3.21 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data |
||
YJR146W | 3.19 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HMS2 |
||
YNL190W | 3.17 |
Cell wall protein of unknown function; proposed role as a hydrophilin induced by osmotic stress; contains a putative GPI-attachment site |
||
YER158C | 3.06 |
Protein of unknown function, has similarity to Afr1p; potentially phosphorylated by Cdc28p |
||
YOR140W | 2.99 |
SFL1
|
Transcriptional repressor and activator; involved in repression of flocculation-related genes, and activation of stress responsive genes; negatively regulated by cAMP-dependent protein kinase A subunit Tpk2p |
|
YKL148C | 2.97 |
SDH1
|
Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxidation of succinate to the transfer of electrons to ubiquinone |
|
YLR327C | 2.94 |
TMA10
|
Protein of unknown function that associates with ribosomes |
|
YLR125W | 2.91 |
Putative protein of unknown function; mutant has decreased Ty3 transposition; YLR125W is not an essential gene |
||
YNL240C | 2.90 |
NAR1
|
Nuclear architecture related protein; component of the cytosolic iron-sulfur (FeS) protein assembly machinery, required for maturation of cytosolic and nuclear FeS proteins; homologous to human Narf |
|
YLR174W | 2.90 |
IDP2
|
Cytosolic NADP-specific isocitrate dehydrogenase, catalyzes oxidation of isocitrate to alpha-ketoglutarate; levels are elevated during growth on non-fermentable carbon sources and reduced during growth on glucose |
|
YLR152C | 2.88 |
Putative protein of unknown function; YLR152C is not an essential gene |
||
YPL230W | 2.84 |
USV1
|
Putative transcription factor containing a C2H2 zinc finger; mutation affects transcriptional regulation of genes involved in protein folding, ATP binding, and cell wall biosynthesis |
|
YJR095W | 2.83 |
SFC1
|
Mitochondrial succinate-fumarate transporter, transports succinate into and fumarate out of the mitochondrion; required for ethanol and acetate utilization |
|
YLR124W | 2.74 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data |
||
YKR067W | 2.72 |
GPT2
|
Glycerol-3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase located in lipid particles and the ER; involved in the stepwise acylation of glycerol-3-phosphate and dihydroxyacetone in lipid biosynthesis |
|
YMR056C | 2.70 |
AAC1
|
Mitochondrial inner membrane ADP/ATP translocator, exchanges cytosolic ADP for mitochondrially synthesized ATP; phosphorylated; Aac1p is a minor isoform while Pet9p is the major ADP/ATP translocator |
|
YDR009W | 2.67 |
GAL3
|
Transcriptional regulator involved in activation of the GAL genes in response to galactose; forms a complex with Gal80p to relieve Gal80p inhibition of Gal4p; binds galactose and ATP but does not have galactokinase activity |
|
YLR111W | 2.63 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data |
||
YKL102C | 2.62 |
Dubious open reading frame unlikely to encode a functional protein; deletion confers sensitivity to citric acid; predicted protein would include a thiol-disulfide oxidoreductase active site |
||
YHR139C | 2.56 |
SPS100
|
Protein required for spore wall maturation; expressed during sporulation; may be a component of the spore wall |
|
YFR033C | 2.46 |
QCR6
|
Subunit 6 of the ubiquinol cytochrome-c reductase complex, which is a component of the mitochondrial inner membrane electron transport chain; highly acidic protein; required for maturation of cytochrome c1 |
|
YDL010W | 2.39 |
GRX6
|
Cis-golgi localized monothiol glutaredoxin that binds an iron-sulfur cluster; more similar in activity to dithiol than other monothiol glutaredoxins; involved in the oxidative stress response; functional overlap with GRX6 |
|
YER101C | 2.36 |
AST2
|
Protein that may have a role in targeting of plasma membrane [H+]ATPase (Pma1p) to the plasma membrane, as suggested by analysis of genetic interactions |
|
YKL093W | 2.35 |
MBR1
|
Protein involved in mitochondrial functions and stress response; overexpression suppresses growth defects of hap2, hap3, and hap4 mutants |
|
YDL011C | 2.33 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORF YDL010W |
||
YEL020C | 2.31 |
Hypothetical protein with low sequence identity to Pdc1p |
||
YKR066C | 2.29 |
CCP1
|
Mitochondrial cytochrome-c peroxidase; degrades reactive oxygen species in mitochondria, involved in the response to oxidative stress |
|
YPR065W | 2.28 |
ROX1
|
Heme-dependent repressor of hypoxic genes; contains an HMG domain that is responsible for DNA bending activity |
|
YBL045C | 2.28 |
COR1
|
Core subunit of the ubiquinol-cytochrome c reductase complex (bc1 complex), which is a component of the mitochondrial inner membrane electron transport chain |
|
YJL156W-A | 2.28 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data |
||
YLR402W | 2.24 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data |
||
YNL144C | 2.23 |
Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YNL144C is not an essential gene |
||
YLR047C | 2.23 |
FRE8
|
Protein with sequence similarity to iron/copper reductases, involved in iron homeostasis; deletion mutant has iron deficiency/accumulation growth defects; expression increased in the absence of copper-responsive transcription factor Mac1p |
|
YOR065W | 2.22 |
CYT1
|
Cytochrome c1, component of the mitochondrial respiratory chain; expression is regulated by the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex |
|
YLR403W | 2.20 |
SFP1
|
Transcription factor that controls expression of many ribosome biogenesis genes in response to nutrients and stress, regulates G2/M transitions during mitotic cell cycle and DNA-damage response, involved in cell size modulation |
|
YAR023C | 2.19 |
Putative integral membrane protein, member of DUP240 gene family |
||
YLR281C | 2.17 |
Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YLR281C is not an essential gene |
||
YLR304C | 2.17 |
ACO1
|
Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitochondrial genome maintenance; phosphorylated; component of the mitochondrial nucleoid; mutation leads to glutamate auxotrophy |
|
YDL138W | 2.14 |
RGT2
|
Plasma membrane glucose receptor, highly similar to Snf3p; both Rgt2p and Snf3p serve as transmembrane glucose sensors generating an intracellular signal that induces expression of glucose transporter (HXT) genes |
|
YLR280C | 2.13 |
Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data |
||
YML051W | 2.12 |
GAL80
|
Transcriptional regulator involved in the repression of GAL genes in the absence of galactose; inhibits transcriptional activation by Gal4p; inhibition relieved by Gal3p or Gal1p binding |
|
YNL055C | 2.11 |
POR1
|
Mitochondrial porin (voltage-dependent anion channel), outer membrane protein required for the maintenance of mitochondrial osmotic stability and mitochondrial membrane permeability; phosphorylated |
|
YLR240W | 2.04 |
VPS34
|
Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate; forms membrane-associated signal transduction complex with Vps15p to regulate protein sorting; activated by the GTP-bound form of Gpa1p |
|
YHR086W | 2.04 |
NAM8
|
RNA binding protein, component of the U1 snRNP protein; mutants are defective in meiotic recombination and in formation of viable spores, involved in the formation of DSBs through meiosis-specific splicing of MER2 pre-mRNA |
|
YOR374W | 2.02 |
ALD4
|
Mitochondrial aldehyde dehydrogenase, required for growth on ethanol and conversion of acetaldehyde to acetate; phosphorylated; activity is K+ dependent; utilizes NADP+ or NAD+ equally as coenzymes; expression is glucose repressed |
|
YOR138C | 1.96 |
RUP1
|
Protein involved in regulation of Rsp5p, which is an essential HECT ubiquitin ligase; required for binding of Rsp5p to Ubp2p; contains an UBA domain |
|
YPR027C | 1.94 |
Putative protein of unknown function |
||
YBR033W | 1.92 |
EDS1
|
Putative zinc cluster protein; YBR033W is not an essential gene |
|
YHL040C | 1.90 |
ARN1
|
Transporter, member of the ARN family of transporters that specifically recognize siderophore-iron chelates; responsible for uptake of iron bound to ferrirubin, ferrirhodin, and related siderophores |
|
YLR252W | 1.90 |
Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified gene SYM1, a mitochondrial protein involved in ethanol metabolism |
||
YDR259C | 1.90 |
YAP6
|
Putative basic leucine zipper (bZIP) transcription factor; overexpression increases sodium and lithium tolerance |
|
YBL100C | 1.86 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; almost completely overlaps the 5' end of ATP1 |
||
YLL029W | 1.86 |
FRA1
|
Protein involved in negative regulation of transcription of iron regulon; forms an iron independent complex with Fra2p, Grx3p, and Grx4p; cytosolic; mutant fails to repress transcription of iron regulon and is defective in spore formation |
|
YGL134W | 1.85 |
PCL10
|
Pho85p cyclin; recruits, activates, and targets Pho85p cyclin-dependent protein kinase to its substrate |
|
YPR196W | 1.85 |
Putative maltose activator |
||
YFR015C | 1.83 |
GSY1
|
Glycogen synthase with similarity to Gsy2p, the more highly expressed yeast homolog; expression induced by glucose limitation, nitrogen starvation, environmental stress, and entry into stationary phase |
|
YDL012C | 1.78 |
Plasma membrane protein of unknown function; YDL012C is not an essential gene |
||
YBL099W | 1.71 |
ATP1
|
Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; phosphorylated |
|
YPL135W | 1.70 |
ISU1
|
Conserved protein of the mitochondrial matrix, performs a scaffolding function during assembly of iron-sulfur clusters, interacts physically and functionally with yeast frataxin (Yfh1p); isu1 isu2 double mutant is inviable |
|
YLR202C | 1.70 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YLR201C; ORF contains a putative intron |
||
YKL129C | 1.69 |
MYO3
|
One of two type I myosins; localizes to actin cortical patches; deletion of MYO3 has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization |
|
YPR061C | 1.68 |
JID1
|
Probable Hsp40p co-chaperone, has a DnaJ-like domain and appears to be involved in ER-associated degradation of misfolded proteins containing a tightly folded cytoplasmic domain; inhibits replication of Brome mosaic virus in S. cerevisiae |
|
YOL131W | 1.66 |
Putative protein of unknown function |
||
YHR092C | 1.66 |
HXT4
|
High-affinity glucose transporter of the major facilitator superfamily, expression is induced by low levels of glucose and repressed by high levels of glucose |
|
YMR250W | 1.62 |
GAD1
|
Glutamate decarboxylase, converts glutamate into gamma-aminobutyric acid (GABA) during glutamate catabolism; involved in response to oxidative stress |
|
YLR334C | 1.60 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps a stand-alone long terminal repeat sequence whose presence indicates a retrotransposition event occurred here |
||
YHR211W | 1.60 |
FLO5
|
Lectin-like cell wall protein (flocculin) involved in flocculation, binds to mannose chains on the surface of other cells, confers floc-forming ability that is chymotrypsin resistant but heat labile; similar to Flo1p |
|
YLR201C | 1.60 |
COQ9
|
Protein required for ubiquinone (coenzyme Q) biosynthesis and respiratory growth; localizes to the matrix face of the mitochondrial inner membrane in a large complex with ubiquinone biosynthetic enzymes |
|
YDL222C | 1.60 |
FMP45
|
Integral membrane protein localized to mitochondria (untagged protein) and eisosomes, immobile patches at the cortex associated with endocytosis; sporulation and sphingolipid content are altered in mutants; has homologs SUR7 and YNL194C |
|
YDR096W | 1.59 |
GIS1
|
JmjC domain-containing histone demethylase; transcription factor involved in the expression of genes during nutrient limitation; also involved in the negative regulation of DPP1 and PHR1 |
|
YHR015W | 1.58 |
MIP6
|
Putative RNA-binding protein, interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export |
|
YOL052C | 1.56 |
SPE2
|
S-adenosylmethionine decarboxylase, required for the biosynthesis of spermidine and spermine; cells lacking Spe2p require spermine or spermidine for growth in the presence of oxygen but not when grown anaerobically |
|
YPR024W | 1.54 |
YME1
|
Subunit, with Mgr1p, of the mitochondrial inner membrane i-AAA protease complex, which is responsible for degradation of unfolded or misfolded mitochondrial gene products; mutation causes an elevated rate of mitochondrial turnover |
|
YOR346W | 1.51 |
REV1
|
Deoxycytidyl transferase, forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p; involved in repair of abasic sites in damaged DNA |
|
YDR347W | 1.50 |
MRP1
|
Mitochondrial ribosomal protein of the small subunit; MRP1 exhibits genetic interactions with PET122, encoding a COX3-specific translational activator, and with PET123, encoding a small subunit mitochondrial ribosomal protein |
|
YNL196C | 1.48 |
SLZ1
|
Sporulation-specific protein with a leucine zipper motif |
|
YER150W | 1.48 |
SPI1
|
GPI-anchored cell wall protein involved in weak acid resistance; basal expression requires Msn2p/Msn4p; expression is induced under conditions of stress and during the diauxic shift; similar to Sed1p |
|
YDR379C-A | 1.48 |
Hypothetical protein identified by homology. See FEBS Letters [2000] 487:31-36. |
||
YJR147W | 1.44 |
HMS2
|
Protein with similarity to heat shock transcription factors; overexpression suppresses the pseudohyphal filamentation defect of a diploid mep1 mep2 homozygous null mutant |
|
YNL328C | 1.44 |
MDJ2
|
Constituent of the mitochondrial import motor associated with the presequence translocase; function overlaps with that of Pam18p; stimulates the ATPase activity of Ssc1p to drive mitochondrial import; contains a J domain |
|
YNL142W | 1.42 |
MEP2
|
Ammonium permease involved in regulation of pseudohyphal growth; belongs to a ubiquitous family of cytoplasmic membrane proteins that transport only ammonium (NH4+); expression is under the nitrogen catabolite repression regulation |
|
YNR063W | 1.42 |
Putative zinc-cluster protein of unknown function |
||
YOR345C | 1.41 |
Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene REV1; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2 |
||
YLL049W | 1.40 |
LDB18
|
Protein of unknown function; null mutant shows a reduced affinity for the alcian blue dye suggesting a decreased net negative charge of the cell surface |
|
YOL110W | 1.40 |
SHR5
|
Subunit of a palmitoyltransferase, composed of Shr5p and Erf2p, that adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; palmitoylation is required for Ras2p membrane localization |
|
YOR378W | 1.36 |
Putative protein of unknown function; belongs to the DHA2 family of drug:H+ antiporters; YOR378W is not an essential gene |
||
YKL146W | 1.33 |
AVT3
|
Vacuolar transporter, exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters |
|
YKL147C | 1.32 |
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; partially overlaps the verified gene AVT3 |
||
YPR192W | 1.30 |
AQY1
|
Spore-specific water channel that mediates the transport of water across cell membranes, developmentally controlled; may play a role in spore maturation, probably by allowing water outflow, may be involved in freeze tolerance |
|
YDR090C | 1.26 |
Putative protein of unknown function |
||
YPR064W | 1.22 |
Dubious open reading frame, unlikely to encode a functional protein; based on available experimental and comparative sequence data |
||
YHR008C | 1.16 |
SOD2
|
Mitochondrial superoxide dismutase, protects cells against oxygen toxicity; phosphorylated |
|
YIR027C | 1.13 |
DAL1
|
Allantoinase, converts allantoin to allantoate in the first step of allantoin degradation; expression sensitive to nitrogen catabolite repression |
|
YOL100W | 1.10 |
PKH2
|
Serine/threonine protein kinase involved in sphingolipid-mediated signaling pathway that controls endocytosis; activates Ypk1p and Ykr2p, components of signaling cascade required for maintenance of cell wall integrity; redundant with Pkh1p |
|
YBL015W | 1.09 |
ACH1
|
Acetyl-coA hydrolase, primarily localized to mitochondria; phosphorylated; required for acetate utilization and for diploid pseudohyphal growth |
|
YDR536W | 1.08 |
STL1
|
Glycerol proton symporter of the plasma membrane, subject to glucose-induced inactivation, strongly but transiently induced when cells are subjected to osmotic shock |
|
YER091C-A | 1.07 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data |
||
YER088C | 1.06 |
DOT6
|
Protein of unknown function, involved in telomeric gene silencing and filamentation |
|
YGL180W | 1.06 |
ATG1
|
Protein serine/threonine kinase required for vesicle formation in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway; structurally required for pre-autophagosome formation; during autophagy forms a complex with Atg13p and Atg17p |
|
YDR216W | 1.06 |
ADR1
|
Carbon source-responsive zinc-finger transcription factor, required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization |
|
YOR388C | 1.05 |
FDH1
|
NAD(+)-dependent formate dehydrogenase, may protect cells from exogenous formate |
|
YGL081W | 1.04 |
Putative protein of unknown function; non-essential gene; interacts genetically with CHS5, a gene involved in chitin biosynthesis |
||
YNL241C | 1.03 |
ZWF1
|
Glucose-6-phosphate dehydrogenase (G6PD), catalyzes the first step of the pentose phosphate pathway; involved in adapting to oxidatve stress; homolog of the human G6PD which is deficient in patients with hemolytic anemia |
|
YOR049C | 1.01 |
RSB1
|
Suppressor of sphingoid long chain base (LCB) sensitivity of an LCB-lyase mutation; putative integral membrane transporter or flippase that may transport LCBs from the cytoplasmic side toward the extracytoplasmic side of the membrane |
|
YPL156C | 1.01 |
PRM4
|
Pheromone-regulated protein, predicted to have 1 transmembrane segment; transcriptionally regulated by Ste12p during mating and by Cat8p during the diauxic shift |
|
YGL188C | 0.98 |
Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data |
||
YEL012W | 0.97 |
UBC8
|
Ubiquitin-conjugating enzyme that negatively regulates gluconeogenesis by mediating the glucose-induced ubiquitination of fructose-1,6-bisphosphatase (FBPase); cytoplasmic enzyme that catalyzes the ubiquitination of histones in vitro |
|
YPR117W | 0.97 |
Putative protein of unknown function |
||
YFL024C | 0.96 |
EPL1
|
Component of NuA4, which is an essential histone H4/H2A acetyltransferase complex; homologous to Drosophila Enhancer of Polycomb |
|
YHR217C | 0.95 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; located in the telomeric region TEL08R. |
||
YDL139C | 0.95 |
SCM3
|
Nonhistone component of centromeric chromatin that binds stoichiometrically to CenH3-H4 histones, required for kinetochore assembly; contains nuclear export signal (NES); required for G2/M progression and localization of Cse4p |
|
YJR004C | 0.91 |
SAG1
|
Alpha-agglutinin of alpha-cells, binds to Aga1p during agglutination, N-terminal half is homologous to the immunoglobulin superfamily and contains binding site for a-agglutinin, C-terminal half is highly glycosylated and contains GPI anchor |
|
YIL162W | 0.91 |
SUC2
|
Invertase, sucrose hydrolyzing enzyme; a secreted, glycosylated form is regulated by glucose repression, and an intracellular, nonglycosylated enzyme is produced constitutively |
|
YLR121C | 0.90 |
YPS3
|
Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor |
|
YPL067C | 0.87 |
Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YPL067C is not an essential gene |
||
YFL021W | 0.87 |
GAT1
|
Transcriptional activator of genes involved in nitrogen catabolite repression; contains a GATA-1-type zinc finger DNA-binding motif; activity and localization regulated by nitrogen limitation and Ure2p |
|
YLR055C | 0.86 |
SPT8
|
Subunit of the SAGA transcriptional regulatory complex but not present in SAGA-like complex SLIK/SALSA, required for SAGA-mediated inhibition at some promoters |
|
YHR050W | 0.85 |
SMF2
|
Divalent metal ion transporter involved in manganese homeostasis; has broad specificity for di-valent and tri-valent metals; post-translationally regulated by levels of metal ions; member of the Nramp family of metal transport proteins |
|
YGL053W | 0.85 |
PRM8
|
Pheromone-regulated protein with 2 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; forms a complex with Prp9p in the ER; member of DUP240 gene family |
|
YFL011W | 0.85 |
HXT10
|
Putative hexose transporter, expressed at low levels and expression is repressed by glucose |
|
YOR072W | 0.85 |
Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the dubious gene YOR072W-A; diploid deletion strains are methotrexate, paraquat and wortmannin sensitive |
||
YDL182W | 0.84 |
LYS20
|
Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, which is the first step in the lysine biosynthesis pathway; highly similar to the other isozyme, Lys21p |
|
YPR013C | 0.82 |
Putative zinc finger protein; YPR013C is not an essential gene |
||
YLR164W | 0.82 |
Mitochondrial inner membrane of unknown function; similar to Tim18p and Sdh4p; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner |
||
YFR053C | 0.82 |
HXK1
|
Hexokinase isoenzyme 1, a cytosolic protein that catalyzes phosphorylation of glucose during glucose metabolism; expression is highest during growth on non-glucose carbon sources; glucose-induced repression involves the hexokinase Hxk2p |
|
YKL065W-A | 0.82 |
Putative protein of unknown function |
||
YMR057C | 0.81 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF AAC1 |
||
YMR194C-B | 0.81 |
Putative protein of unknown function |
||
YPL154C | 0.80 |
PEP4
|
Vacuolar aspartyl protease (proteinase A), required for the posttranslational precursor maturation of vacuolar proteinases; important for protein turnover after oxidative damage; synthesized as a zymogen, self-activates |
|
YBL033C | 0.79 |
RIB1
|
GTP cyclohydrolase II; catalyzes the first step of the riboflavin biosynthesis pathway |
|
YIL065C | 0.79 |
FIS1
|
Mitochondrial outer membrane protein involved in membrane fission, required for localization of Dnm1p and Mdv1p during mitochondrial division; mediates ethanol-induced apoptosis and ethanol-induced mitochondrial fragmentation |
|
YDL140C | 0.76 |
RPO21
|
RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime |
|
YOR071C | 0.75 |
NRT1
|
High-affinity nicotinamide riboside transporter; also transports thiamine with low affinity; shares sequence similarity with Thi7p and Thi72p; proposed to be involved in 5-fluorocytosine sensitivity |
|
YNL092W | 0.75 |
Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family; YNL092W is not an essential gene |
||
YBR201C-A | 0.74 |
Putative protein of unknown function |
||
YNL239W | 0.74 |
LAP3
|
Cysteine aminopeptidase with homocysteine-thiolactonase activity; protects cells against homocysteine toxicity; has bleomycin hydrolase activity in vitro; transcription is regulated by galactose via Gal4p; orthologous to human BLMH |
|
YBR051W | 0.73 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partiallly overlaps the REG2/YBR050C regulatory subunit of the Glc7p type-1 protein phosphatase |
||
YPR028W | 0.72 |
YOP1
|
Membrane protein that interacts with Yip1p to mediate membrane traffic; overexpression results in cell death and accumulation of internal cell membranes; regulates vesicular traffic in stressed cells |
|
YDR058C | 0.71 |
TGL2
|
Protein with lipolytic activity towards triacylglycerols and diacylglycerols when expressed in E. coli; role in yeast lipid degradation is unclear |
|
YNL143C | 0.71 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data |
||
YBR050C | 0.70 |
REG2
|
Regulatory subunit of the Glc7p type-1 protein phosphatase; involved with Reg1p, Glc7p, and Snf1p in regulation of glucose-repressible genes, also involved in glucose-induced proteolysis of maltose permease |
|
YNL180C | 0.69 |
RHO5
|
Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins, likely involved in protein kinase C (Pkc1p)-dependent signal transduction pathway that controls cell integrity |
|
YGR087C | 0.69 |
PDC6
|
Minor isoform of pyruvate decarboxylase, decarboxylates pyruvate to acetaldehyde, involved in amino acid catabolism; transcription is glucose- and ethanol-dependent, and is strongly induced during sulfur limitation |
|
YNL160W | 0.67 |
YGP1
|
Cell wall-related secretory glycoprotein; induced by nutrient deprivation-associated growth arrest and upon entry into stationary phase; may be involved in adaptation prior to stationary phase entry; has similarity to Sps100p |
|
YOR072W-A | 0.67 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR072W; originally identified by fungal homology and RT-PCR |
||
YAR027W | 0.66 |
UIP3
|
Putative integral membrane protein of unknown function; interacts with Ulp1p at the nuclear periphery; member of DUP240 gene family |
|
YGR286C | 0.65 |
BIO2
|
Biotin synthase, catalyzes the conversion of dethiobiotin to biotin, which is the last step of the biotin biosynthesis pathway; complements E. coli bioB mutant |
|
YOR389W | 0.64 |
Putative protein of unknown function; expression regulated by copper levels |
||
YNL179C | 0.63 |
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; deletion in cyr1 mutant results in loss of stress resistance |
||
YHR082C | 0.63 |
KSP1
|
Nonessential putative serine/threonine protein kinase of unknown cellular role; overproduction causes allele-specific suppression of the prp20-10 mutation |
|
YHR218W | 0.63 |
Helicase-like protein encoded within the telomeric Y' element |
||
YDL113C | 0.63 |
ATG20
|
Sorting nexin family member required for the cytoplasm-to-vacuole targeting (Cvt) pathway and for endosomal sorting; has a Phox homology domain that binds phosphatidylinositol-3-phosphate; interacts with Snx4p; potential Cdc28p substrate |
|
YGL096W | 0.61 |
TOS8
|
Homeodomain-containing transcription factor; SBF regulated target gene that in turn regulates expression of genes involved in G1/S phase events such as bud site selection, bud emergence and cell cycle progression; similarity to Cup9p |
|
YDR380W | 0.60 |
ARO10
|
Phenylpyruvate decarboxylase, catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde, which is the first specific step in the Ehrlich pathway |
|
YJL116C | 0.59 |
NCA3
|
Protein that functions with Nca2p to regulate mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p ) of the Fo-F1 ATP synthase; member of the SUN family |
|
YGL165C | 0.58 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CUP2/YGL166W |
||
YDL246C | 0.57 |
SOR2
|
Protein of unknown function, computational analysis of large-scale protein-protein interaction data suggests a possible role in fructose or mannose metabolism |
|
YHL024W | 0.57 |
RIM4
|
Putative RNA-binding protein required for the expression of early and middle sporulation genes |
|
YHR176W | 0.56 |
FMO1
|
Flavin-containing monooxygenase, localized to the cytoplasmic face of the ER membrane; catalyzes oxidation of biological thiols to maintain the ER redox buffer ratio for correct folding of disulfide-bonded proteins |
|
YMR017W | 0.56 |
SPO20
|
Meiosis-specific subunit of the t-SNARE complex, required for prospore membrane formation during sporulation; similar to but not functionally redundant with Sec9p; SNAP-25 homolog |
|
YMR275C | 0.55 |
BUL1
|
Ubiquitin-binding component of the Rsp5p E3-ubiquitin ligase complex, functional homolog of Bul2p, disruption causes temperature-sensitive growth, overexpression causes missorting of amino acid permeases |
|
YOL081W | 0.55 |
IRA2
|
GTPase-activating protein that negatively regulates RAS by converting it from the GTP- to the GDP-bound inactive form, required for reducing cAMP levels under nutrient limiting conditions, has similarity to Ira1p and human neurofibromin |
|
YOL154W | 0.55 |
ZPS1
|
Putative GPI-anchored protein; transcription is induced under low-zinc conditions, as mediated by the Zap1p transcription factor, and at alkaline pH |
|
YCL057W | 0.55 |
PRD1
|
Zinc metalloendopeptidase, found in the cytoplasm and intermembrane space of mitochondria; with Cym1p, involved in degradation of mitochondrial proteins and of presequence peptides cleaved from imported proteins |
|
YOR064C | 0.55 |
YNG1
|
Subunit of the NuA3 histone acetyltransferase complex that acetylates histone H3; contains PHD finger domain that interacts with methylated histone H3, has similarity to the human tumor suppressor ING1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
5.2 | 15.6 | GO:0033499 | galactose catabolic process via UDP-galactose(GO:0033499) |
2.3 | 4.6 | GO:0042843 | D-xylose catabolic process(GO:0042843) |
2.2 | 22.3 | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122) |
1.9 | 5.8 | GO:0019388 | galactose catabolic process(GO:0019388) |
1.6 | 6.5 | GO:0015804 | neutral amino acid transport(GO:0015804) |
1.0 | 3.1 | GO:0006740 | NADPH regeneration(GO:0006740) |
1.0 | 9.1 | GO:0006097 | glyoxylate cycle(GO:0006097) |
1.0 | 4.0 | GO:0009300 | antisense RNA transcription(GO:0009300) regulation of antisense RNA transcription(GO:0060194) negative regulation of antisense RNA transcription(GO:0060195) |
1.0 | 3.0 | GO:1900460 | negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter(GO:1900460) |
1.0 | 4.0 | GO:0006848 | pyruvate transport(GO:0006848) |
0.9 | 2.8 | GO:0015740 | C4-dicarboxylate transport(GO:0015740) |
0.9 | 2.8 | GO:0042744 | hydrogen peroxide catabolic process(GO:0042744) |
0.8 | 3.9 | GO:0006012 | galactose metabolic process(GO:0006012) |
0.7 | 2.2 | GO:0097201 | negative regulation of transcription from RNA polymerase II promoter in response to stress(GO:0097201) |
0.7 | 2.1 | GO:0051594 | detection of chemical stimulus(GO:0009593) detection of carbohydrate stimulus(GO:0009730) detection of hexose stimulus(GO:0009732) detection of monosaccharide stimulus(GO:0034287) detection of glucose(GO:0051594) detection of stimulus(GO:0051606) |
0.7 | 2.0 | GO:0048015 | phosphatidylinositol-mediated signaling(GO:0048015) |
0.7 | 2.0 | GO:0050685 | regulation of RNA splicing(GO:0043484) regulation of mRNA splicing, via spliceosome(GO:0048024) positive regulation of mRNA processing(GO:0050685) |
0.7 | 2.7 | GO:0046341 | CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341) |
0.7 | 2.7 | GO:0015886 | heme transport(GO:0015886) |
0.7 | 14.1 | GO:0015749 | hexose transport(GO:0008645) monosaccharide transport(GO:0015749) |
0.6 | 1.9 | GO:0071281 | response to iron ion(GO:0010039) regulation of transcription from RNA polymerase II promoter in response to iron(GO:0034395) cellular response to iron ion(GO:0071281) |
0.6 | 3.0 | GO:0006121 | mitochondrial electron transport, succinate to ubiquinone(GO:0006121) |
0.5 | 1.6 | GO:0006538 | glutamate catabolic process(GO:0006538) |
0.5 | 1.1 | GO:0034310 | ethanol catabolic process(GO:0006068) primary alcohol catabolic process(GO:0034310) |
0.5 | 1.6 | GO:0008216 | spermidine metabolic process(GO:0008216) |
0.5 | 2.5 | GO:0061416 | regulation of transcription from RNA polymerase II promoter in response to salt stress(GO:0061416) |
0.5 | 1.4 | GO:0072488 | ammonium transmembrane transport(GO:0072488) |
0.4 | 6.0 | GO:0072593 | reactive oxygen species metabolic process(GO:0072593) |
0.4 | 2.1 | GO:0044070 | regulation of anion transport(GO:0044070) |
0.4 | 2.4 | GO:0060963 | positive regulation of ribosomal protein gene transcription from RNA polymerase II promoter(GO:0060963) |
0.4 | 1.6 | GO:0016577 | protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) demethylation(GO:0070988) |
0.4 | 3.5 | GO:0006616 | SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616) |
0.4 | 1.8 | GO:0070874 | negative regulation of glycogen biosynthetic process(GO:0045719) negative regulation of glycogen metabolic process(GO:0070874) |
0.3 | 4.2 | GO:0033617 | mitochondrial respiratory chain complex IV assembly(GO:0033617) |
0.3 | 1.3 | GO:0000949 | aromatic amino acid family catabolic process to alcohol via Ehrlich pathway(GO:0000949) |
0.3 | 0.9 | GO:2000058 | regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058) |
0.3 | 0.9 | GO:0006824 | cobalt ion transport(GO:0006824) |
0.3 | 1.1 | GO:0060211 | regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) |
0.3 | 1.1 | GO:0006083 | acetate metabolic process(GO:0006083) |
0.3 | 1.6 | GO:0000128 | flocculation(GO:0000128) flocculation via cell wall protein-carbohydrate interaction(GO:0000501) |
0.3 | 1.3 | GO:0034487 | amino acid transmembrane export from vacuole(GO:0032974) vacuolar transmembrane transport(GO:0034486) vacuolar amino acid transmembrane transport(GO:0034487) amino acid transmembrane export(GO:0044746) |
0.3 | 0.8 | GO:0015888 | thiamine transport(GO:0015888) |
0.2 | 1.3 | GO:0000255 | allantoin metabolic process(GO:0000255) allantoin catabolic process(GO:0000256) |
0.2 | 1.1 | GO:0015793 | glycerol transport(GO:0015793) |
0.2 | 1.7 | GO:0015891 | siderophore transport(GO:0015891) |
0.2 | 1.1 | GO:0090294 | nitrogen catabolite activation of transcription from RNA polymerase II promoter(GO:0001080) nitrogen catabolite activation of transcription(GO:0090294) |
0.2 | 0.6 | GO:0030802 | regulation of cyclic nucleotide metabolic process(GO:0030799) regulation of cyclic nucleotide biosynthetic process(GO:0030802) regulation of nucleotide biosynthetic process(GO:0030808) regulation of cAMP metabolic process(GO:0030814) regulation of cAMP biosynthetic process(GO:0030817) regulation of purine nucleotide biosynthetic process(GO:1900371) |
0.2 | 8.5 | GO:0009060 | aerobic respiration(GO:0009060) |
0.2 | 1.4 | GO:0018345 | protein palmitoylation(GO:0018345) |
0.2 | 2.7 | GO:0006754 | ATP biosynthetic process(GO:0006754) |
0.2 | 1.5 | GO:0070987 | error-free translesion synthesis(GO:0070987) |
0.2 | 0.6 | GO:0006768 | biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102) |
0.2 | 4.3 | GO:0006094 | gluconeogenesis(GO:0006094) |
0.2 | 1.0 | GO:0016239 | positive regulation of macroautophagy(GO:0016239) |
0.2 | 0.6 | GO:0032108 | negative regulation of macroautophagy(GO:0016242) negative regulation of response to external stimulus(GO:0032102) negative regulation of response to extracellular stimulus(GO:0032105) negative regulation of response to nutrient levels(GO:0032108) |
0.2 | 0.5 | GO:0009107 | lipoate metabolic process(GO:0009106) lipoate biosynthetic process(GO:0009107) |
0.1 | 0.7 | GO:0046461 | triglyceride catabolic process(GO:0019433) neutral lipid catabolic process(GO:0046461) acylglycerol catabolic process(GO:0046464) |
0.1 | 1.8 | GO:0005978 | glycogen biosynthetic process(GO:0005978) |
0.1 | 0.4 | GO:0006546 | glycine catabolic process(GO:0006546) |
0.1 | 0.9 | GO:0000266 | mitochondrial fission(GO:0000266) |
0.1 | 1.0 | GO:0045332 | phospholipid translocation(GO:0045332) |
0.1 | 0.7 | GO:0050667 | homocysteine metabolic process(GO:0050667) |
0.1 | 1.7 | GO:0051666 | actin cortical patch localization(GO:0051666) |
0.1 | 0.7 | GO:0051292 | pore complex assembly(GO:0046931) nuclear pore complex assembly(GO:0051292) |
0.1 | 0.5 | GO:0032077 | positive regulation of deoxyribonuclease activity(GO:0032077) positive regulation of endodeoxyribonuclease activity(GO:0032079) |
0.1 | 1.4 | GO:0040001 | establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle orientation(GO:0051294) |
0.1 | 2.1 | GO:0031163 | iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163) |
0.1 | 0.9 | GO:0005987 | sucrose metabolic process(GO:0005985) sucrose catabolic process(GO:0005987) |
0.1 | 2.2 | GO:0016579 | protein deubiquitination(GO:0016579) |
0.1 | 1.5 | GO:0006515 | misfolded or incompletely synthesized protein catabolic process(GO:0006515) |
0.1 | 0.6 | GO:0006279 | premeiotic DNA replication(GO:0006279) |
0.1 | 0.5 | GO:0001041 | transcription from RNA polymerase III type 2 promoter(GO:0001009) transcription from a RNA polymerase III hybrid type promoter(GO:0001041) |
0.1 | 0.8 | GO:0019878 | lysine biosynthetic process via aminoadipic acid(GO:0019878) |
0.1 | 1.6 | GO:0001101 | response to acid chemical(GO:0001101) |
0.1 | 3.2 | GO:0070726 | cell wall assembly(GO:0070726) |
0.1 | 0.5 | GO:0046686 | response to cadmium ion(GO:0046686) |
0.1 | 3.0 | GO:0051123 | RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123) |
0.1 | 1.7 | GO:0061726 | mitophagy(GO:0000422) mitochondrion disassembly(GO:0061726) |
0.1 | 0.5 | GO:0000436 | carbon catabolite activation of transcription from RNA polymerase II promoter(GO:0000436) |
0.1 | 0.5 | GO:0046685 | negative regulation of transcription by pheromones(GO:0045996) negative regulation of transcription from RNA polymerase II promoter by pheromones(GO:0046020) response to arsenic-containing substance(GO:0046685) |
0.1 | 0.1 | GO:0019627 | urea metabolic process(GO:0019627) |
0.1 | 1.0 | GO:0072329 | monocarboxylic acid catabolic process(GO:0072329) |
0.1 | 0.2 | GO:0015809 | arginine transport(GO:0015809) |
0.1 | 0.3 | GO:0008053 | mitochondrial fusion(GO:0008053) |
0.1 | 1.8 | GO:0006612 | protein targeting to membrane(GO:0006612) |
0.0 | 0.2 | GO:0032373 | positive regulation of lipid transport(GO:0032370) regulation of sterol transport(GO:0032371) positive regulation of sterol transport(GO:0032373) positive regulation of transmembrane transport(GO:0034764) regulation of sterol import by regulation of transcription from RNA polymerase II promoter(GO:0035968) positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter(GO:0035969) regulation of lipid transport by regulation of transcription from RNA polymerase II promoter(GO:0072367) regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter(GO:0072369) regulation of sterol import(GO:2000909) positive regulation of sterol import(GO:2000911) |
0.0 | 0.2 | GO:0000709 | meiotic joint molecule formation(GO:0000709) |
0.0 | 0.2 | GO:0031507 | heterochromatin assembly(GO:0031507) |
0.0 | 1.4 | GO:0022900 | electron transport chain(GO:0022900) |
0.0 | 0.2 | GO:0033683 | nucleotide-excision repair, DNA incision(GO:0033683) |
0.0 | 0.4 | GO:0030100 | regulation of endocytosis(GO:0030100) |
0.0 | 0.0 | GO:0045981 | positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) |
0.0 | 0.2 | GO:0000920 | cell separation after cytokinesis(GO:0000920) |
0.0 | 1.1 | GO:0000183 | chromatin silencing at rDNA(GO:0000183) |
0.0 | 0.5 | GO:0006409 | tRNA export from nucleus(GO:0006409) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431) |
0.0 | 0.8 | GO:0019318 | hexose metabolic process(GO:0019318) |
0.0 | 0.1 | GO:0051031 | tRNA transport(GO:0051031) |
0.0 | 0.7 | GO:0030150 | protein import into mitochondrial matrix(GO:0030150) |
0.0 | 0.8 | GO:0010324 | membrane invagination(GO:0010324) lysosomal microautophagy(GO:0016237) single-organism membrane invagination(GO:1902534) |
0.0 | 1.7 | GO:0071427 | mRNA export from nucleus(GO:0006406) mRNA-containing ribonucleoprotein complex export from nucleus(GO:0071427) |
0.0 | 0.1 | GO:0006545 | glycine biosynthetic process(GO:0006545) threonine catabolic process(GO:0006567) |
0.0 | 0.7 | GO:0007266 | Rho protein signal transduction(GO:0007266) |
0.0 | 0.5 | GO:0000209 | protein polyubiquitination(GO:0000209) |
0.0 | 0.2 | GO:0006078 | (1->6)-beta-D-glucan biosynthetic process(GO:0006078) |
0.0 | 0.4 | GO:0031321 | ascospore-type prospore assembly(GO:0031321) |
0.0 | 0.2 | GO:0031573 | intra-S DNA damage checkpoint(GO:0031573) |
0.0 | 0.2 | GO:0000722 | telomere maintenance via recombination(GO:0000722) |
0.0 | 0.2 | GO:0008615 | pyridoxine metabolic process(GO:0008614) pyridoxine biosynthetic process(GO:0008615) vitamin B6 metabolic process(GO:0042816) vitamin B6 biosynthetic process(GO:0042819) |
0.0 | 0.0 | GO:0043901 | negative regulation of conjugation(GO:0031135) negative regulation of conjugation with cellular fusion(GO:0031138) negative regulation of multi-organism process(GO:0043901) |
0.0 | 0.2 | GO:0031333 | negative regulation of protein complex assembly(GO:0031333) |
0.0 | 0.1 | GO:0060237 | regulation of fungal-type cell wall organization(GO:0060237) |
0.0 | 0.0 | GO:0071466 | cellular response to xenobiotic stimulus(GO:0071466) |
0.0 | 0.2 | GO:0006749 | glutathione metabolic process(GO:0006749) |
0.0 | 0.4 | GO:0030433 | ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) ERAD pathway(GO:0036503) |
0.0 | 0.1 | GO:0051181 | cofactor transport(GO:0051181) |
0.0 | 0.3 | GO:0006200 | obsolete ATP catabolic process(GO:0006200) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 12.6 | GO:0005750 | mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275) |
1.1 | 19.2 | GO:0070469 | respiratory chain(GO:0070469) |
0.9 | 10.9 | GO:0005782 | peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907) |
0.8 | 2.4 | GO:0005796 | Golgi lumen(GO:0005796) |
0.8 | 3.8 | GO:0032221 | Rpd3S complex(GO:0032221) |
0.7 | 2.1 | GO:0046930 | pore complex(GO:0046930) |
0.7 | 2.0 | GO:0071561 | nucleus-vacuole junction(GO:0071561) |
0.4 | 1.1 | GO:1990316 | ATG1/ULK1 kinase complex(GO:1990316) |
0.3 | 1.7 | GO:0000275 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275) proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261) |
0.3 | 1.4 | GO:0042406 | extrinsic component of endoplasmic reticulum membrane(GO:0042406) |
0.3 | 0.9 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
0.3 | 1.4 | GO:0005869 | dynactin complex(GO:0005869) |
0.2 | 1.7 | GO:0016459 | myosin complex(GO:0016459) |
0.2 | 1.4 | GO:0001405 | presequence translocase-associated import motor(GO:0001405) |
0.2 | 1.1 | GO:0032126 | eisosome(GO:0032126) |
0.2 | 4.2 | GO:0042645 | nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645) |
0.2 | 3.3 | GO:0070847 | core mediator complex(GO:0070847) |
0.2 | 1.3 | GO:0042597 | periplasmic space(GO:0042597) |
0.2 | 1.0 | GO:0032777 | Piccolo NuA4 histone acetyltransferase complex(GO:0032777) |
0.1 | 0.4 | GO:0005960 | glycine cleavage complex(GO:0005960) |
0.1 | 0.6 | GO:0031235 | intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235) |
0.1 | 0.5 | GO:0016602 | CCAAT-binding factor complex(GO:0016602) |
0.1 | 2.0 | GO:0005685 | U1 snRNP(GO:0005685) |
0.1 | 0.5 | GO:0070775 | NuA3 histone acetyltransferase complex(GO:0033100) H3 histone acetyltransferase complex(GO:0070775) |
0.1 | 0.4 | GO:0000445 | THO complex(GO:0000347) THO complex part of transcription export complex(GO:0000445) nucleoplasmic THO complex(GO:0000446) |
0.1 | 0.1 | GO:0030062 | mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062) |
0.1 | 1.0 | GO:0033698 | Rpd3L complex(GO:0033698) |
0.1 | 0.8 | GO:0000328 | fungal-type vacuole lumen(GO:0000328) |
0.1 | 0.5 | GO:0000127 | transcription factor TFIIIC complex(GO:0000127) |
0.1 | 1.3 | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex(GO:0000307) |
0.1 | 2.0 | GO:0098800 | inner mitochondrial membrane protein complex(GO:0098800) |
0.1 | 0.7 | GO:0098827 | endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827) |
0.1 | 0.3 | GO:0000813 | ESCRT I complex(GO:0000813) |
0.1 | 0.8 | GO:0005665 | DNA-directed RNA polymerase II, core complex(GO:0005665) |
0.1 | 0.2 | GO:0030122 | AP-2 adaptor complex(GO:0030122) clathrin coat of endocytic vesicle(GO:0030128) endocytic vesicle(GO:0030139) endocytic vesicle membrane(GO:0030666) clathrin-coated endocytic vesicle membrane(GO:0030669) clathrin-coated endocytic vesicle(GO:0045334) |
0.1 | 2.5 | GO:0005758 | mitochondrial intermembrane space(GO:0005758) |
0.0 | 1.5 | GO:0005763 | organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763) |
0.0 | 0.2 | GO:0032545 | CURI complex(GO:0032545) |
0.0 | 0.3 | GO:0000164 | protein phosphatase type 1 complex(GO:0000164) |
0.0 | 5.3 | GO:0000324 | storage vacuole(GO:0000322) lytic vacuole(GO:0000323) fungal-type vacuole(GO:0000324) |
0.0 | 13.6 | GO:0005886 | plasma membrane(GO:0005886) |
0.0 | 0.2 | GO:0000112 | nucleotide-excision repair factor 3 complex(GO:0000112) |
0.0 | 6.2 | GO:0031966 | mitochondrial membrane(GO:0031966) |
0.0 | 0.6 | GO:0000407 | pre-autophagosomal structure(GO:0000407) |
0.0 | 0.1 | GO:0072379 | ER membrane insertion complex(GO:0072379) TRC complex(GO:0072380) |
0.0 | 1.3 | GO:0005657 | replication fork(GO:0005657) |
0.0 | 0.2 | GO:0016272 | prefoldin complex(GO:0016272) |
0.0 | 1.3 | GO:0000779 | condensed chromosome, centromeric region(GO:0000779) |
0.0 | 0.9 | GO:0005774 | vacuolar membrane(GO:0005774) |
0.0 | 0.6 | GO:0030479 | actin cortical patch(GO:0030479) endocytic patch(GO:0061645) |
0.0 | 0.2 | GO:0000812 | Swr1 complex(GO:0000812) |
0.0 | 0.2 | GO:0005686 | U2 snRNP(GO:0005686) |
0.0 | 0.1 | GO:0005619 | ascospore wall(GO:0005619) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 6.4 | GO:0015146 | pentose transmembrane transporter activity(GO:0015146) |
1.5 | 4.4 | GO:0016208 | AMP binding(GO:0016208) |
1.5 | 5.8 | GO:0004614 | phosphoglucomutase activity(GO:0004614) |
1.4 | 4.3 | GO:0070569 | uridylyltransferase activity(GO:0070569) |
1.3 | 10.3 | GO:0016679 | ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors(GO:0016679) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681) |
1.1 | 4.6 | GO:0004032 | alditol:NADP+ 1-oxidoreductase activity(GO:0004032) |
1.0 | 4.1 | GO:0015193 | L-proline transmembrane transporter activity(GO:0015193) |
1.0 | 5.0 | GO:0015295 | solute:proton symporter activity(GO:0015295) |
1.0 | 16.6 | GO:0046906 | heme binding(GO:0020037) tetrapyrrole binding(GO:0046906) |
1.0 | 2.9 | GO:0004450 | isocitrate dehydrogenase (NADP+) activity(GO:0004450) |
1.0 | 3.8 | GO:0016854 | racemase and epimerase activity(GO:0016854) |
0.8 | 3.3 | GO:0001097 | TFIIH-class transcription factor binding(GO:0001097) |
0.7 | 2.1 | GO:0005536 | glucose binding(GO:0005536) |
0.7 | 2.8 | GO:0015556 | C4-dicarboxylate transmembrane transporter activity(GO:0015556) |
0.7 | 2.1 | GO:0015288 | anion channel activity(GO:0005253) voltage-gated anion channel activity(GO:0008308) porin activity(GO:0015288) wide pore channel activity(GO:0022829) |
0.7 | 2.7 | GO:0005347 | ATP transmembrane transporter activity(GO:0005347) ATP:ADP antiporter activity(GO:0005471) ADP transmembrane transporter activity(GO:0015217) |
0.7 | 3.3 | GO:0050308 | sugar-phosphatase activity(GO:0050308) |
0.6 | 7.1 | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912) |
0.6 | 3.0 | GO:0008177 | succinate dehydrogenase (ubiquinone) activity(GO:0008177) |
0.6 | 2.4 | GO:0004362 | glutathione-disulfide reductase activity(GO:0004362) |
0.5 | 1.6 | GO:0051864 | histone demethylase activity (H3-K36 specific)(GO:0051864) |
0.5 | 1.9 | GO:0015343 | siderophore transmembrane transporter activity(GO:0015343) iron chelate transmembrane transporter activity(GO:0015603) siderophore transporter activity(GO:0042927) |
0.5 | 4.6 | GO:0005353 | fructose transmembrane transporter activity(GO:0005353) mannose transmembrane transporter activity(GO:0015578) |
0.4 | 2.7 | GO:0016721 | superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721) |
0.4 | 1.3 | GO:0015188 | L-tyrosine transmembrane transporter activity(GO:0005302) L-glutamine transmembrane transporter activity(GO:0015186) L-isoleucine transmembrane transporter activity(GO:0015188) branched-chain amino acid transmembrane transporter activity(GO:0015658) |
0.4 | 4.2 | GO:0004129 | cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676) |
0.4 | 2.0 | GO:0052742 | phosphatidylinositol kinase activity(GO:0052742) |
0.4 | 1.6 | GO:0005537 | mannose binding(GO:0005537) |
0.4 | 7.8 | GO:0016831 | carboxy-lyase activity(GO:0016831) |
0.4 | 1.1 | GO:0016289 | CoA hydrolase activity(GO:0016289) |
0.3 | 3.8 | GO:0019200 | carbohydrate kinase activity(GO:0019200) |
0.3 | 1.7 | GO:0008198 | ferrous iron binding(GO:0008198) |
0.3 | 1.7 | GO:0000146 | microfilament motor activity(GO:0000146) |
0.3 | 2.0 | GO:0004029 | aldehyde dehydrogenase (NAD) activity(GO:0004029) aldehyde dehydrogenase [NAD(P)+] activity(GO:0004030) |
0.3 | 1.3 | GO:0001091 | RNA polymerase II basal transcription factor binding(GO:0001091) |
0.3 | 0.9 | GO:0050839 | cell adhesion molecule binding(GO:0050839) |
0.3 | 0.9 | GO:0004575 | beta-fructofuranosidase activity(GO:0004564) sucrose alpha-glucosidase activity(GO:0004575) |
0.3 | 4.9 | GO:0001010 | transcription factor activity, sequence-specific DNA binding transcription factor recruiting(GO:0001010) |
0.2 | 2.2 | GO:0000293 | ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723) |
0.2 | 2.7 | GO:0016413 | O-acetyltransferase activity(GO:0016413) |
0.2 | 1.1 | GO:0016888 | endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888) |
0.2 | 4.1 | GO:0051539 | 4 iron, 4 sulfur cluster binding(GO:0051539) |
0.2 | 2.2 | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism(GO:0046933) |
0.2 | 2.3 | GO:0001135 | transcription factor activity, RNA polymerase II transcription factor recruiting(GO:0001135) |
0.2 | 1.9 | GO:0004177 | aminopeptidase activity(GO:0004177) |
0.1 | 0.7 | GO:0004806 | triglyceride lipase activity(GO:0004806) retinyl-palmitate esterase activity(GO:0050253) |
0.1 | 1.8 | GO:0035251 | UDP-glucosyltransferase activity(GO:0035251) |
0.1 | 0.6 | GO:0034450 | ubiquitin-ubiquitin ligase activity(GO:0034450) |
0.1 | 1.0 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.1 | 1.6 | GO:0050661 | NADP binding(GO:0050661) |
0.1 | 0.7 | GO:0004197 | cysteine-type endopeptidase activity(GO:0004197) |
0.1 | 0.8 | GO:0019238 | cyclohydrolase activity(GO:0019238) |
0.1 | 1.7 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.1 | 0.9 | GO:0017025 | TBP-class protein binding(GO:0017025) |
0.1 | 0.8 | GO:0005337 | nucleoside transmembrane transporter activity(GO:0005337) |
0.1 | 0.9 | GO:0022838 | substrate-specific channel activity(GO:0022838) |
0.1 | 0.4 | GO:0004375 | glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642) |
0.1 | 1.4 | GO:0001671 | ATPase activator activity(GO:0001671) |
0.1 | 1.0 | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor(GO:0016620) |
0.1 | 2.2 | GO:0004402 | histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733) |
0.1 | 3.2 | GO:0001076 | transcription factor activity, RNA polymerase II transcription factor binding(GO:0001076) |
0.1 | 0.8 | GO:0001055 | RNA polymerase II activity(GO:0001055) |
0.1 | 1.8 | GO:0019901 | protein kinase binding(GO:0019901) |
0.1 | 0.2 | GO:0016841 | ammonia-lyase activity(GO:0016841) |
0.1 | 0.6 | GO:0008237 | metallopeptidase activity(GO:0008237) |
0.1 | 0.2 | GO:0042910 | xenobiotic-transporting ATPase activity(GO:0008559) xenobiotic transporter activity(GO:0042910) |
0.1 | 0.8 | GO:0003887 | DNA-directed DNA polymerase activity(GO:0003887) |
0.1 | 0.5 | GO:0015662 | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism(GO:0015662) |
0.1 | 0.8 | GO:0001085 | RNA polymerase II transcription factor binding(GO:0001085) |
0.1 | 0.1 | GO:0004448 | isocitrate dehydrogenase activity(GO:0004448) |
0.0 | 0.2 | GO:0008195 | phosphatidate phosphatase activity(GO:0008195) |
0.0 | 0.9 | GO:0031491 | nucleosome binding(GO:0031491) |
0.0 | 0.3 | GO:0008379 | thioredoxin peroxidase activity(GO:0008379) |
0.0 | 0.1 | GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813) |
0.0 | 2.9 | GO:0051082 | unfolded protein binding(GO:0051082) |
0.0 | 0.3 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) aspartic-type peptidase activity(GO:0070001) |
0.0 | 0.2 | GO:0000014 | single-stranded DNA endodeoxyribonuclease activity(GO:0000014) |
0.0 | 0.9 | GO:0016881 | acid-amino acid ligase activity(GO:0016881) |
0.0 | 0.2 | GO:0015294 | solute:cation symporter activity(GO:0015294) |
0.0 | 0.2 | GO:0004364 | glutathione transferase activity(GO:0004364) |
0.0 | 0.2 | GO:0018456 | aryl-alcohol dehydrogenase (NAD+) activity(GO:0018456) |
0.0 | 0.1 | GO:0016832 | aldehyde-lyase activity(GO:0016832) |
0.0 | 0.2 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.0 | 0.6 | GO:0032266 | phosphatidylinositol-3-phosphate binding(GO:0032266) |
0.0 | 0.6 | GO:0005484 | SNAP receptor activity(GO:0005484) |
0.0 | 0.2 | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861) |
0.0 | 0.1 | GO:0003993 | acid phosphatase activity(GO:0003993) |
0.0 | 0.3 | GO:0016298 | lipase activity(GO:0016298) |
0.0 | 1.9 | GO:0004674 | protein serine/threonine kinase activity(GO:0004674) |
0.0 | 0.2 | GO:0003713 | transcription coactivator activity(GO:0003713) |
0.0 | 0.1 | GO:1901505 | carbohydrate derivative transporter activity(GO:1901505) |
0.0 | 0.3 | GO:0004843 | thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459) ubiquitinyl hydrolase activity(GO:0101005) |
0.0 | 0.4 | GO:0043130 | ubiquitin binding(GO:0043130) |
0.0 | 0.1 | GO:0010181 | FMN binding(GO:0010181) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 3.4 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.5 | 1.5 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.4 | 1.2 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 66.6 | PID RAS PATHWAY | Regulation of Ras family activation |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.4 | 7.1 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
1.1 | 12.5 | REACTOME GLUCOSE METABOLISM | Genes involved in Glucose metabolism |
0.3 | 2.4 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.1 | 1.5 | REACTOME DNA REPAIR | Genes involved in DNA Repair |
0.1 | 0.1 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |
0.0 | 66.6 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |
0.0 | 0.2 | REACTOME MEIOTIC RECOMBINATION | Genes involved in Meiotic Recombination |