GSE80451: E.coli grown aerobically and anaerobically
Gene Symbol | Gene ID | Gene Info |
---|---|---|
gadX
|
gadX | GadX DNA-binding transcriptional dual regulator |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
hns | 8.81 |
hns
|
H-NS DNA-binding transcriptional dual regulator |
|
slp-dctR | 4.87 |
slp
dctR
|
starvation lipoprotein predicted DNA-binding transcriptional regulator |
|
uspE | 4.63 |
uspE
|
universal stress protein with a role cellular motility |
|
gadBC | 4.29 |
gadB
gadC
|
glutamate decarboxylase B subunit glutamic acid:4-aminobutyrate antiporter |
|
hdeD | 2.74 |
hdeD
|
acid-resistance membrane protein |
|
ybaST | 2.09 |
ybaS
ybaT
|
glutaminase putative transport protein, archaeal/bacterial transporter (ABT) family |
|
gadW | 1.79 |
gadW
|
GadW DNA-binding transcriptional dual regulator |
|
gadE | 1.49 |
gadE
|
GadE DNA-binding transcriptional activator |
|
cadBA | 0.46 |
cadA
cadB
|
lysine decarboxylase 1 lysine:cadaverine antiporter |
|
glnK-amtB | 0.46 |
glnK
amtB
|
nitrogen regulatory protein GlnK ammonia / ammonium transporter |
|
gadAX | 0.30 |
gadX
gadA
|
GadX DNA-binding transcriptional dual regulator glutamate decarboxylase A subunit |
|
lon | 0.26 |
lon
|
DNA-binding, ATP-dependent protease La |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 4.9 | GO:0043471 | regulation of cellular catabolic process(GO:0031329) regulation of cellular carbohydrate catabolic process(GO:0043471) |
1.1 | 4.6 | GO:0045852 | pH elevation(GO:0045852) intracellular pH elevation(GO:0051454) |
0.9 | 4.6 | GO:0070301 | cellular response to hydrogen peroxide(GO:0070301) |
0.3 | 5.2 | GO:0009268 | response to pH(GO:0009268) |
0.2 | 0.5 | GO:0006808 | regulation of nitrogen utilization(GO:0006808) |
0.1 | 0.3 | GO:0006515 | misfolded or incompletely synthesized protein catabolic process(GO:0006515) |
0.0 | 2.5 | GO:0006355 | regulation of transcription, DNA-templated(GO:0006355) regulation of nucleic acid-templated transcription(GO:1903506) regulation of RNA biosynthetic process(GO:2001141) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | GO:0019867 | outer membrane(GO:0019867) |
0.0 | 18.9 | GO:0016020 | membrane(GO:0016020) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 8.8 | GO:0003681 | bent DNA binding(GO:0003681) |
0.3 | 4.8 | GO:0015297 | antiporter activity(GO:0015297) |
0.1 | 0.5 | GO:0008519 | ammonium transmembrane transporter activity(GO:0008519) |
0.1 | 0.3 | GO:0004176 | ATP-dependent peptidase activity(GO:0004176) |
0.0 | 1.5 | GO:0003700 | transcription factor activity, sequence-specific DNA binding(GO:0003700) |
0.0 | 1.3 | GO:0003677 | DNA binding(GO:0003677) |
0.0 | 3.1 | GO:0042802 | identical protein binding(GO:0042802) |