avrg: GSE58827: Dynamics of the Mouse Liver


Results for AUGUGCC

Z-value: 0.23

Motif logo

miRNA associated with seed AUGUGCC

NamemiRBASE accession

Activity profile of AUGUGCC motif

Sorted Z-values of AUGUGCC motif

Promoter Log-likelihood Transcript Gene Gene Info
chr1_-_75046639 0.15 ENSMUST00000152855.1
nonhomologous end-joining factor 1
chr1_+_160906372 0.14 ENSMUST00000161609.1
RING CCCH (C3H) domains 1
chr10_-_45470201 0.13 ENSMUST00000079390.6
lin-28 homolog B (C. elegans)
chr14_-_61439831 0.12 ENSMUST00000022496.7
karyopherin (importin) alpha 3
chr17_-_74294834 0.12 ENSMUST00000078459.6
mediator of cell motility 1
chr4_+_13743424 0.10 ENSMUST00000006761.3
runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr11_+_79993062 0.10 ENSMUST00000017692.8
suppressor of zeste 12 homolog (Drosophila)
chr18_-_77565050 0.09 ENSMUST00000182153.1
ring finger protein 165
chr5_+_124540695 0.09 ENSMUST00000060226.4
transmembrane emp24 domain trafficking protein 2
chr11_-_95842409 0.09 ENSMUST00000059026.3
ABI gene family, member 3
chr18_+_6765171 0.09 ENSMUST00000097680.5
RAB18, member RAS oncogene family
chr15_+_80711292 0.09 ENSMUST00000067689.7
trinucleotide repeat containing 6b
chr19_+_21272276 0.08 ENSMUST00000025659.4
zinc finger, AN1-type domain 5
chr14_-_121379206 0.07 ENSMUST00000079817.7
serine/threonine kinase 24
chr13_+_106947104 0.07 ENSMUST00000022203.8
DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
chr9_-_103364970 0.07 ENSMUST00000116517.2
carnitine deficiency-associated gene expressed in ventricle 3
chr5_+_65537209 0.07 ENSMUST00000142407.1
ubiquitin-conjugating enzyme E2K
chr3_+_103279293 0.06 ENSMUST00000029444.6
tripartite motif-containing 33
chr11_-_117969176 0.06 ENSMUST00000054002.3
suppressor of cytokine signaling 3
chr5_+_108065742 0.06 ENSMUST00000081567.4
metal response element binding transcription factor 2
chr7_-_34654342 0.06 ENSMUST00000108069.1
potassium channel tetramerisation domain containing 15
chr13_-_81710937 0.05 ENSMUST00000161920.1
polymerase (RNA) III (DNA directed) polypeptide G
chr11_-_50238451 0.05 ENSMUST00000101265.2
leukotriene C4 synthase
chrX_+_18162575 0.05 ENSMUST00000044484.6
lysine (K)-specific demethylase 6A
chr13_-_100833369 0.05 ENSMUST00000067246.4
solute carrier family 30 (zinc transporter), member 5
chr15_+_79670856 0.05 ENSMUST00000023062.3
translocase of outer mitochondrial membrane 22 homolog (yeast)
chr7_+_110018301 0.05 ENSMUST00000084731.3
importin 7
chr10_+_34483400 0.05 ENSMUST00000019913.7
fyn-related kinase
chr13_+_93308006 0.05 ENSMUST00000079086.6
homer homolog 1 (Drosophila)
chr16_-_30388530 0.05 ENSMUST00000100013.2
ATPase type 13A3
chr16_+_49855618 0.05 ENSMUST00000084838.6
CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr18_+_67933257 0.04 ENSMUST00000063775.3
low density lipoprotein receptor class A domain containing 4
chr3_-_58525867 0.04 ENSMUST00000029385.7
stress-associated endoplasmic reticulum protein 1
chr8_+_76899772 0.04 ENSMUST00000109913.2
nuclear receptor subfamily 3, group C, member 2
chr8_+_46739745 0.04 ENSMUST00000034041.7
interferon regulatory factor 2
chr11_-_86807624 0.04 ENSMUST00000018569.7
DEAH (Asp-Glu-Ala-His) box polypeptide 40
chrX_+_13071500 0.04 ENSMUST00000089302.4
ubiquitin specific peptidase 9, X chromosome
chr9_+_72532214 0.04 ENSMUST00000163401.2
regulatory factor X, 7
chr2_-_57114970 0.04 ENSMUST00000028166.2
nuclear receptor subfamily 4, group A, member 2
chrX_+_13280970 0.04 ENSMUST00000000804.6
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
chr5_+_14514918 0.04 ENSMUST00000030691.10
piccolo (presynaptic cytomatrix protein)
chrX_+_66649318 0.04 ENSMUST00000166241.1
SLIT and NTRK-like family, member 2
chr5_-_145140238 0.04 ENSMUST00000031627.8
PDGFA associated protein 1
chr3_+_22076644 0.04 ENSMUST00000063988.8
transducin (beta)-like 1X-linked receptor 1
chr11_-_102185202 0.04 ENSMUST00000107156.2
LSM12 homolog (S. cerevisiae)
chr5_-_67427794 0.03 ENSMUST00000169190.1
BEN domain containing 4
chr5_+_122850186 0.03 ENSMUST00000031434.6
ring finger protein 34
chr5_+_67260565 0.03 ENSMUST00000037918.5
transmembrane protein 33
chr2_+_54436317 0.03 ENSMUST00000112636.1
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13
chr6_+_134920401 0.03 ENSMUST00000067327.4
cyclin-dependent kinase inhibitor 1B
chr9_-_70503718 0.03 ENSMUST00000034739.5
ring finger 111
chr17_-_35838259 0.03 ENSMUST00000001566.8
tubulin, beta 5 class I
chr13_-_51567084 0.03 ENSMUST00000021898.5
src homology 2 domain-containing transforming protein C3
chr2_-_69586021 0.03 ENSMUST00000100051.2
low density lipoprotein receptor-related protein 2
chr6_-_119417479 0.03 ENSMUST00000032272.6
adiponectin receptor 2
chr3_+_158036662 0.03 ENSMUST00000072080.3
leucine rich repeat containing 40
chr8_-_57653023 0.03 ENSMUST00000034021.5
UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
chr18_+_38418946 0.02 ENSMUST00000025293.3
Nedd4 family interacting protein 1
chr9_-_66593106 0.02 ENSMUST00000127569.1
ubiquitin specific peptidase 3
chr8_-_104443001 0.02 ENSMUST00000041769.6
dynein, cytoplasmic 1 light intermediate chain 2
chr11_+_75630974 0.02 ENSMUST00000006286.2
inositol polyphosphate 5-phosphatase K
chr14_+_111675113 0.02 ENSMUST00000042767.7
SLIT and NTRK-like family, member 5
chr3_-_9833653 0.02 ENSMUST00000161949.1
phosphoprotein associated with glycosphingolipid microdomains 1
chr4_+_15881255 0.02 ENSMUST00000029876.1
calbindin 1
chr9_+_57910974 0.02 ENSMUST00000163329.1
ubiquitin-like 7 (bone marrow stromal cell-derived)
chr19_+_53140430 0.02 ENSMUST00000111741.2
adducin 3 (gamma)
chr11_+_69991061 0.02 ENSMUST00000018711.8
gamma-aminobutyric acid receptor associated protein
chr19_+_23723279 0.02 ENSMUST00000067077.1
predicted gene 9938
chr11_-_94321957 0.02 ENSMUST00000166312.1
LUC7-like 3 (S. cerevisiae)
chr2_-_60125651 0.02 ENSMUST00000112550.1
bromodomain adjacent to zinc finger domain, 2B
chr5_+_129941949 0.01 ENSMUST00000051758.7
vitamin K epoxide reductase complex, subunit 1-like 1
chr18_+_34777008 0.01 ENSMUST00000043775.7
KDM3B lysine (K)-specific demethylase 3B
chr1_+_43445736 0.01 ENSMUST00000086421.5
non-catalytic region of tyrosine kinase adaptor protein 2
chr5_+_135187251 0.01 ENSMUST00000002825.5
bromodomain adjacent to zinc finger domain, 1B
chr7_+_35586232 0.01 ENSMUST00000040844.9
ankyrin repeat domain 27 (VPS9 domain)
chr11_-_82890541 0.01 ENSMUST00000092844.6
RAD51 homolog D
chr2_+_156613664 0.01 ENSMUST00000169464.2
discs, large homolog-associated protein 4 (Drosophila)
chr7_+_112023469 0.01 ENSMUST00000106653.2
ubiquitin specific peptidase 47
chr11_-_23895208 0.01 ENSMUST00000102863.2
poly(A) polymerase gamma
chr14_+_12284198 0.01 ENSMUST00000112669.3
RIKEN cDNA 3830406C13 gene
chr9_-_115310421 0.01 ENSMUST00000035010.8
STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
chr7_-_71351485 0.01 ENSMUST00000094315.2
predicted gene 10295
chr4_-_34882919 0.01 ENSMUST00000098163.2
zinc finger protein 292
chr2_-_64097994 0.01 ENSMUST00000131615.2
chr1_+_66468364 0.01 ENSMUST00000061620.9
unc-80 homolog (C. elegans)
chr2_-_63184253 0.01 ENSMUST00000075052.3
potassium voltage-gated channel, subfamily H (eag-related), member 7
chr17_-_64331817 0.01 ENSMUST00000172733.1
praja 2, RING-H2 motif containing
chr15_+_4375462 0.01 ENSMUST00000061925.4
phosphatidylinositol-specific phospholipase C, X domain containing 3
chr8_+_111536492 0.01 ENSMUST00000168428.1
zinc and ring finger 1
chr8_-_78436640 0.00 ENSMUST00000034115.3
POU domain, class 4, transcription factor 2
chr7_-_109083284 0.00 ENSMUST00000120876.1
resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
chr13_-_17805093 0.00 ENSMUST00000042365.7
cyclin-dependent kinase 13
chr11_-_71019233 0.00 ENSMUST00000108523.3
Der1-like domain family, member 2
chr11_-_96777492 0.00 ENSMUST00000127375.1
sorting nexin 11
chr4_+_97777606 0.00 ENSMUST00000075448.6
nuclear factor I/A
chr2_-_130840091 0.00 ENSMUST00000044766.8
RIKEN cDNA 4930402H24 gene

Network of associatons between targets according to the STRING database.

First level regulatory network of AUGUGCC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 GO:0031959 mineralocorticoid receptor signaling pathway(GO:0031959)
0.0 0.1 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.0 GO:0051866 general adaptation syndrome(GO:0051866)
0.0 0.0 GO:0098928 presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526)
0.0 0.1 GO:0061470 T follicular helper cell differentiation(GO:0061470)
0.0 0.1 GO:0061086 negative regulation of histone H3-K27 methylation(GO:0061086)
0.0 0.0 GO:0021698 cerebellar cortex structural organization(GO:0021698)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 0.0 GO:0044317 rod spherule(GO:0044317)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0008988 rRNA (adenine-N6-)-methyltransferase activity(GO:0008988)
0.0 0.0 GO:0017082 mineralocorticoid receptor activity(GO:0017082)
0.0 0.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.0 0.1 GO:0004464 leukotriene-C4 synthase activity(GO:0004464)