avrg: GSE58827: Dynamics of the Mouse Liver
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Mtf1
|
ENSMUSG00000028890.7 | metal response element binding transcription factor 1 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Mtf1 | mm10_v2_chr4_+_124802543_124802678 | 0.53 | 9.7e-04 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
6.1 | 42.4 | GO:0010273 | detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169) |
1.7 | 13.2 | GO:0006776 | vitamin A metabolic process(GO:0006776) |
1.3 | 9.2 | GO:0051410 | detoxification of nitrogen compound(GO:0051410) cellular detoxification of nitrogen compound(GO:0070458) |
1.1 | 3.3 | GO:0021577 | hindbrain structural organization(GO:0021577) cerebellum structural organization(GO:0021589) |
1.0 | 3.0 | GO:0030862 | positive regulation of polarized epithelial cell differentiation(GO:0030862) |
0.9 | 5.4 | GO:0042891 | antibiotic transport(GO:0042891) |
0.7 | 2.7 | GO:1990414 | replication-born double-strand break repair via sister chromatid exchange(GO:1990414) |
0.5 | 1.6 | GO:1900275 | negative regulation of phospholipase C activity(GO:1900275) activation of protein kinase C activity(GO:1990051) |
0.4 | 1.3 | GO:1901355 | response to rapamycin(GO:1901355) |
0.3 | 0.8 | GO:0051892 | negative regulation of cardioblast differentiation(GO:0051892) |
0.3 | 1.4 | GO:0035617 | stress granule disassembly(GO:0035617) |
0.3 | 0.8 | GO:0061090 | positive regulation of sequestering of zinc ion(GO:0061090) |
0.2 | 4.8 | GO:0032060 | bleb assembly(GO:0032060) |
0.2 | 1.1 | GO:0043985 | histone H4-R3 methylation(GO:0043985) |
0.2 | 4.0 | GO:0048715 | negative regulation of oligodendrocyte differentiation(GO:0048715) |
0.2 | 8.1 | GO:0008608 | attachment of spindle microtubules to kinetochore(GO:0008608) |
0.2 | 0.6 | GO:2000793 | cell proliferation involved in heart valve development(GO:2000793) |
0.2 | 1.1 | GO:1902732 | positive regulation of chondrocyte proliferation(GO:1902732) |
0.2 | 1.1 | GO:0030046 | parallel actin filament bundle assembly(GO:0030046) |
0.2 | 1.1 | GO:0015840 | urea transport(GO:0015840) |
0.1 | 1.4 | GO:0001672 | regulation of chromatin assembly or disassembly(GO:0001672) |
0.1 | 1.1 | GO:0007168 | receptor guanylyl cyclase signaling pathway(GO:0007168) |
0.1 | 1.5 | GO:0000076 | DNA replication checkpoint(GO:0000076) |
0.1 | 0.9 | GO:0060907 | positive regulation of macrophage cytokine production(GO:0060907) |
0.1 | 1.0 | GO:0034498 | early endosome to Golgi transport(GO:0034498) |
0.1 | 1.4 | GO:0046339 | diacylglycerol metabolic process(GO:0046339) |
0.1 | 0.3 | GO:0014012 | peripheral nervous system axon regeneration(GO:0014012) |
0.1 | 1.1 | GO:0046085 | adenosine metabolic process(GO:0046085) |
0.1 | 1.1 | GO:0016973 | poly(A)+ mRNA export from nucleus(GO:0016973) |
0.0 | 0.5 | GO:0070970 | interleukin-2 secretion(GO:0070970) |
0.0 | 3.6 | GO:1902017 | regulation of cilium assembly(GO:1902017) |
0.0 | 0.3 | GO:2000002 | regulation of mRNA export from nucleus(GO:0010793) negative regulation of DNA damage checkpoint(GO:2000002) |
0.0 | 1.0 | GO:0007130 | synaptonemal complex assembly(GO:0007130) |
0.0 | 3.9 | GO:0055013 | cardiac muscle cell development(GO:0055013) |
0.0 | 1.9 | GO:0015914 | phospholipid transport(GO:0015914) |
0.0 | 2.3 | GO:0070527 | platelet aggregation(GO:0070527) |
0.0 | 1.1 | GO:0007026 | negative regulation of microtubule depolymerization(GO:0007026) |
0.0 | 1.9 | GO:0042058 | regulation of epidermal growth factor receptor signaling pathway(GO:0042058) |
0.0 | 0.3 | GO:0048642 | negative regulation of skeletal muscle tissue development(GO:0048642) |
0.0 | 1.8 | GO:0098656 | anion transmembrane transport(GO:0098656) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 8.1 | GO:0031262 | Ndc80 complex(GO:0031262) |
0.5 | 9.2 | GO:0035686 | sperm fibrous sheath(GO:0035686) |
0.4 | 1.2 | GO:0031417 | NatC complex(GO:0031417) |
0.3 | 1.0 | GO:0030905 | retromer, tubulation complex(GO:0030905) |
0.2 | 3.6 | GO:0097539 | ciliary transition fiber(GO:0097539) |
0.2 | 1.5 | GO:0030896 | checkpoint clamp complex(GO:0030896) |
0.2 | 3.0 | GO:0036038 | MKS complex(GO:0036038) |
0.2 | 4.8 | GO:0043218 | compact myelin(GO:0043218) |
0.1 | 1.1 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.1 | 1.0 | GO:0000801 | central element(GO:0000801) |
0.1 | 2.7 | GO:0035861 | site of double-strand break(GO:0035861) |
0.1 | 1.4 | GO:0000346 | transcription export complex(GO:0000346) |
0.1 | 1.4 | GO:0035253 | ciliary rootlet(GO:0035253) |
0.0 | 1.1 | GO:0032426 | stereocilium tip(GO:0032426) |
0.0 | 5.4 | GO:0031526 | brush border membrane(GO:0031526) |
0.0 | 3.3 | GO:0005903 | brush border(GO:0005903) |
0.0 | 1.1 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.0 | 9.6 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.0 | 1.8 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
0.0 | 12.2 | GO:0005764 | lytic vacuole(GO:0000323) lysosome(GO:0005764) |
0.0 | 0.5 | GO:0042101 | T cell receptor complex(GO:0042101) |
0.0 | 1.6 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 5.4 | GO:0042895 | antibiotic transporter activity(GO:0042895) |
0.9 | 13.2 | GO:0019841 | retinal binding(GO:0016918) retinol binding(GO:0019841) |
0.4 | 2.7 | GO:0000150 | recombinase activity(GO:0000150) |
0.3 | 9.2 | GO:1900750 | glutathione binding(GO:0043295) oligopeptide binding(GO:1900750) |
0.3 | 1.5 | GO:0008853 | exodeoxyribonuclease III activity(GO:0008853) |
0.3 | 1.1 | GO:0035243 | protein-arginine omega-N symmetric methyltransferase activity(GO:0035243) |
0.3 | 1.1 | GO:0097108 | hedgehog family protein binding(GO:0097108) |
0.3 | 1.0 | GO:1990460 | leptin receptor binding(GO:1990460) |
0.2 | 15.5 | GO:0005507 | copper ion binding(GO:0005507) |
0.2 | 2.9 | GO:0004602 | glutathione peroxidase activity(GO:0004602) |
0.1 | 1.1 | GO:0005519 | cytoskeletal regulatory protein binding(GO:0005519) |
0.1 | 1.6 | GO:0070097 | delta-catenin binding(GO:0070097) |
0.1 | 1.8 | GO:0005225 | volume-sensitive anion channel activity(GO:0005225) |
0.1 | 1.4 | GO:0004143 | diacylglycerol kinase activity(GO:0004143) |
0.1 | 4.0 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
0.1 | 1.3 | GO:0035925 | mRNA 3'-UTR AU-rich region binding(GO:0035925) |
0.1 | 3.3 | GO:0042169 | SH2 domain binding(GO:0042169) |
0.1 | 1.9 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.1 | 1.1 | GO:0008253 | 5'-nucleotidase activity(GO:0008253) |
0.0 | 0.5 | GO:0050700 | CARD domain binding(GO:0050700) |
0.0 | 0.3 | GO:1990380 | Lys48-specific deubiquitinase activity(GO:1990380) |
0.0 | 0.6 | GO:0038191 | neuropilin binding(GO:0038191) |
0.0 | 3.6 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.0 | 4.4 | GO:0004519 | endonuclease activity(GO:0004519) |
0.0 | 1.4 | GO:0048487 | beta-tubulin binding(GO:0048487) |
0.0 | 19.7 | GO:0008270 | zinc ion binding(GO:0008270) |
0.0 | 0.2 | GO:0046935 | 1-phosphatidylinositol-3-kinase regulator activity(GO:0046935) |
0.0 | 0.6 | GO:0005104 | fibroblast growth factor receptor binding(GO:0005104) |
0.0 | 1.4 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.0 | 0.6 | GO:0043425 | bHLH transcription factor binding(GO:0043425) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 14.8 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.1 | 4.2 | PID ATR PATHWAY | ATR signaling pathway |
0.1 | 3.3 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.1 | 3.6 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 4.0 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.0 | 1.0 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.0 | 1.4 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 0.3 | PID SYNDECAN 2 PATHWAY | Syndecan-2-mediated signaling events |
0.0 | 1.1 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 0.9 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.0 | 0.6 | PID SHP2 PATHWAY | SHP2 signaling |
0.0 | 0.5 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 13.2 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.3 | 12.1 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.1 | 2.7 | REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS | Genes involved in Homologous recombination repair of replication-independent double-strand breaks |
0.1 | 8.1 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.1 | 1.1 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |
0.1 | 1.4 | REACTOME KINESINS | Genes involved in Kinesins |
0.0 | 1.5 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 1.5 | REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS | Genes involved in Activation of ATR in response to replication stress |
0.0 | 1.6 | REACTOME SIGNALING BY ROBO RECEPTOR | Genes involved in Signaling by Robo receptor |
0.0 | 0.9 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 1.4 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.0 | 4.0 | REACTOME P75 NTR RECEPTOR MEDIATED SIGNALLING | Genes involved in p75 NTR receptor-mediated signalling |
0.0 | 1.1 | REACTOME G BETA GAMMA SIGNALLING THROUGH PLC BETA | Genes involved in G beta:gamma signalling through PLC beta |
0.0 | 0.7 | REACTOME DOWNSTREAM TCR SIGNALING | Genes involved in Downstream TCR signaling |
0.0 | 1.3 | REACTOME DESTABILIZATION OF MRNA BY AUF1 HNRNP D0 | Genes involved in Destabilization of mRNA by AUF1 (hnRNP D0) |
0.0 | 0.6 | REACTOME FRS2 MEDIATED CASCADE | Genes involved in FRS2-mediated cascade |
0.0 | 0.3 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |