Project

avrg: GSE58827: Dynamics of the Mouse Liver

Navigation
Downloads

Results for Nfkb2

Z-value: 0.80

Motif logo

Transcription factors associated with Nfkb2

Gene Symbol Gene ID Gene Info
ENSMUSG00000025225.8 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Nfkb2mm10_v2_chr19_+_46304709_463048110.483.1e-03Click!

Activity profile of Nfkb2 motif

Sorted Z-values of Nfkb2 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of Nfkb2

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.6 GO:0002175 protein localization to paranode region of axon(GO:0002175)
0.3 3.0 GO:0033085 negative regulation of T cell differentiation in thymus(GO:0033085)
0.2 1.0 GO:1904529 regulation of actin filament binding(GO:1904529) regulation of actin binding(GO:1904616)
0.2 0.9 GO:0060697 glucosylceramide catabolic process(GO:0006680) positive regulation of phospholipid catabolic process(GO:0060697)
0.2 0.5 GO:0002874 regulation of chronic inflammatory response to antigenic stimulus(GO:0002874)
0.1 0.7 GO:0018343 protein farnesylation(GO:0018343)
0.1 0.5 GO:2001183 negative regulation of interleukin-12 secretion(GO:2001183)
0.1 0.7 GO:2000546 positive regulation of cell chemotaxis to fibroblast growth factor(GO:1904849) positive regulation of endothelial cell chemotaxis to fibroblast growth factor(GO:2000546)
0.1 1.1 GO:0051256 mitotic spindle midzone assembly(GO:0051256)
0.1 1.8 GO:0042487 regulation of odontogenesis of dentin-containing tooth(GO:0042487)
0.1 5.4 GO:1900026 positive regulation of substrate adhesion-dependent cell spreading(GO:1900026)
0.1 0.6 GO:1903265 positive regulation of tumor necrosis factor-mediated signaling pathway(GO:1903265)
0.1 0.2 GO:1990868 response to chemokine(GO:1990868) cellular response to chemokine(GO:1990869)
0.1 0.3 GO:0010936 negative regulation of macrophage cytokine production(GO:0010936)
0.1 0.4 GO:0070945 neutrophil mediated killing of gram-negative bacterium(GO:0070945)
0.0 1.7 GO:0010842 retina layer formation(GO:0010842)
0.0 2.1 GO:0030225 macrophage differentiation(GO:0030225)
0.0 0.5 GO:0098953 receptor diffusion trapping(GO:0098953) postsynaptic neurotransmitter receptor diffusion trapping(GO:0098970) neurotransmitter receptor diffusion trapping(GO:0099628)
0.0 0.4 GO:0061470 T follicular helper cell differentiation(GO:0061470)
0.0 0.2 GO:0016185 synaptic vesicle budding from presynaptic endocytic zone membrane(GO:0016185)
0.0 1.3 GO:0060325 face morphogenesis(GO:0060325)
0.0 0.1 GO:0033140 negative regulation of peptidyl-serine phosphorylation of STAT protein(GO:0033140)
0.0 0.1 GO:1901842 negative regulation of high voltage-gated calcium channel activity(GO:1901842)
0.0 0.6 GO:0060612 adipose tissue development(GO:0060612)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 5.3 GO:0042581 specific granule(GO:0042581)
0.1 0.6 GO:0097169 AIM2 inflammasome complex(GO:0097169)
0.1 1.2 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.1 1.1 GO:0005952 cAMP-dependent protein kinase complex(GO:0005952)
0.1 1.6 GO:0033270 paranode region of axon(GO:0033270)
0.0 0.2 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 0.4 GO:0042788 polysomal ribosome(GO:0042788)
0.0 0.5 GO:0044224 juxtaparanode region of axon(GO:0044224)
0.0 2.1 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 0.9 GO:0001917 photoreceptor inner segment(GO:0001917)
0.0 1.0 GO:0031941 filamentous actin(GO:0031941)
0.0 1.2 GO:0072686 mitotic spindle(GO:0072686)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 GO:0070976 TIR domain binding(GO:0070976)
0.1 0.7 GO:0005105 type 1 fibroblast growth factor receptor binding(GO:0005105)
0.1 1.2 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.1 3.0 GO:0051059 NF-kappaB binding(GO:0051059)
0.1 0.5 GO:0031812 G-protein coupled nucleotide receptor binding(GO:0031811) P2Y1 nucleotide receptor binding(GO:0031812)
0.0 1.1 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 1.1 GO:0019956 chemokine binding(GO:0019956)
0.0 0.6 GO:0050700 CARD domain binding(GO:0050700)
0.0 1.0 GO:0031005 filamin binding(GO:0031005)
0.0 1.9 GO:0005109 frizzled binding(GO:0005109)
0.0 4.4 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.6 GO:0051861 glycolipid binding(GO:0051861)
0.0 1.7 GO:0001205 transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205)
0.0 0.8 GO:0030676 Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.0 0.2 GO:0035925 mRNA 3'-UTR AU-rich region binding(GO:0035925)
0.0 0.2 GO:0031749 D2 dopamine receptor binding(GO:0031749)
0.0 0.7 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.5 GO:0005035 tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035)
0.0 5.3 GO:0045296 cadherin binding(GO:0045296)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 3.2 PID TCR RAS PATHWAY Ras signaling in the CD4+ TCR pathway
0.0 0.9 PID SYNDECAN 2 PATHWAY Syndecan-2-mediated signaling events
0.0 0.5 ST GA12 PATHWAY G alpha 12 Pathway
0.0 1.9 WNT SIGNALING Genes related to Wnt-mediated signal transduction

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.1 REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK Genes involved in Regulation of Rheb GTPase activity by AMPK
0.1 1.1 REACTOME CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase
0.0 1.0 REACTOME CRMPS IN SEMA3A SIGNALING Genes involved in CRMPs in Sema3A signaling
0.0 0.6 REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression
0.0 0.7 REACTOME SIGNALING BY FGFR3 MUTANTS Genes involved in Signaling by FGFR3 mutants
0.0 1.2 REACTOME GLYCOLYSIS Genes involved in Glycolysis
0.0 0.9 REACTOME EFFECTS OF PIP2 HYDROLYSIS Genes involved in Effects of PIP2 hydrolysis
0.0 0.6 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.0 1.8 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.0 1.2 REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS Genes involved in Class B/2 (Secretin family receptors)