avrg: GSE58827: Dynamics of the Mouse Liver
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Gmeb1
|
ENSMUSG00000028901.7 | glucocorticoid modulatory element binding protein 1 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Gmeb1 | mm10_v2_chr4_-_132261521_132261572 | 0.87 | 4.1e-12 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.3 | 13.0 | GO:0006592 | ornithine biosynthetic process(GO:0006592) |
2.7 | 10.9 | GO:0051316 | attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) |
1.4 | 9.8 | GO:0046601 | positive regulation of centriole replication(GO:0046601) de novo centriole assembly(GO:0098535) |
1.2 | 5.8 | GO:0097167 | circadian regulation of translation(GO:0097167) |
0.8 | 8.3 | GO:2000348 | regulation of CD40 signaling pathway(GO:2000348) |
0.6 | 4.4 | GO:0070294 | renal sodium ion absorption(GO:0070294) |
0.5 | 20.9 | GO:0006779 | porphyrin-containing compound biosynthetic process(GO:0006779) |
0.4 | 5.0 | GO:0016446 | somatic hypermutation of immunoglobulin genes(GO:0016446) |
0.3 | 1.8 | GO:0002317 | plasma cell differentiation(GO:0002317) |
0.3 | 2.8 | GO:0000972 | transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972) |
0.3 | 2.6 | GO:1904668 | positive regulation of ubiquitin protein ligase activity(GO:1904668) |
0.2 | 1.2 | GO:0072717 | cellular response to actinomycin D(GO:0072717) |
0.2 | 2.7 | GO:0031936 | negative regulation of chromatin silencing(GO:0031936) |
0.2 | 1.1 | GO:0051106 | regulation of DNA ligation(GO:0051105) positive regulation of DNA ligation(GO:0051106) |
0.1 | 0.4 | GO:0002314 | germinal center B cell differentiation(GO:0002314) |
0.1 | 2.3 | GO:0044458 | motile cilium assembly(GO:0044458) |
0.1 | 1.0 | GO:0006020 | inositol metabolic process(GO:0006020) |
0.1 | 0.7 | GO:0032261 | purine nucleotide salvage(GO:0032261) IMP salvage(GO:0032264) |
0.1 | 1.9 | GO:0000413 | protein peptidyl-prolyl isomerization(GO:0000413) |
0.1 | 1.7 | GO:0048026 | positive regulation of mRNA splicing, via spliceosome(GO:0048026) |
0.1 | 0.6 | GO:0007000 | nucleolus organization(GO:0007000) |
0.1 | 0.3 | GO:0090666 | scaRNA localization to Cajal body(GO:0090666) |
0.1 | 0.3 | GO:0051661 | maintenance of centrosome location(GO:0051661) |
0.0 | 2.5 | GO:0046329 | negative regulation of JNK cascade(GO:0046329) |
0.0 | 0.8 | GO:0060575 | intestinal epithelial cell differentiation(GO:0060575) |
0.0 | 0.3 | GO:0099590 | neurotransmitter receptor internalization(GO:0099590) |
0.0 | 0.4 | GO:0033148 | positive regulation of intracellular estrogen receptor signaling pathway(GO:0033148) |
0.0 | 0.6 | GO:0033141 | positive regulation of peptidyl-serine phosphorylation of STAT protein(GO:0033141) |
0.0 | 1.5 | GO:0000245 | spliceosomal complex assembly(GO:0000245) |
0.0 | 0.3 | GO:0035562 | negative regulation of chromatin binding(GO:0035562) |
0.0 | 1.7 | GO:0051028 | mRNA transport(GO:0051028) |
0.0 | 0.5 | GO:0007026 | negative regulation of microtubule depolymerization(GO:0007026) |
0.0 | 1.0 | GO:0031338 | regulation of vesicle fusion(GO:0031338) |
0.0 | 0.6 | GO:1901880 | negative regulation of protein depolymerization(GO:1901880) |
0.0 | 0.2 | GO:0042407 | cristae formation(GO:0042407) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.7 | 10.9 | GO:0000818 | nuclear MIS12/MIND complex(GO:0000818) condensed chromosome inner kinetochore(GO:0000939) |
1.6 | 9.8 | GO:0098536 | deuterosome(GO:0098536) |
0.9 | 20.9 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
0.3 | 2.8 | GO:0031080 | nuclear pore outer ring(GO:0031080) |
0.1 | 2.6 | GO:0005680 | anaphase-promoting complex(GO:0005680) |
0.1 | 2.3 | GO:0044292 | dendrite terminus(GO:0044292) |
0.1 | 1.3 | GO:0097539 | ciliary transition fiber(GO:0097539) |
0.1 | 1.5 | GO:0071004 | U2 snRNP(GO:0005686) U2-type prespliceosome(GO:0071004) |
0.1 | 1.7 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.0 | 1.7 | GO:0035145 | exon-exon junction complex(GO:0035145) |
0.0 | 0.3 | GO:0000235 | astral microtubule(GO:0000235) |
0.0 | 1.0 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
0.0 | 8.3 | GO:0000793 | condensed chromosome(GO:0000793) |
0.0 | 4.3 | GO:0016363 | nuclear matrix(GO:0016363) |
0.0 | 1.1 | GO:0035861 | site of double-strand break(GO:0035861) |
0.0 | 11.6 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.0 | 2.5 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.0 | 0.3 | GO:0005832 | chaperonin-containing T-complex(GO:0005832) |
0.0 | 1.2 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.0 | 0.6 | GO:0015030 | Cajal body(GO:0015030) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.3 | 13.0 | GO:0017084 | glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350) delta1-pyrroline-5-carboxylate synthetase activity(GO:0017084) amino acid kinase activity(GO:0019202) |
2.1 | 20.9 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
1.3 | 5.0 | GO:0008309 | double-stranded DNA exodeoxyribonuclease activity(GO:0008309) |
0.4 | 2.6 | GO:0010997 | anaphase-promoting complex binding(GO:0010997) |
0.3 | 1.7 | GO:0051033 | nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033) |
0.2 | 7.5 | GO:0070182 | DNA polymerase binding(GO:0070182) |
0.2 | 1.0 | GO:0052724 | inositol hexakisphosphate kinase activity(GO:0000828) inositol hexakisphosphate 5-kinase activity(GO:0000832) inositol hexakisphosphate 1-kinase activity(GO:0052723) inositol hexakisphosphate 3-kinase activity(GO:0052724) |
0.2 | 2.5 | GO:1990226 | histone methyltransferase binding(GO:1990226) |
0.2 | 1.0 | GO:0046920 | alpha-(1->3)-fucosyltransferase activity(GO:0046920) |
0.2 | 1.2 | GO:0070180 | large ribosomal subunit rRNA binding(GO:0070180) |
0.1 | 2.8 | GO:0017056 | structural constituent of nuclear pore(GO:0017056) |
0.1 | 2.3 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.1 | 0.7 | GO:0003876 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
0.1 | 1.1 | GO:0003906 | DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906) |
0.1 | 3.2 | GO:0070888 | E-box binding(GO:0070888) |
0.0 | 1.7 | GO:0046966 | thyroid hormone receptor binding(GO:0046966) |
0.0 | 1.0 | GO:0001618 | virus receptor activity(GO:0001618) |
0.0 | 1.9 | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity(GO:0003755) |
0.0 | 0.8 | GO:0070577 | lysine-acetylated histone binding(GO:0070577) |
0.0 | 0.6 | GO:0005132 | type I interferon receptor binding(GO:0005132) |
0.0 | 1.0 | GO:0071889 | 14-3-3 protein binding(GO:0071889) |
0.0 | 8.9 | GO:0004674 | protein serine/threonine kinase activity(GO:0004674) |
0.0 | 1.2 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.8 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.2 | 8.3 | PID BARD1 PATHWAY | BARD1 signaling events |
0.1 | 2.3 | PID AURORA A PATHWAY | Aurora A signaling |
0.0 | 1.1 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
0.0 | 1.2 | PID P53 REGULATION PATHWAY | p53 pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 8.3 | REACTOME REGULATION OF THE FANCONI ANEMIA PATHWAY | Genes involved in Regulation of the Fanconi anemia pathway |
0.5 | 13.0 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.5 | 20.9 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.2 | 2.3 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |
0.1 | 9.8 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |
0.1 | 5.8 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.1 | 11.2 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.0 | 2.2 | REACTOME MRNA 3 END PROCESSING | Genes involved in mRNA 3'-end processing |
0.0 | 0.7 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.0 | 3.3 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.0 | 0.9 | REACTOME PACKAGING OF TELOMERE ENDS | Genes involved in Packaging Of Telomere Ends |
0.0 | 1.0 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.0 | 0.3 | REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC | Genes involved in Formation of tubulin folding intermediates by CCT/TriC |
0.0 | 0.3 | REACTOME RETROGRADE NEUROTROPHIN SIGNALLING | Genes involved in Retrograde neurotrophin signalling |
0.0 | 1.2 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |