Project

avrg: GSE58827: Dynamics of the Mouse Liver

Navigation
Downloads

Results for Bsx

Z-value: 0.87

Motif logo

Transcription factors associated with Bsx

Gene Symbol Gene ID Gene Info
ENSMUSG00000054360.3 brain specific homeobox

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Bsxmm10_v2_chr9_+_40873981_408741270.231.8e-01Click!

Activity profile of Bsx motif

Sorted Z-values of Bsx motif

Network of associatons between targets according to the STRING database.

First level regulatory network of Bsx

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 3.7 GO:0002386 immune response in mucosal-associated lymphoid tissue(GO:0002386)
0.7 2.2 GO:2000097 regulation of smooth muscle cell-matrix adhesion(GO:2000097)
0.4 1.5 GO:0061743 motor learning(GO:0061743)
0.3 2.9 GO:0002826 negative regulation of T-helper 1 type immune response(GO:0002826)
0.2 0.5 GO:0019074 viral genome packaging(GO:0019072) viral RNA genome packaging(GO:0019074)
0.2 0.6 GO:1903896 positive regulation of IRE1-mediated unfolded protein response(GO:1903896)
0.2 0.8 GO:0002669 positive regulation of T cell anergy(GO:0002669) positive regulation of lymphocyte anergy(GO:0002913)
0.2 1.1 GO:1901678 iron coordination entity transport(GO:1901678)
0.1 0.4 GO:0046947 hydroxylysine metabolic process(GO:0046946) hydroxylysine biosynthetic process(GO:0046947)
0.1 0.6 GO:0060023 soft palate development(GO:0060023)
0.1 0.6 GO:0045654 positive regulation of megakaryocyte differentiation(GO:0045654)
0.1 2.1 GO:0060707 trophoblast giant cell differentiation(GO:0060707)
0.1 0.4 GO:0016557 peroxisome membrane biogenesis(GO:0016557)
0.1 1.8 GO:0016486 peptide hormone processing(GO:0016486)
0.0 0.0 GO:1904207 regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904207) positive regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904209)
0.0 0.5 GO:0046541 saliva secretion(GO:0046541)
0.0 0.2 GO:0021993 initiation of neural tube closure(GO:0021993)
0.0 0.7 GO:0051156 glucose 6-phosphate metabolic process(GO:0051156)
0.0 0.1 GO:0035589 G-protein coupled purinergic nucleotide receptor signaling pathway(GO:0035589)
0.0 0.1 GO:0006059 hexitol metabolic process(GO:0006059)
0.0 0.2 GO:0043353 enucleate erythrocyte differentiation(GO:0043353)
0.0 0.1 GO:0035633 cyclooxygenase pathway(GO:0019371) maintenance of blood-brain barrier(GO:0035633)
0.0 0.2 GO:0070317 negative regulation of G0 to G1 transition(GO:0070317)
0.0 0.1 GO:0043490 malate-aspartate shuttle(GO:0043490)
0.0 0.1 GO:0097155 fasciculation of sensory neuron axon(GO:0097155)
0.0 0.2 GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090266) regulation of mitotic spindle checkpoint(GO:1903504)
0.0 0.3 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.2 GO:0033572 transferrin transport(GO:0033572)
0.0 0.4 GO:0006907 pinocytosis(GO:0006907)
0.0 0.4 GO:0001829 trophectodermal cell differentiation(GO:0001829)
0.0 0.2 GO:0001778 plasma membrane repair(GO:0001778)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.2 GO:0042583 chromaffin granule(GO:0042583)
0.1 1.0 GO:0005927 muscle tendon junction(GO:0005927)
0.1 0.9 GO:0097197 tetraspanin-enriched microdomain(GO:0097197)
0.1 0.2 GO:0034657 GID complex(GO:0034657)
0.1 0.4 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.1 0.6 GO:0072687 meiotic spindle(GO:0072687)
0.0 0.1 GO:0008623 CHRAC(GO:0008623)
0.0 0.5 GO:0097038 perinuclear endoplasmic reticulum(GO:0097038)
0.0 0.1 GO:0097454 Schwann cell microvillus(GO:0097454)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 3.4 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.7 GO:0043034 costamere(GO:0043034)
0.0 0.4 GO:0005779 integral component of peroxisomal membrane(GO:0005779)
0.0 0.3 GO:0008074 guanylate cyclase complex, soluble(GO:0008074)
0.0 1.1 GO:0005811 lipid particle(GO:0005811)
0.0 0.8 GO:0000786 nucleosome(GO:0000786)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 2.9 GO:0002113 interleukin-33 binding(GO:0002113)
0.2 0.7 GO:0050309 glucose-6-phosphatase activity(GO:0004346) sugar-terminal-phosphatase activity(GO:0050309)
0.1 0.4 GO:0008475 procollagen-lysine 5-dioxygenase activity(GO:0008475)
0.1 0.6 GO:0050786 RAGE receptor binding(GO:0050786)
0.1 0.5 GO:0009374 biotin binding(GO:0009374)
0.1 0.6 GO:0002162 dystroglycan binding(GO:0002162)
0.1 1.0 GO:0017166 vinculin binding(GO:0017166)
0.0 0.5 GO:0015279 store-operated calcium channel activity(GO:0015279)
0.0 0.1 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 3.7 GO:0003823 antigen binding(GO:0003823)
0.0 0.9 GO:0070330 aromatase activity(GO:0070330)
0.0 3.2 GO:0002020 protease binding(GO:0002020)
0.0 0.8 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.0 1.6 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.1 GO:0015501 glutamate:sodium symporter activity(GO:0015501)
0.0 0.6 GO:0005201 extracellular matrix structural constituent(GO:0005201)
0.0 0.3 GO:0004383 guanylate cyclase activity(GO:0004383)
0.0 0.8 GO:0001784 phosphotyrosine binding(GO:0001784)
0.0 0.2 GO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 2.2 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.0 0.8 PID CD40 PATHWAY CD40/CD40L signaling
0.0 0.6 NABA COLLAGENS Genes encoding collagen proteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.2 REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
0.0 0.6 REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION Genes involved in Apoptosis induced DNA fragmentation
0.0 0.7 REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS Genes involved in Termination of O-glycan biosynthesis
0.0 0.8 REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers
0.0 0.8 REACTOME RNA POL I PROMOTER OPENING Genes involved in RNA Polymerase I Promoter Opening
0.0 0.4 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.0 1.0 REACTOME COLLAGEN FORMATION Genes involved in Collagen formation
0.0 0.7 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport