avrg: GSE58827: Dynamics of the Mouse Liver
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Mga
|
ENSMUSG00000033943.9 | MAX gene associated |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Mga | mm10_v2_chr2_+_119897212_119897305 | 0.57 | 2.5e-04 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.4 | 14.7 | GO:0019371 | cyclooxygenase pathway(GO:0019371) |
1.4 | 5.4 | GO:0002030 | inhibitory G-protein coupled receptor phosphorylation(GO:0002030) |
1.3 | 11.9 | GO:0070944 | neutrophil mediated killing of bacterium(GO:0070944) |
1.0 | 3.1 | GO:0006592 | ornithine biosynthetic process(GO:0006592) |
1.0 | 5.2 | GO:0051142 | regulation of NK T cell proliferation(GO:0051140) positive regulation of NK T cell proliferation(GO:0051142) |
0.7 | 2.9 | GO:1903896 | positive regulation of IRE1-mediated unfolded protein response(GO:1903896) |
0.7 | 2.0 | GO:1904306 | positive regulation of gastro-intestinal system smooth muscle contraction(GO:1904306) |
0.6 | 1.7 | GO:0003127 | detection of nodal flow(GO:0003127) detection of endogenous stimulus(GO:0009726) |
0.5 | 5.2 | GO:0002553 | histamine production involved in inflammatory response(GO:0002349) histamine secretion involved in inflammatory response(GO:0002441) histamine secretion by mast cell(GO:0002553) |
0.5 | 2.0 | GO:0002540 | leukotriene production involved in inflammatory response(GO:0002540) |
0.5 | 3.4 | GO:0033567 | DNA replication, Okazaki fragment processing(GO:0033567) |
0.4 | 4.2 | GO:0048170 | positive regulation of long-term neuronal synaptic plasticity(GO:0048170) |
0.3 | 3.2 | GO:2001214 | positive regulation of vasculogenesis(GO:2001214) |
0.3 | 1.5 | GO:0072531 | pyrimidine-containing compound transmembrane transport(GO:0072531) |
0.3 | 1.5 | GO:0080154 | regulation of fertilization(GO:0080154) |
0.2 | 2.8 | GO:0002315 | marginal zone B cell differentiation(GO:0002315) |
0.2 | 0.8 | GO:0032218 | riboflavin transport(GO:0032218) |
0.2 | 1.4 | GO:0060700 | regulation of ribonuclease activity(GO:0060700) |
0.1 | 1.3 | GO:0010793 | regulation of mRNA export from nucleus(GO:0010793) |
0.1 | 1.4 | GO:0098703 | parathyroid hormone secretion(GO:0035898) calcium ion import across plasma membrane(GO:0098703) calcium ion import into cell(GO:1990035) |
0.1 | 2.4 | GO:0043011 | myeloid dendritic cell differentiation(GO:0043011) |
0.1 | 1.1 | GO:0070236 | negative regulation of activation-induced cell death of T cells(GO:0070236) |
0.1 | 0.5 | GO:0000480 | endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000480) |
0.1 | 0.3 | GO:0060559 | positive regulation of vitamin metabolic process(GO:0046136) positive regulation of vitamin D biosynthetic process(GO:0060557) positive regulation of calcidiol 1-monooxygenase activity(GO:0060559) |
0.1 | 0.4 | GO:0075525 | viral translational termination-reinitiation(GO:0075525) |
0.1 | 0.6 | GO:0034393 | positive regulation of smooth muscle cell apoptotic process(GO:0034393) |
0.1 | 0.8 | GO:0060907 | positive regulation of macrophage cytokine production(GO:0060907) |
0.1 | 1.0 | GO:0034244 | negative regulation of transcription elongation from RNA polymerase II promoter(GO:0034244) |
0.1 | 4.6 | GO:0070303 | negative regulation of stress-activated MAPK cascade(GO:0032873) negative regulation of stress-activated protein kinase signaling cascade(GO:0070303) |
0.1 | 1.9 | GO:0050832 | defense response to fungus(GO:0050832) |
0.1 | 0.7 | GO:1901409 | positive regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901409) |
0.1 | 0.9 | GO:0046085 | adenosine metabolic process(GO:0046085) |
0.1 | 10.8 | GO:0010951 | negative regulation of endopeptidase activity(GO:0010951) |
0.0 | 1.7 | GO:0035025 | positive regulation of Rho protein signal transduction(GO:0035025) |
0.0 | 3.7 | GO:0038083 | peptidyl-tyrosine autophosphorylation(GO:0038083) |
0.0 | 0.5 | GO:0021942 | radial glia guided migration of Purkinje cell(GO:0021942) |
0.0 | 2.4 | GO:0048873 | homeostasis of number of cells within a tissue(GO:0048873) |
0.0 | 1.4 | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462) |
0.0 | 1.0 | GO:0010661 | positive regulation of muscle cell apoptotic process(GO:0010661) positive regulation of striated muscle cell apoptotic process(GO:0010663) positive regulation of cardiac muscle cell apoptotic process(GO:0010666) |
0.0 | 1.6 | GO:0034605 | cellular response to heat(GO:0034605) |
0.0 | 1.5 | GO:0031338 | regulation of vesicle fusion(GO:0031338) |
0.0 | 1.5 | GO:0007569 | cell aging(GO:0007569) |
0.0 | 0.7 | GO:0007026 | negative regulation of microtubule depolymerization(GO:0007026) |
0.0 | 0.5 | GO:0000027 | ribosomal large subunit assembly(GO:0000027) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 3.7 | GO:0031466 | Cul5-RING ubiquitin ligase complex(GO:0031466) |
0.4 | 6.8 | GO:0031235 | intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235) |
0.2 | 1.5 | GO:0002081 | outer acrosomal membrane(GO:0002081) |
0.2 | 3.0 | GO:0005652 | nuclear lamina(GO:0005652) |
0.2 | 11.9 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.1 | 4.2 | GO:0097440 | apical dendrite(GO:0097440) |
0.1 | 0.3 | GO:0008622 | epsilon DNA polymerase complex(GO:0008622) |
0.0 | 11.6 | GO:0008021 | synaptic vesicle(GO:0008021) |
0.0 | 0.7 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
0.0 | 1.4 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
0.0 | 0.4 | GO:0005852 | eukaryotic translation initiation factor 3 complex(GO:0005852) |
0.0 | 1.7 | GO:0034704 | calcium channel complex(GO:0034704) |
0.0 | 0.1 | GO:0032777 | Piccolo NuA4 histone acetyltransferase complex(GO:0032777) |
0.0 | 0.8 | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex(GO:0080008) |
0.0 | 0.7 | GO:0005921 | gap junction(GO:0005921) |
0.0 | 0.5 | GO:0032040 | small-subunit processome(GO:0032040) |
0.0 | 1.5 | GO:0000118 | histone deacetylase complex(GO:0000118) |
0.0 | 2.2 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.0 | 1.3 | GO:0016363 | nuclear matrix(GO:0016363) |
0.0 | 0.7 | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex(GO:0000307) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.1 | 14.7 | GO:0017050 | sphinganine kinase activity(GO:0008481) D-erythro-sphingosine kinase activity(GO:0017050) |
1.0 | 3.1 | GO:0017084 | glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350) delta1-pyrroline-5-carboxylate synthetase activity(GO:0017084) amino acid kinase activity(GO:0019202) |
0.7 | 2.0 | GO:0004051 | arachidonate 5-lipoxygenase activity(GO:0004051) |
0.5 | 5.2 | GO:0001609 | G-protein coupled adenosine receptor activity(GO:0001609) |
0.4 | 2.0 | GO:0001875 | lipopolysaccharide receptor activity(GO:0001875) |
0.4 | 3.4 | GO:0003910 | DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910) |
0.2 | 0.8 | GO:0032217 | riboflavin transporter activity(GO:0032217) |
0.2 | 2.9 | GO:0002162 | dystroglycan binding(GO:0002162) |
0.1 | 1.4 | GO:0001730 | 2'-5'-oligoadenylate synthetase activity(GO:0001730) |
0.1 | 10.8 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.1 | 0.5 | GO:0042134 | rRNA primary transcript binding(GO:0042134) |
0.1 | 1.7 | GO:0005545 | 1-phosphatidylinositol binding(GO:0005545) |
0.1 | 4.2 | GO:0045182 | translation regulator activity(GO:0045182) |
0.1 | 3.7 | GO:0005070 | SH3/SH2 adaptor activity(GO:0005070) |
0.1 | 1.6 | GO:0099604 | calcium-release channel activity(GO:0015278) ligand-gated calcium channel activity(GO:0099604) |
0.1 | 0.5 | GO:0070181 | small ribosomal subunit rRNA binding(GO:0070181) |
0.1 | 0.5 | GO:0019788 | NEDD8 transferase activity(GO:0019788) |
0.1 | 1.6 | GO:0015026 | coreceptor activity(GO:0015026) |
0.1 | 11.9 | GO:0008201 | heparin binding(GO:0008201) |
0.1 | 2.0 | GO:0000062 | fatty-acyl-CoA binding(GO:0000062) |
0.1 | 1.3 | GO:0034237 | protein kinase A regulatory subunit binding(GO:0034237) |
0.1 | 0.8 | GO:0038191 | neuropilin binding(GO:0038191) |
0.1 | 1.5 | GO:0015215 | nucleotide transmembrane transporter activity(GO:0015215) |
0.0 | 0.9 | GO:0008253 | 5'-nucleotidase activity(GO:0008253) |
0.0 | 0.7 | GO:0001618 | virus receptor activity(GO:0001618) |
0.0 | 0.3 | GO:0008239 | dipeptidyl-peptidase activity(GO:0008239) |
0.0 | 2.9 | GO:0017048 | Rho GTPase binding(GO:0017048) |
0.0 | 6.6 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.0 | 2.2 | GO:0005262 | calcium channel activity(GO:0005262) |
0.0 | 0.7 | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538) |
0.0 | 0.3 | GO:0005149 | interleukin-1 receptor binding(GO:0005149) |
0.0 | 0.3 | GO:0003887 | DNA-directed DNA polymerase activity(GO:0003887) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 14.7 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.2 | 11.9 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.1 | 3.9 | PID IL27 PATHWAY | IL27-mediated signaling events |
0.1 | 4.5 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.6 | SIG BCR SIGNALING PATHWAY | Members of the BCR signaling pathway |
0.0 | 3.7 | PID PDGFRB PATHWAY | PDGFR-beta signaling pathway |
0.0 | 1.4 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.0 | 1.7 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 11.9 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.3 | 14.7 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.3 | 5.2 | REACTOME NUCLEOTIDE LIKE PURINERGIC RECEPTORS | Genes involved in Nucleotide-like (purinergic) receptors |
0.2 | 3.4 | REACTOME PROCESSIVE SYNTHESIS ON THE LAGGING STRAND | Genes involved in Processive synthesis on the lagging strand |
0.1 | 3.1 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.1 | 3.3 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.1 | 0.9 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |
0.0 | 0.5 | REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |
0.0 | 5.4 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.0 | 0.8 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 1.4 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.0 | 0.7 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |