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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G61620

Z-value: 1.03

Transcription factors associated with AT5G61620

Gene Symbol Gene ID Gene Info
AT5G61620
AT5G61620 myb-like transcription factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT5G61620arTal_v1_Chr5_+_24772326_24772326-0.115.9e-01Click!

Activity profile of AT5G61620 motif

Sorted Z-values of AT5G61620 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_4312103 2.72 AT2G10940.2
AT2G10940.1
AT2G10940
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_9072708 2.28 AT5G25980.2
AT5G25980.1
AT5G25980.3
TGG2
glucoside glucohydrolase 2
Chr5_+_8863224 2.15 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
Chr1_-_4682309 2.12 AT1G13650.3
AT1G13650.4
AT1G13650.2
AT1G13650.1
AT1G13650
hypothetical protein
Chr3_-_197974 1.97 AT3G01500.1
CA1
carbonic anhydrase 1
Chr3_-_198664 1.96 AT3G01500.3
CA1
carbonic anhydrase 1
Chr3_-_198160 1.96 AT3G01500.2
CA1
carbonic anhydrase 1
Chr3_-_197564 1.91 AT3G01500.4
CA1
carbonic anhydrase 1
Chr1_-_29635931 1.84 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr3_-_21523375 1.78 AT3G58120.2
AT3G58120.1
BZIP61
Basic-leucine zipper (bZIP) transcription factor family protein
Chr2_+_14577083 1.67 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
Chr3_-_7557969 1.67 AT3G21460.1
AT3G21460
Glutaredoxin family protein
Chr1_-_20648891 1.63 AT1G55330.1
AGP21
arabinogalactan protein 21
Chr2_+_16130290 1.62 AT2G38540.1
LP1
lipid transfer protein 1
Chr5_-_15378416 1.61 AT5G38410.3
AT5G38410.2
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr5_-_15378642 1.61 AT5G38410.1
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr2_+_2763449 1.59 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr5_-_19648362 1.57 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_23266227 1.56 AT3G62950.1
AT3G62950
Thioredoxin superfamily protein
Chr1_-_4394343 1.55 AT1G12900.3
AT1G12900.4
AT1G12900.1
AT1G12900.2
AT1G12900.5
GAPA-2
glyceraldehyde 3-phosphate dehydrogenase A subunit 2
Chr4_+_13391293 1.55 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr1_-_4090857 1.54 AT1G12090.1
ELP
extensin-like protein
Chr5_+_4757856 1.53 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
Chr4_+_13390754 1.52 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr3_+_1695156 1.52 AT3G05730.1
AT3G05730
defensin-like protein
Chr3_-_11013451 1.50 AT3G29030.1
EXPA5
expansin A5
Chr5_-_15382071 1.47 AT5G38420.1
RBCS2B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr4_-_17355891 1.42 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr5_+_4758921 1.42 AT5G14740.9
CA2
carbonic anhydrase 2
Chr1_+_10371675 1.37 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_22038165 1.33 AT5G54270.1
LHCB3
light-harvesting chlorophyll B-binding protein 3
Chr3_-_16448844 1.31 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr1_-_10475969 1.28 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
Chr2_+_16476198 1.26 AT2G39470.1
AT2G39470.2
AT2G39470.3
PnsL1
PsbP-like protein 2
Chr5_+_426226 1.26 AT5G02160.1
AT5G02160
transmembrane protein
Chr2_+_9636346 1.23 AT2G22670.1
AT2G22670.4
AT2G22670.2
AT2G22670.5
AT2G22670.3
IAA8
indoleacetic acid-induced protein 8
Chr3_-_4744263 1.23 AT3G14240.1
AT3G14240
Subtilase family protein
Chr3_+_251868 1.23 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
Chr4_+_620691 1.21 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_-_7531108 1.21 AT1G21500.1
AT1G21500
hypothetical protein
Chr2_-_1800472 1.21 AT2G05070.1
LHCB2.2
photosystem II light harvesting complex protein 2.2
Chr1_+_25401514 1.20 AT1G67750.1
AT1G67750
Pectate lyase family protein
Chr3_-_15617149 1.18 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_7026533 1.18 AT5G20740.1
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_-_7026753 1.17 AT5G20740.2
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr2_+_17854557 1.16 AT2G42900.1
AT2G42900
Plant basic secretory protein (BSP) family protein
Chr2_-_15137012 1.16 AT2G36050.1
OFP15
ovate family protein 15
Chr3_-_15617309 1.16 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_2334185 1.16 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
Chr3_+_5358601 1.16 AT3G15850.1
FAD5
fatty acid desaturase 5
Chr4_-_16583075 1.15 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
Chr1_-_27853233 1.15 AT1G74070.2
AT1G74070.1
AT1G74070
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr3_-_19595834 1.15 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr5_+_19825078 1.14 AT5G48900.1
AT5G48900
Pectin lyase-like superfamily protein
Chr4_+_17243583 1.14 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr3_-_9492655 1.13 AT3G25920.1
RPL15
ribosomal protein L15
Chr1_+_7886323 1.13 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_28423520 1.11 AT1G75690.1
LQY1
DnaJ/Hsp40 cysteine-rich domain superfamily protein
Chr4_+_6100714 1.11 AT4G09650.1
ATPD
F-type H+-transporting ATPase subunit delta
Chr5_-_23308680 1.11 AT5G57560.1
TCH4
Xyloglucan endotransglucosylase/hydrolase family protein
Chr2_-_17837618 1.11 AT2G42870.1
PAR1
phy rapidly regulated 1
Chr5_-_20712386 1.10 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
AT5G50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_+_13388290 1.09 AT4G26520.2
AT4G26520.1
AT4G26520.3
FBA7
Aldolase superfamily protein
Chr4_-_13398307 1.08 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
Chr3_+_18514266 1.08 AT3G49940.1
LBD38
LOB domain-containing protein 38
Chr5_-_25629615 1.08 AT5G64040.2
AT5G64040.1
PSAN
photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
Chr2_-_8913747 1.08 AT2G20670.1
AT2G20670
sugar phosphate exchanger, putative (DUF506)
Chr3_-_8623214 1.07 AT3G23880.1
AT3G23880
F-box and associated interaction domains-containing protein
Chr5_+_18530834 1.06 AT5G45680.1
FKBP13
FK506-binding protein 13
Chr1_-_18405493 1.06 AT1G49730.3
AT1G49730.4
AT1G49730.2
AT1G49730.5
AT1G49730.1
AT1G49730
Protein kinase superfamily protein
Chr5_+_5078200 1.05 AT5G15600.1
AT5G15600.2
SP1L4
SPIRAL1-like4
Chr5_+_1919080 1.05 AT5G06290.1
AT5G06290.2
2-Cys Prx B
2-cysteine peroxiredoxin B
Chr4_+_8925571 1.02 AT4G15660.1
AT4G15660
Thioredoxin superfamily protein
Chr4_-_14872267 1.01 AT4G30410.1
AT4G30410.2
AT4G30410
sequence-specific DNA binding transcription factor
Chr1_+_4001113 1.01 AT1G11860.3
AT1G11860.1
AT1G11860.2
AT1G11860
Glycine cleavage T-protein family
Chr4_+_6408007 1.00 AT4G10340.1
LHCB5
light harvesting complex of photosystem II 5
Chr1_-_15607966 1.00 AT1G41830.1
SKS6
SKU5-similar 6
Chr4_+_13388719 1.00 AT4G26520.4
FBA7
Aldolase superfamily protein
Chr1_-_19052582 1.00 AT1G51400.1
AT1G51400
Photosystem II 5 kD protein
Chr2_-_12173951 1.00 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr5_+_25524045 0.99 AT5G63780.2
SHA1
RING/FYVE/PHD zinc finger superfamily protein
Chr1_-_6072129 0.99 AT1G17650.1
AT1G17650.2
GLYR2
glyoxylate reductase 2
Chr1_-_4530222 0.98 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr2_-_16603059 0.98 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr5_-_3183984 0.97 AT5G10150.2
AT5G10150.1
AT5G10150
UPSTREAM OF FLC protein (DUF966)
Chr3_-_23261927 0.97 AT3G62930.1
AT3G62930
Thioredoxin superfamily protein
Chr2_-_7954680 0.96 AT2G18300.1
AT2G18300.3
AT2G18300.2
HBI1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_+_10017321 0.96 AT3G27160.1
AT3G27160.2
GHS1
Ribosomal protein S21 family protein
Chr5_+_25016860 0.96 AT5G62280.1
AT5G62280
DUF1442 family protein (DUF1442)
Chr2_-_16603319 0.95 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr2_-_13797237 0.95 AT2G32500.2
AT2G32500.1
AT2G32500
Stress responsive alpha-beta barrel domain protein
Chr5_+_21020014 0.95 AT5G51750.1
SBT1.3
subtilase 1.3
Chr5_-_3183484 0.94 AT5G10150.3
AT5G10150.4
AT5G10150
UPSTREAM OF FLC protein (DUF966)
Chr2_+_1676999 0.94 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
Chr2_+_1676717 0.94 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
Chr5_-_17581275 0.93 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
Chr3_+_18262290 0.93 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
Chr5_+_25523827 0.93 AT5G63780.1
SHA1
RING/FYVE/PHD zinc finger superfamily protein
Chr2_+_1033598 0.93 AT2G03410.1
AT2G03410
Mo25 family protein
Chr1_+_898480 0.93 AT1G03600.1
PSB27
photosystem II family protein
Chr1_+_5058583 0.92 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
Chr3_+_8194606 0.92 AT3G23050.1
AT3G23050.3
AT3G23050.2
IAA7
indole-3-acetic acid 7
Chr5_+_6457026 0.92 AT5G19190.1
AT5G19190
hypothetical protein
Chr2_+_15059763 0.90 AT2G35860.1
FLA16
FASCICLIN-like arabinogalactan protein 16 precursor
Chr4_-_7591259 0.90 AT4G12980.1
AT4G12980
Auxin-responsive family protein
Chr4_+_16357421 0.90 AT4G34160.1
CYCD3%3B1
CYCLIN D3;1
Chr3_+_2717557 0.89 AT3G08940.2
AT3G08940.1
LHCB4.2
light harvesting complex photosystem II
Chr2_+_18070960 0.89 AT2G43535.1
AT2G43535
Scorpion toxin-like knottin superfamily protein
Chr3_+_188321 0.89 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
Chr4_-_16384468 0.89 AT4G34220.1
AT4G34220
Leucine-rich repeat protein kinase family protein
Chr1_+_24229063 0.89 AT1G65230.1
AT1G65230
transmembrane protein, putative (DUF2358)
Chr4_+_13725546 0.88 AT4G27440.2
AT4G27440.1
PORB
protochlorophyllide oxidoreductase B
Chr1_-_26515188 0.88 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr5_+_5907775 0.88 AT5G17870.1
PSRP6
plastid-specific 50S ribosomal protein 6
Chr3_+_1727151 0.88 AT3G05800.1
AIF1
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
Chr5_+_5907589 0.87 AT5G17870.2
PSRP6
plastid-specific 50S ribosomal protein 6
Chr3_-_17910736 0.87 AT3G48360.3
AT3G48360.1
AT3G48360.2
BT2
BTB and TAZ domain protein 2
Chr4_+_11907355 0.87 AT4G22620.1
AT4G22620
SAUR-like auxin-responsive protein family
Chr5_-_6976036 0.85 AT5G20630.1
GER3
germin 3
Chr4_+_16591179 0.85 AT4G34770.1
AT4G34770
SAUR-like auxin-responsive protein family
Chr1_+_11532199 0.84 AT1G32060.1
PRK
phosphoribulokinase
Chr1_+_17065858 0.83 AT1G45130.2
BGAL5
beta-galactosidase 5
Chr4_-_13958107 0.83 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_21109414 0.82 AT3G57040.1
ARR9
response regulator 9
Chr2_-_1824480 0.82 AT2G05100.1
AT2G05100.2
LHCB2.1
photosystem II light harvesting complex protein 2.1
Chr5_+_208866 0.82 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
Chr1_+_10477885 0.82 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
Chr1_+_22444307 0.82 AT1G60950.1
FED A
2Fe-2S ferredoxin-like superfamily protein
Chr1_+_17065111 0.82 AT1G45130.1
BGAL5
beta-galactosidase 5
Chr2_-_7768040 0.81 AT2G17880.1
AT2G17880
Chaperone DnaJ-domain superfamily protein
Chr1_+_24149208 0.80 AT1G65010.1
AT1G65010
WEB family protein (DUF827)
Chr3_-_17495033 0.80 AT3G47470.1
LHCA4
light-harvesting chlorophyll-protein complex I subunit A4
Chr2_-_18443405 0.80 AT2G44740.1
CYCP4%3B1
cyclin p4;1
Chr1_+_18802552 0.80 AT1G50732.1
AT1G50732
transmembrane protein
Chr3_-_7377186 0.80 AT3G21055.1
AT3G21055.2
PSBTN
photosystem II subunit T
Chr1_+_29413874 0.80 AT1G78170.1
AT1G78170
E3 ubiquitin-protein ligase
Chr3_+_21109059 0.79 AT3G57040.2
ARR9
response regulator 9
Chr1_-_29643535 0.79 AT1G78850.1
AT1G78850
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr5_+_22175461 0.79 AT5G54585.1
AT5G54585
hypothetical protein
Chr1_+_4899045 0.79 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
Chr2_+_10667898 0.79 AT2G25080.1
GPX1
glutathione peroxidase 1
Chr2_-_12277417 0.79 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr5_+_7222179 0.78 AT5G21430.1
AT5G21430.2
NdhU
Chaperone DnaJ-domain superfamily protein
Chr3_+_4510965 0.78 AT3G13750.1
BGAL1
beta galactosidase 1
Chr2_+_1594588 0.78 AT2G04570.1
AT2G04570
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_10188981 0.78 AT4G18440.1
AT4G18440
L-Aspartase-like family protein
Chr2_-_2588448 0.78 AT2G06520.1
PSBX
photosystem II subunit X
Chr3_+_2167730 0.77 AT3G06868.1
AT3G06868
vitellogenin-like protein
Chr5_+_6833564 0.77 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
Chr2_+_11550705 0.77 AT2G27060.1
AT2G27060.2
AT2G27060.3
AT2G27060
Leucine-rich repeat protein kinase family protein
Chr1_-_19454697 0.77 AT1G52220.3
AT1G52220.2
AT1G52220.4
AT1G52220.1
AT1G52220
CURVATURE THYLAKOID protein
Chr2_+_14216771 0.77 AT2G33570.1
GALS1
glycosyltransferase family protein (DUF23)
Chr5_+_22716917 0.77 AT5G56100.1
AT5G56100
glycine-rich protein / oleosin
Chr2_+_12254888 0.76 AT2G28605.1
AT2G28605
Photosystem II reaction center PsbP family protein
Chr1_-_23137254 0.76 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_-_9157133 0.76 AT4G16155.1
AT4G16155
dihydrolipoamide dehydrogenase
Chr4_-_8350030 0.75 AT4G14550.4
IAA14
indole-3-acetic acid inducible 14
Chr1_-_22317070 0.75 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr2_-_15725022 0.75 AT2G37450.2
AT2G37450.3
AT2G37450.1
UMAMIT13
nodulin MtN21 /EamA-like transporter family protein
Chr1_+_27991165 0.75 AT1G74470.1
AT1G74470
Pyridine nucleotide-disulfide oxidoreductase family protein
Chr3_+_2347186 0.75 AT3G07350.1
AT3G07350
sulfate/thiosulfate import ATP-binding protein, putative (DUF506)
Chr2_-_12277245 0.75 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
Chr3_+_19342014 0.75 AT3G52150.1
AT3G52150.2
PSRP2
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr4_-_7893727 0.74 AT4G13575.1
AT4G13575.2
AT4G13575
hypothetical protein
Chr1_+_11349697 0.74 AT1G31710.1
AT1G31710
Copper amine oxidase family protein
Chr1_+_26964087 0.74 AT1G71695.1
AT1G71695
Peroxidase superfamily protein
Chr3_-_5469594 0.74 AT3G16140.1
PSAH-1
photosystem I subunit H-1
Chr5_+_6387341 0.74 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
AT5G19090
Heavy metal transport/detoxification superfamily protein
Chr5_-_9242854 0.73 AT5G26330.1
AT5G26330
Cupredoxin superfamily protein
Chr5_+_8365601 0.73 AT5G24490.1
AT5G24490
30S ribosomal protein
Chr4_-_8350263 0.72 AT4G14550.1
AT4G14550.2
AT4G14550.3
IAA14
indole-3-acetic acid inducible 14
Chr3_+_10505711 0.72 AT3G28180.1
CSLC04
Cellulose-synthase-like C4
Chr5_+_18894378 0.72 AT5G46570.1
BSK2
BR-signaling kinase 2
Chr1_+_18290942 0.71 AT1G49430.1
AT1G49430.2
LACS2
long-chain acyl-CoA synthetase 2
Chr4_-_947075 0.71 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
Chr1_+_11396402 0.71 AT1G31800.1
CYP97A3
cytochrome P450, family 97, subfamily A, polypeptide 3
Chr2_-_13020311 0.71 AT2G30570.1
PSBW
photosystem II reaction center W
Chr5_+_1130031 0.71 AT5G04140.2
GLU1
glutamate synthase 1
Chr4_-_17640925 0.71 AT4G37540.1
LBD39
LOB domain-containing protein 39
Chr5_+_1129785 0.71 AT5G04140.1
GLU1
glutamate synthase 1
Chr2_+_15765698 0.71 AT2G37585.1
AT2G37585
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr3_+_19713799 0.70 AT3G53190.1
AT3G53190
Pectin lyase-like superfamily protein
Chr2_-_8525238 0.70 AT2G19780.1
AT2G19780
Leucine-rich repeat (LRR) family protein
Chr2_+_17894796 0.70 AT2G43030.1
AT2G43030
Ribosomal protein L3 family protein
Chr1_-_25649254 0.70 AT1G68400.1
AT1G68400
leucine-rich repeat transmembrane protein kinase family protein
Chr1_-_28581315 0.70 AT1G76160.1
sks5
SKU5 similar 5
Chr2_-_7496292 0.69 AT2G17230.1
EXL5
EXORDIUM like 5
Chr4_+_7521257 0.69 AT4G12800.2
AT4G12800.1
PSAL
photosystem I subunit l
Chr1_+_20963686 0.69 AT1G56050.1
AT1G56050
GTP-binding protein-like protein
Chr5_+_18697235 0.69 AT5G46110.2
AT5G46110.1
AT5G46110.3
AT5G46110.4
APE2
Glucose-6-phosphate/phosphate translocator-like protein
Chr5_+_1765390 0.69 AT5G05860.1
UGT76C2
UDP-glucosyl transferase 76C2
Chr2_-_5776289 0.69 AT2G13820.2
AT2G13820.1
AT2G13820.3
XYP2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_21070356 0.68 AT3G56910.1
PSRP5
plastid-specific 50S ribosomal protein 5
Chr1_+_28327698 0.68 AT1G75460.1
AT1G75460
ATP-dependent protease La (LON) domain protein
Chr5_+_16151772 0.68 AT5G40380.3
AT5G40380.2
CRK42
cysteine-rich RLK (RECEPTOR-like protein kinase) 42
Chr3_-_22984566 0.67 AT3G62070.1
AT3G62070
hypothetical protein
Chr4_+_12376122 0.67 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
Chr1_-_29513100 0.67 AT1G78440.1
ATGA2OX1
gibberellin 2-beta-dioxygenase
Chr1_+_22699715 0.67 AT1G61520.3
LHCA3
PSI type III chlorophyll a/b-binding protein
Chr3_-_5297851 0.67 AT3G15630.1
AT3G15630
plant/protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G61620

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 10.0 GO:0015976 carbon utilization(GO:0015976)
0.6 3.4 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.5 8.7 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.4 1.8 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.4 1.2 GO:0009234 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.4 1.1 GO:0048872 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.3 1.9 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.3 2.5 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.3 0.9 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.3 0.9 GO:0035404 histone-serine phosphorylation(GO:0035404) histone H3-S10 phosphorylation(GO:0043987)
0.3 4.8 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.3 1.1 GO:1902292 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.3 3.1 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.3 0.8 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.3 3.6 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.3 1.5 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.2 0.7 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.2 0.7 GO:0035436 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.2 0.7 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.7 GO:0071258 cellular response to gravity(GO:0071258)
0.2 2.4 GO:0010206 photosystem II repair(GO:0010206)
0.2 0.7 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.2 0.7 GO:0090143 nucleoid organization(GO:0090143)
0.2 1.5 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.2 1.0 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.2 0.8 GO:0080003 thalianol metabolic process(GO:0080003)
0.2 1.0 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.2 3.6 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.2 0.4 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.2 0.7 GO:0016139 glycoside catabolic process(GO:0016139)
0.2 0.8 GO:1901562 response to paraquat(GO:1901562)
0.2 0.5 GO:0009915 phloem sucrose loading(GO:0009915)
0.2 0.8 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 0.5 GO:0035444 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.2 0.5 GO:0071457 cellular response to ozone(GO:0071457)
0.2 0.5 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 0.5 GO:0034389 lipid particle organization(GO:0034389)
0.2 0.5 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.2 1.5 GO:0010088 phloem development(GO:0010088)
0.1 0.4 GO:0032409 regulation of transporter activity(GO:0032409)
0.1 1.2 GO:1905156 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155) negative regulation of photosynthesis(GO:1905156)
0.1 1.0 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.1 0.4 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.1 1.3 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.1 0.7 GO:0042549 photosystem II stabilization(GO:0042549)
0.1 0.8 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.1 0.6 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.4 GO:1900364 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.1 0.4 GO:0090549 response to carbon starvation(GO:0090549)
0.1 0.4 GO:0010454 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of cell fate commitment(GO:0010454) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.1 0.5 GO:0006097 glyoxylate cycle(GO:0006097)
0.1 0.8 GO:0009643 photosynthetic acclimation(GO:0009643)
0.1 0.5 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.1 0.4 GO:0006148 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.1 0.1 GO:0007063 regulation of sister chromatid cohesion(GO:0007063)
0.1 0.7 GO:0006788 heme oxidation(GO:0006788)
0.1 0.6 GO:0010451 regulation of floral meristem growth(GO:0010080) floral meristem growth(GO:0010451)
0.1 0.9 GO:0006821 chloride transport(GO:0006821)
0.1 0.2 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.1 0.5 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.4 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.2 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.1 0.3 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.1 0.6 GO:0007266 Rho protein signal transduction(GO:0007266)
0.1 0.9 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 0.4 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 0.7 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.7 GO:1901001 negative regulation of response to water deprivation(GO:0080148) negative regulation of response to salt stress(GO:1901001)
0.1 0.7 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 2.4 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.7 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.1 0.7 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 0.4 GO:0046398 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203) UDP-glucuronate metabolic process(GO:0046398)
0.1 1.0 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 0.3 GO:0045827 negative regulation of isoprenoid metabolic process(GO:0045827)
0.1 0.3 GO:2000011 regulation of multicellular organism growth(GO:0040014) sepal giant cell differentiation(GO:0090392) regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 0.4 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 0.3 GO:0035461 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.1 0.7 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.1 0.3 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.1 0.6 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 0.4 GO:0071836 nectar secretion(GO:0071836)
0.1 0.4 GO:1901271 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.1 1.3 GO:0055069 zinc ion homeostasis(GO:0055069)
0.1 0.4 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.1 0.4 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.1 3.8 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 0.6 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.4 GO:0019310 inositol catabolic process(GO:0019310)
0.1 1.9 GO:0060429 epithelium development(GO:0060429)
0.1 0.2 GO:0036292 DNA rewinding(GO:0036292)
0.1 0.2 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.1 0.4 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.2 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 0.2 GO:0034764 positive regulation of transmembrane transport(GO:0034764) regulation of protein import into chloroplast stroma(GO:1904215)
0.1 1.0 GO:0032544 plastid translation(GO:0032544)
0.1 0.2 GO:0043132 NAD transport(GO:0043132)
0.1 2.7 GO:0042335 cuticle development(GO:0042335)
0.1 8.1 GO:0015979 photosynthesis(GO:0015979)
0.1 1.9 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.1 0.5 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.1 0.4 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 1.0 GO:0070828 heterochromatin organization(GO:0070828)
0.1 0.1 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.1 0.7 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.1 0.4 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.1 0.2 GO:1902932 positive regulation of alcohol biosynthetic process(GO:1902932)
0.1 0.4 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.4 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.9 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.1 0.3 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.1 0.5 GO:0010018 far-red light signaling pathway(GO:0010018)
0.1 0.3 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 1.1 GO:0044070 regulation of anion transport(GO:0044070)
0.1 1.0 GO:0009299 mRNA transcription(GO:0009299)
0.1 0.3 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.6 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.1 1.6 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.1 0.2 GO:0006272 leading strand elongation(GO:0006272)
0.1 2.5 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 0.7 GO:0030497 fatty acid elongation(GO:0030497)
0.1 1.0 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.1 0.2 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.1 1.5 GO:0009612 response to mechanical stimulus(GO:0009612)
0.1 0.2 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.1 0.4 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.1 0.3 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.1 0.7 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 0.3 GO:0045912 negative regulation of carbohydrate metabolic process(GO:0045912)
0.1 0.8 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 0.8 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 0.2 GO:0006741 NADP biosynthetic process(GO:0006741)
0.1 0.1 GO:0010269 response to selenium ion(GO:0010269)
0.1 0.2 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.1 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.1 0.4 GO:0043271 negative regulation of ion transport(GO:0043271)
0.1 0.2 GO:0042407 mitochondrial protein processing(GO:0034982) cristae formation(GO:0042407)
0.1 0.3 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.3 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.1 2.6 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.3 GO:0006013 mannose metabolic process(GO:0006013)
0.1 2.3 GO:0048825 cotyledon development(GO:0048825)
0.1 0.6 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 1.0 GO:0010025 wax biosynthetic process(GO:0010025)
0.0 1.4 GO:0030050 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.2 GO:0009305 protein biotinylation(GO:0009305)
0.0 0.1 GO:2001293 malonyl-CoA metabolic process(GO:2001293)
0.0 0.2 GO:0001112 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.0 0.6 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.0 4.2 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.4 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 1.3 GO:0009686 gibberellin biosynthetic process(GO:0009686)
0.0 0.0 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.0 0.2 GO:0007142 male meiosis II(GO:0007142)
0.0 0.1 GO:0055089 fatty acid homeostasis(GO:0055089)
0.0 0.5 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.0 0.2 GO:0046479 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.0 0.7 GO:0046501 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 1.1 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.0 1.1 GO:0019915 lipid storage(GO:0019915)
0.0 0.3 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.0 0.4 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 3.0 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.3 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.0 0.2 GO:0010185 regulation of cellular defense response(GO:0010185)
0.0 0.2 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.0 0.3 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.1 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.0 0.4 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 1.6 GO:0016485 protein processing(GO:0016485)
0.0 2.0 GO:0035825 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0 0.1 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.2 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.0 0.2 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.2 GO:0046683 response to organophosphorus(GO:0046683)
0.0 0.3 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 2.1 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.3 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 2.4 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.3 GO:2000104 negative regulation of DNA-dependent DNA replication(GO:2000104)
0.0 0.4 GO:0080086 stamen filament development(GO:0080086)
0.0 0.5 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.2 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.0 0.1 GO:0035627 ceramide transport(GO:0035627)
0.0 0.1 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 0.3 GO:0036065 fucosylation(GO:0036065)
0.0 0.2 GO:1904961 quiescent center organization(GO:1904961)
0.0 0.2 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0 0.9 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.3 GO:1902025 nitrate import(GO:1902025)
0.0 0.1 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.2 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.2 GO:0048446 petal morphogenesis(GO:0048446)
0.0 2.0 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.2 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.3 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.1 GO:0042539 hypotonic salinity response(GO:0042539)
0.0 0.3 GO:0009641 shade avoidance(GO:0009641)
0.0 0.1 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 0.2 GO:0016584 nucleosome positioning(GO:0016584)
0.0 0.4 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.4 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.1 GO:0080171 lytic vacuole organization(GO:0080171)
0.0 0.3 GO:0046785 microtubule polymerization(GO:0046785)
0.0 0.2 GO:0015706 nitrate transport(GO:0015706)
0.0 0.0 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.0 0.1 GO:1903321 negative regulation of protein modification by small protein conjugation or removal(GO:1903321)
0.0 0.3 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.4 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 0.3 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.4 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.3 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.3 GO:0046688 response to copper ion(GO:0046688)
0.0 0.3 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.1 GO:1901371 regulation of shoot system morphogenesis(GO:1900618) regulation of leaf morphogenesis(GO:1901371) regulation of organ morphogenesis(GO:2000027)
0.0 0.1 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.0 0.2 GO:0043171 peptide catabolic process(GO:0043171)
0.0 1.0 GO:0010101 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.0 1.3 GO:0043401 brassinosteroid mediated signaling pathway(GO:0009742) steroid hormone mediated signaling pathway(GO:0043401) response to steroid hormone(GO:0048545) cellular response to steroid hormone stimulus(GO:0071383)
0.0 0.1 GO:0010196 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.0 0.4 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 1.6 GO:0006869 lipid transport(GO:0006869)
0.0 0.1 GO:1900034 regulation of cellular response to heat(GO:1900034)
0.0 0.3 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.3 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 0.3 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.1 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 1.2 GO:0009875 pollen-pistil interaction(GO:0009875)
0.0 0.4 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.2 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.2 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.0 0.3 GO:0006006 glucose metabolic process(GO:0006006)
0.0 0.1 GO:0006783 heme biosynthetic process(GO:0006783)
0.0 0.5 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 0.6 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.1 GO:0009819 drought recovery(GO:0009819)
0.0 0.1 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.0 0.1 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.0 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.0 0.2 GO:0006739 NADP metabolic process(GO:0006739)
0.0 0.3 GO:0009638 phototropism(GO:0009638)
0.0 0.3 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.3 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 0.1 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.0 0.2 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.2 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.1 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.0 0.2 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 0.1 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.2 GO:0015986 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.0 0.1 GO:0044211 CTP salvage(GO:0044211)
0.0 0.3 GO:0010449 root meristem growth(GO:0010449)
0.0 0.2 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.1 GO:0009306 protein secretion(GO:0009306)
0.0 0.5 GO:0048278 membrane docking(GO:0022406) vesicle docking(GO:0048278)
0.0 0.1 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.1 GO:0009750 response to fructose(GO:0009750)
0.0 0.1 GO:2001289 lipid X metabolic process(GO:2001289)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 4.3 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.4 1.1 GO:0030093 chloroplast photosystem I(GO:0030093)
0.3 13.7 GO:0010319 stromule(GO:0010319)
0.2 1.0 GO:0016461 unconventional myosin complex(GO:0016461)
0.2 1.9 GO:0009538 photosystem I reaction center(GO:0009538)
0.2 0.9 GO:0032133 chromosome passenger complex(GO:0032133)
0.2 0.6 GO:0009522 photosystem I(GO:0009522)
0.2 3.2 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.2 0.7 GO:0070505 pollen coat(GO:0070505)
0.2 0.8 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.2 1.1 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.2 0.5 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.1 0.6 GO:0010330 cellulose synthase complex(GO:0010330)
0.1 0.4 GO:0005712 chiasma(GO:0005712)
0.1 6.1 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.1 1.5 GO:0009523 photosystem II(GO:0009523)
0.1 0.4 GO:0070382 exocytic vesicle(GO:0070382)
0.1 29.2 GO:0009535 chloroplast thylakoid membrane(GO:0009535)
0.1 1.1 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 8.8 GO:0009534 chloroplast thylakoid(GO:0009534)
0.1 0.5 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 0.3 GO:0051233 spindle midzone(GO:0051233)
0.1 1.0 GO:0042555 MCM complex(GO:0042555)
0.1 2.3 GO:0055028 cortical microtubule(GO:0055028)
0.1 5.8 GO:0009579 thylakoid(GO:0009579)
0.1 0.2 GO:1990298 bub1-bub3 complex(GO:1990298)
0.1 0.4 GO:0071818 BAT3 complex(GO:0071818)
0.1 0.3 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 0.7 GO:0045298 tubulin complex(GO:0045298)
0.1 0.5 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.2 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 6.6 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.2 GO:0009513 etioplast(GO:0009513)
0.0 0.3 GO:0005784 Sec61 translocon complex(GO:0005784)
0.0 0.3 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.6 GO:0009574 preprophase band(GO:0009574)
0.0 0.9 GO:0005871 kinesin complex(GO:0005871)
0.0 0.5 GO:0009986 cell surface(GO:0009986)
0.0 0.2 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.0 0.2 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 7.6 GO:0048046 apoplast(GO:0048046)
0.0 5.9 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.2 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 0.5 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.3 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.4 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.8 GO:0005875 microtubule associated complex(GO:0005875)
0.0 1.6 GO:0005874 microtubule(GO:0005874)
0.0 0.2 GO:0044545 NSL complex(GO:0044545)
0.0 0.3 GO:0016459 myosin complex(GO:0016459)
0.0 0.4 GO:0000792 heterochromatin(GO:0000792)
0.0 2.2 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.1 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.3 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 0.2 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.1 GO:0000796 condensin complex(GO:0000796)
0.0 6.4 GO:0009532 plastid stroma(GO:0009532)
0.0 0.3 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.1 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.0 0.2 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.1 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 0.1 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.2 GO:0044815 nucleosome(GO:0000786) DNA packaging complex(GO:0044815)
0.0 0.2 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.6 GO:0031201 SNARE complex(GO:0031201)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 4.7 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.7 2.1 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.5 1.5 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.5 1.9 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.5 1.4 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.4 1.7 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.4 10.6 GO:0016168 chlorophyll binding(GO:0016168)
0.4 1.9 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.4 1.1 GO:0015026 coreceptor activity(GO:0015026)
0.3 4.8 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.3 0.3 GO:0045181 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.3 10.4 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.3 0.9 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.3 0.9 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.3 2.2 GO:0019137 thioglucosidase activity(GO:0019137)
0.3 1.3 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.3 0.8 GO:0016842 amidine-lyase activity(GO:0016842)
0.3 1.5 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.2 1.0 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.2 1.0 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.2 0.7 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.2 0.5 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.2 0.7 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.2 0.9 GO:0035174 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.2 0.8 GO:0050162 oxalate oxidase activity(GO:0050162)
0.2 0.8 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.2 1.0 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.2 0.6 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.2 0.4 GO:0009884 cytokinin receptor activity(GO:0009884)
0.2 1.2 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.2 1.7 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.2 0.6 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.2 0.9 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.2 0.9 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.2 4.2 GO:0004565 beta-galactosidase activity(GO:0004565)
0.2 0.7 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.2 1.3 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.2 0.5 GO:0015087 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.2 0.5 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.2 1.3 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.2 0.8 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.2 0.5 GO:0009374 biotin binding(GO:0009374)
0.1 0.7 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.4 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 0.8 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 0.4 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.1 3.4 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 2.7 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 1.2 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744) thiamine pyrophosphate binding(GO:0030976)
0.1 1.0 GO:0042299 lupeol synthase activity(GO:0042299)
0.1 0.7 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 0.5 GO:0004556 alpha-amylase activity(GO:0004556)
0.1 1.4 GO:0008199 ferric iron binding(GO:0008199)
0.1 0.4 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 1.4 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.3 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.1 0.8 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.4 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 2.5 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.3 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 0.3 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.9 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.5 GO:0008430 selenium binding(GO:0008430)
0.1 0.8 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.1 0.6 GO:0031177 phosphopantetheine binding(GO:0031177)
0.1 2.9 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.4 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.1 0.7 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.1 0.3 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422)
0.1 1.0 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.4 GO:0004127 cytidylate kinase activity(GO:0004127)
0.1 0.3 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.1 0.3 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 0.4 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 0.6 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 1.0 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.4 GO:0050113 inositol oxygenase activity(GO:0050113)
0.1 0.2 GO:0042392 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.1 0.4 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.7 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 2.0 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.2 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.1 0.5 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.1 0.2 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 3.1 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.3 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 0.2 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.4 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.1 0.5 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 0.4 GO:0016851 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.1 1.3 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.6 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 1.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.4 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.1 1.3 GO:0035250 UDP-galactosyltransferase activity(GO:0035250)
0.1 0.7 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 0.5 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 1.3 GO:0010333 terpene synthase activity(GO:0010333)
0.1 0.6 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.1 0.2 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 0.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 0.2 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.3 GO:0017048 Rho GTPase binding(GO:0017048)
0.1 0.3 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.2 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 0.2 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.1 0.7 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.1 0.4 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 1.4 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.4 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.2 GO:0018271 biotin-[acetyl-CoA-carboxylase] ligase activity(GO:0004077) biotin-protein ligase activity(GO:0018271)
0.0 0.2 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.4 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.0 0.2 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 1.5 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 2.2 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.8 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 0.7 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.2 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.5 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.4 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.0 0.5 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.9 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.2 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.5 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 3.0 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.5 GO:0004575 sucrose alpha-glucosidase activity(GO:0004575)
0.0 0.1 GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.0 0.3 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.0 0.3 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.0 0.4 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.2 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 0.6 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.2 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.2 GO:0070042 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.2 GO:0051184 cofactor transporter activity(GO:0051184)
0.0 0.1 GO:1902388 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.0 2.2 GO:0008017 microtubule binding(GO:0008017)
0.0 0.1 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.1 GO:0004325 ferrochelatase activity(GO:0004325)
0.0 0.1 GO:0019825 oxygen binding(GO:0019825)
0.0 0.5 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.1 GO:0005344 oxygen transporter activity(GO:0005344)
0.0 0.7 GO:0008143 poly(A) binding(GO:0008143)
0.0 1.9 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 8.2 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 1.4 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.1 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.0 0.3 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 1.1 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.6 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.4 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.3 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.2 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.3 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.8 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.0 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.2 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.0 0.2 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.1 GO:0050815 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.0 1.4 GO:0043621 protein self-association(GO:0043621)
0.0 0.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.3 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.0 0.5 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 2.5 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.2 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.2 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.2 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.2 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.2 GO:0010011 auxin binding(GO:0010011)
0.0 0.4 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.2 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 1.0 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.3 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 0.4 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.2 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.3 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.1 GO:0051117 ATPase binding(GO:0051117)
0.0 0.3 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0 0.1 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.0 0.3 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.2 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.7 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 1.1 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144)
0.0 0.1 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.3 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.0 0.0 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.0 0.3 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.1 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.0 0.1 GO:0004567 beta-mannosidase activity(GO:0004567)
0.0 0.1 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.2 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.6 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.0 0.2 GO:0043138 3'-5' DNA helicase activity(GO:0043138)
0.0 0.6 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 0.2 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.2 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 0.3 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.0 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.0 0.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.0 GO:0005034 osmosensor activity(GO:0005034)
0.0 0.1 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.0 GO:0010331 gibberellin binding(GO:0010331)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 7.9 PID CMYB PATHWAY C-MYB transcription factor network
0.2 0.8 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.2 0.6 PID IL12 2PATHWAY IL12-mediated signaling events
0.2 0.6 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.2 1.6 PID ATR PATHWAY ATR signaling pathway
0.1 0.4 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.1 1.0 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.1 0.2 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.3 PID TELOMERASE PATHWAY Regulation of Telomerase
0.0 0.4 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.5 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.0 0.2 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.1 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 10.8 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.3 2.1 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.3 0.8 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.2 0.9 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.1 1.0 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.4 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 0.4 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.1 0.3 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.1 0.3 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.1 0.4 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.1 0.2 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.1 0.5 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.1 0.3 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.3 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.1 1.2 REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION Genes involved in Influenza Viral RNA Transcription and Replication
0.0 0.1 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.0 0.2 REACTOME SIGNALING BY PDGF Genes involved in Signaling by PDGF
0.0 0.1 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport